+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Burkholderia mallei ATCC 23344

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BMA0543 ribonuclease III/hypothetical protein, fusion K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D BMA0392 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BMA0544 era; GTP-binding protein Era K03595 era; GTPase C BMA2521 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BMA3255 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor C BMA1062 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA C BMA2147 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C BMA2646 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BMA1964 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D BMA0211 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BMA0146 sun; sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D BMA2239 NOL1/NOP2/sun family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D BMA2472 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BMA2945 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BMA2559 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BMA0525 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BMA2802 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] C 23S rRNA modification factors D BMA1262 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BMA0776 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D BMA1889 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BMA3257 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D BMAA0874 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D BMA2374 THUMP domain protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D BMA1347 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BMA1350 rumA; ribosomal RNA large subunit (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BMA1064 RNA pseudouridylate synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BMA0521 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D BMA1324 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BMA0485 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D BMA1558 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] B ribosomal protein modification factors C BMA1581 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C BMA0402 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C BMA1318 MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C BMA2503 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] C BMA1569 hemK family protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] B rRNA processing factors C BMA0543 ribonuclease III/hypothetical protein, fusion K03685 rnc; ribonuclease III [EC:3.1.26.3] C BMA0520 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C BMA1891 rnG; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C BMA1996 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C BMAA1944 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] B GTPases C BMA0544 era; GTP-binding protein Era K03595 era; GTPase C BMA0394 conserved hypothetical protein TIGR00157 K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C BMA1341 GTPase family protein K03977 engA; GTPase C BMA2521 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-] C BMA1339 hflX; GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C BMA0303 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BMA2094 guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C BMA1060 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BMA1063 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C BMA0503 conserved hypothetical protein K14761 rlbA; ribosome-associated protein C BMA1888 iojap domain protein K09710 ybeB; ribosome-associated protein C BMA0223 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor C BMA0390 conserved hypothetical protein K09889 yjgA; ribosome-associated protein C BMA3109 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C BMAA0519 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C BMA0527 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024