+D GENES KO #

  KEGG Orthology (KO) - Bartonella kosoy

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bky00010] D D1093_02000 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1093_03975 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_05755 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1093_00440 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1093_00435 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D1093_08295 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D D1093_05775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1093_00475 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1093_04985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D1093_05800 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D1093_05805 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D1093_05810 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_07110 zinc-binding dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:bky00020] D D1093_06120 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D D1093_01895 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1093_03960 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D1093_01265 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D D1093_01260 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_01270 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D1093_01275 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1093_00890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1093_00885 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1093_00900 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1093_00895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1093_00040 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1093_05800 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D1093_05805 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D1093_05810 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:bky00030] D D1093_02000 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1093_04635 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D1093_04640 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D D1093_04120 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D1093_00445 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1093_00610 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D D1093_06135 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1093_05225 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D D1093_04645 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D D1093_08485 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_03975 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:bky00040] D D1093_02215 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D1093_04120 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:bky00051] D D1093_03975 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_05755 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1093_01620 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:bky00052] D D1093_02215 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00053 Ascorbate and aldarate metabolism D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:bky00500] D D1093_02215 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1093_02000 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bky00520] D D1093_04025 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D1093_00235 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D D1093_04020 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D D1093_09405 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D1093_07855 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D1093_08100 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1093_02215 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D1093_01620 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D D1093_02000 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00620 Pyruvate metabolism [PATH:bky00620] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1093_05800 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D1093_05805 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D1093_05810 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_07110 zinc-binding dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D D1093_00475 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1093_01180 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1093_06925 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1093_06930 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1093_01515 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D1093_02680 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D D1093_01315 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D D1093_05265 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D D1093_01820 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D1093_07090 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1093_00040 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D D1093_04985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bky00630] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1093_06120 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D D1093_01895 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1093_03905 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_04625 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_07055 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1093_08515 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D D1093_08525 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_08520 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D D1093_08485 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:bky00640] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_01180 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1093_06925 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1093_06930 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1093_01515 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1093_01275 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1093_01270 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:bky00650] D D1093_00890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1093_00885 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1093_00900 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1093_00895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1093_07715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:bky00660] D D1093_07715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1093_01275 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1093_01270 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:bky00562] D D1093_00390 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D1093_02645 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D1093_05755 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bky00190] D D1093_06460 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D D1093_06465 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D D1093_06470 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D D1093_06475 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D D1093_06480 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D D1093_06485 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D D1093_06490 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D D1093_06495 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D D1093_06500 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D D1093_06505 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D D1093_06510 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D D1093_06515 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D D1093_06520 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D D1093_06525 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D D1093_00890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1093_00885 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1093_00900 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1093_00895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1093_05180 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D D1093_05185 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D1093_05190 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D D1093_04890 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D1093_01940 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D D1093_07065 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1093_01935 cytochrome (ubi)quinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D D1093_01930 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D D1093_01925 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D D1093_02520 cytochrome c family protein K08738 CYC; cytochrome c D D1093_00585 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D D1093_00575 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D D1093_00580 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D D1093_00590 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D D1093_00570 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D D1093_04745 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D D1093_04755 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D1093_04760 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D1093_04750 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D D1093_02185 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D D1093_04050 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bky00710] D D1093_00435 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D1093_00440 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_03975 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D1093_00445 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D1093_06135 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D1093_05755 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1093_04120 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D1093_00610 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D D1093_04985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D1093_01820 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D1093_07090 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:bky00720] D D1093_04985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1093_00040 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D D1093_00890 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D1093_00885 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D1093_00900 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D1093_00895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D1093_01270 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D1093_01275 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D1093_03960 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D1093_01895 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D D1093_01180 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1093_06925 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1093_06930 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1093_01515 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1093_01980 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D D1093_04650 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:bky00680] D D1093_07055 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1093_05775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_03975 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1093_08295 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D D1093_04485 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:bky00910] D D1093_01025 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D1093_03905 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_04625 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_01020 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bky00061] D D1093_01180 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D1093_06925 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D1093_06930 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D1093_01515 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D1093_05600 acyl carrier protein K02078 acpP; acyl carrier protein D D1093_05590 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D1093_07010 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1093_01955 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D D1093_05605 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_07100 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_07105 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_05595 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1093_01960 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D D1093_06075 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D1093_01950 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D1093_04840 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bky00071] D D1093_07110 zinc-binding dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:bky00074] D D1093_05450 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D D1093_05600 acyl carrier protein K02078 acpP; acyl carrier protein D D1093_05590 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bky00561] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D1093_07015 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D D1093_06850 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D1093_01155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:bky00564] D D1093_01945 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D D1093_06915 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D D1093_06850 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D1093_01155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D D1093_07140 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D D1093_02255 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D D1093_06055 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D D1093_06670 phosphatidylcholine/phosphatidylserine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D D1093_05530 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D D1093_05525 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D D1093_05690 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D D1093_02235 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bky00230] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1093_05225 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D D1093_05540 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D D1093_04820 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D D1093_04145 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D D1093_04090 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D D1093_04100 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D D1093_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D1093_04150 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D D1093_09325 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D D1093_00020 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D D1093_09320 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D D1093_04105 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D D1093_04115 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D D1093_00965 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D1093_05230 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D D1093_02240 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D D1093_05685 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D1093_01595 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D D1093_01040 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D1093_02250 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D1093_05615 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D D1093_02305 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D1093_02310 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D D1093_04000 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D D1093_05485 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D D1093_05435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D D1093_02115 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D D1093_04055 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D D1093_04490 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D1093_09360 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D D1093_03715 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D1093_07120 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] C 00240 Pyrimidine metabolism [PATH:bky00240] D D1093_05320 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D1093_08035 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D1093_06840 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D D1093_05495 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D D1093_06845 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D D1093_04535 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D D1093_05440 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D D1093_09020 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D D1093_06045 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D D1093_05685 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D1093_07120 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1093_01365 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D D1093_09290 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D D1093_05765 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D D1093_01725 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D D1093_09360 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D D1093_02675 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D D1093_02305 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D1093_02310 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D D1093_05485 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D D1093_04705 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D D1093_06710 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D D1093_00115 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D D1093_07745 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bky00250] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D D1093_02365 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D D1093_01090 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D D1093_04490 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D1093_04115 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D D1093_06840 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D D1093_01025 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D1093_03905 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_04625 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_05320 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D1093_08035 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D1093_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D1093_04025 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D1093_05540 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:bky00260] D D1093_04700 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1093_08545 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1093_03970 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D D1093_04900 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D D1093_04930 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D D1093_07055 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1093_08295 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D D1093_04485 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D1093_08515 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D D1093_08525 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_08520 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D D1093_05530 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D D1093_05995 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D D1093_03185 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] C 00270 Cysteine and methionine metabolism [PATH:bky00270] D D1093_02435 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D D1093_05230 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D D1093_01500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D D1093_04700 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1093_08545 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1093_03970 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D D1093_03980 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1093_04665 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D D1093_02530 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D D1093_01280 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D1093_05995 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D D1093_04485 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bky00280] D D1093_03980 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bky00290] D D1093_03185 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D D1093_07715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1093_07685 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D D1093_01805 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D D1093_03980 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:bky00300] D D1093_03970 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D D1093_04700 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1093_08545 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1093_05415 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D D1093_08290 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D D1093_01675 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D D1093_01850 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D1093_01585 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D D1093_01295 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D D1093_01080 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D1093_07890 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D1093_07885 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:bky00310] D D1093_01260 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:bky00220] D D1093_01090 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D D1093_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D1093_03905 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_04625 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_05320 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D1093_08035 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D1093_01025 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D D1093_02340 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D D1093_01660 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D D1093_07060 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D D1093_01850 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:bky00330] D D1093_08595 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D D1093_08475 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D D1093_01245 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D1093_04630 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D D1093_08255 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D D1093_02130 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D D1093_02135 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:bky00340] D D1093_03835 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:bky00350] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D D1093_07110 zinc-binding dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:bky00380] D D1093_01260 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bky00400] D D1093_06150 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D1093_01195 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D D1093_01920 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D D1093_01370 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D D1093_01190 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D D1093_01720 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D D1093_04845 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D D1093_01010 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D D1093_01110 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D D1093_02510 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:bky00410] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D1093_05475 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D D1093_01025 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D D1093_06690 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:bky00450] D D1093_06625 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D D1093_05300 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D D1093_06700 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:bky00460] D D1093_02365 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D D1093_07055 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bky00470] D D1093_08500 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D D1093_07850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1093_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D1093_06750 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D D1093_07875 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D1093_09700 L-alanine-dl-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D D1093_01295 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D D1093_01080 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:bky00480] D D1093_04665 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D D1093_02530 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D1093_02355 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D1093_05335 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D D1093_08285 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1093_06145 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D D1093_03960 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D1093_04635 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D1093_08475 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:bky00540] D D1093_06080 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D D1093_07830 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D D1093_06070 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D D1093_06085 DUF1009 domain-containing protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D D1093_06090 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D D1093_02660 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D D1093_02220 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D D1093_05770 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D D1093_02515 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D D1093_02655 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D D1093_07115 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bky00541] D D1093_02215 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D1093_04020 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D D1093_08100 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:bky00550] D D1093_09405 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D1093_07855 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D1093_07860 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D1093_07875 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D1093_07890 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D1093_07850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1093_07885 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D D1093_05585 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D D1093_07880 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D D1093_07865 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D D1093_05080 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_06580 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_07895 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D1093_06715 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:bky00552] D D1093_05585 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bky00730] D D1093_05370 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D D1093_01150 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D D1093_05345 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D D1093_06605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1093_05365 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D D1093_04860 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D D1093_05355 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D D1093_00335 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D D1093_05350 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D D1093_00505 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D D1093_03715 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:bky00740] D D1093_04850 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D D1093_07045 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D D1093_07035 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D D1093_07040 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D D1093_08845 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:bky00750] D D1093_04830 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D D1093_04485 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D1093_05625 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D D1093_07690 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D D1093_04930 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:bky00760] D D1093_01740 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D D1093_02140 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D D1093_07120 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1093_06155 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D D1093_05830 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D D1093_07945 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D D1093_06170 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:bky00770] D D1093_07715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D1093_07685 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D D1093_01805 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D D1093_05480 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D D1093_05475 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D D1093_02360 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D D1093_01525 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D D1093_07120 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D1093_03930 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D D1093_01375 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D D1093_05450 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D D1093_03980 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:bky00780] D D1093_01955 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D D1093_05605 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_07100 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_07105 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_05595 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1093_06075 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D1093_01950 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D1093_04840 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D1093_06530 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bky00785] D D1093_03820 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D D1093_05820 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05800 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D1093_05805 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D1093_05810 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D1093_01265 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D D1093_01260 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D1093_08515 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D D1093_08525 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1093_08520 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:bky00790] D D1093_06980 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D D1093_07740 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D D1093_01510 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D D1093_04850 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] C 00670 One carbon pool by folate [PATH:bky00670] D D1093_07740 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D D1093_01980 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D D1093_04650 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D D1093_07055 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D1093_04145 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D D1093_00965 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D1093_01690 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D D1093_08525 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D1093_07745 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D D1093_09355 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bky00860] D D1093_06125 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06160 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_04890 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D1093_07065 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1093_00940 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D D1093_00945 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D D1093_04125 flavin reductase K13786 cobR; cob(II)yrinic acid a,c-diamide reductase [EC:1.16.8.-] D D1093_06900 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bky00130] D D1093_08025 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D D1093_04825 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D D1093_04695 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D D1093_00720 ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D D1093_06665 UbiH/UbiF family hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D D1093_01535 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bky00900] D D1093_04860 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D D1093_05835 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D D1093_04795 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D D1093_00550 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D D1093_04895 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D D1093_00540 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D D1093_04780 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:bky00906] D D1093_05745 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D D1093_00445 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:bky00332] D D1093_02130 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D D1093_02135 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:bky00261] D D1093_04700 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D1093_08545 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D1093_05415 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D D1093_08290 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bky00521] D D1093_08995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D D1093_00390 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D1093_02645 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:bky00401] D D1093_01110 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D D1093_05590 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D1093_05595 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1093_01950 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D1093_04840 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D D1093_05600 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:bky00999] D D1093_02435 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D D1093_01370 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:bky00625] D D1093_07110 zinc-binding dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D D1093_04510 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:bky00626] D D1093_07110 zinc-binding dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bky03020] D D1093_05975 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D D1093_05980 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D1093_03730 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D1093_05430 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bky03010] D D1093_01730 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D D1093_06035 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D D1093_03640 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D D1093_06745 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D D1093_03695 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D D1093_05575 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D D1093_03590 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D D1093_03680 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D D1093_03800 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D D1093_03605 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D D1093_03725 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D D1093_03585 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D D1093_03720 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D D1093_03675 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D D1093_02390 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D D1093_01005 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D D1093_03655 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D D1093_05570 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D D1093_03630 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D D1093_01900 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D D1093_01975 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D1093_05960 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D D1093_03625 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D D1093_03610 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D D1093_03615 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D D1093_03670 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D D1093_03685 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D D1093_05970 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D D1093_05560 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D D1093_05965 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D D1093_05955 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D D1093_03805 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D D1093_03660 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D D1093_03705 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D D1093_03645 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D D1093_03735 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D D1093_03690 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D D1093_00905 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D D1093_01780 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D D1093_02015 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D D1093_03635 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D D1093_03620 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D D1093_03665 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D D1093_05215 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D D1093_02020 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D D1093_00955 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D D1093_03650 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D D1093_03700 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D D1093_00415 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D D1093_00535 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D D1093_06880 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D D1093_08265 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D D1093_01785 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D D1093_09335 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D D1093_09060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1093_08445 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1093_09040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1093_08425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1093_09035 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1093_08420 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bky00970] D D1093_01710 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1093_08435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1093_09050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1093_01985 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1093_06175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1093_04175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1093_03525 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1093_06455 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1093_03530 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1093_05025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1093_08665 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1093_03965 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1093_01135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1093_05930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1093_04540 tRNA-His K14226 tRNA-His; tRNA His D D1093_08440 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1093_09055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1093_03180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_05890 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_08300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_06975 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_00075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_06725 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1093_07655 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1093_07985 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_08110 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_08415 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_09030 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_04480 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1093_04165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1093_07130 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1093_08320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_02030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_02010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_06445 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_09410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1093_06935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1093_02710 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1093_05940 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D1093_05925 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1093_06450 tRNA-Val K14237 tRNA-Val; tRNA Val D D1093_07150 tRNA-Val K14237 tRNA-Val; tRNA Val D D1093_06125 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06160 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06820 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D D1093_05900 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D D1093_06825 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D D1093_03755 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1093_04065 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1093_04770 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D1093_04765 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D1093_06995 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D1093_05720 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D1093_05510 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D1093_06700 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D1093_01690 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D D1093_03550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D1093_00620 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1093_02605 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D1093_01465 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D D1093_03995 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1093_06540 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D1093_09010 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D1093_01775 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D1093_01770 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D1093_06595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1093_08975 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bky03060] D D1093_03710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1093_05945 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1093_05760 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1093_07640 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D D1093_05735 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1093_08275 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1093_02330 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D1093_01825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1093_01015 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D1093_02500 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D D1093_01305 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D1093_05705 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D D1093_05710 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D1093_05715 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D D1093_05455 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D1093_01400 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bky04122] D D1093_06605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1093_08060 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D D1093_02525 molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D D1093_05360 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:bky03018] D D1093_02165 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D D1093_06570 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D D1093_05775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1093_02385 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D1093_03195 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1093_06870 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D1093_01355 transcription termination factor Rho K03628 rho; transcription termination factor Rho D D1093_06535 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D D1093_01650 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1093_00030 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1093_07080 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D D1093_04050 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D D1093_05170 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:bky03030] D D1093_01380 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1093_04035 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1093_02495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1093_06705 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1093_01115 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D1093_05650 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D D1093_01910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1093_05555 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D D1093_08005 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D D1093_03060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03295 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03920 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06305 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04905 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D1093_04800 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D D1093_01385 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1093_07815 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bky03410] D D1093_01790 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D D1093_04970 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D D1093_02570 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D D1093_08180 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D D1093_05340 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D1093_05425 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D1093_00700 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D1093_03580 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D1093_01385 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1093_03810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1093_07815 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bky03420] D D1093_06560 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D D1093_03915 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D D1093_05275 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D D1093_05695 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D D1093_07790 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D1093_01385 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1093_07815 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bky03430] D D1093_01815 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D D1093_02670 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D D1093_07790 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D1093_08185 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D D1093_04855 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D D1093_03810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1093_03060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03295 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03920 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06305 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04035 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1093_01910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1093_02495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1093_01115 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D1093_06705 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1093_01380 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1093_05650 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D D1093_07815 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D1093_02890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_03070 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:bky03440] D D1093_03810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1093_03060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03295 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03920 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06305 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_01915 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D D1093_05470 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D D1093_02485 recR; recombination protein RecR K06187 recR; recombination protein RecR D D1093_03750 recA; recombinase RecA K03553 recA; recombination protein RecA D D1093_01385 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1093_00310 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D D1093_00305 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D D1093_00315 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_03265 phage protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_04245 phage protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_06275 putative bacteriophage-related protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_04030 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D D1093_04035 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1093_01910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1093_02495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1093_01115 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D1093_06705 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1093_01380 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1093_05650 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D D1093_00605 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bky02010] D D1093_02260 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D D1093_02265 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D D1093_02270 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D D1093_02275 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D D1093_02535 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1093_02540 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D D1093_02545 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D1093_02550 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D1093_03575 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D D1093_03565 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D D1093_03570 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D D1093_03560 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D D1093_06795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D D1093_06800 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D D1093_06805 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D D1093_06810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D D1093_06815 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D D1093_08555 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D D1093_08565 ABC transporter permease K02072 metI; D-methionine transport system permease protein D D1093_08560 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D D1093_01765 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D D1093_01755 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D D1093_01750 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D D1093_01760 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D D1093_02740 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D D1093_02735 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D D1093_02730 ATP-binding cassette domain-containing protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D D1093_06545 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D D1093_06550 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D D1093_01880 heme ABC transporter permease K02195 ccmC; heme exporter protein C D D1093_01885 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D D1093_01890 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D D1093_05645 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D D1093_05640 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D D1093_01435 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D D1093_00665 ABC transporter permease K09811 ftsX; cell division transport system permease protein D D1093_00660 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D1093_01565 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D D1093_05520 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D D1093_00685 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) [PATH:bky02060] D D1093_01615 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D D1093_01620 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D D1093_02025 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D D1093_01440 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:bky03070] D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein D D1093_05035 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D D1093_07640 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D D1093_05945 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1093_05760 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1093_03710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1093_05735 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1093_08275 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1093_02330 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D1093_01305 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D1093_01825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1093_01015 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D1093_05705 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D D1093_05710 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D1093_05715 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D D1093_00735 TrwN protein K03194 virB1; type IV secretion system protein VirB1 D D1093_08870 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D D1093_00155 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D D1093_00775 TrwM protein K03198 virB3; type IV secretion system protein VirB3 D D1093_08875 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D D1093_00165 type IV secretion protein VblB5 K03200 virB5; type IV secretion system protein VirB5 D D1093_00785 TrwJ1 protein K03200 virB5; type IV secretion system protein VirB5 D D1093_00810 putative TrwJ2 protein K03200 virB5; type IV secretion system protein VirB5 D D1093_00840 putative TrwJ3 K03200 virB5; type IV secretion system protein VirB5 D D1093_00850 putative TrwJ2 protein K03200 virB5; type IV secretion system protein VirB5 D D1093_08895 type IV secretion system protein VirB7 K03202 virB7; type IV secretion system protein VirB7 D D1093_00870 trwF; TrwF protein K03204 virB9; type IV secretion system protein VirB9 D D1093_08905 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D D1093_00790 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00805 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00815 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00830 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00845 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00855 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_08890 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00865 TrwG protein K03203 virB8; type IV secretion system protein VirB8 D D1093_08900 virB8 family protein K03203 virB8; type IV secretion system protein VirB8 D D1093_00875 TrwE protein K03195 virB10; type IV secretion system protein VirB10 D D1093_08910 TrbI/VirB10 family protein K03195 virB10; type IV secretion system protein VirB10 D D1093_00160 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D1093_00780 TrwK protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D1093_08880 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D1093_00880 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D D1093_08915 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D D1093_08930 traG; Ti-type conjugative transfer system protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D1093_09825 conjugal transfer protein TrbG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:bky02020] D D1093_02535 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1093_05255 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D D1093_05260 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D D1093_05120 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_07725 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_07065 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1093_01905 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D1093_01630 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D D1093_01635 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D D1093_03910 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D D1093_03905 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_04625 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_05845 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D D1093_05850 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D D1093_05330 non-motile and phage-resistance protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D D1093_03795 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D D1093_04140 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D D1093_08080 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT D D1093_08075 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D D1093_07145 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D D1093_03560 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D D1093_03565 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D D1093_03570 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D D1093_03575 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D D1093_05180 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D D1093_05185 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D1093_05190 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D D1093_02520 cytochrome c family protein K08738 CYC; cytochrome c D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:bky04148] D D1093_08475 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D D1093_05180 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bky02024] D D1093_07080 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D D1093_06150 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D1093_09855 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D D1093_00150 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D D1093_09860 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D D1093_09865 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD D D1093_09870 transporter K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D D1093_09875 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D D1093_09655 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D D1093_09790 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D D1093_09795 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D D1093_00355 hypothetical protein K20267 trbH; type IV secretion system protein TrbH D D1093_09800 conjugal transfer TrbH family protein K20267 trbH; type IV secretion system protein TrbH D D1093_09805 conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D D1093_06795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D D1093_06800 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D D1093_06805 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D D1093_06810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D D1093_06815 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D D1093_08455 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D D1093_07045 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D D1093_08170 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08175 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08190 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08195 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08165 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D D1093_08160 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1093_08155 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1093_08150 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D D1093_08275 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1093_07640 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D D1093_05945 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1093_05760 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1093_03710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1093_05735 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1093_02330 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D1093_01305 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D1093_01825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1093_01015 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D D1093_08000 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D D1093_05775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bky01501] D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein D D1093_05080 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_06580 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_07895 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bky01502] D D1093_07850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1093_08500 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D D1093_07885 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D D1093_07880 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D D1093_07865 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bky01503] D D1093_06575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D1093_05120 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_07725 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein D D1093_06080 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bky01000] C 01001 Protein kinases [BR:bky01001] D D1093_05255 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D D1093_01630 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D D1093_05845 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D D1093_05330 non-motile and phage-resistance protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D D1093_04140 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bky01009] D D1093_01500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] C 01002 Peptidases and inhibitors [BR:bky01002] D D1093_01400 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D D1093_01040 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D1093_02250 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D1093_05540 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D D1093_04025 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D1093_09610 YopJ family type III secretion system effector serine/threonine acetyltransferase K08598 yopJ; YopJ protease family D D1093_09615 YopJ family type III secretion system effector serine/threonine acetyltransferase K08598 yopJ; YopJ protease family D D1093_05335 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D D1093_02200 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D D1093_02355 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D1093_01585 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D D1093_06765 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D D1093_07810 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D D1093_02565 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D D1093_00240 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D D1093_00995 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D D1093_06060 RIP metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D D1093_05120 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_07725 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_05015 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D D1093_06715 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1093_05865 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D D1093_05875 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D D1093_03115 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D D1093_04430 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D D1093_06730 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D D1093_05455 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D1093_02160 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D D1093_02370 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D D1093_02640 TldD/PmbA family protein K03592 pmbA; PmbA protein D D1093_04880 tldD; metalloprotease TldD K03568 tldD; TldD protein D D1093_07730 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D D1093_07735 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:bky01003] D D1093_05080 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_06580 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_01735 protein ndvB K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bky01005] D D1093_06080 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D D1093_06090 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D D1093_07830 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D D1093_06070 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D D1093_06085 DUF1009 domain-containing protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D D1093_02660 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D D1093_07115 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D D1093_02655 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D D1093_05770 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D D1093_02515 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D D1093_02220 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D D1093_05290 glycosyltransferase family 4 protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bky01011] D D1093_09405 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D1093_07855 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D1093_07860 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D1093_07875 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D1093_07890 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D1093_07850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D D1093_08500 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D D1093_06750 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D D1093_07880 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D D1093_07865 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D D1093_05585 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D D1093_08970 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D D1093_05080 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_06580 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D1093_07895 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D1093_06715 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D1093_05410 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D1093_02210 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D D1093_05610 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D D1093_06720 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D1093_06575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:bky01004] D D1093_05590 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D1093_07010 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D1093_01955 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D D1093_05605 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_07100 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_07105 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D1093_05595 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D1093_01960 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D D1093_06075 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D1093_01950 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D1093_04840 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D1093_00655 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D1093_07015 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D D1093_06850 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D1093_01155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bky01006] D D1093_00540 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D D1093_04780 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D D1093_05745 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D D1093_07720 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D D1093_04825 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D D1093_04890 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:bky01007] D D1093_01465 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D D1093_06125 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06160 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1093_08975 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D D1093_05510 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D1093_03995 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1093_06700 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D1093_02605 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D1093_03550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D1093_00620 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1093_04065 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1093_09010 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D1093_04770 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D1093_04765 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D1093_05720 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D1093_06540 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D1093_06995 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D1093_03755 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1093_01775 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D1093_01770 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D1093_05310 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D D1093_01850 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D1093_03980 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D1093_04485 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D1093_08100 DegT/DnrJ/EryC1/StrS aminotransferase family protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bky00194] D D1093_00570 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D D1093_00575 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D D1093_00580 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D D1093_00585 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D D1093_00590 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D D1093_04755 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D1093_04760 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D1093_04750 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D D1093_04745 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D D1093_04740 ATP synthase subunit K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bky03000] D D1093_06895 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D D1093_02325 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D D1093_08455 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D D1093_01965 transcriptional repressor K09826 irr; Fur family transcriptional regulator, iron response regulator D D1093_05840 rirA; iron-responsive transcriptional regulator RirA K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator D D1093_06530 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D D1093_08745 transcriptional regulator K07724 ner; Ner family transcriptional regulator D D1093_06440 helix-turn-helix transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator D D1093_03380 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D D1093_06325 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D D1093_07305 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D D1093_00930 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D D1093_01330 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1093_08735 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1093_00530 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D D1093_01600 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D D1093_03160 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D D1093_06940 phage related protein K07733 alpA; prophage regulatory protein D D1093_04915 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D D1093_04130 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D1093_07050 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D D1093_03555 sel1 repeat family protein K25885 exoR; exopolysaccharide production negative regulator C 03021 Transcription machinery [BR:bky03021] D D1093_03730 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D1093_05975 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D D1093_05980 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D1093_05430 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D D1093_08000 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D D1093_09085 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D D1093_00515 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D D1093_04500 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D D1093_02420 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D D1093_07030 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D D1093_05950 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D D1093_04130 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D1093_05285 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D D1093_01355 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bky03019] D D1093_06570 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D D1093_05460 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D1093_06535 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D D1093_06870 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D1093_03195 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D1093_05775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1093_02385 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D1093_01355 transcription termination factor Rho K03628 rho; transcription termination factor Rho D D1093_01650 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1093_00030 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1093_07080 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D D1093_04050 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D D1093_05170 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D D1093_02165 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:bky03011] D D1093_01730 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D D1093_06035 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D D1093_03640 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D D1093_06745 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D D1093_03695 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D D1093_05575 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D D1093_03590 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D D1093_03680 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D D1093_03800 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D D1093_03605 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D D1093_03725 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D D1093_03585 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D D1093_03720 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D D1093_03675 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D D1093_02390 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D D1093_01005 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D D1093_03655 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D D1093_05570 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D D1093_03630 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D D1093_01900 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D D1093_01975 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D1093_05960 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D D1093_03625 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D D1093_03610 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D D1093_03615 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D D1093_03670 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D D1093_03685 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D D1093_05560 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D D1093_05965 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D D1093_05955 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D D1093_05970 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D D1093_03805 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D D1093_03660 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D D1093_03705 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D D1093_03645 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D D1093_03735 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D D1093_03690 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D D1093_00905 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D D1093_01780 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D D1093_02015 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D D1093_03635 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D D1093_03620 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D D1093_03665 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D D1093_02020 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D D1093_00955 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D D1093_03650 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D D1093_03700 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D D1093_00415 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D D1093_00535 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D D1093_06880 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D D1093_08265 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D D1093_01785 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D D1093_09335 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D D1093_05215 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D D1093_09035 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1093_08420 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1093_09060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1093_08445 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1093_09040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1093_08425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:bky03009] D D1093_05460 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D1093_05465 GTPase Era K03595 era; GTPase D D1093_02125 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D D1093_04130 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D1093_02420 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D D1093_07030 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D D1093_05950 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D D1093_05620 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D D1093_00990 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D D1093_02245 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D D1093_02380 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D D1093_02625 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D D1093_04660 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D D1093_01340 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D1093_07905 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D D1093_08240 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D D1093_04865 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D D1093_05920 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D D1093_02120 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D D1093_02150 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D D1093_01410 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D D1093_05700 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D D1093_01450 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D D1093_04870 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D D1093_02620 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D D1093_03765 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D D1093_04505 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D D1093_02470 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D D1093_00490 rimJ; 30S ribosomal protein S5 alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D D1093_00915 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D D1093_06735 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D D1093_07805 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D D1093_06570 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D D1093_06830 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D D1093_04735 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D D1093_07075 hflX; GTPase HflX K03665 hflX; GTPase D D1093_04805 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D D1093_05435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D D1093_02405 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D D1093_02425 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D D1093_02145 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D D1093_02455 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D D1093_05200 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:bky03016] D D1093_06125 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06160 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06540 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D1093_02605 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D1093_00620 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1093_06700 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D1093_03995 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1093_04065 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1093_03755 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D1093_06995 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D1093_05720 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D1093_05510 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D1093_03550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D1093_09010 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D1093_01775 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D1093_01770 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D1093_06595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1093_08975 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D D1093_06020 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D1093_02430 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D D1093_01685 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D D1093_02400 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D D1093_06605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1093_04805 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D D1093_07720 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D D1093_01350 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D D1093_01345 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D1093_08270 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D D1093_07910 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D D1093_02580 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D D1093_04060 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D D1093_01610 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D D1093_07935 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D D1093_01465 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D D1093_04770 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D1093_04765 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D1093_02615 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D D1093_06905 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D D1093_02465 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D D1093_01300 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D D1093_06755 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D D1093_05885 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D D1093_00910 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D D1093_05175 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D D1093_01405 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D D1093_08060 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D D1093_06740 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D D1093_07125 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D D1093_05490 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D D1093_03945 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D D1093_00245 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D D1093_02475 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D D1093_01055 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D D1093_01490 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D D1093_06870 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D1093_02385 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bky03012] D D1093_02410 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D D1093_01570 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D D1093_06040 elongation factor Ts K02357 tsf; elongation factor Ts D D1093_03600 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D1093_05935 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D1093_03595 fusA; elongation factor G K02355 fusA; elongation factor G D D1093_02320 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D D1093_06050 ribosome recycling factor K02838 frr; ribosome recycling factor D D1093_02315 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D D1093_05210 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D D1093_09295 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D D1093_00385 efp; elongation factor P K02356 efp; elongation factor P D D1093_06585 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D D1093_01470 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:bky03110] D D1093_06015 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D D1093_09220 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D D1093_05870 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D D1093_02375 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D D1093_01650 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1093_00030 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1093_01655 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D D1093_01860 Hsp33 family molecular chaperone K04083 hslO; molecular chaperone Hsp33 D D1093_01605 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D1093_07135 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D D1093_00035 co-chaperone GroES K04078 groES; chaperonin GroES D D1093_05120 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_07725 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D1093_00240 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D D1093_04745 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D D1093_01825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1093_01645 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D D1093_05750 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D D1093_02335 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D D1093_05630 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D D1093_01485 trxA; thioredoxin K03671 TXN; thioredoxin D D1093_04690 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D D1093_04080 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D D1093_01870 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:bky04131] D D1093_05685 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_00440 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1093_08295 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D D1093_00475 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:bky03032] D D1093_04905 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D1093_05880 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D1093_07005 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D1093_01420 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D1093_01905 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D1093_05555 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D D1093_08005 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D D1093_09675 replication protein C K18996 repC; replication initiation protein RepC D D1093_03060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03295 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03920 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06305 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04035 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1093_01910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1093_05650 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D D1093_01115 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D1093_06705 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1093_01380 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1093_02495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1093_04800 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D D1093_01385 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1093_07815 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D1093_02890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_03070 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_03925 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D D1093_01540 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D D1093_04070 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D1093_03815 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D1093_06865 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bky03036] D D1093_05460 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_00725 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D D1093_05880 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D1093_07005 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D1093_01420 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D1093_01905 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D1093_07080 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D D1093_07840 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D1093_00660 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D1093_07895 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D1093_00715 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D D1093_04515 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D D1093_07900 cell division protein FtsL K03586 ftsL; cell division protein FtsL D D1093_07845 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D D1093_07870 cell division protein FtsW K03588 ftsW; cell division protein FtsW D D1093_00665 ABC transporter permease K09811 ftsX; cell division transport system permease protein D D1093_07835 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D1093_00455 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D D1093_01285 AFG1 family ATPase K06916 zapE; cell division protein ZapE D D1093_06575 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D1093_01335 ParA family protein K03496 parA; chromosome partitioning protein D D1093_08830 AAA family ATPase K03496 parA; chromosome partitioning protein D D1093_09745 ParA family protein K03496 parA; chromosome partitioning protein D D1093_01330 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1093_08735 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1093_04070 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D1093_03815 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D1093_01345 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D1093_01340 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D1093_05885 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D D1093_00925 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D D1093_01185 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D D1093_08260 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D D1093_08925 BID domain-containing T4SS effector K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D D1093_08940 BID domain-containing T4SS effector K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D D1093_00210 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D D1093_08280 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:bky03400] D D1093_05325 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D D1093_04970 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D D1093_01790 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D D1093_02345 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D D1093_00115 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D D1093_05340 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D1093_05425 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D1093_08180 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D D1093_02570 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D D1093_00700 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D1093_03580 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D1093_03810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D D1093_07815 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D1093_01385 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D1093_03915 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D D1093_05275 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D D1093_05695 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D D1093_07790 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D1093_05975 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D D1093_05980 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D1093_03730 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D1093_05430 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D D1093_06560 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D D1093_01815 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D D1093_02670 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D D1093_08185 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D D1093_04855 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D D1093_04035 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D D1093_01910 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D1093_05650 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D D1093_01115 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D1093_06705 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D1093_01380 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D1093_02495 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D1093_03060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03295 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03920 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06305 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_02890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_03070 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_03750 recA; recombinase RecA K03553 recA; recombination protein RecA D D1093_00310 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D D1093_00305 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D D1093_00315 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_03265 phage protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_04245 phage protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_06275 putative bacteriophage-related protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D1093_00605 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D D1093_05550 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D D1093_01915 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D D1093_04030 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D D1093_05470 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D D1093_02485 recR; recombination protein RecR K06187 recR; recombination protein RecR D D1093_07820 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D D1093_01480 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D D1093_01475 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D D1093_03925 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D D1093_01540 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D D1093_06865 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D D1093_05880 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D1093_07005 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D1093_01420 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D1093_00725 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D D1093_03115 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D D1093_04430 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D D1093_06730 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D D1093_02305 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D1093_02310 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:bky03029] D D1093_05185 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D1093_02410 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D D1093_01570 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D D1093_06040 elongation factor Ts K02357 tsf; elongation factor Ts D D1093_03600 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D1093_05935 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D1093_03595 fusA; elongation factor G K02355 fusA; elongation factor G D D1093_00520 ATP-dependent dna helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D D1093_05465 GTPase Era K03595 era; GTPase D D1093_06595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D1093_00620 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D1093_04065 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D1093_03995 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D1093_06820 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D D1093_05900 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D D1093_06825 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D D1093_09470 phage related protein K17680 PEO1; twinkle protein [EC:5.6.2.3] D D1093_03060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03295 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_03920 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_04280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06305 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D1093_06065 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D D1093_01650 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1093_01605 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D1093_00030 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1093_00035 co-chaperone GroES K04078 groES; chaperonin GroES D D1093_01655 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D D1093_06605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D1093_04080 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D D1093_08260 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D D1093_04890 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D1093_07065 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D1093_08275 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1093_00960 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D D1093_07800 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bky02000] D D1093_01565 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D D1093_03760 glucan ABC transporter ATP-binding protein/permease K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3] D D1093_05520 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D D1093_00410 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D D1093_00685 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D D1093_00495 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D D1093_02260 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D D1093_02265 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D D1093_02270 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D D1093_02275 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D D1093_02535 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D D1093_02540 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D D1093_02545 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D1093_02550 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D1093_03575 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D D1093_03565 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D D1093_03570 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D D1093_03560 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D D1093_06795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D D1093_06800 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D D1093_06805 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D D1093_06810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D D1093_06815 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D D1093_08555 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D D1093_08565 ABC transporter permease K02072 metI; D-methionine transport system permease protein D D1093_08560 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D D1093_01130 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D D1093_01125 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D D1093_01120 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D D1093_01545 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D D1093_06110 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D D1093_06115 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D D1093_06100 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D D1093_06105 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D D1093_06095 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D D1093_08170 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08175 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08190 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08195 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D1093_08165 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D D1093_08160 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D D1093_08155 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D D1093_08150 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D D1093_05390 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D D1093_05385 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D D1093_05380 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D D1093_08645 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D D1093_08655 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein D D1093_08650 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein D D1093_08660 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D D1093_01765 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D D1093_01755 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D D1093_01750 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D D1093_01760 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D D1093_02740 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D D1093_02735 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D D1093_02730 ATP-binding cassette domain-containing protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D D1093_02280 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D D1093_02285 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D D1093_02290 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D D1093_05645 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D D1093_05640 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D D1093_01435 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D D1093_06545 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D D1093_06550 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D D1093_01880 heme ABC transporter permease K02195 ccmC; heme exporter protein C D D1093_01885 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D D1093_01890 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D D1093_00665 ABC transporter permease K09811 ftsX; cell division transport system permease protein D D1093_00660 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D1093_03780 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein D D1093_03775 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein D D1093_06615 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D D1093_09735 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D D1093_07750 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D D1093_07755 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D D1093_07760 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D D1093_08040 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D D1093_04075 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D1093_08340 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D1093_09365 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D1093_00060 phosphotransferase K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein D D1093_08400 MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D D1093_03950 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D D1093_01615 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D D1093_02025 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D D1093_01620 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D D1093_01440 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D D1093_08285 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D1093_04525 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D D1093_07630 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel D D1093_08010 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel D D1093_02195 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D D1093_00130 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D D1093_00125 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D D1093_00285 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D D1093_00280 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D D1093_00050 porin family protein K16079 omp31; outer membrane immunogenic protein D D1093_02590 porin family protein K16079 omp31; outer membrane immunogenic protein D D1093_02595 porin family protein K16079 omp31; outer membrane immunogenic protein D D1093_05140 porin family protein K16079 omp31; outer membrane immunogenic protein D D1093_07620 porin family protein K16079 omp31; outer membrane immunogenic protein D D1093_08610 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08620 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08630 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08640 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08635 autotransporter outer membrane beta-barrel domain-containing protein K07279 yfaL; autotransporter family porin D D1093_05400 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein D D1093_00695 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system D D1093_06065 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D D1093_07825 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D D1093_01555 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D D1093_01560 gramicidin S biosynthesis GRST protein K09800 tamB; translocation and assembly module TamB D D1093_02080 surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin D D1093_02085 surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin D D1093_02090 surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin D D1093_02095 surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin D D1093_02105 surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin D D1093_01430 LPS ABC transporter substrate-binding protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D D1093_01425 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D D1093_05635 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D D1093_00615 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D D1093_02450 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein D D1093_07675 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D D1093_07680 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D D1093_03845 amino acid permease K16234 hutT; histidine transporter D D1093_04715 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D D1093_07645 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter D D1093_05295 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D D1093_05855 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D D1093_08015 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D D1093_01235 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D D1093_01230 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D D1093_01225 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D D1093_01220 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D D1093_01215 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D D1093_01210 cation:proton antiporter K05564 phaG; multicomponent K+:H+ antiporter subunit G D D1093_08970 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D D1093_00950 VUT family protein K09125 yhhQ; queuosine precursor transporter D D1093_00110 putative transmembrane iron-regulated protein K22737 mbfA; erythrin-vacuolar iron transport family protein D D1093_07870 cell division protein FtsW K03588 ftsW; cell division protein FtsW D D1093_05405 energy transducer TonB K03832 tonB; periplasmic protein TonB D D1093_00255 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D D1093_00270 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D D1093_04015 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D D1093_08460 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D D1093_05035 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D D1093_00690 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D D1093_05110 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:bky02044] D D1093_05035 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein D D1093_02175 YggT family protein K02221 yggT; YggT family protein D D1093_00735 TrwN protein K03194 virB1; type IV secretion system protein VirB1 D D1093_08870 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D D1093_00155 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D D1093_00775 TrwM protein K03198 virB3; type IV secretion system protein VirB3 D D1093_08875 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D D1093_00160 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D1093_00780 TrwK protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D1093_08880 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D1093_00165 type IV secretion protein VblB5 K03200 virB5; type IV secretion system protein VirB5 D D1093_00785 TrwJ1 protein K03200 virB5; type IV secretion system protein VirB5 D D1093_00810 putative TrwJ2 protein K03200 virB5; type IV secretion system protein VirB5 D D1093_00840 putative TrwJ3 K03200 virB5; type IV secretion system protein VirB5 D D1093_00850 putative TrwJ2 protein K03200 virB5; type IV secretion system protein VirB5 D D1093_00790 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00805 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00815 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00830 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00845 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_00855 TrwI4 protein K03201 virB6; type IV secretion system protein VirB6 D D1093_08890 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D D1093_08895 type IV secretion system protein VirB7 K03202 virB7; type IV secretion system protein VirB7 D D1093_00865 TrwG protein K03203 virB8; type IV secretion system protein VirB8 D D1093_08900 virB8 family protein K03203 virB8; type IV secretion system protein VirB8 D D1093_00870 trwF; TrwF protein K03204 virB9; type IV secretion system protein VirB9 D D1093_08905 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D D1093_00875 TrwE protein K03195 virB10; type IV secretion system protein VirB10 D D1093_08910 TrbI/VirB10 family protein K03195 virB10; type IV secretion system protein VirB10 D D1093_00880 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D D1093_08915 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D D1093_08930 traG; Ti-type conjugative transfer system protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D1093_09825 conjugal transfer protein TrbG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D1093_09855 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D D1093_00150 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D D1093_09860 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D D1093_09865 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD D D1093_09870 transporter K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D D1093_09790 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D D1093_09795 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D D1093_00355 hypothetical protein K20267 trbH; type IV secretion system protein TrbH D D1093_09800 conjugal transfer TrbH family protein K20267 trbH; type IV secretion system protein TrbH D D1093_09805 conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D D1093_09875 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D D1093_09655 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D D1093_08610 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08620 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08630 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08640 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D D1093_08635 autotransporter outer membrane beta-barrel domain-containing protein K07279 yfaL; autotransporter family porin D D1093_02330 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D1093_01825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D1093_07640 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D D1093_05945 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D1093_05760 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D1093_03710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D1093_01015 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D1093_01305 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D1093_05735 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D1093_08275 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D1093_05705 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D D1093_05710 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D1093_05715 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins C 02022 Two-component system [BR:bky02022] D D1093_05255 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D D1093_05260 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D D1093_01630 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D D1093_01635 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D D1093_05090 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D D1093_05125 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D D1093_05845 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D D1093_05850 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D D1093_05330 non-motile and phage-resistance protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D D1093_03795 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D D1093_04140 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D D1093_08075 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D D1093_07145 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR C 02035 Bacterial motility proteins [BR:bky02035] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bky04812] D D1093_07835 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D1093_07840 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D1093_01335 ParA family protein K03496 parA; chromosome partitioning protein D D1093_08830 AAA family ATPase K03496 parA; chromosome partitioning protein D D1093_09745 ParA family protein K03496 parA; chromosome partitioning protein D D1093_01330 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D1093_08735 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bky04147] D D1093_00430 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D1093_05775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D1093_00440 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D1093_00435 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D1093_00475 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D D1093_00030 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D1093_01650 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D1093_02000 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D1093_02240 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D D1093_03600 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D1093_05935 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D1093_06020 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D1093_01500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D D1093_03715 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D1093_01090 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D D1093_03905 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_04625 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D1093_00965 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D1093_01255 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_05815 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D1093_08230 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D D1093_04635 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D1093_05755 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D1093_08295 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bky02048] D D1093_02890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_03070 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D D1093_04960 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D D1093_00090 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D D1093_06320 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D D1093_06315 antitoxin K18842 chpS; antitoxin ChpS D D1093_03385 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D D1093_07300 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D D1093_03380 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D D1093_06325 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D D1093_07305 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D D1093_02775 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D D1093_03015 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D D1093_07160 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D D1093_02770 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D D1093_03010 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D D1093_03045 type II toxin-antitoxin system HicA family toxin K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D D1093_03050 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D D1093_04380 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D D1093_03335 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D D1093_02885 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D D1093_02930 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D D1093_06210 Killer protein K07334 higB-1; toxin HigB-1 D D1093_07445 Killer protein K07334 higB-1; toxin HigB-1 D D1093_00220 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D D1093_02880 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D D1093_02935 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D D1093_06215 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D D1093_07440 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D D1093_07455 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D D1093_07835 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D1093_04070 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D1093_03815 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D1093_06125 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06160 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D1093_06555 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D D1093_06605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:bky01504] D D1093_08040 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D D1093_03540 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:bky00536] D D1093_04315 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin D D1093_07360 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bky03100] D D1093_01710 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1093_08435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1093_09050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D1093_01985 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1093_06175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1093_04175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D1093_03525 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D1093_06455 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D1093_03530 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D1093_05025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1093_08665 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D1093_03965 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D1093_01135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1093_05930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D1093_04540 tRNA-His K14226 tRNA-His; tRNA His D D1093_08440 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1093_09055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D1093_03180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_05890 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_08300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_06975 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_00075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D1093_06725 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1093_07655 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D1093_07985 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_08110 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_08415 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_09030 tRNA-Met K14230 tRNA-Met; tRNA Met D D1093_04480 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D1093_04165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1093_07130 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D1093_08320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_02030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_02010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_06445 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D1093_09410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1093_06935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1093_02710 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D1093_05940 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D1093_05925 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D1093_06450 tRNA-Val K14237 tRNA-Val; tRNA Val D D1093_07150 tRNA-Val K14237 tRNA-Val; tRNA Val D D1093_09060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1093_08445 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D1093_09040 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1093_08425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D1093_09035 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1093_08420 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D1093_02500 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D D1093_07910 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D D1093_07770 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D D1093_08235 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D D1093_06590 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D1093_09000 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D1093_08490 flavodoxin reductase (ferredoxin-nadph reductase) family 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D D1093_08495 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D D1093_03535 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D D1093_05725 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D D1093_02445 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D D1093_05240 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D D1093_01360 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D D1093_05135 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D D1093_00300 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D D1093_06695 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D D1093_02705 phage lysozyme R K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_02800 phage lysozyme R K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_03500 phage lysozyme R K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_06420 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_07185 phage lysozyme R K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_07595 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_09630 phage lysozyme R K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D1093_01165 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D D1093_06005 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D D1093_01695 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D D1093_05165 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D D1093_04110 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D D1093_03935 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] C 99981 Carbohydrate metabolism D D1093_06760 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D D1093_00525 ferredoxin family protein K05524 fdxA; ferredoxin D D1093_08225 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D D1093_06835 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D D1093_02300 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D D1093_01520 sulfate transporter family protein K06203 cysZ; CysZ protein D D1093_00625 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D D1093_07650 UPF0104 family protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D D1093_01045 tetratricopeptide repeat protein K02498 hemY; HemY protein D D1093_01530 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D D1093_05825 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D D1093_05315 cold-shock protein K03704 cspA; cold shock protein D D1093_06790 cold-shock protein K03704 cspA; cold shock protein D D1093_02820 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_02870 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_03025 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_03175 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_03235 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_04215 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_04385 phage antirepressor Ant K07741 antB; anti-repressor protein D D1093_07475 phage antirepressor Ant K07741 antB; anti-repressor protein C 99974 Translation C 99975 Protein processing D D1093_06010 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D D1093_05895 trigger factor K03545 tig; trigger factor D D1093_05420 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D D1093_02295 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D D1093_01550 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D D1093_06770 JAB domain-containing protein K03630 radC; DNA repair protein RadC D D1093_01700 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D D1093_08245 YraN family protein K07460 yraN; putative endonuclease D D1093_06855 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D D1093_03395 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit D D1093_06345 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit D D1093_07290 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit D D1093_09170 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit D D1093_03745 replication-associated recombination protein A K07478 ycaJ; putative ATPase D D1093_09840 DUF1738 domain-containing protein K06919 K06919; putative DNA primase/helicase D D1093_08725 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D D1093_02490 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D D1093_02725 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D D1093_01995 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family C 99978 Cell growth D D1093_01310 septation protein A K06190 ispZ; intracellular septation protein D D1093_02155 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D D1093_02190 typA; translational GTPase TypA K06207 typA; GTP-binding protein D D1093_02460 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D D1093_04655 AsmA family protein K07289 asmA; AsmA protein D D1093_05105 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D D1093_05100 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D D1093_05115 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D D1093_02555 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D D1093_05395 hemin-degrading factor K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D D1093_05545 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D D1093_06610 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D D1093_06620 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D D1093_01105 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D D1093_01830 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D D1093_05005 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D D1093_08480 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D D1093_03830 LemA family protein K03744 lemA; LemA protein D D1093_08990 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D D1093_03825 beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein D D1093_01395 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D D1093_02915 phage baseplate assembly protein GpW K06903 W; Bacteriophage baseplate protein W D D1093_02825 phage tail protein d K06905 D; Bacteriophage probable baseplate hub protein D D1093_06200 phage protein d K06905 D; Bacteriophage probable baseplate hub protein D D1093_07565 phage tail protein D K06905 D; Bacteriophage probable baseplate hub protein D D1093_08120 phage protein D K06905 D; Bacteriophage probable baseplate hub protein D D1093_08675 phage protein D K06905 D; Bacteriophage probable baseplate hub protein D D1093_02835 phage tail protein K06906 gpU; phage tail protein D D1093_06190 phage tail protein K06906 gpU; phage tail protein D D1093_07555 phage tail protein K06906 gpU; phage tail protein D D1093_08130 phage tail protein K06906 gpU; phage tail protein D D1093_08685 phage tail protein K06906 gpU; phage tail protein D D1093_02860 phage tail protein K06907 FI; Bacteriophage tail sheath protein D D1093_08710 phage tail protein K06907 FI; Bacteriophage tail sheath protein D D1093_02855 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D D1093_07535 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D D1093_08705 phage tail protein K06908 FII; Bacteriophage tail tube protein D D1093_04675 cation:dicarboxylase symporter family transporter K06956 K06956; uncharacterized protein D D1093_06600 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D D1093_08215 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D1093_00365 sel1 repeat family protein K07126 K07126; uncharacterized protein D D1093_08530 ATP-dependent protease K07157 K07157; uncharacterized protein D D1093_06990 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D D1093_06785 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D D1093_08030 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D D1093_02180 DUF167 domain-containing protein K09131 K09131; uncharacterized protein D D1093_07995 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D D1093_01100 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D D1093_01745 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D D1093_08535 Trm112 family protein K09791 K09791; uncharacterized protein D D1093_02205 DUF459 domain-containing protein K09795 K09795; uncharacterized protein D D1093_07950 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D D1093_03000 hypothetical protein K09803 K09803; uncharacterized protein D D1093_06300 BrnT family toxin K09803 K09803; uncharacterized protein D D1093_07990 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D D1093_09285 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D D1093_06140 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein D D1093_05445 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D D1093_07775 ClpXP protease specificity-enhancing factor Sspbalpha K09985 K09985; uncharacterized protein D D1093_00260 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D D1093_02415 RNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024