+D GENES KO #

  KEGG Orthology (KO) - Candidatus Bipolaricaulis sibiricus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bih00010] D BIP78_0644 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D BIP78_1524 Glucose-6-phosphate isomerase, archaeal II K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_0947 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D BIP78_0323 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D BIP78_0946 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BIP78_0091 Fructose-bisphosphate aldolase/bisphosphatase ancestral bifunctional K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D BIP78_1204 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BIP78_0935 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BIP78_1110 Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal type K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D BIP78_0761 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BIP78_0079 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BIP78_0956 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D BIP78_1132 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1369 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0143 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0190 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1131 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1370 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0141 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0191 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_0498 Acetyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D BIP78_1463 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:bih00020] D BIP78_1178 ATP citrate synthase, beta chain K01648 ACLY; ATP citrate (pro-S)-lyase [EC:2.3.3.8] D BIP78_1177 ATP citrate synthase, alpha chain K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8] D BIP78_1176 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_1132 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1369 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0143 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0190 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1131 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1370 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0141 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0191 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1130 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D BIP78_1372 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D BIP78_0156 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D BIP78_1368 2-oxoglutarate oxidoreductase, delta subunit, putative K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D BIP78_0144 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, delta subunit, ferredoxin-like 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D BIP78_0361 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BIP78_0817 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BIP78_0140 Fumarate hydratase class I, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D BIP78_0139 Fumarate hydratase class I, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D BIP78_0522 Pyruvate carboxylase subunit B (biotin-containing) K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D BIP78_1463 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:bih00030] D BIP78_1524 Glucose-6-phosphate isomerase, archaeal II K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D BIP78_1586 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BIP78_1030 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BIP78_0288 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BIP78_1540 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BIP78_0624 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D BIP78_1094 hypothetical protein K00852 rbsK; ribokinase [EC:2.7.1.15] D BIP78_1497 hypothetical protein K00852 rbsK; ribokinase [EC:2.7.1.15] D BIP78_1630 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BIP78_1227 4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D BIP78_1226 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D BIP78_0186 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D BIP78_0270 Tungsten-containing aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D BIP78_0946 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BIP78_0091 Fructose-bisphosphate aldolase/bisphosphatase ancestral bifunctional K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D BIP78_0323 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_0947 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions D BIP78_1586 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:bih00051] D BIP78_1524 Glucose-6-phosphate isomerase, archaeal II K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_0947 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D BIP78_0323 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D BIP78_0857 Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D BIP78_0946 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BIP78_0091 Fructose-bisphosphate aldolase/bisphosphatase ancestral bifunctional K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D BIP78_1204 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:bih00052] D BIP78_0598 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BIP78_0644 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_0947 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:bih00500] D BIP78_0945 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D BIP78_1217 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21] D BIP78_1012 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BIP78_1011 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D BIP78_0452 Neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D BIP78_0754 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BIP78_0183 Alpha,alpha-trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245] D BIP78_0300 Alpha,alpha-trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245] D BIP78_1067 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D BIP78_0644 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D BIP78_1524 Glucose-6-phosphate isomerase, archaeal II K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bih00520] D BIP78_1135 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BIP78_0004 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BIP78_0513 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BIP78_0592 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BIP78_1631 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BIP78_0864 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BIP78_1558 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BIP78_0591 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D BIP78_0589 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D BIP78_0584 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D BIP78_0644 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D BIP78_0598 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BIP78_1524 Glucose-6-phosphate isomerase, archaeal II K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D BIP78_0945 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:bih00620] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D BIP78_1132 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1369 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0143 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0190 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1131 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1370 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0141 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0191 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0079 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BIP78_0498 Acetyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D BIP78_0937 MBL-fold metallo-hydrolase superfamily K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D BIP78_0138 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D BIP78_0521 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D BIP78_0523 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D BIP78_0522 Pyruvate carboxylase subunit B (biotin-containing) K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D BIP78_0140 Fumarate hydratase class I, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D BIP78_0139 Fumarate hydratase class I, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D BIP78_1463 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BIP78_0956 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bih00630] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_0875 D-3-phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D BIP78_1121 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D BIP78_0293 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BIP78_1041 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BIP78_0515 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D BIP78_0514 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0516 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BIP78_1227 4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D BIP78_0424 Glutamate synthase [NADPH] small chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:bih00640] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_0848 Acetyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D BIP78_0498 Acetyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BIP78_0817 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BIP78_0361 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:bih00650] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_0521 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D BIP78_1132 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1369 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0143 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0190 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1131 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1370 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0141 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0191 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] C 00660 C5-Branched dibasic acid metabolism D BIP78_0817 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BIP78_0361 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:bih00562] D BIP78_0132 Inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BIP78_1204 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bih00190] D BIP78_0422 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D BIP78_1097 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D BIP78_1105 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D BIP78_0423 NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D BIP78_1102 NAD-reducing [NiFe] hydrogenase HoxFUYH(E), subunit gamma (HoxU) K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D BIP78_0651 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BIP78_0649 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BIP78_0650 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BIP78_0652 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BIP78_0627 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BIP78_0655 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BIP78_0653 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BIP78_0654 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BIP78_1410 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bih00710] D BIP78_0935 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BIP78_0946 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BIP78_0323 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D BIP78_1030 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BIP78_1540 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BIP78_1204 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BIP78_1586 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BIP78_0288 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BIP78_1463 Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BIP78_0956 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:bih00720] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D BIP78_0956 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D BIP78_0522 Pyruvate carboxylase subunit B (biotin-containing) K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D BIP78_0140 Fumarate hydratase class I, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D BIP78_0139 Fumarate hydratase class I, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D BIP78_0361 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BIP78_0817 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1132 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1369 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0143 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_0190 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BIP78_1131 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1370 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0141 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_0191 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D BIP78_1130 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D BIP78_1372 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D BIP78_0156 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D BIP78_1368 2-oxoglutarate oxidoreductase, delta subunit, putative K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D BIP78_0144 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, delta subunit, ferredoxin-like 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D BIP78_1176 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BIP78_1178 ATP citrate synthase, beta chain K01648 ACLY; ATP citrate (pro-S)-lyase [EC:2.3.3.8] D BIP78_1177 ATP citrate synthase, alpha chain K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8] D BIP78_1542 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BIP78_1543 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:bih00680] D BIP78_0424 Glutamate synthase [NADPH] small chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D BIP78_1041 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BIP78_0761 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BIP78_0946 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BIP78_0091 Fructose-bisphosphate aldolase/bisphosphatase ancestral bifunctional K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D BIP78_0323 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_0947 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D BIP78_0155 Heterodisulfide reductase subunit A-like protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D BIP78_0147 Heterodisulfide reductase subunit B-like protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D BIP78_0149 Heterodisulfide reductase subunit C-like protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D BIP78_0154 Heterodisulfide reductase subunit D-like protein K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D BIP78_0151 Nickel-dependent hydrogenase, large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D BIP78_0152 hypothetical protein K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D BIP78_1110 Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal type K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D BIP78_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BIP78_0276 hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:bih00910] D BIP78_0730 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D BIP78_0418 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0421 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0293 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BIP78_0905 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D BIP78_1173 Carbonic anhydrase, beta class K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:bih00920] D BIP78_0069 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D BIP78_1384 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BIP78_1385 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D BIP78_0903 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bih00061] D BIP78_1048 Acyl carrier protein K02078 acpP; acyl carrier protein D BIP78_0839 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D BIP78_0840 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BIP78_1223 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0075 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0260 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bih00071] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1223 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0075 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0260 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis D BIP78_1048 Acyl carrier protein K02078 acpP; acyl carrier protein C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bih00561] D BIP78_1455 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D BIP78_1049 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D BIP78_0403 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BIP78_1021 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BIP78_0612 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BIP78_1001 hypothetical protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D BIP78_1417 hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:bih00564] D BIP78_0403 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BIP78_1021 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BIP78_0612 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BIP78_1458 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D BIP78_0710 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D BIP78_1201 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BIP78_1039 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D BIP78_1361 hypothetical protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D BIP78_0559 hypothetical protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bih00230] D BIP78_1380 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BIP78_1630 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BIP78_1032 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BIP78_1623 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D BIP78_1246 hypothetical protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D BIP78_0544 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D BIP78_1624 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D BIP78_0377 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D BIP78_0707 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BIP78_1514 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D BIP78_0007 hypothetical protein K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D BIP78_1315 hypothetical protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D BIP78_0006 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BIP78_0610 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D BIP78_1648 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BIP78_1445 Adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D BIP78_0254 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D BIP78_1195 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D BIP78_1034 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BIP78_0110 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D BIP78_0384 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D BIP78_0688 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BIP78_0873 hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D BIP78_0905 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:bih00240] D BIP78_0044 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BIP78_0043 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BIP78_0042 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D BIP78_0039 Dihydroorotate dehydrogenase (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D BIP78_0040 Dihydroorotate dehydrogenase (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D BIP78_0038 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D BIP78_0041 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BIP78_0520 Uridine monophosphate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BIP78_0707 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BIP78_1165 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D BIP78_1315 hypothetical protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D BIP78_1510 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BIP78_0613 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D BIP78_0480 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D BIP78_0503 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D BIP78_1623 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D BIP78_1246 hypothetical protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D BIP78_0544 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D BIP78_1023 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D BIP78_1489 Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D BIP78_0224 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D BIP78_1648 Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BIP78_1421 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D BIP78_0774 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BIP78_0462 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D BIP78_1420 Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D BIP78_0477 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bih00250] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BIP78_0550 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BIP78_1188 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BIP78_1034 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BIP78_1032 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BIP78_0044 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BIP78_0043 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BIP78_0418 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0421 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0293 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BIP78_0004 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:bih00260] D BIP78_1228 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_1231 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_0381 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_0543 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_0507 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D BIP78_1041 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BIP78_1110 Phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal type K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D BIP78_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BIP78_0276 hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D BIP78_0699 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D BIP78_0515 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D BIP78_0514 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0516 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BIP78_1412 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BIP78_0054 Tryptophan synthase (indole-salvaging) K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:bih00270] D BIP78_1384 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BIP78_1385 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D BIP78_0903 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D BIP78_0706 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BIP78_1090 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D BIP78_1091 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D BIP78_1568 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D BIP78_1081 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D BIP78_0901 hypothetical protein K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-] D BIP78_1115 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BIP78_1412 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BIP78_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:bih00280] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:bih00300] D BIP78_1230 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BIP78_0083 hypothetical protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D BIP78_0494 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BIP78_0815 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:bih00310] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00220 Arginine biosynthesis [PATH:bih00220] D BIP78_0877 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BIP78_0907 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BIP78_1188 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BIP78_0293 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BIP78_0905 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D BIP78_0418 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0421 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:bih00330] D BIP78_1229 hypothetical protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D BIP78_0274 Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D BIP78_0852 N-methylhydantoinase A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D BIP78_0851 N-methylhydantoinase B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D BIP78_1088 Pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D BIP78_1092 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D BIP78_1091 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D BIP78_1090 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:bih00340] D BIP78_0616 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D BIP78_1381 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D BIP78_0615 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D BIP78_1563 Glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] C 00350 Tyrosine metabolism [PATH:bih00350] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BIP78_0966 Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:bih00380] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1357 Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bih00400] D BIP78_0054 Tryptophan synthase (indole-salvaging) K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:bih00410] D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BIP78_0477 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:bih00450] D BIP78_0468 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D BIP78_0076 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D BIP78_0382 Glutamate synthase [NADPH] small chain K12527 ygfK; putative selenate reductase [EC:1.97.1.9] D BIP78_0391 putative hypoxanthine oxidase XdhD K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D BIP78_0809 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0122 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0123 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D BIP78_1041 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bih00470] D BIP78_0233 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BIP78_0485 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BIP78_1562 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:bih00480] D BIP78_0214 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BIP78_1176 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BIP78_1091 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bih00541] D BIP78_0598 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BIP78_0599 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BIP78_1631 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BIP78_0591 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D BIP78_0589 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D BIP78_0584 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:bih00550] D BIP78_0864 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BIP78_1558 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BIP78_1559 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BIP78_1562 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BIP78_0494 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BIP78_0485 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BIP78_0815 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BIP78_0709 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BIP78_0882 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BIP78_1505 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BIP78_1560 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BIP78_1207 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:bih00552] D BIP78_0882 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BIP78_0634 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D BIP78_1417 hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bih00543] D BIP78_1384 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bih00730] D BIP78_0783 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D BIP78_0873 hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D BIP78_0688 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:bih00740] D BIP78_1654 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D BIP78_1585 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BIP78_0102 hypothetical protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D BIP78_1656 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D BIP78_1653 Riboflavin synthase eubacterial/eukaryotic K00793 ribE; riboflavin synthase [EC:2.5.1.9] D BIP78_1364 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D BIP78_1380 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:bih00750] D BIP78_1183 hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D BIP78_1228 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_1231 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_0381 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_0543 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BIP78_0933 Pyridoxal 5'-phosphate synthase (glutamine hydrolyzing), synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D BIP78_0934 Pyridoxal 5'-phosphate synthase (glutamine hydrolyzing), glutaminase subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:bih00760] D BIP78_1453 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D BIP78_1624 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D BIP78_1623 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D BIP78_1246 hypothetical protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D BIP78_0544 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D BIP78_0804 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D BIP78_1554 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D BIP78_1250 ADP-ribose pyrophosphatase of COG1058 family K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D BIP78_1249 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D BIP78_1160 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:bih00770] D BIP78_0314 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D BIP78_1572 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D BIP78_0493 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BIP78_0477 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] C 00780 Biotin metabolism [PATH:bih00780] D BIP78_0840 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BIP78_1224 Serine palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D BIP78_0524 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bih00785] D BIP78_1615 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D BIP78_1614 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D BIP78_1613 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0515 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D BIP78_0514 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D BIP78_0516 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis D BIP78_1654 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] C 00670 One carbon pool by folate [PATH:bih00670] D BIP78_1542 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BIP78_1543 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BIP78_1041 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BIP78_1563 Glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D BIP78_1335 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BIP78_1420 Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bih00860] D BIP78_0880 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BIP78_0188 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bih00130] D BIP78_0623 N-acylamino acid racemase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D BIP78_0895 Trp repressor-binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bih00900] D BIP78_1146 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D BIP78_0614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D BIP78_1242 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D BIP78_1403 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D BIP78_1401 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1406 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BIP78_0709 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:bih00909] D BIP78_1402 Squalene---hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D BIP78_1030 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D BIP78_0599 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D BIP78_0192 Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bih00521] D BIP78_0644 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D BIP78_0132 Inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BIP78_0599 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D BIP78_0644 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D BIP78_0599 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D BIP78_0840 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D BIP78_1048 Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D BIP78_0706 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:bih00362] D BIP78_0521 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D BIP78_1391 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D BIP78_1390 Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D BIP78_1392 Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bih03020] D BIP78_1314 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BIP78_0663 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BIP78_0695 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bih03010] D BIP78_0611 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1 D BIP78_0518 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2 D BIP78_0674 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3 D BIP78_0694 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4 D BIP78_0685 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5 D BIP78_1045 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6 D BIP78_0665 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7 D BIP78_0682 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8 D BIP78_0440 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9 D BIP78_0667 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10 D BIP78_0693 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11 D BIP78_0664 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12 D BIP78_0692 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13 D BIP78_0681 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BIP78_1569 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15 D BIP78_0677 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17 D BIP78_1043 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18 D BIP78_0672 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19 D BIP78_1649 hypothetical protein K02968 RP-S20; small subunit ribosomal protein S20 D BIP78_1311 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1 D BIP78_0671 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2 D BIP78_0668 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3 D BIP78_0669 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4 D BIP78_0680 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5 D BIP78_0683 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6 D BIP78_1313 LSU ribosomal protein L7p/L12p (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12 D BIP78_1141 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9 D BIP78_1312 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10 D BIP78_1310 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11 D BIP78_1036 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13 D BIP78_0678 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14 D BIP78_0686 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15 D BIP78_0675 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16 D BIP78_0696 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17 D BIP78_0684 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18 D BIP78_0777 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19 D BIP78_0801 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20 D BIP78_0808 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21 D BIP78_0673 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22 D BIP78_0670 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23 D BIP78_0679 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24 D BIP78_1629 hypothetical protein K02897 RP-L25; large subunit ribosomal protein L25 D BIP78_0806 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27 D BIP78_1366 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BIP78_0676 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29 D BIP78_0439 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BIP78_1027 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BIP78_1307 hypothetical protein K02913 RP-L33; large subunit ribosomal protein L33 D BIP78_1599 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34 D BIP78_0802 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35 D BIP78_0691 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BIP78_R0043 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BIP78_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bih00970] D BIP78_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BIP78_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BIP78_R0012 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BIP78_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BIP78_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BIP78_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BIP78_R0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BIP78_R0045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BIP78_R0020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BIP78_R0031 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BIP78_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BIP78_R0002 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BIP78_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BIP78_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BIP78_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BIP78_R0007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BIP78_R0036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BIP78_0880 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BIP78_0618 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D BIP78_0772 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BIP78_0975 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BIP78_1047 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BIP78_0755 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BIP78_0090 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BIP78_1215 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BIP78_1056 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BIP78_0809 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0122 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0123 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_1335 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BIP78_0708 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BIP78_0869 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BIP78_1033 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BIP78_0081 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BIP78_0954 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BIP78_0860 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BIP78_1657 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BIP78_1085 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BIP78_0213 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BIP78_0647 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BIP78_1645 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bih03060] D BIP78_0687 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BIP78_1308 hypothetical protein K03073 secE; preprotein translocase subunit SecE D BIP78_1511 hypothetical protein K03075 secG; preprotein translocase subunit SecG D BIP78_1051 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D BIP78_1650 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D BIP78_1052 Protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BIP78_1652 Inner membrane protein translocase and chaperone YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase D BIP78_1521 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BIP78_0216 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BIP78_0955 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D BIP78_0778 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BIP78_0775 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bih04122] D BIP78_1074 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BIP78_1356 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BIP78_1604 hypothetical protein K03636 moaD; sulfur-carrier protein D BIP78_0085 hypothetical protein K03636 moaD; sulfur-carrier protein D BIP78_1532 Molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] C 03050 Proteasome C 03018 RNA degradation [PATH:bih03018] D BIP78_0761 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BIP78_1570 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BIP78_0393 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D BIP78_0862 Transcription termination factor Rho K03628 rho; transcription termination factor Rho D BIP78_0533 Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_1518 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BIP78_0427 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BIP78_0658 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:bih03030] D BIP78_0759 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BIP78_0636 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BIP78_1196 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BIP78_1050 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BIP78_0773 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BIP78_0517 Replicative DNA helicase (DnaB) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BIP78_0938 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BIP78_1044 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BIP78_1029 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BIP78_0395 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BIP78_1600 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BIP78_0630 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bih03410] D BIP78_0702 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BIP78_0316 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BIP78_0016 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D BIP78_1607 Uracil-DNA glycosylase, family 5 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D BIP78_1534 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D BIP78_0484 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BIP78_0630 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bih03420] D BIP78_0268 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BIP78_1286 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BIP78_0047 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BIP78_0974 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BIP78_1005 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BIP78_0630 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bih03430] D BIP78_1261 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D BIP78_0008 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D BIP78_0884 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D BIP78_0974 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BIP78_1005 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BIP78_0077 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BIP78_0078 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BIP78_1044 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BIP78_0759 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BIP78_0773 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BIP78_0636 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BIP78_1050 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BIP78_1196 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BIP78_0630 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bih03440] D BIP78_1044 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BIP78_0626 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D BIP78_0638 Recombination protein RecR K06187 recR; recombination protein RecR D BIP78_1240 RecA protein K03553 recA; recombination protein RecA D BIP78_0220 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D BIP78_1362 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BIP78_1139 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BIP78_1337 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BIP78_0759 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BIP78_0773 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BIP78_0636 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BIP78_1050 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BIP78_1196 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BIP78_1318 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bih02010] D BIP78_0465 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D BIP78_0464 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D BIP78_0408 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D BIP78_1579 hypothetical protein K02011 afuB; iron(III) transport system permease protein D BIP78_0407 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D BIP78_1580 Putrescine transport ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D BIP78_0406 Putrescine transport ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D BIP78_0791 hypothetical protein K02064 thiB; thiamine transport system substrate-binding protein D BIP78_0792 hypothetical protein K02063 thiP; thiamine transport system permease protein D BIP78_0793 hypothetical protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D BIP78_0084 Maltodextrin ABC transporter, ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BIP78_0455 Maltodextrin ABC transporter, substrate-binding protein MdxE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D BIP78_0454 Maltodextrin ABC transporter, permease protein MdxF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BIP78_0453 Maltodextrin ABC transporter, permease protein MdxG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BIP78_0179 Alpha-glucosides-binding periplasmic protein AglE precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein D BIP78_0180 ABC alpha-glucoside transporter, inner membrane subunit AglF K10233 aglF; alpha-glucoside transport system permease protein D BIP78_0181 Alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein D BIP78_1501 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) K07335 bmpA; basic membrane protein A and related proteins D BIP78_0748 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D BIP78_0385 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D BIP78_1499 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) K23535 nupB; general nucleoside transport system permease protein D BIP78_0387 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) K23535 nupB; general nucleoside transport system permease protein D BIP78_0750 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein D BIP78_0749 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D BIP78_1498 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) K23536 nupC; general nucleoside transport system permease protein D BIP78_0386 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) K23536 nupC; general nucleoside transport system permease protein D BIP78_0388 ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) / ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) K23537 nupA; general nucleoside transport system ATP-binding protein D BIP78_1500 hypothetical protein K23537 nupA; general nucleoside transport system ATP-binding protein D BIP78_0751 Nucleoside ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D BIP78_1461 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D BIP78_1460 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D BIP78_1459 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D BIP78_0964 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D BIP78_0963 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D BIP78_0962 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D BIP78_0961 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BIP78_1494 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein D BIP78_1491 ABC transporter, permease protein (cluster 12, methionine/phosphonates) K02042 phnE; phosphonate transport system permease protein D BIP78_1492 hypothetical protein K02042 phnE; phosphonate transport system permease protein D BIP78_1493 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D BIP78_1218 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) K01999 livK; branched-chain amino acid transport system substrate-binding protein D BIP78_0838 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BIP78_1219 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D BIP78_0834 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D BIP78_0835 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D BIP78_1220 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D BIP78_1222 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D BIP78_0836 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D BIP78_0837 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D BIP78_1221 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D BIP78_0364 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D BIP78_0362 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D BIP78_0363 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BIP78_1508 Branched-chain amino acid transport ATP-binding protein LivG K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D BIP78_1257 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D BIP78_1069 Efflux ABC transporter, permease/ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_1068 Efflux ABC transporter, permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_0553 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_0552 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) D BIP78_0857 Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:bih03070] D BIP78_1051 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D BIP78_1650 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D BIP78_1308 hypothetical protein K03073 secE; preprotein translocase subunit SecE D BIP78_1511 hypothetical protein K03075 secG; preprotein translocase subunit SecG D BIP78_0687 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BIP78_1052 Protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BIP78_1652 Inner membrane protein translocase and chaperone YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase D BIP78_1521 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BIP78_0955 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D BIP78_0216 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bih02020] D BIP78_0964 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D BIP78_0011 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_1355 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_0087 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BIP78_0138 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D BIP78_0293 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1398 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1122 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1547 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bih02024] D BIP78_1218 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) K01999 livK; branched-chain amino acid transport system substrate-binding protein D BIP78_0838 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BIP78_1219 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D BIP78_0834 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D BIP78_0835 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D BIP78_1220 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D BIP78_1222 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D BIP78_0836 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D BIP78_0837 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D BIP78_1221 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D BIP78_0821 hypothetical protein K20276 bapA; large repetitive protein D BIP78_0970 hypothetical protein K20276 bapA; large repetitive protein D BIP78_1223 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0075 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0260 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_1398 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1122 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1547 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1585 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BIP78_0057 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BIP78_0364 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D BIP78_0362 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D BIP78_0363 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BIP78_1236 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_1374 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0372 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0959 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_1071 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0764 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0252 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0352 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_1235 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_1375 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0373 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0957 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0763 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0353 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_1072 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0251 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_1234 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_1376 protein of unknown function / ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0374 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0958 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0762 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0354 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_1073 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0250 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_1512 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D BIP78_1377 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) K02031 ddpD; peptide/nickel transport system ATP-binding protein D BIP78_1513 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D BIP78_1652 Inner membrane protein translocase and chaperone YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase D BIP78_1308 hypothetical protein K03073 secE; preprotein translocase subunit SecE D BIP78_1511 hypothetical protein K03075 secG; preprotein translocase subunit SecG D BIP78_0687 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BIP78_1052 Protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BIP78_1521 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BIP78_0955 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D BIP78_0216 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D BIP78_0939 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BIP78_0425 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BIP78_0629 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor D BIP78_0177 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BIP78_0761 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bih01501] D BIP78_0364 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D BIP78_0362 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D BIP78_0363 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BIP78_1207 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bih01502] D BIP78_0485 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BIP78_0233 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BIP78_0815 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BIP78_1505 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BIP78_1560 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bih01503] D BIP78_0207 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BIP78_0011 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_1355 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bih01000] C 01001 Protein kinases [BR:bih01001] D BIP78_1108 hypothetical protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:bih01009] D BIP78_1115 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_0276 hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:bih01002] D BIP78_0775 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D BIP78_0150 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D BIP78_1548 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D BIP78_0006 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BIP78_0004 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BIP78_0550 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BIP78_0192 Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein D BIP78_0012 Intracellular protease K05520 yhbO; deglycase [EC:3.5.1.124] D BIP78_0214 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BIP78_0854 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D BIP78_1230 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BIP78_0327 Peptidase, M20/M25/M40 family K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D BIP78_0689 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BIP78_1086 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D BIP78_1573 Aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D BIP78_1157 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D BIP78_1147 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BIP78_1243 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D BIP78_1354 D-aminopeptidase dipeptide-binding protein DppA K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D BIP78_0292 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D BIP78_0011 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_1355 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_0310 peptidase S8 and S53 subtilisin kexin sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66] D BIP78_0915 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BIP78_0778 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BIP78_1001 hypothetical protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D BIP78_0948 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D BIP78_1601 rhomboid family serine protease K07059 K07059; rhomboid family protein D BIP78_0089 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D BIP78_1469 hypothetical protein K03592 pmbA; PmbA protein D BIP78_1158 hypothetical protein K03592 pmbA; PmbA protein D BIP78_0712 TldD family protein, Actinobacterial subgroup K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:bih01003] D BIP78_0571 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D BIP78_1411 hypothetical protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D BIP78_1417 hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D BIP78_1217 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21] D BIP78_1067 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bih01005] D BIP78_0582 hypothetical protein K26858 wzy; O-antigen polymerase [EC:2.4.99.27] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bih01011] D BIP78_0864 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BIP78_1558 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BIP78_1559 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BIP78_1562 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BIP78_0494 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BIP78_0485 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BIP78_0233 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BIP78_1505 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BIP78_1560 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BIP78_0882 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BIP78_1142 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D BIP78_1207 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BIP78_1383 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D BIP78_0207 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:bih01004] D BIP78_0839 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D BIP78_0840 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BIP78_0223 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_1545 Acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BIP78_0848 Acetyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D BIP78_0498 Acetyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D BIP78_1223 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0075 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0260 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0841 Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D BIP78_0556 Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D BIP78_1049 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D BIP78_0403 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BIP78_1021 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BIP78_0612 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bih01006] D BIP78_1406 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BIP78_0709 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BIP78_0940 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:bih01007] D BIP78_0880 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BIP78_0618 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D BIP78_0647 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BIP78_1645 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BIP78_1056 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BIP78_0954 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BIP78_0809 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0122 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0123 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_1033 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BIP78_0708 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BIP78_0869 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BIP78_0081 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BIP78_0975 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BIP78_1047 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BIP78_1657 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BIP78_0755 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BIP78_1215 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BIP78_0860 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BIP78_0090 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BIP78_0772 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BIP78_1085 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BIP78_0213 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BIP78_0487 Alanine transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BIP78_0699 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D BIP78_1224 Serine palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D BIP78_1213 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bih00194] D BIP78_0627 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BIP78_0649 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BIP78_0650 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BIP78_0651 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BIP78_0652 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BIP78_0653 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BIP78_0654 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BIP78_0655 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bih03000] D BIP78_0931 hypothetical protein K13652 K13652; AraC family transcriptional regulator D BIP78_0904 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D BIP78_1292 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BIP78_1269 hypothetical protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D BIP78_1398 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1122 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_1547 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BIP78_0419 hypothetical protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D BIP78_0064 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D BIP78_0898 hypothetical protein K10947 K10947; PadR family transcriptional regulator D BIP78_0524 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BIP78_0548 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D BIP78_0752 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D BIP78_1520 hypothetical protein K03705 hrcA; heat-inducible transcriptional repressor C 03021 Transcription machinery [BR:bih03021] D BIP78_0695 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BIP78_1314 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BIP78_0663 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BIP78_0939 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BIP78_0425 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BIP78_0629 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor D BIP78_0177 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BIP78_1440 sigma-24 (FecI-like) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D BIP78_0535 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D BIP78_0436 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB D BIP78_1309 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D BIP78_1108 hypothetical protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D BIP78_0080 hypothetical protein K03624 greA; transcription elongation factor GreA D BIP78_0289 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D BIP78_0862 Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bih03019] D BIP78_1014 AAA family ATPase Cdc48 K13525 VCP; transitional endoplasmic reticulum ATPase D BIP78_0800 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D BIP78_0527 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BIP78_0533 Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D BIP78_0780 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-] D BIP78_0393 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D BIP78_0761 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BIP78_1570 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BIP78_0862 Transcription termination factor Rho K03628 rho; transcription termination factor Rho D BIP78_0547 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BIP78_1518 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BIP78_0427 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BIP78_0658 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome [BR:bih03041] C 03011 Ribosome [BR:bih03011] D BIP78_0611 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1 D BIP78_0518 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2 D BIP78_0674 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3 D BIP78_0694 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4 D BIP78_0685 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5 D BIP78_1045 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6 D BIP78_0665 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7 D BIP78_0682 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8 D BIP78_0440 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9 D BIP78_0667 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10 D BIP78_0693 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11 D BIP78_0664 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12 D BIP78_0692 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13 D BIP78_0681 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BIP78_1569 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15 D BIP78_0677 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17 D BIP78_1043 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18 D BIP78_0672 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19 D BIP78_1649 hypothetical protein K02968 RP-S20; small subunit ribosomal protein S20 D BIP78_1311 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1 D BIP78_0671 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2 D BIP78_0668 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3 D BIP78_0669 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4 D BIP78_0680 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5 D BIP78_0683 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6 D BIP78_1141 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9 D BIP78_1312 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10 D BIP78_1310 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11 D BIP78_1313 LSU ribosomal protein L7p/L12p (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12 D BIP78_1036 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13 D BIP78_0678 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14 D BIP78_0686 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15 D BIP78_0675 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16 D BIP78_0696 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17 D BIP78_0684 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18 D BIP78_0777 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19 D BIP78_0801 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20 D BIP78_0808 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21 D BIP78_0673 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22 D BIP78_0670 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23 D BIP78_0679 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24 D BIP78_0806 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27 D BIP78_1366 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BIP78_0676 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29 D BIP78_0439 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BIP78_1027 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BIP78_1307 hypothetical protein K02913 RP-L33; large subunit ribosomal protein L33 D BIP78_1599 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34 D BIP78_0802 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35 D BIP78_0691 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BIP78_1629 hypothetical protein K02897 RP-L25; large subunit ribosomal protein L25 D BIP78_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BIP78_R0043 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:bih03009] D BIP78_0527 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BIP78_0780 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-] D BIP78_1014 AAA family ATPase Cdc48 K13525 VCP; transitional endoplasmic reticulum ATPase D BIP78_0617 GTP-binding protein Era K03595 era; GTPase D BIP78_0805 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-] D BIP78_0535 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D BIP78_0436 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB D BIP78_1309 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D BIP78_0782 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BIP78_0545 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BIP78_1209 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BIP78_0196 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BIP78_0488 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BIP78_0476 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BIP78_0537 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BIP78_0826 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D BIP78_0800 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D BIP78_0219 Putative pre-16S rRNA nuclease Yqg K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D BIP78_0865 Ribosome LSU-associated GTP-binding protein HflX K03665 hflX; GTPase D BIP78_0013 Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BIP78_1596 hypothetical protein K02834 rbfA; ribosome-binding factor A D BIP78_0536 Bacterial ribosome SSU maturation protein RimP K09748 rimP; ribosome maturation factor RimP D BIP78_0635 Ribosomal silencing factor RsfA K09710 ybeB; ribosome-associated protein D BIP78_0660 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D BIP78_0360 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase D BIP78_1140 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:bih03016] D BIP78_1214 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D BIP78_1017 RNA-2',3'-PO4:RNA-5'-OH ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D BIP78_1016 hypothetical protein K24956 ZBTB8OS; protein archease D BIP78_0880 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BIP78_0860 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BIP78_1033 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BIP78_0869 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BIP78_0809 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0122 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0123 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BIP78_0618 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D BIP78_0954 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BIP78_0081 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BIP78_0975 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BIP78_0772 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BIP78_1047 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BIP78_0755 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BIP78_0090 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BIP78_1215 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BIP78_1056 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BIP78_0708 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BIP78_1657 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BIP78_1085 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BIP78_0213 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BIP78_0647 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BIP78_1645 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BIP78_1028 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BIP78_0306 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BIP78_1415 tRNA (adenine(58)-N(1))-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D BIP78_0642 tRNA (guanine(46)-N(7))-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D BIP78_0909 tRNA pseudouridine(54/55) synthase K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D BIP78_0013 Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BIP78_0940 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BIP78_1015 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D BIP78_0856 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D BIP78_0632 tRNA t(6)A37-methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D BIP78_0218 tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BIP78_0510 tRNA (pseudouridine(54)-N(1))-methyltransferase K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D BIP78_1074 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BIP78_1356 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BIP78_1339 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BIP78_1244 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D BIP78_1365 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BIP78_0376 N(6)-L-threonylcarbamoyladenine synthase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BIP78_0212 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BIP78_1570 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bih03012] D BIP78_1598 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D BIP78_0803 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3 D BIP78_0519 Translation elongation factor Ts K02357 tsf; elongation factor Ts D BIP78_1306 Translation elongation factor Tu K02358 tuf; elongation factor Tu D BIP78_1199 Translation elongation factor G K02355 fusA; elongation factor G D BIP78_1303 elongation factor G K02355 fusA; elongation factor G D BIP78_0666 Translation elongation factor G K02355 fusA; elongation factor G D BIP78_1539 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D BIP78_0657 Ribosome recycling factor K02838 frr; ribosome recycling factor D BIP78_1258 Peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BIP78_1628 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BIP78_0690 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1 D BIP78_0432 Translation elongation factor P K02356 efp; elongation factor P D BIP78_0197 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bih03110] D BIP78_1627 ClpB protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BIP78_1450 ATP-dependent Clp protease ATP-binding subunit ClpA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BIP78_1518 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BIP78_0427 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BIP78_1517 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BIP78_1519 hypothetical protein K03687 GRPE; molecular chaperone GrpE D BIP78_1452 hypothetical protein K13993 HSP20; HSP20 family protein D BIP78_0428 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES D BIP78_0011 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_1355 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107] D BIP78_1147 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BIP78_0655 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BIP78_0234 hypothetical protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D BIP78_0235 [NiFe] hydrogenase nickel incorporation-associated protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D BIP78_0310 peptidase S8 and S53 subtilisin kexin sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66] D BIP78_1294 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D BIP78_1013 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D BIP78_0739 Thioredoxin K03671 TXN; thioredoxin D BIP78_0501 Glutaredoxin K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:bih04131] D BIP78_0707 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BIP78_1014 AAA family ATPase Cdc48 K13525 VCP; transitional endoplasmic reticulum ATPase D BIP78_0935 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BIP78_0079 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system [BR:bih04121] D BIP78_0648 hypothetical protein K10297 FBXO11; F-box protein 11 C 03051 Proteasome C 03032 DNA replication proteins [BR:bih03032] D BIP78_1029 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BIP78_0395 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BIP78_1046 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D BIP78_0087 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BIP78_0517 Replicative DNA helicase (DnaB) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BIP78_0938 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BIP78_1044 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BIP78_0759 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BIP78_0773 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BIP78_1050 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BIP78_1196 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BIP78_0636 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BIP78_1600 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BIP78_0630 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BIP78_0646 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BIP78_0818 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BIP78_0426 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bih03036] D BIP78_0527 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BIP78_1046 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D BIP78_0087 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BIP78_0444 hypothetical protein K03529 smc; chromosome segregation protein D BIP78_0443 hypothetical protein K05896 scpA; segregation and condensation protein A D BIP78_0442 hypothetical protein K06024 scpB; segregation and condensation protein B D BIP78_1556 Cell division protein FtsA K03590 ftsA; cell division protein FtsA D BIP78_1257 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D BIP78_1207 Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BIP78_1557 hypothetical protein K03589 ftsQ; cell division protein FtsQ D BIP78_1561 Cell division protein FtsW K03588 ftsW; cell division protein FtsW D BIP78_0277 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BIP78_1555 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BIP78_0207 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BIP78_0887 hypothetical protein K04763 xerD; integrase/recombinase XerD D BIP78_1289 Cytosolic Fe-S cluster assembling factor NBP35 K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:bih03400] D BIP78_1507 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BIP78_1279 Deoxyribodipyrimidine photolyase, type II K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BIP78_0316 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BIP78_0702 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BIP78_0311 Mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BIP78_1607 Uracil-DNA glycosylase, family 5 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D BIP78_1534 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D BIP78_0016 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D BIP78_0484 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BIP78_1477 hypothetical protein K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D BIP78_0630 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BIP78_0268 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BIP78_1286 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BIP78_0047 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BIP78_0974 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BIP78_1005 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BIP78_1314 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BIP78_0663 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BIP78_0695 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BIP78_1261 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D BIP78_0008 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D BIP78_0884 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D BIP78_0077 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BIP78_0078 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BIP78_0759 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BIP78_0773 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BIP78_1050 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BIP78_1196 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BIP78_0636 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BIP78_1044 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BIP78_1240 RecA protein K03553 recA; recombination protein RecA D BIP78_0220 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D BIP78_1362 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BIP78_1139 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BIP78_1318 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D BIP78_1626 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D BIP78_1337 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BIP78_0626 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D BIP78_0638 Recombination protein RecR K06187 recR; recombination protein RecR D BIP78_0924 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D BIP78_0646 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BIP78_0818 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BIP78_0426 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BIP78_1046 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D BIP78_1006 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D BIP78_0952 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D BIP78_1241 hypothetical protein K03565 recX; regulatory protein D BIP78_1078 hypothetical protein K02347 polX; DNA polymerase (family X) D BIP78_0859 DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D BIP78_0560 hypothetical protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D BIP78_0069 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:bih03029] D BIP78_1598 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D BIP78_0803 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3 D BIP78_0519 Translation elongation factor Ts K02357 tsf; elongation factor Ts D BIP78_1306 Translation elongation factor Tu K02358 tuf; elongation factor Tu D BIP78_1199 Translation elongation factor G K02355 fusA; elongation factor G D BIP78_1303 elongation factor G K02355 fusA; elongation factor G D BIP78_0666 Translation elongation factor G K02355 fusA; elongation factor G D BIP78_0995 beta-lactamase-like K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-] D BIP78_0617 GTP-binding protein Era K03595 era; GTPase D BIP78_0647 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BIP78_0869 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BIP78_0975 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BIP78_0755 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BIP78_0954 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BIP78_1044 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BIP78_1565 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D BIP78_1518 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BIP78_1519 hypothetical protein K03687 GRPE; molecular chaperone GrpE D BIP78_0427 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BIP78_0428 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES D BIP78_1517 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BIP78_1289 Cytosolic Fe-S cluster assembling factor NBP35 K03593 mrp; ATP-binding protein involved in chromosome partitioning D BIP78_1652 Inner membrane protein translocase and chaperone YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bih02000] D BIP78_1069 Efflux ABC transporter, permease/ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_1068 Efflux ABC transporter, permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_0553 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_0552 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BIP78_1394 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D BIP78_0988 Efflux ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D BIP78_0408 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D BIP78_1579 hypothetical protein K02011 afuB; iron(III) transport system permease protein D BIP78_0407 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D BIP78_1580 Putrescine transport ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D BIP78_0406 Putrescine transport ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D BIP78_0791 hypothetical protein K02064 thiB; thiamine transport system substrate-binding protein D BIP78_0792 hypothetical protein K02063 thiP; thiamine transport system permease protein D BIP78_0793 hypothetical protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D BIP78_0465 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D BIP78_0464 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D BIP78_1163 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D BIP78_1162 hypothetical protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D BIP78_0084 Maltodextrin ABC transporter, ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BIP78_0455 Maltodextrin ABC transporter, substrate-binding protein MdxE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D BIP78_0454 Maltodextrin ABC transporter, permease protein MdxF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BIP78_0453 Maltodextrin ABC transporter, permease protein MdxG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BIP78_0179 Alpha-glucosides-binding periplasmic protein AglE precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein D BIP78_0180 ABC alpha-glucoside transporter, inner membrane subunit AglF K10233 aglF; alpha-glucoside transport system permease protein D BIP78_0181 Alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein D BIP78_1461 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D BIP78_1460 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D BIP78_1459 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D BIP78_1501 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) K07335 bmpA; basic membrane protein A and related proteins D BIP78_0748 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D BIP78_0385 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D BIP78_1499 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) K23535 nupB; general nucleoside transport system permease protein D BIP78_0387 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) K23535 nupB; general nucleoside transport system permease protein D BIP78_0750 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein D BIP78_0749 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D BIP78_1498 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) K23536 nupC; general nucleoside transport system permease protein D BIP78_0386 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) K23536 nupC; general nucleoside transport system permease protein D BIP78_0388 ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) / ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) K23537 nupA; general nucleoside transport system ATP-binding protein D BIP78_1500 hypothetical protein K23537 nupA; general nucleoside transport system ATP-binding protein D BIP78_0751 Nucleoside ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D BIP78_1189 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BIP78_0459 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BIP78_0458 N-Acetyl-D-glucosamine ABC transport system, permease protein 1 K02025 ABC.MS.P; multiple sugar transport system permease protein D BIP78_1190 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) K02025 ABC.MS.P; multiple sugar transport system permease protein D BIP78_0460 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) K02026 ABC.MS.P1; multiple sugar transport system permease protein D BIP78_1191 N-acetyl-D-glucosamine ABC transporter, permease protein 2 K02026 ABC.MS.P1; multiple sugar transport system permease protein D BIP78_0964 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D BIP78_0963 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D BIP78_0962 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D BIP78_0961 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BIP78_1494 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein D BIP78_1491 ABC transporter, permease protein (cluster 12, methionine/phosphonates) K02042 phnE; phosphonate transport system permease protein D BIP78_1492 hypothetical protein K02042 phnE; phosphonate transport system permease protein D BIP78_1493 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D BIP78_1218 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) K01999 livK; branched-chain amino acid transport system substrate-binding protein D BIP78_0838 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BIP78_1219 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D BIP78_0834 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D BIP78_0835 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D BIP78_1220 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D BIP78_1222 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D BIP78_0836 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D BIP78_0837 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D BIP78_1221 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D BIP78_0283 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BIP78_0280 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) K02029 ABC.PA.P; polar amino acid transport system permease protein D BIP78_0282 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) K02029 ABC.PA.P; polar amino acid transport system permease protein D BIP78_0364 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D BIP78_0362 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D BIP78_0363 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D BIP78_1236 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_1374 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0372 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0959 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_1071 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0764 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0252 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_0352 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BIP78_1235 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_1375 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0373 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0957 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0763 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0353 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_1072 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_0251 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BIP78_1234 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_1376 protein of unknown function / ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0374 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0958 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0762 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0354 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_1073 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_0250 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BIP78_1512 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D BIP78_1377 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) K02031 ddpD; peptide/nickel transport system ATP-binding protein D BIP78_1513 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D BIP78_0603 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D BIP78_0604 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D BIP78_0602 Vitamin B12 ABC transporter, permease protein BtuC K02015 ABC.FEV.P; iron complex transport system permease protein D BIP78_0601 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D BIP78_0034 hypothetical protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D BIP78_1508 Branched-chain amino acid transport ATP-binding protein LivG K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D BIP78_1257 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D BIP78_0127 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein D BIP78_0126 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein D BIP78_0125 Efflux ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein D BIP78_1639 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_1640 Oligopeptide transport system permease protein OppC K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_1004 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_1442 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_1443 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_0096 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_0097 Efflux ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_0297 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_0020 Efflux ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_0021 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_0451 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BIP78_1641 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_1003 Efflux ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_1444 Efflux ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_0450 Efflux ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_0095 Efflux ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_0296 Efflux ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_0022 Efflux ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BIP78_1255 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BIP78_1263 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BIP78_1432 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BIP78_1433 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BIP78_0796 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BIP78_1254 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BIP78_1264 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BIP78_1431 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BIP78_0400 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BIP78_0795 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BIP78_0466 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D BIP78_0526 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D BIP78_1576 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D BIP78_1592 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D BIP78_0993 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D BIP78_0849 putative MFS-type transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D BIP78_1544 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D BIP78_0911 hypothetical protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D BIP78_0812 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D BIP78_0133 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D BIP78_0134 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D BIP78_1054 Mg/Co/Ni transporter MgtE, CBS domain-containing K06213 mgtE; magnesium transporter D BIP78_0109 Mg/Co/Ni transporter MgtE, CBS domain-containing K06213 mgtE; magnesium transporter D BIP78_0215 Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D BIP78_1565 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D BIP78_1282 hypothetical protein K21449 ata; trimeric autotransporter adhesin D BIP78_1386 Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein D BIP78_1416 Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family D BIP78_0057 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BIP78_0825 hypothetical protein K07301 yrbG; cation:H+ antiporter D BIP78_0512 Trk potassium uptake system protein TrkH K03498 trkH; trk/ktr system potassium uptake protein D BIP78_0511 hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein D BIP78_1577 hypothetical protein K03893 arsB; arsenical pump membrane protein D BIP78_0735 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter D BIP78_0346 hypothetical protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D BIP78_0347 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D BIP78_0243 Na(+) H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D BIP78_0348 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D BIP78_0349 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D BIP78_0236 Na(+) H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D BIP78_0237 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D BIP78_0343 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D BIP78_0238 Membrane bound hydrogenase, MbhC subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D BIP78_0344 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D BIP78_1142 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D BIP78_0717 hypothetical protein K13936 mdcF; malonate transporter and related proteins D BIP78_0874 hypothetical protein K24180 mleP; malate permease and related proteins D BIP78_1561 Cell division protein FtsW K03588 ftsW; cell division protein FtsW D BIP78_1363 hypothetical protein K03641 tolB; TolB protein D BIP78_1449 hypothetical protein K03641 tolB; TolB protein D BIP78_0448 K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D BIP78_0521 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D BIP78_0523 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D BIP78_0738 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein D BIP78_0208 hypothetical protein K04758 feoA; ferrous iron transport protein A D BIP78_0209 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D BIP78_0700 Mg(2+)-transport-ATPase-associated protein MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:bih02044] D BIP78_1293 hypothetical protein K02237 comEA; competence protein ComEA D BIP78_1606 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D BIP78_1521 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BIP78_1051 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D BIP78_1308 hypothetical protein K03073 secE; preprotein translocase subunit SecE D BIP78_1650 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D BIP78_1511 hypothetical protein K03075 secG; preprotein translocase subunit SecG D BIP78_0687 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BIP78_0216 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BIP78_0955 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D BIP78_1052 Protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BIP78_1652 Inner membrane protein translocase and chaperone YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:bih02042] D BIP78_0215 Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D BIP78_1447 hemolysin-3 K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:bih02022] C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bih04812] D BIP78_0608 AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D BIP78_0277 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BIP78_1555 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BIP78_1556 Cell division protein FtsA K03590 ftsA; cell division protein FtsA C 04147 Exosome [BR:bih04147] D BIP78_0761 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BIP78_0935 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BIP78_0079 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BIP78_1273 Peroxiredoxin, Bcp-type K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D BIP78_0427 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BIP78_1518 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D BIP78_1178 ATP citrate synthase, beta chain K01648 ACLY; ATP citrate (pro-S)-lyase [EC:2.3.3.8] D BIP78_1306 Translation elongation factor Tu K02358 tuf; elongation factor Tu D BIP78_1014 AAA family ATPase Cdc48 K13525 VCP; transitional endoplasmic reticulum ATPase D BIP78_0306 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BIP78_1223 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0075 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0260 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BIP78_0843 Acetyl CoA synthase (Acetyl-CoA c-acetyltransferase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BIP78_1115 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D BIP78_0688 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BIP78_1188 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BIP78_0477 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D BIP78_1012 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BIP78_1455 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D BIP78_0293 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BIP78_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BIP78_1474 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BIP78_0418 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_0421 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D BIP78_1204 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BIP78_1082 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:bih02048] D BIP78_0924 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D BIP78_0925 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D BIP78_0919 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D BIP78_0910 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D BIP78_0923 CRISPR-associated RecB family exonuclease Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D BIP78_0921 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1 D BIP78_0922 CRISPR-associated protein, Csd2/Csh2 family K19118 csd2; CRISPR-associated protein Csd2 D BIP78_0920 CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D BIP78_0161 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D BIP78_0160 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D BIP78_1058 Mrr restriction system protein K07448 mrr; restriction system protein D BIP78_0574 Programmed cell death toxin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D BIP78_0277 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BIP78_1555 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BIP78_0880 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:bih01504] D BIP78_1658 hypothetical protein K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bih03100] D BIP78_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BIP78_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BIP78_R0012 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BIP78_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BIP78_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BIP78_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BIP78_R0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BIP78_R0045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BIP78_R0020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BIP78_R0031 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BIP78_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BIP78_R0002 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BIP78_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BIP78_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BIP78_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BIP78_R0007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BIP78_R0036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BIP78_R0043 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BIP78_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BIP78_1399 Hopanoid-associated sugar epimerase HpnA K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D BIP78_0380 Xanthine dehydrogenase iron-sulfur subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D BIP78_0390 Xanthine dehydrogenase iron-sulfur subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D BIP78_0389 hypothetical protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D BIP78_0189 Alkyl hydroperoxide reductase subunit C-like protein K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25] D BIP78_0540 Thiol peroxidase, Bcp-type K24130 K24130; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25] D BIP78_1100 NAD-reducing [NiFe] hydrogenase HoxFUYH(E), subunit beta (HoxH) K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D BIP78_1101 NAD-reducing [NiFe] hydrogenase HoxFUYH(E), subunit delta (HoxY) K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D BIP78_1103 NADP-reducing hydrogenase, subunit B K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D BIP78_1098 HoxF-like protein K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D BIP78_1096 NADH-ubiquinone oxidoreductase chain F K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D BIP78_0247 Membrane bound hydrogenase, NiFe-hydrogenase large subunit MbhL K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2] D BIP78_0246 hypothetical protein K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2] D BIP78_0245 Membrane bound hydrogenase, NiFe-hydrogenase small subunit MbJ K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D BIP78_1275 Superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2] D BIP78_1274 Ferritin-like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2] D BIP78_0733 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D BIP78_1646 Ribonucleotide reductase of class III (anaerobic), activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D BIP78_0211 Radical SAM, Pyruvate-formate lyase-activating enzyme like K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D BIP78_1166 radical activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D BIP78_0248 hypothetical protein K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-] D BIP78_0508 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D BIP78_1297 hypothetical protein K15520 mshD; mycothiol synthase [EC:2.3.1.189] D BIP78_0770 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D BIP78_1089 Deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D BIP78_1087 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D BIP78_0771 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BIP78_1625 hypothetical protein K07067 disA; diadenylate cyclase [EC:2.7.7.85] D BIP78_0481 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D BIP78_0437 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D BIP78_0528 Hydrolase, HAD subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-] D BIP78_1291 DUF89 protein CxxC subfamily K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D BIP78_0942 putative metal-dependent hydrolase YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BIP78_0071 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D BIP78_1336 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BIP78_1603 Guanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D BIP78_0697 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D BIP78_0978 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BIP78_0891 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BIP78_1277 UV-endonuclease-like protein K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D BIP78_0941 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D BIP78_0788 hypothetical protein K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D BIP78_0326 hypothetical protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D BIP78_1304 hypothetical protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D BIP78_0745 Putative oxidoreductase subunit K02381 fdrA; FdrA protein D BIP78_1112 hypothetical protein K05337 fer; ferredoxin D BIP78_0469 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins D BIP78_0239 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D D BIP78_0242 Membrane bound hydrogenase, MbhG subunit K14114 ehbE; energy-converting hydrogenase B subunit E D BIP78_0241 hypothetical protein K14118 ehbI; energy-converting hydrogenase B subunit I D BIP78_0114 hypothetical protein K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D BIP78_0210 UPF0001 protein YggS K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D BIP78_1251 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D BIP78_0317 Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D BIP78_1541 bifunctional acyl-CoA synthetase/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D BIP78_0628 Cold shock protein of CSP family K03704 cspA; cold shock protein C 99974 Translation D BIP78_1095 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D BIP78_0916 hypothetical protein K03545 tig; trigger factor D BIP78_1538 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein D BIP78_0719 [NiFe] hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D BIP78_0720 [NiFe] hydrogenase metallocenter assembly protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D BIP78_0721 [NiFe] hydrogenase metallocenter assembly protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D BIP78_0232 [NiFe] hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF D BIP78_1566 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein K07391 comM; magnesium chelatase family protein D BIP78_0499 OsmC/Ohr family protein K07397 yhfA; putative redox protein D BIP78_0902 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor D BIP78_1000 hypothetical protein K07403 nfeD; membrane-bound serine protease (ClpP class) D BIP78_0341 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D BIP78_0319 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D BIP78_0172 Adenine-specific DNA methylase containing a Zn-ribbon K07445 K07445; putative DNA methylase D BIP78_1063 Adenine-specific DNA methylase containing a Zn-ribbon K07445 K07445; putative DNA methylase D BIP78_0943 UPF0758 family protein K03630 radC; DNA repair protein RadC D BIP78_1061 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D BIP78_0269 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D BIP78_1567 hypothetical protein K07460 yraN; putative endonuclease D BIP78_0990 hypothetical protein K07465 K07465; putative RecB family exonuclease D BIP78_1609 Rossmann fold nucleotide-binding protein Smf K04096 smf; DNA processing protein D BIP78_0086 Replication-associated recombination protein RarA K07478 ycaJ; putative ATPase D BIP78_0017 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D BIP78_0566 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D BIP78_0098 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D BIP78_1478 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D BIP78_1397 Mobile element protein K07493 K07493; putative transposase C 99979 Viral proteins C 99998 Others D BIP78_0637 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D BIP78_0723 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family C 99978 Cell growth D BIP78_1651 hypothetical protein K06346 jag; spoIIIJ-associated protein D BIP78_0532 hypothetical protein K06416 spoVS; stage V sporulation protein S D BIP78_0953 hypothetical protein K06416 spoVS; stage V sporulation protein S C 99993 Cell motility C 99995 Signaling proteins D BIP78_0631 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins C 99994 Others D BIP78_0960 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D BIP78_1485 hypothetical protein K07001 K07001; NTE family protein D BIP78_1113 hypothetical protein K07001 K07001; NTE family protein D BIP78_0563 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D BIP78_0467 Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D BIP78_0287 LemA protein K03744 lemA; LemA protein C 99997 Function unknown D BIP78_0124 hypothetical protein K06871 K06871; uncharacterized protein D BIP78_0264 hypothetical protein K06889 K06889; uncharacterized protein D BIP78_1490 hypothetical protein K06921 K06921; uncharacterized protein D BIP78_1288 hypothetical protein K06933 K06933; uncharacterized protein D BIP78_0703 hypothetical protein K06934 K06934; uncharacterized protein D BIP78_1495 hypothetical protein K06971 K06971; uncharacterized protein D BIP78_1496 hypothetical protein K06971 K06971; uncharacterized protein D BIP78_1587 Putative membrane protease YugP K06973 K06973; uncharacterized protein D BIP78_0981 hypothetical protein K06976 K06976; uncharacterized protein D BIP78_0200 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein D BIP78_1350 hypothetical protein K07003 K07003; uncharacterized protein D BIP78_0534 hypothetical protein K07003 K07003; uncharacterized protein D BIP78_1448 hypothetical protein K07005 K07005; uncharacterized protein D BIP78_1192 hypothetical protein K07045 K07045; uncharacterized protein D BIP78_1662 hypothetical protein K07063 K07063; uncharacterized protein D BIP78_0059 hypothetical protein K07064 K07064; uncharacterized protein D BIP78_1663 nucleotidyltransferase K07075 K07075; uncharacterized protein D BIP78_1387 Aldo/keto reductase, 4Fe-4S-containing, TM1183 family K07079 K07079; uncharacterized protein D BIP78_0741 putative membrane protein, YraQ family K07089 K07089; uncharacterized protein D BIP78_1484 hypothetical protein K07090 K07090; uncharacterized protein D BIP78_0066 hypothetical protein K07090 K07090; uncharacterized protein D BIP78_0542 hypothetical protein K07095 K07095; uncharacterized protein D BIP78_0271 hypothetical protein K07096 K07096; uncharacterized protein D BIP78_0050 hypothetical protein K07112 K07112; uncharacterized protein D BIP78_0051 Lipocalin-related protein and Bos/Can/Equ allergen K07112 K07112; uncharacterized protein D BIP78_0158 ATPase K07133 K07133; uncharacterized protein D BIP78_0546 hypothetical protein K07137 K07137; uncharacterized protein D BIP78_0813 Uncharacterized DUF554 membrane protein K07150 K07150; uncharacterized protein D BIP78_1589 hypothetical protein K07164 K07164; uncharacterized protein D BIP78_0950 Membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D BIP78_1537 hypothetical protein K08999 K08999; uncharacterized protein D BIP78_1591 DUF763 domain-containing protein K09003 K09003; uncharacterized protein D BIP78_1612 hypothetical protein K09009 K09009; uncharacterized protein D BIP78_0489 hypothetical protein K09122 K09122; uncharacterized protein D BIP78_0564 hypothetical protein K09129 K09129; uncharacterized protein D BIP78_1348 hypothetical protein K09133 K09133; uncharacterized protein D BIP78_0633 putative ACR K09141 K09141; uncharacterized protein D BIP78_0727 Hemerythrin domain protein K09155 K09155; uncharacterized protein D BIP78_0886 hypothetical protein K09163 K09163; uncharacterized protein D BIP78_1597 hypothetical protein K09764 K09764; uncharacterized protein D BIP78_0495 hypothetical protein K09776 K09776; uncharacterized protein D BIP78_0324 hypothetical protein K09790 K09790; uncharacterized protein D BIP78_0339 hypothetical protein K09927 K09927; uncharacterized protein D BIP78_1301 hypothetical protein K07220 K07220; uncharacterized protein D BIP78_1302 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024