+E Replication protein KO
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DNA Replication Proteins - Halalkalibacter krulwichiae
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D BkAM31D_11555 rnhA_2; 14.7 kDa ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BkAM31D_13780 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BkAM31D_03390 rnhA_1; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D BkAM31D_19745 hup_2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BkAM31D_05065 hup_1; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BkAM31D_00005 dnaA_1; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BkAM31D_21215 dnaB_2; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BkAM31D_25255 dnaC_2; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BkAM31D_02240 dnaC_1; DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D BkAM31D_05440 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BkAM31D_18585 dnaB_1; Replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D BkAM31D_18580 dnaI; Primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D BkAM31D_02290 ssb_1; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D BkAM31D_21145 ssb_2; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D BkAM31D_25295 ssb_3; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E BkAM31D_18710 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E BkAM31D_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E BkAM31D_05220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E BkAM31D_00215 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E BkAM31D_09790 polC_1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E BkAM31D_24310 polC_3; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E BkAM31D_24780 polC_4; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E BkAM31D_00145 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E BkAM31D_11555 rnhA_2; 14.7 kDa ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BkAM31D_13780 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BkAM31D_03390 rnhA_1; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BkAM31D_14855 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E BkAM31D_02050 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E BkAM31D_13035 ypcP; 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E BkAM31D_11555 rnhA_2; 14.7 kDa ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BkAM31D_13780 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BkAM31D_03390 rnhA_1; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BkAM31D_14855 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C BkAM31D_00035 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C BkAM31D_00030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C BkAM31D_11800 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C BkAM31D_11795 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C BkAM31D_14820 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C BkAM31D_17470 topB_1; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C BkAM31D_24855 topB_2; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022