+D GENES KO
#
KEGG Orthology (KO) - Bifidobacterium indicum
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bii00010]
D BINDI_0236 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BINDI_1336 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BINDI_0637 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BINDI_0424 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BINDI_0638 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BINDI_0650 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_1031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_0762 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BINDI_0730 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0386 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D BINDI_0421 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_0848 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
C 00020 Citrate cycle (TCA cycle) [PATH:bii00020]
D BINDI_0981 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D BINDI_0460 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D BINDI_0554 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0615 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BINDI_0616 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BINDI_0783 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BINDI_0784 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
C 00030 Pentose phosphate pathway [PATH:bii00030]
D BINDI_0236 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BINDI_0124 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BINDI_0122 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D BINDI_0110 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BINDI_0116 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BINDI_0571 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BINDI_0634 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BINDI_0635 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D BINDI_1050 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BINDI_0720 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D BINDI_0777 PfkB family ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_0531 ribose-phosphate pyrophosphokinase PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BINDI_1115 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D BINDI_0117 thermoresistant glucokinase family carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D BINDI_1116 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D BINDI_1254 kinase, PfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D BINDI_1336 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions [PATH:bii00040]
D BINDI_1111 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D BINDI_1114 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D BINDI_1113 mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D BINDI_0586 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BINDI_1255 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D BINDI_0312 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D BINDI_0571 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BINDI_0242 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D BINDI_0409 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D BINDI_0408 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:bii00051]
D BINDI_0406 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BINDI_1022 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BINDI_0235 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BINDI_0408 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D BINDI_1336 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BINDI_0637 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:bii00052]
D BINDI_0421 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BINDI_0279 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BINDI_0278 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D BINDI_1014 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BINDI_0586 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_0968 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D BINDI_0333 beta-galactosidase I K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D BINDI_1248 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D BINDI_0028 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BINDI_0029 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BINDI_0361 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D BINDI_0090 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BINDI_0070 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:bii00053]
D BINDI_1255 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D BINDI_0312 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:bii00500]
D BINDI_0361 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D BINDI_0090 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BINDI_0586 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BINDI_0845 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1380 beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1381 beta-glucosidase A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0334 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0100 Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D BINDI_0070 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D BINDI_0071 trehalose 6-phosphate synthase/phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D BINDI_0106 glycosyl hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_0236 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BINDI_0406 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bii00520]
D BINDI_0406 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BINDI_0970 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BINDI_0305 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D BINDI_0533 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D BINDI_0193 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BINDI_1117 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BINDI_0848 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_0586 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BINDI_0279 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BINDI_0278 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D BINDI_1014 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BINDI_1248 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D BINDI_0236 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BINDI_1022 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BINDI_0235 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:bii00620]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0516 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_0722 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BINDI_0721 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BINDI_0730 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BINDI_0386 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BINDI_1313 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D BINDI_0030 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D BINDI_1251 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bii00630]
D BINDI_0981 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D BINDI_0460 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D BINDI_0581 hydrolase or phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D BINDI_0838 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0381 putative glutamine synthetase type I, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0527 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0267 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D BINDI_1115 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:bii00640]
D BINDI_0722 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BINDI_0721 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0516 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BINDI_0616 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BINDI_0615 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BINDI_0386 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BINDI_0537 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:bii00650]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D BINDI_0783 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BINDI_0784 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BINDI_0612 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D BINDI_0516 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BINDI_0220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BINDI_0219 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BINDI_0997 acetoin dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:bii00660]
D BINDI_0220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BINDI_0219 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BINDI_0616 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BINDI_0615 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BINDI_0188 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D BINDI_0189 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D BINDI_0270 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bii00562]
D BINDI_0880 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BINDI_1249 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D BINDI_0637 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bii00190]
D BINDI_0180 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D BINDI_0783 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BINDI_0784 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BINDI_0181 CydA, cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D BINDI_0182 CydB, cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D BINDI_1203 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BINDI_1201 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BINDI_1202 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BINDI_1204 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BINDI_1200 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BINDI_1207 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BINDI_1205 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BINDI_1206 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BINDI_1210 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D BINDI_1270 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bii00680]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_0527 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BINDI_0762 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BINDI_0030 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D BINDI_1336 fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BINDI_0722 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BINDI_0721 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BINDI_0650 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_1031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:bii00910]
D BINDI_0951 nitrite reductase (NO-forming) K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D BINDI_1076 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BINDI_0838 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0381 putative glutamine synthetase type I, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0677 glutamine amidotransferase class-II K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D BINDI_0676 glutamate synthase small chain GltD K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BINDI_0021 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
D BINDI_1208 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bii00061]
D BINDI_0684 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0557 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bii00071]
D BINDI_0684 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0557 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bii00561]
D BINDI_0537 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D BINDI_0815 haloacid dehalogenase (HAD) superfamily hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D BINDI_0483 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BINDI_1047 diacylglycerol kinase, catalytic region protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BINDI_1009 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D BINDI_0028 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BINDI_0029 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:bii00564]
D BINDI_0195 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BINDI_0483 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BINDI_1047 diacylglycerol kinase, catalytic region protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BINDI_0054 alpha/beta hydrolase fold protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D BINDI_0564 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BINDI_0472 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D BINDI_0625 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D BINDI_0574 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:bii00600]
D BINDI_0332 glycosyl hydrolase, 30 family K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BINDI_1135 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BINDI_1136 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BINDI_0028 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BINDI_0029 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:bii01040]
D BINDI_0818 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D BINDI_1002 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bii00230]
D BINDI_0729 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BINDI_0725 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_0531 ribose-phosphate pyrophosphokinase PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BINDI_0940 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BINDI_0942 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D BINDI_0937 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D BINDI_0939 Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D BINDI_0941 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D BINDI_0948 phosphoribosylaminoimidazole carboxylase NCAIR, mutase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D BINDI_0949 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D BINDI_0938 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D BINDI_0875 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BINDI_0613 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BINDI_0617 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BINDI_0532 HAD-superfamily hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D BINDI_1154 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BINDI_1006 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D BINDI_0991 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BINDI_0555 GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BINDI_0231 nucleoside-triphosphatase, Ham1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D BINDI_0718 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D BINDI_0719 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BINDI_0889 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D BINDI_1121 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BINDI_1120 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BINDI_1123 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BINDI_0177 Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D BINDI_0956 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D BINDI_0494 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BINDI_0759 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D BINDI_0465 RelA/SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D BINDI_1183 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D BINDI_1335 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BINDI_1079 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:bii00240]
D BINDI_0891 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BINDI_0892 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BINDI_0659 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BINDI_0658 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D BINDI_0657 putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D BINDI_0654 b-type dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D BINDI_0655 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D BINDI_0653 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D BINDI_1231 hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D BINDI_0656 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D BINDI_0562 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BINDI_1175 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D BINDI_0700 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BINDI_0532 HAD-superfamily hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D BINDI_1273 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D BINDI_0177 Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D BINDI_1340 dcd Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D BINDI_1121 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BINDI_1120 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BINDI_1123 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BINDI_1245 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BINDI_0493 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BINDI_1017 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bii00250]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D BINDI_0430 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BINDI_0820 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BINDI_0819 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BINDI_1335 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BINDI_0875 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BINDI_0659 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BINDI_0658 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D BINDI_0612 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D BINDI_0677 glutamine amidotransferase class-II K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D BINDI_0676 glutamate synthase small chain GltD K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BINDI_1076 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BINDI_0838 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0381 putative glutamine synthetase type I, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0891 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BINDI_0892 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BINDI_0970 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BINDI_0940 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bii00260]
D BINDI_1260 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BINDI_1258 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BINDI_1177 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D BINDI_1176 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D BINDI_0526 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D BINDI_0931 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D BINDI_0527 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BINDI_0650 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_1031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0267 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D BINDI_1045 L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D BINDI_1046 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D BINDI_0072 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BINDI_0569 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D BINDI_0568 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bii00270]
D BINDI_0998 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BINDI_0669 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D BINDI_0886 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BINDI_1057 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BINDI_1146 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BINDI_1154 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BINDI_0915 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_1300 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_1054 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BINDI_0960 S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D BINDI_1260 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BINDI_1258 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BINDI_1177 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D BINDI_1208 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BINDI_0778 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D BINDI_1118 cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D BINDI_0682 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BINDI_0335 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0386 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BINDI_1045 L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D BINDI_1046 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:bii00280]
D BINDI_0682 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bii00290]
D BINDI_0072 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BINDI_0188 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D BINDI_0189 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D BINDI_0270 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D BINDI_0220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BINDI_0219 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BINDI_1333 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BINDI_0888 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BINDI_0682 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BINDI_1251 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bii00300]
D BINDI_1177 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D BINDI_1260 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BINDI_1258 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BINDI_0298 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BINDI_0297 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D BINDI_0980 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D BINDI_0823 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D BINDI_1173 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BINDI_0344 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BINDI_1179 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BINDI_1355 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D BINDI_0417 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BINDI_0397 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bii00310]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0612 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:bii00220]
D BINDI_0822 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D BINDI_0820 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BINDI_0819 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BINDI_0838 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0381 putative glutamine synthetase type I, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0891 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BINDI_0892 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BINDI_1076 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0825 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D BINDI_0824 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D BINDI_0826 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D BINDI_0823 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:bii00330]
D BINDI_0774 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D BINDI_1168 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D BINDI_0528 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bii00340]
D BINDI_0573 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D BINDI_0572 HisE Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D BINDI_0567 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D BINDI_0380 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D BINDI_0379 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D BINDI_0566 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D BINDI_0377 histidine biosynthesis bifunctional protein HisB (histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase) K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D BINDI_0376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_1124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_0723 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D BINDI_0375 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:bii00350]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_1124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D BINDI_0612 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:bii00360]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_1124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bii00400]
D BINDI_1147 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BINDI_1148 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BINDI_0703 shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D BINDI_0702 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D BINDI_0724 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D BINDI_0705 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D BINDI_1310 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BINDI_1309 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D BINDI_0481 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D BINDI_0380 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D BINDI_0569 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D BINDI_0568 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D BINDI_1219 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D BINDI_0445 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D BINDI_0446 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_1124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:bii00430]
D BINDI_0721 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BINDI_0722 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bii00450]
D BINDI_0998 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BINDI_0669 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D BINDI_0695 NifS-like aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BINDI_0023 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BINDI_1358 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BINDI_0105 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bii00460]
D BINDI_0845 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1380 beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1381 beta-glucosidase A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0334 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0100 Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D BINDI_0527 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bii00470]
D BINDI_0958 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BINDI_0197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_1356 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_0343 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BINDI_0399 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BINDI_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D BINDI_0344 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BINDI_1179 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bii00480]
D BINDI_0335 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D BINDI_0304 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D BINDI_0554 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D BINDI_0110 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BINDI_0116 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BINDI_0124 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:bii00515]
D BINDI_0101 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:bii00514]
D BINDI_0101 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D BINDI_0332 glycosyl hydrolase, 30 family K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BINDI_1135 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BINDI_1136 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:bii00542]
D BINDI_0992 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bii00541]
D BINDI_0586 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BINDI_1014 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BINDI_1248 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D BINDI_0159 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BINDI_0157 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BINDI_0158 dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D BINDI_1022 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BINDI_0235 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BINDI_0533 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:bii00550]
D BINDI_0193 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BINDI_1117 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BINDI_0402 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BINDI_0399 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BINDI_0417 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BINDI_0197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_1356 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_0397 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BINDI_0360 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BINDI_0630 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BINDI_0398 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BINDI_0401 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BINDI_0395 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BINDI_0042 penicillin binding protein transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D BINDI_1008 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BINDI_1276 putative UDP-N-acetylmuramyl tripeptide synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D BINDI_1275 cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:bii00552]
D BINDI_0630 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BINDI_0992 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bii00543]
D BINDI_0992 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bii00730]
D BINDI_0950 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BINDI_0426 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D BINDI_1079 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bii00740]
D BINDI_1061 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D BINDI_0077 nitro/flavin reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D BINDI_0729 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BINDI_0725 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:bii00750]
D BINDI_0779 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D BINDI_0526 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bii00760]
D BINDI_0228 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D BINDI_0532 HAD-superfamily hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D BINDI_0530 nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BINDI_0265 Phosphohydrolase (MutT/nudix family protein) K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D BINDI_0514 glutamine-dependent NAD( ) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D BINDI_0473 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D BINDI_0073 NAD-dependent protein deacetylases, Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D BINDI_0523 ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D BINDI_0612 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bii00770]
D BINDI_0220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BINDI_0219 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BINDI_1333 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BINDI_0888 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BINDI_0069 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D BINDI_0967 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D BINDI_0225 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BINDI_0734 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BINDI_0682 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:bii00785]
D BINDI_0272 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0267 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bii00790]
D BINDI_1004 dihydroneopterin aldolase fused to 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D BINDI_1016 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BINDI_0413 Folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:bii00670]
D BINDI_1016 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BINDI_1242 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D BINDI_0736 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BINDI_0527 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BINDI_0613 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BINDI_0883 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BINDI_1017 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D BINDI_0668 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D BINDI_1128 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D BINDI_0179 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bii00130]
D BINDI_1032 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D BINDI_0768 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bii00900]
D BINDI_0950 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BINDI_0356 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D BINDI_1153 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D BINDI_1349 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D BINDI_0739 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D BINDI_0357 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D BINDI_0422 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D BINDI_0485 probably bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D BINDI_0360 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D BINDI_0634 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bii00523]
D BINDI_0159 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BINDI_0157 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BINDI_0158 dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:bii01054]
D BINDI_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D BINDI_0157 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:bii00946]
D BINDI_0845 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1380 beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1381 beta-glucosidase A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0334 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0100 Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D BINDI_1140 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:bii00332]
D BINDI_1168 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D BINDI_0528 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bii00261]
D BINDI_1260 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BINDI_1258 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BINDI_0298 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BINDI_0297 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bii00521]
D BINDI_1048 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BINDI_1249 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D BINDI_0880 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BINDI_0159 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BINDI_0157 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BINDI_0158 dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:bii00525]
D BINDI_0159 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BINDI_0157 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bii00401]
D BINDI_0446 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_1124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D BINDI_1310 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BINDI_1309 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bii00999]
D BINDI_0886 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BINDI_0845 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1380 beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_1381 beta-glucosidase A K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0334 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BINDI_0100 Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D BINDI_1344 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bii00625]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D BINDI_0884 HAD-superfamily hydrolase, subfamily IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D BINDI_0884 HAD-superfamily hydrolase, subfamily IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:bii00626]
D BINDI_0308 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BINDI_1102 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bii03020]
D BINDI_0285 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BINDI_0286 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BINDI_1070 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BINDI_0887 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bii03010]
D BINDI_0735 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BINDI_0560 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BINDI_1094 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BINDI_0713 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BINDI_1083 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BINDI_0165 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BINDI_0897 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BINDI_1086 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BINDI_1103 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BINDI_1101 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BINDI_1071 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BINDI_0898 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BINDI_1072 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BINDI_1087 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BINDI_1157 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BINDI_0211 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BINDI_1091 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BINDI_0167 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BINDI_1096 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BINDI_0680 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BINDI_1162 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BINDI_1097 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BINDI_1100 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BINDI_1099 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BINDI_1088 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BINDI_1085 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BINDI_1137 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BINDI_0168 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BINDI_1138 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BINDI_1163 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BINDI_1104 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BINDI_1090 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BINDI_1081 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BINDI_1093 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BINDI_1069 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BINDI_1084 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BINDI_0237 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BINDI_0433 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BINDI_1171 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BINDI_1095 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BINDI_1098 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BINDI_1089 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BINDI_0683 50S ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D BINDI_1170 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BINDI_0202 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BINDI_1092 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BINDI_1082 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BINDI_0996 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BINDI_0222 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BINDI_1119 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BINDI_1365 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BINDI_0432 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BINDI_1073 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BINDI_1rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_2rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_3rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_1rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_2rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_3rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_3rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_1rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_2rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bii00970]
D BINDI_tRNA1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BINDI_tRNA5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BINDI_tRNA15 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BINDI_tRNA29 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA12 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA11 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA43 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA16 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BINDI_tRNA32 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BINDI_tRNA19 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BINDI_tRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BINDI_tRNA8 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BINDI_tRNA31 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BINDI_tRNA7 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BINDI_tRNA4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA41 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA18 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA27 tRNA-His K14226 tRNA-His; tRNA His
D BINDI_tRNA2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BINDI_tRNA3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA9 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA45 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BINDI_tRNA46 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BINDI_tRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D BINDI_tRNA30 tRNA-Met K14230 tRNA-Met; tRNA Met
D BINDI_tRNA44 tRNA-Met K14230 tRNA-Met; tRNA Met
D BINDI_tRNA33 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BINDI_tRNA17 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BINDI_tRNA34 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BINDI_tRNA23 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BINDI_tRNA35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA6 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA47 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BINDI_tRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BINDI_tRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BINDI_tRNA42 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BINDI_tRNA40 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BINDI_tRNA21 tRNA-Val K14237 tRNA-Val; tRNA Val
D BINDI_tRNA13 tRNA-Val K14237 tRNA-Val; tRNA Val
D BINDI_tRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val
D BINDI_0179 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BINDI_1226 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BINDI_1225 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BINDI_1227 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BINDI_0709 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BINDI_0497 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BINDI_0365 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BINDI_0626 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BINDI_1044 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BINDI_0216 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BINDI_0105 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BINDI_0883 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BINDI_1218 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BINDI_0542 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BINDI_0340 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BINDI_1033 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BINDI_1180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BINDI_0987 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BINDI_0496 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BINDI_0829 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BINDI_0828 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BINDI_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BINDI_0032 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bii03060]
D BINDI_1080 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BINDI_1165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BINDI_0636 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BINDI_0618 putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D BINDI_1363 membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BINDI_0480 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BINDI_0213 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BINDI_1281 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor
D BINDI_0238 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BINDI_0371 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D BINDI_1316 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
C 03050 Proteasome
D BINDI_0882 AAA family ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:bii03018]
D BINDI_1172 ribonuclease E/G family protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D BINDI_0762 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BINDI_1156 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BINDI_0961 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BINDI_1220 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BINDI_0299 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D BINDI_0091 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D BINDI_0862 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BINDI_1270 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D BINDI_1351 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bii03030]
D BINDI_0418 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BINDI_0373 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BINDI_1262 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BINDI_1244 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BINDI_0545 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BINDI_1367 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BINDI_1277 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BINDI_0955 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BINDI_0985 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0166 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0917 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_1049 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BINDI_0239 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BINDI_0841 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bii03410]
D BINDI_1216 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BINDI_0865 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BINDI_0283 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BINDI_0645 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D BINDI_0986 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BINDI_0841 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bii03420]
D BINDI_0763 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BINDI_0644 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D BINDI_0701 excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D BINDI_0733 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D BINDI_0643 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D BINDI_0716 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0350 DNA helicase II containing UvrD/REP helicase domain K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0294 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0841 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bii03430]
D BINDI_0716 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0350 DNA helicase II containing UvrD/REP helicase domain K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0294 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0327 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BINDI_0326 Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BINDI_0985 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0166 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0917 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0373 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BINDI_1367 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BINDI_1262 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BINDI_0545 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BINDI_1244 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BINDI_0418 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BINDI_0841 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bii03440]
D BINDI_0985 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0166 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0917 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_1369 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BINDI_0359 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D BINDI_1261 recombination protein RecR K06187 recR; recombination protein RecR
D BINDI_0476 RecA protein K03553 recA; recombination protein RecA
D BINDI_0620 crossover junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BINDI_0619 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BINDI_0621 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BINDI_0203 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BINDI_0373 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BINDI_1367 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BINDI_1262 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BINDI_0545 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BINDI_1244 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BINDI_0418 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BINDI_0885 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:bii03250]
D BINDI_0510 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bii02010]
D BINDI_1343 ATP binding protein of ABC transporter for sugars K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BINDI_0025 putative ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0112 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0811 ABC superfamily ATP binding cassette transporter, binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_1028 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0302 extracellular solute-binding protein, family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0026 putative ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0113 binding-protein-dependent transporter inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0810 sugar ABC superfamily ATP binding cassette transporter, membrane protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_1027 ABC transporter integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0301 ABC transporter membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0027 putative ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0114 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0808 putative sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_1026 ABC transporter integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0300 ABC transporter K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0664 sugar ABC superfamily ATP binding cassette transporter, binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D BINDI_0662 ABC-type xylose transport system, permease component K10547 gguB; putative multiple sugar transport system permease protein
D BINDI_0663 xylose ABC transporter ATPase K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BINDI_0251 phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D BINDI_0252 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D BINDI_0253 ABC-type phosphate transporter, permease component K02038 pstA; phosphate transport system permease protein
D BINDI_0254 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BINDI_0504 glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein
D BINDI_0503 putative amino acid ABC transporter K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D BINDI_0541 family 3 extracellular solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D BINDI_0499 family 3 extracellular solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D BINDI_0500 permease protein of ABC transporter for glutamate K10006 gluC; glutamate transport system permease protein
D BINDI_0501 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein
D BINDI_0498 glutamate transport ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D BINDI_0933 D-methionine ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein
D BINDI_0934 D-methionine ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein
D BINDI_0935 D-methionine ABC transporter K02072 metI; D-methionine transport system permease protein
D BINDI_0936 D-methionine ABC transporter K02071 metN; D-methionine transport system ATP-binding protein
D BINDI_0449 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0450 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0999 ABC superfamily transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0451 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D BINDI_0452 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D BINDI_0453 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BINDI_1304 iron ABC transporter periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D BINDI_1305 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D BINDI_1306 enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D BINDI_1307 ABC transporter K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D BINDI_0008 ABC-type cobalt transport system, permease component CbiQ-related transporter K16785 ecfT; energy-coupling factor transport system permease protein
D BINDI_0601 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D BINDI_0600 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D BINDI_0602 ABC transporter K20459 nukF; lantibiotic transport system ATP-binding protein
D BINDI_0435 putative periplasmic K20491 nisE; lantibiotic transport system permease protein
D BINDI_0436 bacteriocin ABC transporter K20492 nisG; lantibiotic transport system permease protein
D BINDI_0434 mutacin ABC transporter, ATP-binding protein MutF K20490 nisF; lantibiotic transport system ATP-binding protein
D BINDI_0976 cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D BINDI_0977 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D BINDI_0790 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BINDI_0789 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BINDI_1078 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_0673 ABC transporter, permease/ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_1077 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_0672 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_0184 CydC, cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D BINDI_0183 CydD, cytochrome D ABC superfamily ATP binding cassette transporter, ATP-binding and permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:bii03070]
D BINDI_1165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BINDI_0636 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BINDI_1080 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BINDI_0618 putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D BINDI_1363 membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BINDI_0480 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BINDI_1281 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor
D BINDI_0213 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bii02020]
D BINDI_1024 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D BINDI_0251 phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D BINDI_0059 putative DO serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D BINDI_1366 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BINDI_0438 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D BINDI_0437 two component transcriptional regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D BINDI_0434 mutacin ABC transporter, ATP-binding protein MutF K20490 nisF; lantibiotic transport system ATP-binding protein
D BINDI_0435 putative periplasmic K20491 nisE; lantibiotic transport system permease protein
D BINDI_0436 bacteriocin ABC transporter K20492 nisG; lantibiotic transport system permease protein
D BINDI_1268 pilus assembly protein, probably tadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BINDI_1267 pilus assembly protein, probably tadB K12510 tadB; tight adherence protein B
D BINDI_1279 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D BINDI_0838 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0381 putative glutamine synthetase type I, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0273 Transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BINDI_0181 CydA, cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D BINDI_0182 CydB, cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D BINDI_1015 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bii02024]
D BINDI_0960 S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D BINDI_1310 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BINDI_1309 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D BINDI_1147 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BINDI_1148 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BINDI_0131 RCC1 repeat-containing protein K20276 bapA; large repetitive protein
D BINDI_0684 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0557 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0273 Transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BINDI_0449 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0450 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0999 ABC superfamily transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0451 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D BINDI_0452 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D BINDI_0453 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BINDI_0966 peptide/nickel ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BINDI_1217 ABC superfamily ATP binding cassette transporter solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BINDI_0965 peptide ABC transporter substrate-binding protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BINDI_0964 peptide ABC transporter substrate-binding protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BINDI_0963 oligopeptide transport protein of the ABC superfamily, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BINDI_0962 oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D BINDI_1363 membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BINDI_1165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BINDI_0636 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BINDI_1080 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BINDI_0618 putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D BINDI_0480 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BINDI_1281 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor
D BINDI_0213 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BINDI_0438 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D BINDI_0437 two component transcriptional regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D BINDI_0434 mutacin ABC transporter, ATP-binding protein MutF K20490 nisF; lantibiotic transport system ATP-binding protein
D BINDI_0435 putative periplasmic K20491 nisE; lantibiotic transport system permease protein
D BINDI_0436 bacteriocin ABC transporter K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D BINDI_0487 RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BINDI_0762 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bii01501]
D BINDI_0449 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0450 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0999 ABC superfamily transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0451 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D BINDI_0452 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D BINDI_0453 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BINDI_0395 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bii01502]
D BINDI_0197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_1356 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_0958 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BINDI_0397 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BINDI_0398 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BINDI_0401 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D BINDI_0510 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bii01000]
C 01001 Protein kinases [BR:bii01001]
D BINDI_0041 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BINDI_0040 putative serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BINDI_0484 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BINDI_0291 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BINDI_1024 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D BINDI_0438 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D BINDI_0858 two component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D BINDI_0755 Sensory transduction protein kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bii01009]
D BINDI_1054 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BINDI_0044 phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:bii01002]
D BINDI_0371 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BINDI_0706 putative peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D BINDI_1149 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D BINDI_1152 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D BINDI_0719 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BINDI_1020 NlpC/P60 domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D BINDI_0975 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D BINDI_0940 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BINDI_0677 glutamine amidotransferase class-II K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D BINDI_0970 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BINDI_0430 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BINDI_0232 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D BINDI_0246 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D BINDI_0039 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D BINDI_1243 dipeptidase A K08659 pepDA; dipeptidase [EC:3.4.-.-]
D BINDI_0190 CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D BINDI_0192 CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D BINDI_1150 CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D BINDI_0304 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D BINDI_0984 peptidase family M13 protein K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D BINDI_1173 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BINDI_0982 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BINDI_0412 xaa-Pro aminopeptidase I K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BINDI_1005 ATP-dependent zinc metallopeptidase involved in cell division K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BINDI_0062 heat shock HtpX endopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D BINDI_0059 putative DO serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D BINDI_0047 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BINDI_0269 protease II PtrB K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D BINDI_1008 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BINDI_0520 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BINDI_0521 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BINDI_0352 peptidase S16, lon domain-containing protein K07177 K07177; Lon-like protease
D BINDI_0388 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D BINDI_0743 putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D BINDI_0238 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BINDI_1042 peptidase S51 dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
C 01003 Glycosyltransferases [BR:bii01003]
D BINDI_0276 apolipoprotein n-acyltransferase Lnt/dolichol-phosphate-mannosyl transferase Dpm1 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D BINDI_0101 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D BINDI_0767 phosphatidyl-myo-inositol alpha-mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D BINDI_0623 phosphatidylinositol alpha-mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D BINDI_1009 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D BINDI_0992 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BINDI_0851 glycosyltransferase, group 2 family protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D BINDI_0071 trehalose 6-phosphate synthase/phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bii01005]
D BINDI_0992 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bii01011]
D BINDI_0193 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BINDI_1117 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BINDI_0402 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BINDI_0399 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BINDI_0417 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BINDI_0197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_1356 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BINDI_0958 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BINDI_0343 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BINDI_0398 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BINDI_0401 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BINDI_0630 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BINDI_1354 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D BINDI_0395 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BINDI_0042 penicillin binding protein transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D BINDI_1008 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BINDI_1020 NlpC/P60 domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D BINDI_0975 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D BINDI_0232 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D BINDI_0246 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D BINDI_0039 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D BINDI_0707 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:bii01004]
D BINDI_0818 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D BINDI_1002 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D BINDI_0684 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0557 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0483 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bii01008]
D BINDI_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:bii01006]
D BINDI_0485 probably bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D BINDI_0360 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BINDI_0467 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BINDI_1032 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:bii01007]
D BINDI_0179 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BINDI_1238 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D BINDI_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BINDI_0032 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BINDI_0216 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BINDI_1180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BINDI_0105 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BINDI_0340 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BINDI_1218 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BINDI_0542 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BINDI_1033 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BINDI_0497 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BINDI_0496 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BINDI_0365 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BINDI_1044 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BINDI_0987 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BINDI_0626 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BINDI_0709 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BINDI_0829 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BINDI_0828 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BINDI_1167 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BINDI_0376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_1124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BINDI_0998 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BINDI_0823 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D BINDI_0682 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bii00194]
D BINDI_1200 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BINDI_1201 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BINDI_1202 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BINDI_1203 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BINDI_1204 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BINDI_1205 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BINDI_1206 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BINDI_1207 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bii03000]
D BINDI_0915 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_1300 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_0791 putative AraC-type DNA-binding domain-containing protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D BINDI_0776 putative LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BINDI_0024 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BINDI_0085 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BINDI_0339 periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BINDI_0363 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BINDI_0081 LacI-type transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D BINDI_1029 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D BINDI_1112 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D BINDI_0094 putative MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D BINDI_0468 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D BINDI_0947 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BINDI_0273 Transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BINDI_0150 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D BINDI_0750 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BINDI_0754 cell division transcription factor WhmD K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BINDI_0056 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BINDI_1359 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BINDI_0740 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BINDI_0821 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D BINDI_0633 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D BINDI_1257 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D BINDI_0390 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D BINDI_0392 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bii03021]
D BINDI_1070 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BINDI_0285 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BINDI_0286 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BINDI_0887 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BINDI_0487 RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D BINDI_0419 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D BINDI_1066 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D BINDI_0893 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BINDI_1164 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D BINDI_0757 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D BINDI_1220 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bii03019]
D BINDI_1172 ribonuclease E/G family protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D BINDI_0221 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BINDI_0299 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D BINDI_0990 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D BINDI_0961 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BINDI_0762 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BINDI_1156 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BINDI_1220 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BINDI_0091 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D BINDI_0862 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BINDI_1270 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D BINDI_1351 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D BINDI_0640 ATP-binding protein (contains P-loop) K06958 rapZ; RNase adapter protein RapZ
D BINDI_0583 helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D BINDI_0383 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:bii03011]
D BINDI_0735 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BINDI_0560 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BINDI_1094 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BINDI_0713 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BINDI_1083 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BINDI_0165 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BINDI_0897 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BINDI_1086 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BINDI_1103 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BINDI_1101 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BINDI_1071 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BINDI_0898 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BINDI_1072 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BINDI_1087 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BINDI_1157 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BINDI_0211 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BINDI_1091 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BINDI_0167 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BINDI_1096 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BINDI_0680 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BINDI_1162 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BINDI_1097 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BINDI_1100 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BINDI_1099 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BINDI_1088 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BINDI_1085 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BINDI_0168 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BINDI_1138 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BINDI_1163 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BINDI_1137 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BINDI_1104 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BINDI_1090 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BINDI_1081 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BINDI_1093 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BINDI_1069 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BINDI_1084 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BINDI_0237 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BINDI_0433 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BINDI_1171 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BINDI_1095 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BINDI_1098 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BINDI_1089 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BINDI_1170 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BINDI_0202 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BINDI_1092 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BINDI_1082 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BINDI_0996 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BINDI_0222 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BINDI_1119 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BINDI_1365 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BINDI_0432 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BINDI_1073 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BINDI_0683 50S ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D BINDI_3rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_1rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_2rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_1rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_2rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_3rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_1rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_2rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_3rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bii03009]
D BINDI_0221 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BINDI_0990 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D BINDI_0685 GTP-binding protein Era K03595 era; GTPase
D BINDI_1169 GTP1/OBG sub domain protein K03979 obgE; GTPase [EC:3.6.5.-]
D BINDI_1066 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D BINDI_0893 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BINDI_1164 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D BINDI_1348 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BINDI_0384 16S RNA methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D BINDI_0204 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BINDI_0690 RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BINDI_1361 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BINDI_0393 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BINDI_0102 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BINDI_0813 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BINDI_1341 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BINDI_0565 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BINDI_0969 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BINDI_0609 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BINDI_0372 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BINDI_0548 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D BINDI_0209 16S rrNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D BINDI_1172 ribonuclease E/G family protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D BINDI_0708 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D BINDI_0608 GTP-binding protein K03977 engA; GTPase
D BINDI_0385 small GTP-binding protein K03665 hflX; GTPase
D BINDI_0993 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BINDI_0494 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BINDI_1064 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D BINDI_0534 iojap-like protein K09710 ybeB; ribosome-associated protein
D BINDI_0687 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D BINDI_0773 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D BINDI_0223 putative metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bii03016]
D BINDI_0179 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BINDI_0987 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BINDI_0340 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BINDI_0542 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BINDI_0105 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BINDI_1180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BINDI_1033 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BINDI_0497 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BINDI_0709 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BINDI_0365 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BINDI_0626 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BINDI_1044 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BINDI_0216 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BINDI_1218 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BINDI_0496 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BINDI_0829 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BINDI_0828 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BINDI_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BINDI_0032 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BINDI_0404 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D BINDI_0689 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BINDI_0671 methyltransferase domain protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D BINDI_1013 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D BINDI_1068 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BINDI_1063 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BINDI_0993 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BINDI_0467 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BINDI_0230 tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56]
D BINDI_0518 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D BINDI_1238 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D BINDI_0068 Cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D BINDI_0466 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D BINDI_0205 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BINDI_0282 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D BINDI_0830 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D BINDI_0969 23S RNA-specific pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BINDI_0058 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BINDI_1007 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BINDI_0547 metal-dependent protease, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BINDI_0549 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BINDI_0546 ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BINDI_1156 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bii03012]
D BINDI_1065 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BINDI_0431 translation initiation factor IF3 K02520 infC; translation initiation factor IF-3
D BINDI_0561 translation elongation factor Ts K02357 tsf; elongation factor Ts
D BINDI_0895 translation elongation factor Tu K02358 tuf; elongation factor Tu
D BINDI_0896 translation elongation factor G K02355 fusA; elongation factor G
D BINDI_0995 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D BINDI_0563 ribosome recycling factor K02838 frr; ribosome recycling factor
D BINDI_0994 methylase protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BINDI_0764 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BINDI_1074 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BINDI_0894 translation elongation factor P K02356 efp; elongation factor P
D BINDI_0978 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bii03110]
D BINDI_1235 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D BINDI_0855 ATP-dependent clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D BINDI_0522 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BINDI_0091 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D BINDI_0862 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BINDI_0632 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D BINDI_0093 chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BINDI_0092 GrpE protein K03687 GRPE; molecular chaperone GrpE
D BINDI_1075 Hsp20-family heat shock chaperone K13993 HSP20; HSP20 family protein
D BINDI_1125 chaperone GroES K04078 groES; chaperonin GroES
D BINDI_1005 ATP-dependent zinc metallopeptidase involved in cell division K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BINDI_1207 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BINDI_0510 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BINDI_0262 thioredoxin K03671 TXN; thioredoxin
D BINDI_1189 putative thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:bii04131]
D BINDI_0424 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BINDI_0650 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_1031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_0730 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:bii04121]
D BINDI_0879 hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:bii03051]
D BINDI_0882 AAA family ATPase K13527 mpa; proteasome-associated ATPase
D BINDI_0878 proteasome accessory factor PafA K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D BINDI_0881 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:bii03032]
D BINDI_1049 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BINDI_0915 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_1300 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_0877 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BINDI_1366 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BINDI_1277 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BINDI_0955 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BINDI_0985 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0166 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0917 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0373 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BINDI_1367 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BINDI_0545 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BINDI_1244 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BINDI_0418 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BINDI_1262 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BINDI_0239 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BINDI_0841 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BINDI_1372 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BINDI_0489 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BINDI_1371 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BINDI_0488 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BINDI_1246 topA DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bii03036]
D BINDI_0915 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_1300 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_0221 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BINDI_0877 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BINDI_1366 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BINDI_0019 Non-specific DNA-binding protein Dps, ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D BINDI_0414 Chromosome partition protein smc K03529 smc; chromosome segregation protein
D BINDI_0441 Segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D BINDI_0442 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D BINDI_0977 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D BINDI_0395 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BINDI_0753 DNA segregation ATPase-related protein (FtsK/SpoIIIE family) K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BINDI_0471 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BINDI_0403 cell division protein K03589 ftsQ; cell division protein FtsQ
D BINDI_0400 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D BINDI_0976 cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D BINDI_0367 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BINDI_0368 hypothetical protein with DUF552 domain K09772 sepF; cell division inhibitor SepF
D BINDI_0440 Soj family protein K03496 parA; chromosome partitioning protein
D BINDI_1360 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D BINDI_1359 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BINDI_1361 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BINDI_0448 integrase/recombinase K03733 xerC; integrase/recombinase XerC
D BINDI_0439 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D BINDI_0840 ParA/MinD ATPase-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D BINDI_1289 Fic domain protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D BINDI_0470 cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D BINDI_0639 putative transcriptional regulatory protein whia K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:bii03400]
D BINDI_0865 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BINDI_0283 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BINDI_1216 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BINDI_0493 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BINDI_0645 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D BINDI_0986 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BINDI_0841 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BINDI_0644 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D BINDI_0701 excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D BINDI_0733 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D BINDI_0643 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D BINDI_0716 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0350 DNA helicase II containing UvrD/REP helicase domain K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0294 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BINDI_0285 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BINDI_0286 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BINDI_1070 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BINDI_0887 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BINDI_0763 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BINDI_0327 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BINDI_0326 Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BINDI_0373 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BINDI_1367 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BINDI_0545 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BINDI_1244 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BINDI_0418 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BINDI_1262 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BINDI_0985 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0166 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0917 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0509 Type II vsr-like G/T DNA mismatch repair endonuclease of unknown recognition sequence K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D BINDI_0476 RecA protein K03553 recA; recombination protein RecA
D BINDI_0620 crossover junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BINDI_0619 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BINDI_0621 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BINDI_0885 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BINDI_1053 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D BINDI_1369 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BINDI_0203 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BINDI_0359 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D BINDI_1261 recombination protein RecR K06187 recR; recombination protein RecR
D BINDI_0524 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D BINDI_1372 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BINDI_0489 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BINDI_1371 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BINDI_0488 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BINDI_1246 topA DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BINDI_0877 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BINDI_0961 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BINDI_1107 DNA-directed DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D BINDI_0744 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V
D BINDI_0743 putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D BINDI_0388 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D BINDI_0478 RecX-like protein K03565 recX; regulatory protein
D BINDI_1271 hydrolase, NUDIX family K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D BINDI_1121 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BINDI_1120 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BINDI_1123 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bii03029]
D BINDI_1065 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BINDI_0431 translation initiation factor IF3 K02520 infC; translation initiation factor IF-3
D BINDI_0561 translation elongation factor Ts K02357 tsf; elongation factor Ts
D BINDI_0895 translation elongation factor Tu K02358 tuf; elongation factor Tu
D BINDI_0896 translation elongation factor G K02355 fusA; elongation factor G
D BINDI_0685 GTP-binding protein Era K03595 era; GTPase
D BINDI_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BINDI_0542 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BINDI_0497 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BINDI_0365 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BINDI_1180 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BINDI_1226 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BINDI_1225 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BINDI_1227 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BINDI_0985 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0166 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0917 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BINDI_0091 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D BINDI_0092 GrpE protein K03687 GRPE; molecular chaperone GrpE
D BINDI_0862 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BINDI_1125 chaperone GroES K04078 groES; chaperonin GroES
D BINDI_0632 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D BINDI_0093 chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BINDI_0840 ParA/MinD ATPase-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D BINDI_1363 membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bii02000]
D BINDI_0790 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D BINDI_0789 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D BINDI_1078 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_0673 ABC transporter, permease/ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_1077 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_0672 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BINDI_0010 putative ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BINDI_0184 CydC, cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D BINDI_0183 CydD, cytochrome D ABC superfamily ATP binding cassette transporter, ATP-binding and permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D BINDI_0218 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D BINDI_0176 Solute binding protein of ABC transporter system K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D BINDI_0769 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D BINDI_0770 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D BINDI_1343 ATP binding protein of ABC transporter for sugars K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BINDI_0080 MalE-type ABC sugar transport system periplasmic component K25086 musE; maltose transport system substrate-binding protein
D BINDI_0087 Solute-binding protein ABC transporter (MalE family) K25086 musE; maltose transport system substrate-binding protein
D BINDI_0088 Permease protein of ABC transporter system for sugars K25087 musF; maltose transport system permease protein
D BINDI_0082 Permease protein of ABC transporter system for sugars K25087 musF; maltose transport system permease protein
D BINDI_0089 Permease protein of ABC transporter system for sugars K25088 musG; maltose transport system permease protein
D BINDI_0083 Permease protein of ABC transporter system for sugars K25088 musG; maltose transport system permease protein
D BINDI_0025 putative ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0112 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0811 ABC superfamily ATP binding cassette transporter, binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_1028 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0302 extracellular solute-binding protein, family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D BINDI_0026 putative ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0113 binding-protein-dependent transporter inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0810 sugar ABC superfamily ATP binding cassette transporter, membrane protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_1027 ABC transporter integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0301 ABC transporter membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0027 putative ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0114 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0808 putative sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_1026 ABC transporter integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0300 ABC transporter K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D BINDI_0664 sugar ABC superfamily ATP binding cassette transporter, binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D BINDI_0662 ABC-type xylose transport system, permease component K10547 gguB; putative multiple sugar transport system permease protein
D BINDI_0663 xylose ABC transporter ATPase K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BINDI_1144 ABC-type sugar transporter periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D BINDI_1143 ABC transporter membrane protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D BINDI_1142 ABC transporter membrane protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D BINDI_0666 ABC superfamily ATP binding cassette transporter ABC protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BINDI_0251 phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D BINDI_0252 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D BINDI_0253 ABC-type phosphate transporter, permease component K02038 pstA; phosphate transport system permease protein
D BINDI_0254 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BINDI_0504 glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein
D BINDI_0503 putative amino acid ABC transporter K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D BINDI_0541 family 3 extracellular solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D BINDI_0499 family 3 extracellular solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D BINDI_0500 permease protein of ABC transporter for glutamate K10006 gluC; glutamate transport system permease protein
D BINDI_0501 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein
D BINDI_0498 glutamate transport ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D BINDI_0933 D-methionine ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein
D BINDI_0934 D-methionine ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein
D BINDI_0935 D-methionine ABC transporter K02072 metI; D-methionine transport system permease protein
D BINDI_0936 D-methionine ABC transporter K02071 metN; D-methionine transport system ATP-binding protein
D BINDI_0973 ABC transporter, substrate-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BINDI_1058 Solute-binding protein of ABC transporter system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BINDI_1193 ABC superfamily ATP binding cassette K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BINDI_0972 permease protein of ABC transporter system K02029 ABC.PA.P; polar amino acid transport system permease protein
D BINDI_1059 amino acid ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D BINDI_1196 permease of ABC transporter system K02029 ABC.PA.P; polar amino acid transport system permease protein
D BINDI_1197 ABC superfamily ATP binding cassette K02029 ABC.PA.P; polar amino acid transport system permease protein
D BINDI_0971 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D BINDI_1060 ABC superfamily ATP binding cassette transporter, ABC protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D BINDI_0449 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0450 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0999 ABC superfamily transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D BINDI_0451 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D BINDI_0452 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D BINDI_0453 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D BINDI_0966 peptide/nickel ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BINDI_1217 ABC superfamily ATP binding cassette transporter solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BINDI_0965 peptide ABC transporter substrate-binding protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BINDI_0964 peptide ABC transporter substrate-binding protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BINDI_0963 oligopeptide transport protein of the ABC superfamily, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BINDI_0962 oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D BINDI_1304 iron ABC transporter periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D BINDI_1305 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D BINDI_1306 enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D BINDI_1307 ABC transporter K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D BINDI_0674 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D BINDI_0009 Permeases of the major facilitator superfamily K16926 htsT; energy-coupling factor transport system substrate-specific component
D BINDI_0008 ABC-type cobalt transport system, permease component CbiQ-related transporter K16785 ecfT; energy-coupling factor transport system permease protein
D BINDI_0007 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D BINDI_0853 fused ATP binding protein and permease of ABC transporter K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D BINDI_0832 ATP binding protein of ABC transporter K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D BINDI_0833 ABC-type transporter, permease component K16925 ykoE; energy-coupling factor transport system permease protein
D BINDI_1000 ABC transporter K16925 ykoE; energy-coupling factor transport system permease protein
D BINDI_0944 ABC transporter solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D BINDI_0738 zinc/manganese ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D BINDI_0737 zinc/manganese ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D BINDI_0602 ABC transporter K20459 nukF; lantibiotic transport system ATP-binding protein
D BINDI_0601 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D BINDI_0600 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D BINDI_0435 putative periplasmic K20491 nisE; lantibiotic transport system permease protein
D BINDI_0436 bacteriocin ABC transporter K20492 nisG; lantibiotic transport system permease protein
D BINDI_0434 mutacin ABC transporter, ATP-binding protein MutF K20490 nisF; lantibiotic transport system ATP-binding protein
D BINDI_0976 cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D BINDI_0977 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D BINDI_0798 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D BINDI_0160 polysaccharide ABC transporter membrane-spanning protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BINDI_0592 putative permease of the major facilitator family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BINDI_1228 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BINDI_0799 daunorubicin resistance ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BINDI_0161 sugar ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BINDI_1229 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BINDI_0593 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BINDI_0002 ABC transporter inner membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BINDI_0005 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BINDI_1297 ABC transporter integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BINDI_1324 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BINDI_1325 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BINDI_0004 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BINDI_0128 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BINDI_0001 ABC superfamily ATP binding cassette transporter, ABC protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BINDI_0006 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BINDI_0127 ATP-binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BINDI_1298 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BINDI_1323 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BINDI_0696 FeS assembly protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D BINDI_1278 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D BINDI_0315 oligosaccharide/H symporter, major facilitator superfamily (MFS) K02532 lacY; MFS transporter, OHS family, lactose permease
D BINDI_0362 Raffinose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D BINDI_1319 transporter, major facilitator family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D BINDI_1338 transporter, major facilitator family K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D BINDI_0129 major facilitator superfamily transporter permease K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D BINDI_1253 transporter, major facilitator family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D BINDI_0610 MIP family major intrinsic protein channel protein K06188 aqpZ; aquaporin Z
D BINDI_0133 MIP family glycerol uptake facilitator protein GlpF K02440 glpF; glycerol uptake facilitator
D BINDI_1280 ammonium transporter K03320 amt; ammonium transporter, Amt family
D BINDI_0871 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D BINDI_1131 MscL family large conductance mechanosensitive ion channel K03282 mscL; large conductance mechanosensitive channel
D BINDI_0540 Magnesium and cobalt transport protein corA K03284 corA; magnesium transporter
D BINDI_0771 CrcB-like protein K06199 crcB; fluoride exporter
D BINDI_0772 putative camphor resistance protein CrcB2 K06199 crcB; fluoride exporter
D BINDI_0020 Putative Hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BINDI_0686 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BINDI_1331 amino acid transporter K11733 lysP; lysine-specific permease
D BINDI_1332 amino acid transporter K11733 lysP; lysine-specific permease
D BINDI_0387 cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D BINDI_0118 putative gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D BINDI_0139 Na/H antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D BINDI_0066 sodium/hydrogen exchanger K24163 nhaK; monovalent cation/hydrogen antiporter
D BINDI_0257 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D BINDI_0048 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D BINDI_0149 manganese transporter K03322 mntH; manganese transport protein
D BINDI_0338 C4-dicarboxylate anaerobic carrier K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D BINDI_1354 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D BINDI_1174 transporter K13936 mdcF; malonate transporter and related proteins
D BINDI_0255 auxin efflux carrier family transporter K24180 mleP; malate permease and related proteins
D BINDI_0109 K transporter K03549 kup; KUP system potassium uptake protein
D BINDI_0428 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D BINDI_0427 putative branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump
D BINDI_0852 hypothetical protein K23675 fmnP; riboflavin transporter
D BINDI_0400 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D BINDI_1213 hypothetical protein K23242 mntP; manganese efflux pump family protein
D BINDI_1328 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D BINDI_1327 Fe2 high-affinity transport protein K07230 p19; periplasmic iron binding protein
D BINDI_0318 Excalibur domain protein K03646 tolA; colicin import membrane protein
D BINDI_0648 MgtC family magnesium (Mg2 ) transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D BINDI_0084 hypothetical protein K25089 musI; membrane protein
C 02044 Secretion system [BR:bii02044]
D BINDI_0706 putative peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D BINDI_1268 pilus assembly protein, probably tadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BINDI_1267 pilus assembly protein, probably tadB K12510 tadB; tight adherence protein B
D BINDI_0369 hypothetical protein K02221 yggT; YggT family protein
D BINDI_0543 competence protein ComEA K02237 comEA; competence protein ComEA
D BINDI_0544 ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
D BINDI_0480 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BINDI_1165 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BINDI_0636 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D BINDI_1080 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BINDI_0213 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BINDI_1281 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor
D BINDI_0618 putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D BINDI_1363 membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:bii02042]
D BINDI_0020 Putative Hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BINDI_0686 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BINDI_0756 hemolysin III-like membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bii02022]
D BINDI_1024 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D BINDI_0438 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D BINDI_0437 two component transcriptional regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D BINDI_0858 two component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D BINDI_0859 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D BINDI_0755 Sensory transduction protein kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D BINDI_0728 two-component system response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:bii02035]
D BINDI_0706 putative peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D BINDI_1268 pilus assembly protein, probably tadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bii04812]
D BINDI_0367 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BINDI_0440 Soj family protein K03496 parA; chromosome partitioning protein
D BINDI_1360 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D BINDI_1359 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bii04147]
D BINDI_0762 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BINDI_0424 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BINDI_0638 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BINDI_0730 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BINDI_0510 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BINDI_0862 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BINDI_0091 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D BINDI_0236 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BINDI_0047 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BINDI_0991 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BINDI_0555 GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BINDI_0895 translation elongation factor Tu K02358 tuf; elongation factor Tu
D BINDI_0689 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BINDI_0386 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BINDI_0684 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_0557 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BINDI_1054 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BINDI_1079 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BINDI_0617 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BINDI_0819 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BINDI_0820 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BINDI_0279 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BINDI_0838 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0381 putative glutamine synthetase type I, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BINDI_0613 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BINDI_0836 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BINDI_0124 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BINDI_0637 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BINDI_0650 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BINDI_1031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bii02048]
D BINDI_0015 Type I restriction-modification system restriction (R) subunit of unknown recognition sequence K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D BINDI_0013 Type I restriction-modification system specificity (S) subunit of unknown recognition sequence K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D BINDI_0014 Type I restriction-modification system N6-adenine DNA methyltransferase (M) subunit of unknown recognition sequence K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D BINDI_0915 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_1300 Type II cytosine-5 DNA methyltransferase of unknown recognition sequence K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BINDI_0367 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BINDI_0179 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:bii04090]
D BINDI_0047 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:bii01504]
D BINDI_1338 transporter, major facilitator family K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D BINDI_1012 translation elongation factors K18220 tetM; ribosomal protection tetracycline resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bii03100]
D BINDI_tRNA1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BINDI_tRNA5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BINDI_tRNA15 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BINDI_tRNA29 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA12 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA11 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA43 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BINDI_tRNA16 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BINDI_tRNA32 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BINDI_tRNA19 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BINDI_tRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BINDI_tRNA8 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BINDI_tRNA31 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BINDI_tRNA7 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BINDI_tRNA4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA41 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA18 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BINDI_tRNA27 tRNA-His K14226 tRNA-His; tRNA His
D BINDI_tRNA2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BINDI_tRNA3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA9 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BINDI_tRNA45 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BINDI_tRNA46 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BINDI_tRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D BINDI_tRNA30 tRNA-Met K14230 tRNA-Met; tRNA Met
D BINDI_tRNA44 tRNA-Met K14230 tRNA-Met; tRNA Met
D BINDI_tRNA33 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BINDI_tRNA17 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BINDI_tRNA34 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BINDI_tRNA23 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BINDI_tRNA35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA6 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BINDI_tRNA47 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BINDI_tRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BINDI_tRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BINDI_tRNA42 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BINDI_tRNA40 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BINDI_tRNA21 tRNA-Val K14237 tRNA-Val; tRNA Val
D BINDI_tRNA13 tRNA-Val K14237 tRNA-Val; tRNA Val
D BINDI_tRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val
D BINDI_1rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_2rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_3rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BINDI_1rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_2rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_3rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BINDI_3rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_1rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BINDI_2rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BINDI_0248 2,5-diketo-D-gluconate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D BINDI_0227 aldo/keto reductase family oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D BINDI_0429 peptide methionine sulfoxide reductase MsrA/MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D BINDI_0022 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D BINDI_0957 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D BINDI_0061 putative NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D BINDI_0178 anaerobic ribonucleoside-triphosphate reductase small subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D BINDI_0517 pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D BINDI_1321 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D BINDI_0201 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D BINDI_0570 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BINDI_1334 ApbE family thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D BINDI_0145 Carbohydrate kinase, PfkB K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D BINDI_0660 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D BINDI_1256 phosphotriesterase family protein K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D BINDI_0292 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D BINDI_0535 phosphoglycerate mutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D BINDI_0346 PHP C-terminal domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D BINDI_0670 Phosphohistidine phosphatase sixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D BINDI_0108 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BINDI_1199 nuclease of the RecB family protein K07503 nucS; endonuclease [EC:3.1.-.-]
D BINDI_0807 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D BINDI_0214 hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D BINDI_0907 Lysin, N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BINDI_0306 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BINDI_0559 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BINDI_0135 peptidoglycan GlcNAc deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D BINDI_0146 Sugar isomerase K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D BINDI_0867 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D BINDI_0289 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D BINDI_0649 sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D BINDI_0416 Putative ATP-grasp superfamily protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D BINDI_0067 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D BINDI_1296 cation-transporting ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D BINDI_0459 Cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D BINDI_0694 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D BINDI_1122 ribonucleotide-diphosphate reductase subunit gamma K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D BINDI_1237 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D BINDI_1347 G5 domain-containing protein K21688 rpfB; resuscitation-promoting factor RpfB
D BINDI_0876 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D BINDI_0065 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D BINDI_0857 cold-shock domain protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D BINDI_0519 trigger factor K03545 tig; trigger factor
D BINDI_0974 SsrA-binding protein K03664 smpB; SsrA-binding protein
D BINDI_1198 glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D BINDI_0781 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D BINDI_1232 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D BINDI_0311 DNA repair protein, HhH-GPD family K07457 K07457; endonuclease III related protein
D BINDI_0780 putative endonuclease K07460 yraN; putative endonuclease
D BINDI_0782 putative DNA protecting protein DprA K04096 smf; DNA processing protein
D BINDI_0505 recombination factor protein RarA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D BINDI_1329 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D BINDI_1330 aromatic amino acid transport protein AroP K03293 TC.AAT; amino acid transporter, AAT family
D BINDI_1110 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D BINDI_0795 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D BINDI_1362 R3H domain protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D BINDI_0443 stress response membrane GTPase K06207 typA; GTP-binding protein
D BINDI_0280 ACT domain protein K07166 K07166; ACT domain-containing protein
D BINDI_0688 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D BINDI_1025 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D BINDI_0731 putative tellurium resistance protein K05794 terC; tellurite resistance protein TerC
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BINDI_0698 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D BINDI_0697 ABC-type transport system protein K09015 sufD; Fe-S cluster assembly protein SufD
D BINDI_0099 DedA integral membrane protein K03975 dedA; membrane-associated protein
D BINDI_0052 Phage infection protein K01421 yhgE; putative membrane protein
D BINDI_0053 pip4 phage infection protein K01421 yhgE; putative membrane protein
C 99997 Function unknown
D BINDI_0462 putative Integral membrane protein K06890 K06890; uncharacterized protein
D BINDI_0125 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D BINDI_0057 Sodium/dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D BINDI_0210 putative RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein
D BINDI_0141 FMN reductase K07118 K07118; uncharacterized protein
D BINDI_1364 hypothetical protein K08998 K08998; uncharacterized protein
D BINDI_0760 putative septum formation initiator family protein K09009 K09009; uncharacterized protein
D BINDI_0766 putative membrane protein K09118 K09118; uncharacterized protein
D BINDI_0281 hypothetical protein K09157 K09157; uncharacterized protein
D BINDI_1056 Cupin superfamily protein K09705 K09705; uncharacterized protein
D BINDI_0539 hypothetical protein K09974 K09974; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 31, 2024