+D GENES KO
#
KEGG Orthology (KO) - Brucella melitensis bv. 1 16M
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bmel00010]
D DK63_2990 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DK63_1855 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DK63_2817 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DK63_700 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D DK63_2816 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DK63_574 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DK63_1123 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DK63_1124 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DK63_2993 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DK63_569 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DK63_1141 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DK63_2052 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DK63_566 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DK63_565 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DK63_3186 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_564 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DK63_1739 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_497 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_2693 iron-containing alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_300 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_1738 acoD; acetaldehyde dehydrogenase 2 K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DK63_2432 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1193 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_306 galm; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_1457 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:bmel00020]
D DK63_584 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DK63_1635 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DK63_632 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DK63_1295 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DK63_1294 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1296 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DK63_1297 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DK63_494 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DK63_1274 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DK63_1273 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DK63_1276 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DK63_1275 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DK63_399 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DK63_2207 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DK63_1298 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DK63_1166 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DK63_1457 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DK63_566 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DK63_565 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DK63_3186 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_564 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bmel00030]
D DK63_1855 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DK63_2730 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DK63_2731 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D DK63_2132 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DK63_298 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DK63_1122 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DK63_1187 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DK63_447 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DK63_2367 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D DK63_3156 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_539 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D DK63_939 prs; ribose-phosphate diphosphokinase family protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DK63_2732 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D DK63_2109 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D DK63_305 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D DK63_1922 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DK63_2816 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DK63_2817 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DK63_700 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:bmel00040]
D DK63_2925 short chain dehydrogenase family protein K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D DK63_2765 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D DK63_2764 glucuronate isomerase family protein K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D DK63_2767 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D DK63_2763 mannitol dehydrogenase Rossmann domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D DK63_2518 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DK63_2096 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DK63_298 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DK63_18 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D DK63_17 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D DK63_874 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D DK63_2883 dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D DK63_1745 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D DK63_2276 FGGY-pentulose kinase family protein K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
D DK63_2275 rbtD; ribitol 2-dehydrogenase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56]
D DK63_3020 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:bmel00051]
D DK63_1656 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DK63_2348 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DK63_2349 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DK63_7 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DK63_8 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DK63_2075 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DK63_2400 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DK63_2399 ger1; GDP-L-fucose synthase 1 K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DK63_3020 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D DK63_1779 bdh2; 3-hydroxybutyrate dehydrogenase type 2 K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D DK63_2817 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DK63_700 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D DK63_17 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D DK63_2816 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DK63_574 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DK63_1461 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DK63_308 HAD hydrolase, IA, variant 1 family protein K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:bmel00052]
D DK63_306 galm; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DK63_501 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DK63_2096 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_2990 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DK63_2884 hypothetical protein K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D DK63_2882 2-keto-3-deoxy-galactonokinase family protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D DK63_2881 dihydroorotate dehydrogenase family protein K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
C 00053 Ascorbate and aldarate metabolism [PATH:bmel00053]
D DK63_2518 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:bmel00500]
D DK63_2096 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DK63_2420 nucleotidyl transferase family protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_2990 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DK63_1855 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DK63_1656 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bmel00520]
D DK63_325 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DK63_2854 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D DK63_2490 badF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D DK63_3066 badF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D DK63_1656 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DK63_2855 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DK63_2556 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DK63_1089 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DK63_2557 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DK63_370 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D DK63_1465 tRNA threonylcarbamoyl adenosine modification protein YjeE K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D DK63_1466 nucleotidyl transferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D DK63_1824 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DK63_845 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DK63_2391 putative N-acetylmannosamine-6-phosphate 2-epimerase domain protein K13967 nanEK; N-acetylmannosamine-6-phosphate 2-epimerase / N-acetylmannosamine kinase [EC:5.1.3.9 2.7.1.60]
D DK63_2514 NAD dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D DK63_2515 galE; UDP-glucose 4-epimerase GalE K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]
D DK63_2990 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_2096 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DK63_2518 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DK63_501 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DK63_1461 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DK63_1855 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DK63_2349 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DK63_7 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DK63_8 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DK63_2348 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DK63_2075 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DK63_2400 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DK63_2074 perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DK63_2399 ger1; GDP-L-fucose synthase 1 K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DK63_2420 nucleotidyl transferase family protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
C 00620 Pyruvate metabolism [PATH:bmel00620]
D DK63_2432 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1193 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_566 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DK63_565 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DK63_3186 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_564 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1739 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_497 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_2693 iron-containing alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_300 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DK63_2368 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DK63_1141 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DK63_1393 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DK63_352 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DK63_351 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DK63_1471 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_1738 acoD; acetaldehyde dehydrogenase 2 K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DK63_494 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DK63_1413 coenzyme A transferase family protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D DK63_2862 nitronate monooxygenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D DK63_827 hypothetical protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D DK63_696 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D DK63_1600 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D DK63_1305 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DK63_926 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DK63_1552 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D DK63_455 dme; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DK63_1684 phosphate acetyl/butaryl transferase family protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DK63_1685 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DK63_1166 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D DK63_1298 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DK63_399 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DK63_2207 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DK63_1457 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DK63_2052 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DK63_1050 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_135 HMGL-like family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DK63_972 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DK63_133 putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DK63_134 putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bmel00630]
D DK63_1014 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D DK63_2432 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1193 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1050 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D DK63_1298 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DK63_584 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DK63_1635 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_271 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DK63_623 pccA; propionyl-CoA carboxylase, alpha subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D DK63_622 pccB; propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D DK63_624 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DK63_2194 FAD binding domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D DK63_2197 4Fe-4S binding domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D DK63_2355 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D DK63_1539 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D DK63_1552 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D DK63_440 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DK63_446 gph; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DK63_1858 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DK63_2692 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_2720 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_442 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_218 aminotransferase class I and II family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DK63_2685 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DK63_2687 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2686 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DK63_1922 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DK63_2109 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D DK63_2852 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DK63_2873 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:bmel00640]
D DK63_2432 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1193 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1126 AMP-binding enzyme family protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D DK63_1413 coenzyme A transferase family protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D DK63_2368 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DK63_2497 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D DK63_2498 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D DK63_3185 hypothetical protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DK63_3048 dehydrogenase E1 component family protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DK63_2499 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2428 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_1393 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DK63_352 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DK63_351 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DK63_1471 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DK63_2868 beta-eliminating lyase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DK63_623 pccA; propionyl-CoA carboxylase, alpha subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D DK63_622 pccB; propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D DK63_271 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DK63_624 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DK63_1297 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DK63_1296 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DK63_1211 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DK63_2989 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:bmel00650]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2236 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_3047 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_1334 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_1411 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2428 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DK63_1274 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DK63_1273 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DK63_1276 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DK63_1275 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DK63_1728 aminotransferase class-III family protein K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D DK63_3057 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_2379 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_1044 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_494 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DK63_1562 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DK63_1566 acetoacetate-CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D DK63_1567 AMP-binding enzyme family protein K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D DK63_1164 3-hydroxybutyrate dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D DK63_2888 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_808 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_807 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:bmel00660]
D DK63_2888 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_808 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_807 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DK63_2182 coA-transferase III family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D DK63_1297 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DK63_1296 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DK63_1278 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DK63_2826 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DK63_2833 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bmel00562]
D DK63_1108 suhB; extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DK63_2679 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DK63_2224 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DK63_2673 idhA; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DK63_2677 xylose isomerase-like TIM barrel family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D DK63_2676 thiamine pyrophosphate enzyme, central domain protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D DK63_2678 kduI/IolB family protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D DK63_2675 pfkB carbohydrate kinase family protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D DK63_1211 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DK63_574 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bmel00190]
D DK63_255 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DK63_256 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DK63_257 nqo5; NADH-quinone oxidoreductase chain 5 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D DK63_258 nuoD; NADH dehydrogenase (quinone), D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D DK63_259 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DK63_260 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DK63_261 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D DK63_262 NADH dehydrogenase family protein K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DK63_263 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DK63_264 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DK63_265 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DK63_266 proton-translocating NADH-quinone oxidoreductase, chain L family protein K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DK63_267 proton-translocating NADH-quinone oxidoreductase, chain M family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DK63_268 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DK63_2460 pyridine nucleotide-disulfide oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DK63_1274 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DK63_1273 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DK63_1276 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DK63_1275 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DK63_950 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D DK63_949 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DK63_948 cytochrome C1 family protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D DK63_2022 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DK63_1591 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D DK63_2025 ctaE; cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D DK63_2021 ctaD; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DK63_2020 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DK63_2024 cytochrome c oxidase assembly CtaG/Cox11 family protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D DK63_239 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DK63_1929 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D DK63_1928 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D DK63_1927 cbb3-type cytochrome oxidase component FixQ family protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D DK63_1926 ccoP; cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D DK63_1590 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D DK63_1589 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D DK63_1588 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D DK63_2486 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DK63_2487 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DK63_2488 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DK63_1586 cytochrome c family protein K08738 CYC; cytochrome c
D DK63_2189 cycA; cytochrome c2 K08738 CYC; cytochrome c
D DK63_1183 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DK63_1181 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DK63_1182 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DK63_1184 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DK63_1180 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DK63_1947 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DK63_1949 plant ATP synthase F0 family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DK63_1950 ATP synthase B/B' CF family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DK63_1948 ATP synthase subunit C family protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DK63_1358 ppa; inorganic pyrophosphatase:Bacterial/Archaeal inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DK63_205 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DK63_1866 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bmel00680]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DK63_1666 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D DK63_218 aminotransferase class I and II family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DK63_1922 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DK63_569 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DK63_1298 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DK63_2816 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DK63_2817 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DK63_700 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D DK63_2368 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DK63_2432 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1193 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_2993 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DK63_1085 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_2435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_1086 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DK63_810 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:bmel00910]
D DK63_2307 narK; nitrite transporter family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DK63_2306 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2305 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2303 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2268 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D DK63_2258 norB; nitric oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D DK63_2257 norC; nitric oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C
D DK63_2282 nosZ; nitrous-oxide reductase, TAT-dependent K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D DK63_2781 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DK63_1200 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DK63_1763 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DK63_2692 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_2720 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_442 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_3203 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DK63_2080 pyridine nucleotide-disulfide oxidoreductase family protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DK63_2741 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D DK63_1208 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bmel00920]
D DK63_756 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DK63_1648 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DK63_1649 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DK63_755 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DK63_1650 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DK63_754 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DK63_1651 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DK63_3136 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DK63_2293 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DK63_3138 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DK63_2294 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DK63_3137 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DK63_2295 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DK63_1730 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DK63_1729 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DK63_1731 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DK63_1720 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D DK63_2245 flavodoxin family protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D DK63_1719 nitrite and sulphite reductase 4Fe-4S domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D DK63_491 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DK63_692 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DK63_489 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DK63_1333 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DK63_2466 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D DK63_1874 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D DK63_1970 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D DK63_2748 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bmel00061]
D DK63_1393 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DK63_352 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DK63_351 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DK63_1471 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DK63_2013 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DK63_2011 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DK63_2468 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DK63_229 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DK63_1533 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DK63_2014 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_301 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_302 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_3183 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2729 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2376 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2012 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2959 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_1534 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D DK63_588 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DK63_1977 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_1532 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_1860 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bmel00071]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2428 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DK63_2750 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DK63_524 hypothetical protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DK63_1860 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DK63_2689 thcD; rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DK63_1739 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_497 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_2693 iron-containing alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_300 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:bmel00121]
D DK63_882 linear amide C-N hydrolase, choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D DK63_1020 short chain dehydrogenase family protein K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
D DK63_1019 hdhA; 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bmel00561]
D DK63_1922 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_1027 sigma-70, region 4 family protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D DK63_1029 dak1 domain protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D DK63_1026 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D DK63_1028 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D DK63_228 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DK63_2575 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DK63_1359 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DK63_451 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:bmel00564]
D DK63_1262 ketopantoate reductase PanE/ApbA family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DK63_1736 FAD binding domain protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DK63_2575 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DK63_1359 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DK63_451 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DK63_3199 alpha/beta hydrolase fold family protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D DK63_1491 methyltransferase small domain protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D DK63_592 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DK63_2546 pcs; phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D DK63_2000 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DK63_1999 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DK63_153 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DK63_3003 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:bmel01040]
D DK63_1628 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DK63_1270 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D DK63_920 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bmel00230]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_939 prs; ribose-phosphate diphosphokinase family protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DK63_2002 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DK63_1972 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DK63_164 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DK63_287 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D DK63_291 purS; phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D DK63_290 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DK63_165 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DK63_1138 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DK63_1137 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DK63_292 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DK63_297 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DK63_1198 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DK63_946 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DK63_332 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DK63_936 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DK63_1350 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DK63_2352 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DK63_149 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DK63_1713 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DK63_482 phosphoribosyl transferase domain protein K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D DK63_1915 xdhA; xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D DK63_1916 xdhB; xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D DK63_2362 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DK63_1920 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D DK63_2017 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DK63_480 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DK63_2322 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DK63_2323 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DK63_322 dgt; dGTPase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D DK63_122 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D DK63_109 rsh; GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DK63_2648 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DK63_206 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DK63_1083 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DK63_85 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D DK63_2619 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D DK63_1118 ymdB-like family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DK63_644 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DK63_180 AAA domain protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DK63_502 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DK63_1730 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DK63_1729 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DK63_2059 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D DK63_1913 uraD; OHCU decarboxylase K16842 hpxB; allantoinase [EC:3.5.2.5]
D DK63_1912 cupin domain protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D DK63_2058 ureidoglycolate hydrolase family protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D DK63_1838 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DK63_780 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DK63_1837 ureB1; urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DK63_779 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DK63_1835 ureA1; urease subunit gamma 1 K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DK63_778 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:bmel00240]
D DK63_902 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DK63_898 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DK63_2573 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DK63_124 pyrC; dihydroorotase, multifunctional complex type domain protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DK63_2574 pyrC; dihydroorotase, multifunctional complex type domain protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DK63_1880 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D DK63_110 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DK63_1492 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DK63_595 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DK63_149 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DK63_502 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DK63_1435 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DK63_1818 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DK63_571 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DK63_1573 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DK63_332 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DK63_3010 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DK63_1118 ymdB-like family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DK63_1875 2'-deoxycytidine 5'-triphosphate deaminase family protein K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D DK63_480 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DK63_2322 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DK63_2323 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DK63_122 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D DK63_432 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DK63_1076 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DK63_817 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DK63_1853 FAD dependent oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D DK63_1852 dihydroorotate dehydrogenase family domain protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D DK63_1847 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D DK63_1848 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bmel00250]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_1327 asparaginase family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DK63_1329 asparaginase family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DK63_1325 fumarase C family protein K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D DK63_1618 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DK63_1346 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DK63_1083 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DK63_297 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DK63_2573 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DK63_1728 aminotransferase class-III family protein K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D DK63_3057 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_2379 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_1044 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_3203 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DK63_2080 pyridine nucleotide-disulfide oxidoreductase family protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DK63_1200 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DK63_1763 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DK63_2683 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DK63_2692 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_2720 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_442 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_902 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DK63_898 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DK63_2342 glsA1; glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2]
D DK63_290 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DK63_2855 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DK63_2556 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DK63_2002 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bmel00260]
D DK63_1247 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DK63_2830 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DK63_701 ACT domain protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DK63_2029 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D DK63_2037 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DK63_3202 psald; phenylserine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DK63_218 aminotransferase class I and II family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DK63_1552 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D DK63_1922 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DK63_2993 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DK63_1085 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_2435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_1086 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DK63_810 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DK63_1887 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D DK63_2685 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DK63_2687 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2686 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DK63_2000 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DK63_22 FAD dependent oxidoreductase family protein K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D DK63_21 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D DK63_876 putative Ring hydroxylating alpha subunit K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D DK63_877 2Fe-2S iron-sulfur cluster binding domain protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D DK63_1766 sarcosine oxidase, alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D DK63_1764 sarcosine oxidase, beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D DK63_1768 sarcosine oxidase, gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D DK63_1765 soxD; subunit delta of sarcosine oxidase K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D DK63_609 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DK63_487 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DK63_1472 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DK63_1474 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bmel00270]
D DK63_692 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DK63_489 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DK63_1333 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DK63_196 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DK63_1726 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DK63_1520 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DK63_2361 phosphorylase superfamily protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DK63_936 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DK63_1331 cys/Met metabolism PLP-dependent enzyme family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D DK63_1463 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DK63_1247 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DK63_2830 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DK63_701 ACT domain protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DK63_2466 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D DK63_245 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DK63_1874 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D DK63_2716 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DK63_1495 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_491 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DK63_1298 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DK63_609 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DK63_1085 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_2435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_1086 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bmel00280]
D DK63_2497 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D DK63_2498 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D DK63_3185 hypothetical protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DK63_3048 dehydrogenase E1 component family protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DK63_2499 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2428 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DK63_2750 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DK63_1565 hypothetical protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_623 pccA; propionyl-CoA carboxylase, alpha subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D DK63_622 pccB; propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D DK63_271 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DK63_624 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DK63_740 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DK63_391 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DK63_1211 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2868 beta-eliminating lyase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DK63_1563 D-ala D-ala ligase family protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D DK63_1564 carboxyl transferase domain protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D DK63_1560 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D DK63_1562 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DK63_1566 acetoacetate-CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D DK63_1567 AMP-binding enzyme family protein K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bmel00290]
D DK63_487 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DK63_1278 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DK63_2826 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DK63_2833 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DK63_2888 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_808 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_807 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DK63_801 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DK63_1641 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DK63_135 HMGL-like family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DK63_972 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DK63_133 putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DK63_134 putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bmel00300]
D DK63_701 ACT domain protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DK63_1247 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DK63_2830 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DK63_2386 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DK63_104 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DK63_2992 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DK63_2972 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DK63_1870 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DK63_2974 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DK63_1301 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DK63_1348 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DK63_852 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DK63_851 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bmel00310]
D DK63_2851 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D DK63_1294 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_524 hypothetical protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_3057 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_2379 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_1044 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_2951 FAD binding domain protein K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D DK63_523 coA-transferase III family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D DK63_2238 coA-transferase III family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D DK63_2876 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DK63_2251 malate/L-lactate dehydrogenase family protein K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D DK63_2848 FAD binding domain protein K26065 amaA; L-pipecolate oxidase
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bmel00220]
D DK63_1871 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DK63_1618 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DK63_1346 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DK63_2842 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D DK63_1838 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DK63_780 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DK63_1837 ureB1; urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DK63_779 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DK63_1835 ureA1; urease subunit gamma 1 K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DK63_778 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DK63_2342 glsA1; glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2]
D DK63_290 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DK63_2692 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_2720 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_442 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_902 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DK63_898 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DK63_1200 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DK63_1763 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_1310 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DK63_2969 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DK63_240 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DK63_1870 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:bmel00330]
D DK63_2931 creatinine amidohydrolase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D DK63_241 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D DK63_1324 arginase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D DK63_2122 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D DK63_1901 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2121 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_3028 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_2722 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D DK63_3120 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D DK63_2842 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D DK63_2799 aminotransferase class-III family protein K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D DK63_2734 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DK63_2683 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DK63_2841 ornithine cyclodeaminase/mu-crystallin family protein K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D DK63_1223 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DK63_1222 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DK63_1883 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_2876 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DK63_1903 hypothetical protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]
C 00340 Histidine metabolism [PATH:bmel00340]
D DK63_2204 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DK63_2203 tRNA synthetase class II core domain family protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D DK63_1453 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D DK63_513 phosphoribosyl-AMP cyclohydrolase family protein K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D DK63_1451 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DK63_1450 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DK63_1452 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DK63_1448 imidazoleglycerol-phosphate dehydratase family protein K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DK63_1352 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_95 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_96 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_3198 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D DK63_1822 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D DK63_2874 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D DK63_2871 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D DK63_2870 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D DK63_2873 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:bmel00350]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_1352 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_95 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_96 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DK63_1739 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_497 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_2693 iron-containing alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_300 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_3110 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D DK63_3111 5-carboxymethyl-2-hydroxymuconate isomerase family protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D DK63_3107 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D DK63_294 hpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D DK63_3106 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D DK63_3057 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_2379 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_1044 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_1606 fumarylacetoacetate (FAA) hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:bmel00360]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2236 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_3047 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_1334 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_1352 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_95 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_96 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_2866 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D DK63_2876 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DK63_2121 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_3028 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_2689 thcD; rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:bmel00380]
D DK63_1294 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_524 hypothetical protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2121 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_3028 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_2355 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bmel00400]
D DK63_450 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DK63_1389 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DK63_353 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DK63_1436 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D DK63_1390 shikimate kinase family protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DK63_1572 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DK63_1984 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DK63_974 anthranilate synthase K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D DK63_576 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DK63_1475 N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DK63_577 indole-3-glycerol phosphate synthase family protein K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DK63_1472 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DK63_1474 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DK63_1205 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D DK63_1354 prephenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D DK63_1583 prephenate dehydratase family protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_1352 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_95 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_96 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bmel00410]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_1897 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DK63_1853 FAD dependent oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D DK63_1852 dihydroorotate dehydrogenase family domain protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D DK63_1847 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D DK63_1848 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DK63_2868 beta-eliminating lyase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_2428 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D DK63_1211 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bmel00430]
D DK63_1200 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D DK63_2368 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:bmel00440]
D DK63_309 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D DK63_436 metallo-beta-lactamase superfamily protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:bmel00450]
D DK63_196 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DK63_1726 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DK63_1331 cys/Met metabolism PLP-dependent enzyme family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D DK63_376 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DK63_911 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DK63_1730 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DK63_1729 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DK63_434 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bmel00460]
D DK63_1327 asparaginase family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DK63_1329 asparaginase family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DK63_218 aminotransferase class I and II family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bmel00470]
D DK63_2865 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DK63_2876 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DK63_844 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_699 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_2342 glsA1; glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2]
D DK63_290 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DK63_628 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DK63_849 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DK63_456 hypothetical protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D DK63_1301 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DK63_1348 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DK63_1176 prpA; 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D DK63_2250 dapA; dihydrodipicolinate synthase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D DK63_2866 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:bmel00480]
D DK63_1355 chaC-like family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D DK63_2644 hydantoinase/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D DK63_2716 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DK63_1495 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DK63_1543 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DK63_144 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DK63_79 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DK63_906 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_157 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_392 glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_2947 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_2985 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_449 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D DK63_632 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DK63_2132 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DK63_2730 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DK63_2031 ahpC/TSA family protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D DK63_2122 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bmel00540]
D DK63_587 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DK63_840 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DK63_589 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DK63_586 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DK63_585 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DK63_2228 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DK63_2098 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DK63_570 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DK63_1585 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DK63_2227 3-Deoxy-D-manno-octulosonic-acid transferase family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DK63_299 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DK63_1314 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
C 00542 O-Antigen repeat unit biosynthesis [PATH:bmel00542]
D DK63_2409 glycosyl transferase 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bmel00541]
D DK63_2096 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DK63_501 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DK63_2518 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DK63_2800 3-beta hydroxysteroid dehydrogenase/isomerase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DK63_2417 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DK63_2420 nucleotidyl transferase family protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DK63_2348 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DK63_2349 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DK63_7 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DK63_8 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DK63_2075 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DK63_2400 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DK63_2399 ger1; GDP-L-fucose synthase 1 K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DK63_2074 perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DK63_2070 formyl transferase family protein K00607 wbkC; GDP-perosamine N-formyltransferase [EC:2.1.2.14]
D DK63_2557 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:bmel00550]
D DK63_1824 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DK63_845 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DK63_846 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DK63_849 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DK63_852 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DK63_844 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_699 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_851 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DK63_593 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DK63_2984 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DK63_850 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DK63_847 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DK63_1161 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DK63_1658 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_360 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_52 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_853 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DK63_431 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bmel00552]
D DK63_2984 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DK63_2409 glycosyl transferase 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bmel00543]
D DK63_2405 bacterial transferase hexapeptide family protein K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D DK63_2409 glycosyl transferase 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DK63_692 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bmel00730]
D DK63_1754 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DK63_372 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DK63_1753 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D DK63_1992 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DK63_1751 thiazole biosynthesis ThiG family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DK63_1750 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DK63_1105 thiamine monophosphate synthase/TENI family protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DK63_633 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DK63_1147 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D DK63_644 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DK63_180 AAA domain protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DK63_1748 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:bmel00740]
D DK63_1985 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DK63_220 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DK63_2656 ribH2; 6,7-dimethyl-8-ribityllumazine synthase 2 K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DK63_222 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DK63_221 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DK63_2212 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DK63_2996 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D DK63_2300 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bmel00750]
D DK63_1974 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D DK63_1209 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D DK63_1086 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DK63_139 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D DK63_804 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D DK63_2037 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bmel00760]
D DK63_1653 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DK63_332 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DK63_1221 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DK63_502 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DK63_1584 NUDIX domain protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D DK63_452 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DK63_559 cinA; competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D DK63_880 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D DK63_380 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DK63_2917 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DK63_2918 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DK63_2916 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D DK63_3057 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_2379 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DK63_1044 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bmel00770]
D DK63_2888 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_808 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DK63_807 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DK63_801 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DK63_1641 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DK63_1898 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DK63_1897 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DK63_1454 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D DK63_3005 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DK63_502 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DK63_535 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DK63_1437 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DK63_116 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DK63_1853 FAD dependent oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D DK63_1852 dihydroorotate dehydrogenase family domain protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D DK63_1847 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D DK63_1848 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bmel00780]
D DK63_1533 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DK63_2014 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_301 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_302 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_3183 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2729 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2376 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2012 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2959 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_588 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DK63_1977 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_1532 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_2471 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DK63_2469 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DK63_2470 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DK63_2472 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DK63_269 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bmel00785]
D DK63_2564 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DK63_562 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_566 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DK63_565 hypothetical protein K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DK63_3186 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_564 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DK63_1295 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DK63_1294 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DK63_2497 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D DK63_2498 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D DK63_3185 hypothetical protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DK63_3048 dehydrogenase E1 component family protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DK63_2499 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DK63_2685 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DK63_2687 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DK63_2686 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bmel00790]
D DK63_512 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DK63_633 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DK63_467 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DK63_468 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DK63_466 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DK63_816 dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DK63_1470 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DK63_1985 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DK63_2105 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D DK63_2104 aminotransferase class IV family protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D DK63_1338 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DK63_1625 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DK63_1339 queE; 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DK63_1337 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DK63_618 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DK63_396 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DK63_578 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DK63_151 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DK63_2474 mog; molybdenum cofactor biosynthesis MOG K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DK63_579 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DK63_395 mobA-like NTP transferase domain protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bmel00670]
D DK63_816 dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DK63_2733 tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DK63_218 aminotransferase class I and II family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DK63_164 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DK63_1198 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DK63_2977 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DK63_2687 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DK63_1726 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DK63_817 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DK63_2852 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DK63_865 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DK63_1119 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bmel00860]
D DK63_1887 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D DK63_583 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_454 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_3023 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DK63_2414 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DK63_213 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DK63_1260 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DK63_1259 uroporphyrinogen-III synthase HemD family protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D DK63_1433 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DK63_956 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D DK63_3149 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DK63_112 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DK63_1432 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D DK63_2101 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DK63_1717 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D DK63_723 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D DK63_2022 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DK63_239 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DK63_714 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D DK63_712 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D DK63_728 cobalamin synthesis G family protein K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D DK63_715 cobJ; precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D DK63_726 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D DK63_727 precorrin-6x reductase CbiJ/CobK family protein K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D DK63_725 cbiD family protein K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D DK63_711 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D DK63_713 precorrin-8X methylmutase family protein K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D DK63_722 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DK63_733 cobN; cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D DK63_1385 cobS; cobaltochelatase, CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D DK63_1384 cobT; cobaltochelatase, CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D DK63_718 flavin reductase like domain protein K13786 cobR; cob(II)yrinic acid a,c-diamide reductase [EC:1.16.8.-]
D DK63_1340 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DK63_732 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DK63_738 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DK63_719 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DK63_721 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D DK63_735 cobP; bifunctional adenosylcobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DK63_313 cobS; cobaltochelatase, CobS subunit K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DK63_314 cobT; cobaltochelatase, CobT subunit K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DK63_2538 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bmel00130]
D DK63_1973 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DK63_2299 ubiD; ubiD decarboxylase family protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D DK63_2300 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DK63_1248 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D DK63_1271 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D DK63_2547 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D DK63_3008 ubiquinone/menaquinone biosynthesis methyltransferase family protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DK63_3168 entC; isochorismate synthase entC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D DK63_485 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bmel00900]
D DK63_1992 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DK63_558 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D DK63_1955 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DK63_1163 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DK63_2028 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2300 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DK63_1162 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D DK63_1960 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DK63_593 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:bmel00906]
D DK63_339 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:bmel00907]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_1562 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DK63_1122 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bmel00523]
D DK63_2800 3-beta hydroxysteroid dehydrogenase/isomerase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DK63_2417 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:bmel01053]
D DK63_3168 entC; isochorismate synthase entC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D DK63_3166 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D DK63_3165 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D DK63_3163 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D DK63_3167 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D DK63_3169 condensation domain protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01055 Biosynthesis of vancomycin group antibiotics
D DK63_2800 3-beta hydroxysteroid dehydrogenase/isomerase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D DK63_3044 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:bmel00332]
D DK63_1223 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DK63_1222 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bmel00261]
D DK63_1730 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DK63_1729 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DK63_1247 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DK63_2830 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DK63_2386 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DK63_104 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DK63_2992 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bmel00521]
D DK63_2990 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DK63_1602 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DK63_1108 suhB; extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DK63_2679 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DK63_2224 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DK63_2673 idhA; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DK63_2800 3-beta hydroxysteroid dehydrogenase/isomerase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DK63_2417 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DK63_2990 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D DK63_2800 3-beta hydroxysteroid dehydrogenase/isomerase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bmel00401]
D DK63_1354 prephenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_1352 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_95 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_96 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DK63_796 phenazine biosynthesis, PhzF family protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
C 00333 Prodigiosin biosynthesis
D DK63_2011 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DK63_3183 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2729 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2376 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2012 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2959 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_1977 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_1532 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DK63_2013 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bmel00999]
D DK63_1520 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DK63_1436 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bmel00362]
D DK63_2609 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D DK63_2604 3-oxoacid CoA-transferase, A subunit K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D DK63_2602 3-oxoacid CoA-transferase, B subunit K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D DK63_296 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D DK63_2612 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D DK63_2611 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D DK63_2613 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D DK63_2610 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DK63_2607 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DK63_524 hypothetical protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2236 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_3047 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_1334 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:bmel00627]
D DK63_2121 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_3028 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_2300 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bmel00625]
D DK63_1739 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_497 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_2693 iron-containing alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_300 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DK63_3000 acyl-CoA reductase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2638 aldA; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_2960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DK63_34 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DK63_2044 HAD hydrolase, IA, variant 3 family protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:bmel00361]
D DK63_296 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D DK63_34 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DK63_2044 HAD hydrolase, IA, variant 3 family protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:bmel00622]
D DK63_296 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation [PATH:bmel00633]
D DK63_2844 flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:bmel00643]
D DK63_2121 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_3028 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DK63_296 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D DK63_1413 coenzyme A transferase family protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D DK63_1838 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DK63_780 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DK63_1837 ureB1; urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DK63_779 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DK63_1835 ureA1; urease subunit gamma 1 K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DK63_778 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:bmel00930]
D DK63_3045 hypothetical protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D DK63_2233 hypothetical protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D DK63_1546 putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_3046 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2235 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DK63_2746 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:bmel00626]
D DK63_1739 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_497 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DK63_2693 iron-containing alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_300 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DK63_1669 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D DK63_2612 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D DK63_2611 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bmel03020]
D DK63_673 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DK63_672 DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DK63_641 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DK63_108 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bmel03010]
D DK63_1574 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DK63_597 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DK63_659 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DK63_280 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DK63_648 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DK63_2010 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DK63_669 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DK63_651 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D DK63_242 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D DK63_666 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DK63_642 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DK63_670 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DK63_643 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DK63_652 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D DK63_1528 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DK63_1204 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DK63_656 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DK63_2009 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DK63_661 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DK63_1547 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DK63_2909 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DK63_676 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DK63_662 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DK63_665 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DK63_664 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DK63_653 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D DK63_650 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DK63_674 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DK63_2007 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DK63_675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DK63_677 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DK63_243 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DK63_655 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DK63_646 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DK63_658 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DK63_640 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DK63_649 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DK63_1279 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DK63_1484 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DK63_1229 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DK63_660 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DK63_663 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DK63_654 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DK63_941 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D DK63_1228 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DK63_1378 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DK63_657 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DK63_647 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DK63_1112 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DK63_1160 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DK63_2584 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DK63_1483 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DK63_1139 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DK63_1042 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_3065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_1239 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_1039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_1236 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_3062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_1038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_3061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_1235 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bmel00970]
D DK63_1040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_3063 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_1237 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_1570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_1356 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_177 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_1842 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_403 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_1401 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_2598 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DK63_2328 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DK63_253 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DK63_2591 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DK63_2064 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DK63_1018 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DK63_1055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DK63_705 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DK63_682 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_2838 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_2963 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_1005 tRNA-His K14226 tRNA-His; tRNA His
D DK63_1041 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DK63_3064 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DK63_1238 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DK63_344 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_486 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_1316 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_2994 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_515 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_760 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DK63_2561 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DK63_889 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1003 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1037 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1234 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_3060 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1816 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DK63_175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DK63_233 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DK63_1732 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DK63_99 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_1230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_2533 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_3014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_1826 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DK63_379 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DK63_2782 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DK63_680 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DK63_683 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DK63_3195 tRNA-Val K14237 tRNA-Val; tRNA Val
D DK63_252 tRNA-Val K14237 tRNA-Val; tRNA Val
D DK63_402 tRNA-Val K14237 tRNA-Val; tRNA Val
D DK63_583 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_454 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_43 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DK63_2953 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DK63_2568 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DK63_346 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DK63_2569 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DK63_634 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DK63_208 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DK63_1962 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DK63_1963 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DK63_507 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DK63_331 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DK63_132 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DK63_434 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DK63_2977 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DK63_388 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DK63_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DK63_2213 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DK63_2743 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D DK63_323 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DK63_273 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DK63_2202 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DK63_1486 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DK63_1487 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DK63_368 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DK63_1681 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bmel03060]
D DK63_645 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DK63_679 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DK63_573 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DK63_337 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_750 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_336 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DK63_2967 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DK63_1312 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DK63_1439 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DK63_1206 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DK63_1303 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DK63_328 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D DK63_329 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D DK63_330 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DK63_117 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DK63_1688 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bmel04122]
D DK63_372 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DK63_491 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DK63_1395 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DK63_992 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DK63_151 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DK63_396 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DK63_152 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D DK63_1551 thiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D DK63_578 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DK63_2474 mog; molybdenum cofactor biosynthesis MOG K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DK63_1752 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:bmel03018]
D DK63_1215 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DK63_358 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DK63_569 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DK63_1529 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DK63_488 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DK63_2579 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DK63_1664 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DK63_1430 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DK63_270 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DK63_1489 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DK63_2209 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DK63_550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DK63_205 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DK63_1866 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DK63_960 poly A polymerase head domain protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bmel03030]
D DK63_1438 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2952 exonuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2597 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_276 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DK63_1581 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DK63_433 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DK63_1421 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DK63_145 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DK63_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DK63_2005 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DK63_895 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DK63_541 ssb4; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DK63_2030 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DK63_1951 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DK63_1663 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DK63_837 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bmel03410]
D DK63_1704 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DK63_2045 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DK63_1545 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DK63_1048 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DK63_2200 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DK63_106 uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DK63_82 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DK63_319 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DK63_1366 exodeoxyribonuclease III family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DK63_1663 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DK63_698 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DK63_837 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bmel03420]
D DK63_2553 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DK63_544 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DK63_922 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DK63_154 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DK63_830 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DK63_1663 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DK63_837 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bmel03430]
D DK63_1686 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DK63_2230 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D DK63_830 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DK63_2717 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DK63_1987 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DK63_698 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DK63_541 ssb4; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DK63_276 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DK63_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DK63_1581 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DK63_1421 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DK63_433 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DK63_1438 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2952 exonuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2597 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_145 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DK63_837 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bmel03440]
D DK63_698 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DK63_541 ssb4; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DK63_1550 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D DK63_121 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DK63_1579 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DK63_635 recA; protein RecA K03553 recA; recombination protein RecA
D DK63_1663 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DK63_1101 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DK63_1100 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DK63_1102 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DK63_2555 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DK63_276 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DK63_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DK63_1581 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DK63_1421 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DK63_433 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DK63_1438 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2952 exonuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2597 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_145 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DK63_1186 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bmel02010]
D DK63_756 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DK63_1648 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DK63_1649 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DK63_755 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DK63_1650 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DK63_754 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DK63_1651 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DK63_3136 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DK63_2293 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DK63_3138 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DK63_2294 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DK63_3137 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DK63_2295 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DK63_1749 NMT1-like family protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D DK63_1747 binding--dependent transport system inner membrane component family protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D DK63_2112 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DK63_2113 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D DK63_2114 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DK63_2661 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DK63_2682 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DK63_2660 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DK63_2681 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DK63_2662 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DK63_2680 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DK63_1148 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D DK63_1149 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D DK63_1150 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D DK63_1011 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D DK63_1008 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D DK63_1009 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D DK63_1010 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DK63_3027 bacterial extracellular solute-binding family protein K11077 attC; mannopine transport system substrate-binding protein
D DK63_3026 binding--dependent transport system inner membrane component family protein K11078 attB; mannopine transport system permease protein
D DK63_3025 binding--dependent transport system inner membrane component family protein K11079 attA2; mannopine transport system permease protein
D DK63_3024 ABC transporter family protein K11080 attA1; mannopine transport system ATP-binding protein
D DK63_2696 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DK63_981 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DK63_2697 binding--dependent transport system inner membrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D DK63_982 choW; choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D DK63_2698 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DK63_983 choV; choline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DK63_1761 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D DK63_1758 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D DK63_1760 putative osmoprotectant uptake system permease protein yehY K05846 opuBD; osmoprotectant transport system permease protein
D DK63_1759 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D DK63_2314 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2496 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_3133 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2652 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2702 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_1774 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2492 bacterial extracellular solute-binding family protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D DK63_2493 binding--dependent transport system inner membrane component family protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D DK63_2494 binding--dependent transport system inner membrane component family protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D DK63_2310 bacterial extracellular solute-binding family protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D DK63_2311 binding--dependent transport system inner membrane component family protein K10237 thuF; trehalose/maltose transport system permease protein
D DK63_2312 binding--dependent transport system inner membrane component family protein K10238 thuG; trehalose/maltose transport system permease protein
D DK63_2879 sbpA; multiple sugar-binding periplasmic protein sbpA K10546 chvE; putative multiple sugar transport system substrate-binding protein
D DK63_2877 branched-chain amino acid transport system / permease component family protein K10547 gguB; putative multiple sugar transport system permease protein
D DK63_2878 ABC transporter family protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_459 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DK63_457 STAS domain protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DK63_458 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DK63_3162 basic membrane family protein K07335 bmpA; basic membrane protein A and related proteins
D DK63_2540 basic membrane family protein K07335 bmpA; basic membrane protein A and related proteins
D DK63_3161 basic membrane family protein K07335 bmpA; basic membrane protein A and related proteins
D DK63_3159 branched-chain amino acid transport system / permease component family protein K23535 nupB; general nucleoside transport system permease protein
D DK63_2542 branched-chain amino acid transport system / permease component family protein K23535 nupB; general nucleoside transport system permease protein
D DK63_3158 branched-chain amino acid transport system / permease component family protein K23536 nupC; general nucleoside transport system permease protein
D DK63_2541 branched-chain amino acid transport system / permease component family protein K23536 nupC; general nucleoside transport system permease protein
D DK63_3160 ABC transporter family protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DK63_2543 ABC transporter family protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DK63_2655 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D DK63_2654 binding--dependent transport system inner membrane component family protein K17316 gtsB; glucose/mannose transport system permease protein
D DK63_2653 binding--dependent transport system inner membrane component family protein K17317 gtsC; glucose/mannose transport system permease protein
D DK63_14 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DK63_2941 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DK63_13 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DK63_2938 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DK63_2939 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DK63_12 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DK63_3099 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D DK63_2272 periplasmic binding s and sugar binding domain of LacI family protein K10543 xylF; D-xylose transport system substrate-binding protein
D DK63_3101 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D DK63_2274 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D DK63_2273 ABC transporter family protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D DK63_3100 xylG; D-xylose ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D DK63_2805 periplasmic binding s and sugar binding domain of LacI family protein K17202 eryG; erythritol transport system substrate-binding protein
D DK63_2806 branched-chain amino acid transport system / permease component family protein K17203 eryF; erythritol transport system permease protein
D DK63_2807 ccmA; heme ABC exporter, ATP-binding protein CcmA K17204 eryE; erythritol transport system ATP-binding protein
D DK63_1032 periplasmic binding s and sugar binding domain of LacI family protein K17205 xltC; putative xylitol transport system substrate-binding protein
D DK63_1033 branched-chain amino acid transport system / permease component family protein K17206 xltB; putative xylitol transport system permease protein
D DK63_1034 ABC transporter family protein K17207 xltA; putative xylitol transport system ATP-binding protein
D DK63_2622 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D DK63_2623 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D DK63_2625 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D DK63_2626 ABC transporter family protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D DK63_1501 PBP superfamily domain protein K02040 pstS; phosphate transport system substrate-binding protein
D DK63_1502 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D DK63_1503 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D DK63_1504 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DK63_2891 bacterial extracellular solute-binding s, 3 family protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D DK63_198 bacterial extracellular solute-binding s, 3 family protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D DK63_199 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09970 aapQ; general L-amino acid transport system permease protein
D DK63_201 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09971 aapM; general L-amino acid transport system permease protein
D DK63_202 ABC transporter family protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DK63_1326 ABC transporter family protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DK63_2645 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DK63_2646 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D DK63_2647 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D DK63_3177 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_3142 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_720 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2897 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2373 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2380 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1170 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1559 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2614 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_3122 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1175 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3178 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3123 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3143 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2900 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2615 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2374 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3125 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3144 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_1174 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_3179 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_2901 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_3180 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3146 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2898 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_1173 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2618 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2620 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3126 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3147 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_1172 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3181 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2375 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2899 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2903 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DK63_1536 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DK63_2905 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D DK63_2904 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D DK63_2511 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2512 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2510 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DK63_2509 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DK63_2508 nikE; nickel import ATP-binding protein NikE K10823 oppF; oligopeptide transport system ATP-binding protein
D DK63_989 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DK63_988 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DK63_987 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D DK63_986 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein
D DK63_985 ABC transporter family protein K12371 dppD; dipeptide transport system ATP-binding protein
D DK63_984 ABC transporter family protein K12372 dppF; dipeptide transport system ATP-binding protein
D DK63_2755 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein
D DK63_2754 nikB; nickel ABC transporter, permease subunit NikB K15585 nikB; nickel transport system permease protein
D DK63_2753 nikC; nickel ABC transporter, permease subunit NikC K15586 nikC; nickel transport system permease protein
D DK63_2752 nikD; nickel import ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DK63_2751 nikE; nickel import ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DK63_1556 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D DK63_1557 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D DK63_1555 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein
D DK63_1554 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein
D DK63_1553 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D DK63_3069 periplasmic solute binding family protein K09815 znuA; zinc transport system substrate-binding protein
D DK63_3071 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D DK63_3070 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DK63_787 cobalt uptake substrate-specific transmembrane region family protein K02007 cbiM; cobalt/nickel transport system permease protein
D DK63_789 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D DK63_790 ABC transporter family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DK63_791 ABC transporter family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DK63_786 hypothetical protein K10094 cbiK; nickel transport protein
D DK63_788 putative cobalamin biosynthesis CbiM protein K16915 cbiL; nickel transport protein
D DK63_1115 bioY family protein K03523 bioY; biotin transport system substrate-specific component
D DK63_2057 bioY family protein K03523 bioY; biotin transport system substrate-specific component
D DK63_2073 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DK63_2072 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DK63_274 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DK63_275 ABC transporter family protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DK63_1639 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D DK63_1638 ccmC; heme exporter CcmC family protein K02195 ccmC; heme exporter protein C
D DK63_1637 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D DK63_1636 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D DK63_143 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D DK63_142 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D DK63_1697 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DK63_2285 ABC-2 transporter family protein K19341 nosY; Cu-processing system permease protein
D DK63_2284 ABC transporter family protein K19340 nosF; Cu-processing system ATP-binding protein
D DK63_1361 putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DK63_1362 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DK63_2991 ABC transporter family protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DK63_1998 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D DK63_952 ABC transporter family protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DK63_951 ABC transporter family protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DK63_2485 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D DK63_2484 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D DK63_1074 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DK63_1073 ftsX-like permease family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DK63_903 ABC transporter transmembrane region 2 family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:bmel02060]
D DK63_1462 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D DK63_1461 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DK63_1246 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D DK63_1700 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:bmel03070]
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
D DK63_337 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_750 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_679 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DK63_573 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DK63_645 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DK63_336 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DK63_2967 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DK63_1312 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DK63_1303 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DK63_1439 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DK63_1206 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DK63_328 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D DK63_329 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D DK63_330 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DK63_2094 transglycosylase SLT domain protein K03194 virB1; type IV secretion system protein VirB1
D DK63_2093 trbC/VIRB2 family protein K03197 virB2; type IV secretion system protein VirB2
D DK63_2092 type IV secretory pathway, VirB3-like family protein K03198 virB3; type IV secretion system protein VirB3
D DK63_2090 virB5; P-type DNA transfer protein VirB5 K03200 virB5; type IV secretion system protein VirB5
D DK63_2088 putative traI protein K03202 virB7; type IV secretion system protein VirB7
D DK63_2086 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D DK63_2089 trbL/VirB6 plasmid conjugal transfer family protein K03201 virB6; type IV secretion system protein VirB6
D DK63_2087 virB8; type IV secretion system protein virB8 K03203 virB8; type IV secretion system protein VirB8
D DK63_2085 bacterial conjugation TrbI-like family protein K03195 virB10; type IV secretion system protein VirB10
D DK63_2091 ptlC; type IV secretion system protein ptlC K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D DK63_2084 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bmel02020]
D DK63_1868 his Kinase A domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DK63_1506 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DK63_633 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DK63_1501 PBP superfamily domain protein K02040 pstS; phosphate transport system substrate-binding protein
D DK63_930 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DK63_929 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DK63_73 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_812 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_3095 fliC; flagellin K02406 fliC; flagellin
D DK63_2149 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DK63_239 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DK63_1548 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DK63_2559 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D DK63_1459 HAMP domain protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D DK63_1458 response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D DK63_2825 hpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D DK63_2184 hpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D DK63_1907 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DK63_2306 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2305 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2303 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2304 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D DK63_1683 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DK63_443 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D DK63_556 his Kinase A domain protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DK63_555 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DK63_2692 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_2720 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_442 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_554 sensory box protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DK63_553 bacterial regulatory, Fis family protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1698 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DK63_78 sensory box protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D DK63_2585 pleD; response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D DK63_46 his Kinase A domain protein K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D DK63_2586 divK; response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D DK63_476 sensory box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D DK63_998 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D DK63_999 ctrA; response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D DK63_3196 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D DK63_2342 glsA1; glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2]
D DK63_1673 regB; sensor histidine kinase regB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D DK63_1676 regA; photosynthetic apparatus regulatory protein regA K15012 regA; two-component system, response regulator RegA
D DK63_950 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D DK63_949 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DK63_948 cytochrome C1 family protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D DK63_1586 cytochrome c family protein K08738 CYC; cytochrome c
D DK63_2189 cycA; cytochrome c2 K08738 CYC; cytochrome c
D DK63_1929 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D DK63_1928 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D DK63_1927 cbb3-type cytochrome oxidase component FixQ family protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D DK63_1926 ccoP; cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D DK63_2486 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DK63_2487 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DK63_2488 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
D DK63_236 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DK63_2397 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DK63_1627 low molecular weight phosphotyrosine phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:bmel04148]
D DK63_2842 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D DK63_2122 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D DK63_950 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bmel02024]
D DK63_550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DK63_450 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DK63_796 phenazine biosynthesis, PhzF family protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D DK63_2341 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D DK63_2762 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DK63_2330 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DK63_2136 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DK63_2758 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DK63_2333 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DK63_2134 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DK63_2760 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DK63_2332 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DK63_2135 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DK63_2761 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DK63_2331 polyamine ABC transporter, ATP-binding family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DK63_2133 polyamine ABC transporter, ATP-binding family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DK63_3177 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_3142 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_720 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2897 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2373 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2380 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1170 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1559 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2614 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_3122 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1175 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3178 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3123 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3143 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2900 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2615 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2374 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3125 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3144 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_1174 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_3179 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_2901 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_3180 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3146 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2898 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_1173 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2618 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2620 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3126 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3147 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_1172 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3181 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2375 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2899 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_1043 bacterial transcriptional regulator family protein K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor
D DK63_1860 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DK63_3072 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DK63_220 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DK63_2511 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2512 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2510 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DK63_2509 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DK63_2508 nikE; nickel import ATP-binding protein NikE K10823 oppF; oligopeptide transport system ATP-binding protein
D DK63_3049 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2389 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2739 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_3035 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_3042 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2550 transmembrane protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2958 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_3052 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_2388 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_2738 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_3034 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_3041 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_2957 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_3053 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2387 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2737 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_3033 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2956 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2385 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_2736 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_3054 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_2955 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_3032 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_3038 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_2735 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_2384 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_2954 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_3031 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_3055 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_3037 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_2967 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DK63_337 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_750 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_679 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DK63_573 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DK63_645 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DK63_336 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DK63_1312 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DK63_1303 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DK63_1439 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DK63_1206 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bmel02030]
D DK63_14 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DK63_2941 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DK63_989 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DK63_988 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DK63_2148 flagellar motor switch FliM family protein K02416 fliM; flagellar motor switch protein FliM
D DK63_2145 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DK63_2149 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DK63_1110 ompA family protein K02557 motB; chemotaxis protein MotB
D DK63_3091 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bmel02040]
D DK63_2171 flagellar hook-basal body complex FliE family protein K02408 fliE; flagellar hook-basal body complex protein FliE
D DK63_3093 hypothetical protein K02409 fliF; flagellar M-ring protein FliF
D DK63_3094 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DK63_2153 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DK63_2177 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D DK63_2148 flagellar motor switch FliM family protein K02416 fliM; flagellar motor switch protein FliM
D DK63_2145 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DK63_2178 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DK63_3080 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DK63_3077 bacterial export s, 1 family protein K02421 fliR; flagellar biosynthesis protein FliR
D DK63_3078 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DK63_2142 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DK63_2173 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DK63_2169 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DK63_2170 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DK63_3081 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DK63_3086 flgE; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D DK63_2151 flagellar hook-basal body family protein K02391 flgF; flagellar basal-body rod protein FlgF
D DK63_2172 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DK63_2176 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D DK63_2174 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D DK63_3075 rod binding family protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D DK63_3085 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DK63_3084 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D DK63_3095 fliC; flagellin K02406 fliC; flagellin
D DK63_2149 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DK63_1110 ompA family protein K02557 motB; chemotaxis protein MotB
D DK63_3091 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D DK63_3090 putative chemotaxis motc protein K10564 motC; chemotaxis protein MotC
D DK63_3089 flagellar hook-length control FliK family protein K10565 motD; chemotaxis protein MotD
D DK63_2645 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DK63_894 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DK63_1698 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DK63_569 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:bmel04980]
D DK63_1340 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DK63_624 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DK63_1726 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bmel01501]
D DK63_325 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DK63_2511 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2512 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2510 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DK63_2509 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DK63_2508 nikE; nickel import ATP-binding protein NikE K10823 oppF; oligopeptide transport system ATP-binding protein
D DK63_529 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2337 bepF; efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_1862 bepD; efflux pump periplasmic linker BepD K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_528 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D DK63_1863 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D DK63_2336 bepG; efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
D DK63_1658 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_360 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_52 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_853 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bmel01502]
D DK63_844 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_699 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_2865 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DK63_851 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DK63_850 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DK63_847 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bmel01503]
D DK63_1314 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DK63_359 amiB; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DK63_73 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_812 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_529 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2337 bepF; efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_1862 bepD; efflux pump periplasmic linker BepD K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_528 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D DK63_1863 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D DK63_2336 bepG; efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
D DK63_587 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DK63_2559 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bmel01000]
C 01001 Protein kinases [BR:bmel01001]
D DK63_2396 chain length determinant family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D DK63_1868 his Kinase A domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DK63_930 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DK63_1459 HAMP domain protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D DK63_2241 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DK63_1906 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DK63_556 his Kinase A domain protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DK63_554 sensory box protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DK63_78 sensory box protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D DK63_46 his Kinase A domain protein K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D DK63_476 sensory box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D DK63_1673 regB; sensor histidine kinase regB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bmel01009]
D DK63_1463 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DK63_810 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:bmel01002]
D DK63_1688 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DK63_2362 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DK63_2927 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase
D DK63_2002 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DK63_3203 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DK63_2855 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DK63_2556 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DK63_630 intracellular protease, PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D DK63_882 linear amide C-N hydrolase, choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D DK63_217 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D DK63_401 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D DK63_79 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DK63_2822 peptidase M3 family protein K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D DK63_2106 oligoendopeptidase, pepF/M3 family protein K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D DK63_2219 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DK63_2220 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DK63_1543 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DK63_144 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DK63_2621 dipeptidase AC, Metallo peptidase, MEROPS family M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D DK63_2974 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DK63_708 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DK63_835 metallopeptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DK63_1509 thermophilic metalloprotease family protein K19689 ampS; aminopeptidase [EC:3.4.11.-]
D DK63_1090 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DK63_1195 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DK63_591 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DK63_2988 penicillin-insensitive murein endopeptidase family protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D DK63_2890 dap; D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D DK63_2505 peptidase S58 family protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D DK63_73 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_812 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_38 prolyl oligopeptidase family protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D DK63_431 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DK63_548 clp protease family protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DK63_546 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DK63_581 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D DK63_117 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DK63_1883 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D DK63_1216 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DK63_3044 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DK63_1694 sppA; signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D DK63_1447 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DK63_2296 peptidase U32 family protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D DK63_2297 peptidase U32 family protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D DK63_2223 modulator of DNA gyrase family protein K03592 pmbA; PmbA protein
D DK63_2018 modulator of DNA gyrase family protein K03568 tldD; TldD protein
D DK63_814 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D DK63_815 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bmel01003]
D DK63_1161 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DK63_1658 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_360 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_52 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_2409 glycosyl transferase 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DK63_1652 hypothetical protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bmel01005]
D DK63_587 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DK63_585 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DK63_840 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DK63_589 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DK63_586 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DK63_2228 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DK63_299 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DK63_2227 3-Deoxy-D-manno-octulosonic-acid transferase family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DK63_1314 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D DK63_570 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DK63_1585 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DK63_2098 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DK63_914 glycosyl transferases group 1 family protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D DK63_2409 glycosyl transferase 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmel01011]
D DK63_1824 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DK63_845 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DK63_846 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DK63_849 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DK63_852 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DK63_844 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_699 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DK63_2865 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DK63_628 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DK63_850 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DK63_847 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DK63_2984 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DK63_1682 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DK63_1658 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_360 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_52 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DK63_853 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DK63_431 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DK63_1161 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DK63_217 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D DK63_401 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D DK63_2988 penicillin-insensitive murein endopeptidase family protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D DK63_103 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DK63_1442 mltA; membrane-bound lytic murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D DK63_2095 lytic murein transglycosylase family protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DK63_2015 yceG-like family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DK63_430 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DK63_1499 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DK63_359 amiB; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bmel01004]
D DK63_2011 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DK63_2468 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DK63_229 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DK63_1533 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DK63_2014 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_301 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_302 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DK63_3183 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2729 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2376 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2012 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_2959 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DK63_1534 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D DK63_588 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DK63_1977 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_1532 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DK63_1628 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DK63_1270 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D DK63_920 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D DK63_2432 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1193 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DK63_1126 AMP-binding enzyme family protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D DK63_1566 acetoacetate-CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D DK63_1567 AMP-binding enzyme family protein K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D DK63_1860 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DK63_228 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DK63_2575 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DK63_1359 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bmel01008]
D DK63_3166 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D DK63_3163 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D DK63_3167 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D DK63_3169 condensation domain protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01006 Prenyltransferases [BR:bmel01006]
D DK63_1162 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D DK63_1960 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DK63_593 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DK63_339 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D DK63_809 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DK63_1973 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DK63_2022 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bmel01007]
D DK63_2743 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D DK63_583 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_454 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_1049 tRNA synthetases class I (E and Q), catalytic domain protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D DK63_368 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DK63_1681 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DK63_132 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DK63_323 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DK63_434 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DK63_2213 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DK63_388 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DK63_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DK63_208 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DK63_2202 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DK63_1962 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DK63_1963 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DK63_331 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DK63_273 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DK63_507 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DK63_634 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DK63_1486 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DK63_1487 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DK63_907 beta-eliminating lyase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DK63_702 aminotransferase class I and II family protein K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D DK63_1352 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_95 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_96 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DK63_1887 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D DK63_2471 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DK63_2868 beta-eliminating lyase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DK63_2799 aminotransferase class-III family protein K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D DK63_1870 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DK63_2469 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DK63_3023 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DK63_2414 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DK63_2876 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DK63_1086 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DK63_2074 perosamine synthetase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bmel00194]
D DK63_1180 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DK63_1181 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DK63_1182 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DK63_1183 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DK63_1184 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DK63_1949 plant ATP synthase F0 family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DK63_1950 ATP synthase B/B' CF family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DK63_1948 ATP synthase subunit C family protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DK63_1947 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DK63_1946 F0F1-ATPase subunit family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bmel03000]
D DK63_2606 helix-turn-helix domain protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DK63_2600 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator
D DK63_1935 methylated-DNA-[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DK63_2832 methylated-DNA-[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DK63_2347 bacterial regulatory, arsR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DK63_2849 bacterial regulatory helix-turn-helix, lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DK63_2608 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D DK63_2354 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DK63_2671 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DK63_2749 lysR substrate binding domain protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D DK63_1735 deoR-like helix-turn-helix domain protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D DK63_19 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DK63_2309 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DK63_1741 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DK63_2271 bacterial regulatory s, lacI family protein K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D DK63_540 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D DK63_2869 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D DK63_2489 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D DK63_2856 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D DK63_3129 UTRA domain protein K03710 K03710; GntR family transcriptional regulator
D DK63_2192 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DK63_23 betI; transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D DK63_1861 bepR; HTH-type transcriptional repressor BepR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D DK63_1850 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator
D DK63_2443 bacterial regulatory s, tetR family protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D DK63_2684 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DK63_975 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DK63_1077 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D DK63_315 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D DK63_2725 asnC family protein K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
D DK63_2141 vjbR; HTH-type quorum sensing-dependent transcriptional regulator vjbR K21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR
D DK63_1179 marR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D DK63_2714 marR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D DK63_2451 iclR helix-turn-helix domain protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D DK63_2829 ohrR; transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DK63_1756 hmrR; HTH-type transcriptional regulator hmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D DK63_1056 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DK63_3072 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DK63_1535 ferric uptake regulator family protein K09826 irr; Fur family transcriptional regulator, iron response regulator
D DK63_1930 ferric uptake regulator family protein K09826 irr; Fur family transcriptional regulator, iron response regulator
D DK63_2605 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D DK63_1043 bacterial transcriptional regulator family protein K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor
D DK63_111 aadR; transcriptional activatory protein AadR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DK63_2308 cyclic nucleotide-binding domain protein K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D DK63_2290 bacterial regulatory s, crp family protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D DK63_2270 cyclic nucleotide-binding domain protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D DK63_2535 Rrf2 family protein K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator
D DK63_621 helix-turn-helix family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D DK63_1012 hypothetical protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D DK63_269 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DK63_2756 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D DK63_2683 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DK63_2280 4Fe-4S binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D DK63_1670 frmR; transcriptional repressor frmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D DK63_1387 bolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D DK63_1422 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DK63_3152 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DK63_1154 carD-like/TRCF domain protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D DK63_1709 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D DK63_1748 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D DK63_2588 rnk; prokaryotic transcription elongation factor GreA/GreB K06140 rnk; regulator of nucleoside diphosphate kinase
D DK63_2033 hypothetical protein K07735 algH; putative transcriptional regulator
D DK63_473 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DK63_219 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D DK63_318 sel1 repeat family protein K25885 exoR; exopolysaccharide production negative regulator
C 03021 Transcription machinery [BR:bmel03021]
D DK63_641 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DK63_673 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DK63_672 DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DK63_108 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DK63_894 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DK63_1061 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DK63_3173 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DK63_1153 RNA polymerase sigma factor, sigma-70 family protein K03089 rpoH; RNA polymerase sigma-32 factor
D DK63_1052 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D DK63_1698 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DK63_1523 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D DK63_223 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DK63_678 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DK63_473 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DK63_915 greA; transcription elongation factor GreA domain protein K03624 greA; transcription elongation factor GreA
D DK63_1430 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bmel03019]
D DK63_358 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DK63_118 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DK63_270 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D DK63_2579 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DK63_488 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DK63_1664 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DK63_569 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DK63_1529 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DK63_1430 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DK63_1489 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DK63_2209 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DK63_550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DK63_205 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DK63_1866 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DK63_960 poly A polymerase head domain protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DK63_1215 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DK63_1671 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:bmel03011]
D DK63_1574 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DK63_597 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DK63_659 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DK63_280 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DK63_648 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DK63_2010 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DK63_669 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DK63_651 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D DK63_242 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D DK63_666 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DK63_642 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DK63_670 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DK63_643 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DK63_652 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D DK63_1528 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DK63_1204 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DK63_656 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DK63_2009 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DK63_661 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DK63_1547 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DK63_2909 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DK63_676 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DK63_662 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DK63_665 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DK63_664 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DK63_653 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D DK63_650 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DK63_2007 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DK63_675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DK63_677 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DK63_674 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DK63_243 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DK63_655 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DK63_646 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DK63_658 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DK63_640 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DK63_649 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DK63_1279 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DK63_1484 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DK63_1229 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DK63_660 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DK63_663 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DK63_654 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DK63_1228 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DK63_1378 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DK63_657 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DK63_647 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DK63_1112 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DK63_1160 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DK63_2584 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DK63_1483 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DK63_1139 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DK63_941 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D DK63_1038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_3061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_1235 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_1042 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_3065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_1239 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_1039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_1236 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_3062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bmel03009]
D DK63_118 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DK63_119 era; GTP-binding protein Era K03595 era; GTPase
D DK63_1224 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D DK63_473 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DK63_1523 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D DK63_223 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DK63_678 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DK63_138 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DK63_2359 ubiE/COQ5 methyltransferase family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DK63_1196 nusB family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DK63_1530 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D DK63_2218 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DK63_2715 RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DK63_1424 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DK63_855 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DK63_1715 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DK63_1993 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D DK63_684 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DK63_2649 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DK63_1219 putative SPOUT methyltransferase family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DK63_1690 SAM dependent methyltransferase domain protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DK63_1691 SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DK63_160 ribosomal RNA small subunit methyltransferase D, RsmJ family protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D DK63_1621 rlmN; 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DK63_1994 methyltransferase small domain protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DK63_2217 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DK63_438 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DK63_1053 pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DK63_1512 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DK63_2035 acetyltransferase family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D DK63_1287 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D DK63_2539 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DK63_834 ribosomal L11 methyltransferase family protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DK63_358 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DK63_2572 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DK63_1664 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DK63_1943 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D DK63_549 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D DK63_1964 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DK63_109 rsh; GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DK63_1526 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DK63_1522 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D DK63_1220 oligomerization domain protein K09710 ybeB; ribosome-associated protein
D DK63_1516 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D DK63_1699 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D DK63_943 50S ribosome-binding GTPase family protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bmel03016]
D DK63_158 ribonuclease T2 family protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D DK63_583 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_454 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_273 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DK63_2213 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DK63_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DK63_434 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DK63_323 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DK63_208 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DK63_634 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DK63_507 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DK63_331 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DK63_132 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DK63_388 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DK63_2202 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DK63_1486 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DK63_1487 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DK63_368 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DK63_1681 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DK63_490 threonyl and Alanyl tRNA synthetase second additional domain protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D DK63_603 hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DK63_1521 methyltransferase family protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DK63_2976 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DK63_1527 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DK63_372 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DK63_1964 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DK63_809 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DK63_1426 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DK63_1425 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DK63_1731 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DK63_2966 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DK63_1710 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DK63_1661 3'-5' exonuclease family protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D DK63_207 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D DK63_1626 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D DK63_2743 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D DK63_1962 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DK63_1963 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DK63_1049 tRNA synthetases class I (E and Q), catalytic domain protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D DK63_2837 DNA-binding protein, putative K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D DK63_2216 codA; cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DK63_312 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D DK63_1514 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DK63_1302 radical SAM methylthiotransferase, MiaB/RimO family protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DK63_629 RNA methyltransferase, TrmH, group 1 family protein K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D DK63_340 trmFO; m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DK63_1286 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DK63_953 spoU rRNA Methylase family protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DK63_1689 RNA 2'-O ribose methyltransferase substrate binding family protein K03437 spoU; RNA methyltransferase, TrmH family
D DK63_992 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DK63_281 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DK63_1395 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DK63_382 sufA; FeS assembly scaffold SufA K13628 iscA; iron-sulfur cluster assembly protein
D DK63_123 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D DK63_532 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DK63_1337 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DK63_1338 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DK63_1339 queE; 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DK63_618 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DK63_2986 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DK63_531 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DK63_418 tRNA-guanine transglycosylase family protein K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DK63_1091 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DK63_1511 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DK63_1261 tRNA threonylcarbamoyl adenosine modification protein YgjD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DK63_2579 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DK63_1529 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bmel03012]
D DK63_1525 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DK63_1481 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DK63_147 ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DK63_596 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DK63_681 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DK63_667 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DK63_668 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DK63_1245 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DK63_594 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D DK63_1244 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DK63_942 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DK63_1819 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DK63_1107 efp; translation elongation factor P K02356 efp; elongation factor P
D DK63_361 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DK63_3006 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D DK63_1455 RF-1 domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:bmel03110]
D DK63_604 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D DK63_1242 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DK63_547 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DK63_1446 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DK63_1489 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DK63_1944 hsp70 family protein K04046 yegD; hypothetical chaperone protein
D DK63_2209 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DK63_1490 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DK63_860 dnaJ domain protein K05801 djlA; DnaJ like chaperone protein
D DK63_1872 hsp33 family protein K04083 hslO; molecular chaperone Hsp33
D DK63_1708 grpE family protein K03687 GRPE; molecular chaperone GrpE
D DK63_3201 hsp20/alpha crystallin family protein K04080 ibpA; molecular chaperone IbpA
D DK63_1156 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D DK63_2210 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES
D DK63_73 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_812 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DK63_1090 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DK63_1947 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DK63_1439 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DK63_2344 hdeA; chaperone-like protein hdeA K19777 hdeA; acid stress chaperone HdeA
D DK63_1598 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D DK63_575 PPIC-type PPIASE domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DK63_2302 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D DK63_1311 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D DK63_140 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DK63_1469 trxA; thioredoxin K03671 TXN; thioredoxin
D DK63_2836 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D DK63_1252 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D DK63_285 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D DK63_1640 cycY; disulfide interchange protein CycY K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:bmel04131]
D DK63_149 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DK63_1123 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DK63_2993 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DK63_1141 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DK63_1199 major Facilitator Superfamily protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:bmel03032]
D DK63_2030 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DK63_545 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D DK63_230 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DK63_1693 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DK63_1548 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DK63_2005 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DK63_895 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DK63_3153 hypothetical protein K18996 repC; replication initiation protein RepC
D DK63_541 ssb4; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DK63_276 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DK63_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DK63_145 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DK63_1421 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DK63_433 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DK63_1438 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2952 exonuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2597 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_1581 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DK63_1951 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DK63_1663 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DK63_837 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DK63_537 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DK63_1665 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DK63_210 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DK63_2566 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DK63_2578 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bmel03036]
D DK63_118 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DK63_545 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D DK63_230 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DK63_1693 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DK63_1548 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DK63_2548 hemimethylated DNA binding domain protein K11940 hspQ; heat shock protein HspQ
D DK63_1510 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D DK63_550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DK63_2684 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DK63_975 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DK63_2049 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D DK63_326 scpA/B family protein K05896 scpA; segregation and condensation protein A
D DK63_327 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D DK63_842 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DK63_1362 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DK63_853 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DK63_1268 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DK63_2504 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DK63_854 hypothetical protein K03586 ftsL; cell division protein FtsL
D DK63_843 cell division FtsQ family protein K03589 ftsQ; cell division protein FtsQ
D DK63_848 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DK63_1361 putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DK63_841 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DK63_1120 cell division ZapA family protein K09888 zapA; cell division protein ZapA
D DK63_1299 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D DK63_359 amiB; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DK63_529 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2337 bepF; efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_1862 bepD; efflux pump periplasmic linker BepD K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2324 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D DK63_2325 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DK63_2326 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D DK63_1423 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DK63_3151 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein
D DK63_1422 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DK63_3152 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DK63_210 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DK63_2566 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DK63_1425 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DK63_1424 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DK63_340 trmFO; m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DK63_1288 phage integrase family protein K03733 xerC; integrase/recombinase XerC
D DK63_1392 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DK63_1601 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DK63_2968 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bmel03400]
D DK63_1723 methylated-DNA-[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DK63_2045 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DK63_1704 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DK63_1308 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DK63_1076 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DK63_1935 methylated-DNA-[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DK63_2832 methylated-DNA-[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DK63_2507 alkB; alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D DK63_106 uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DK63_82 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DK63_1048 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DK63_2200 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DK63_1545 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DK63_319 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DK63_1366 exodeoxyribonuclease III family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DK63_698 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DK63_837 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DK63_1663 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DK63_544 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DK63_922 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DK63_154 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DK63_830 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DK63_673 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DK63_672 DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DK63_641 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DK63_108 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DK63_2553 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DK63_1686 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DK63_2230 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D DK63_2717 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DK63_1987 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DK63_276 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DK63_1549 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DK63_145 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DK63_1421 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DK63_433 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DK63_1438 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2952 exonuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_2597 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DK63_1581 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DK63_541 ssb4; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DK63_635 recA; protein RecA K03553 recA; recombination protein RecA
D DK63_1101 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DK63_1100 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DK63_1102 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DK63_1186 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DK63_2004 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DK63_1550 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D DK63_2555 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DK63_121 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DK63_1579 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DK63_838 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DK63_1468 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D DK63_1467 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D DK63_32 ftsK/SpoIIIE family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D DK63_537 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DK63_1665 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DK63_2578 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DK63_545 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D DK63_230 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DK63_1693 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DK63_2589 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DK63_581 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D DK63_1614 hypothetical protein K14160 imuA; protein ImuA
D DK63_1613 impB/mucB/samB family protein K14161 imuB; protein ImuB
D DK63_1612 dnaE; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D DK63_2778 DEXH box helicase, DNA ligase-associated K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D DK63_480 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DK63_2322 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DK63_2323 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bmel03029]
D DK63_949 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DK63_1525 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DK63_1481 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DK63_596 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DK63_681 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DK63_667 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DK63_668 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DK63_226 ubiquinol-cytochrome C chaperone family protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D DK63_1157 hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D DK63_119 era; GTP-binding protein Era K03595 era; GTPase
D DK63_368 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DK63_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DK63_208 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DK63_323 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DK63_43 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DK63_2953 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DK63_2568 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DK63_346 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DK63_2569 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DK63_541 ssb4; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DK63_590 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D DK63_1489 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DK63_1708 grpE family protein K03687 GRPE; molecular chaperone GrpE
D DK63_2209 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DK63_2210 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES
D DK63_1490 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DK63_372 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DK63_285 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D DK63_1601 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DK63_2022 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DK63_2024 cytochrome c oxidase assembly CtaG/Cox11 family protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D DK63_239 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DK63_2967 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DK63_2027 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D DK63_2502 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D DK63_833 ahpC/TSA family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bmel02000]
D DK63_2991 ABC transporter family protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DK63_437 ndvA; beta-(1-->2)glucan export ATP-binding/permease protein NdvA K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3]
D DK63_1998 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D DK63_952 ABC transporter family protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DK63_951 ABC transporter family protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D DK63_1742 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DK63_1743 ABC transporter transmembrane region family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DK63_1111 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DK63_2485 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D DK63_2484 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D DK63_1074 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DK63_1073 ftsX-like permease family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DK63_903 ABC transporter transmembrane region 2 family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D DK63_1145 ccmA; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein
D DK63_756 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DK63_1648 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DK63_1649 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DK63_755 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DK63_1650 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DK63_754 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DK63_1651 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DK63_2112 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DK63_2113 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D DK63_2114 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DK63_3136 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DK63_2293 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DK63_3138 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DK63_2294 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DK63_3137 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DK63_2295 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DK63_2661 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DK63_2682 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DK63_2660 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DK63_2681 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DK63_2662 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DK63_2680 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DK63_1148 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D DK63_1149 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D DK63_1150 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D DK63_1011 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D DK63_1008 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D DK63_1009 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D DK63_1010 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DK63_2762 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DK63_2330 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DK63_2136 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DK63_2758 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DK63_2333 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DK63_2134 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DK63_2760 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DK63_2332 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DK63_2135 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DK63_2761 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DK63_2331 polyamine ABC transporter, ATP-binding family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DK63_2133 polyamine ABC transporter, ATP-binding family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DK63_3027 bacterial extracellular solute-binding family protein K11077 attC; mannopine transport system substrate-binding protein
D DK63_3026 binding--dependent transport system inner membrane component family protein K11078 attB; mannopine transport system permease protein
D DK63_3025 binding--dependent transport system inner membrane component family protein K11079 attA2; mannopine transport system permease protein
D DK63_3024 ABC transporter family protein K11080 attA1; mannopine transport system ATP-binding protein
D DK63_2696 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DK63_981 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DK63_2697 binding--dependent transport system inner membrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D DK63_982 choW; choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D DK63_2698 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DK63_983 choV; choline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DK63_1761 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D DK63_1758 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D DK63_1760 putative osmoprotectant uptake system permease protein yehY K05846 opuBD; osmoprotectant transport system permease protein
D DK63_1759 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D DK63_1749 NMT1-like family protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D DK63_1747 binding--dependent transport system inner membrane component family protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D DK63_2450 bacterial extracellular solute-binding s, 3 family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D DK63_2449 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D DK63_2314 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2496 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_3133 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2652 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2702 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_1774 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_2492 bacterial extracellular solute-binding family protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D DK63_2493 binding--dependent transport system inner membrane component family protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D DK63_2494 binding--dependent transport system inner membrane component family protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D DK63_2655 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D DK63_2654 binding--dependent transport system inner membrane component family protein K17316 gtsB; glucose/mannose transport system permease protein
D DK63_2653 binding--dependent transport system inner membrane component family protein K17317 gtsC; glucose/mannose transport system permease protein
D DK63_2310 bacterial extracellular solute-binding family protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D DK63_2311 binding--dependent transport system inner membrane component family protein K10237 thuF; trehalose/maltose transport system permease protein
D DK63_2312 binding--dependent transport system inner membrane component family protein K10238 thuG; trehalose/maltose transport system permease protein
D DK63_3099 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D DK63_2272 periplasmic binding s and sugar binding domain of LacI family protein K10543 xylF; D-xylose transport system substrate-binding protein
D DK63_3101 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D DK63_2274 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D DK63_2273 ABC transporter family protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D DK63_3100 xylG; D-xylose ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D DK63_2879 sbpA; multiple sugar-binding periplasmic protein sbpA K10546 chvE; putative multiple sugar transport system substrate-binding protein
D DK63_2877 branched-chain amino acid transport system / permease component family protein K10547 gguB; putative multiple sugar transport system permease protein
D DK63_2878 ABC transporter family protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_14 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DK63_2941 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DK63_13 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DK63_2938 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DK63_2939 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DK63_12 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DK63_2805 periplasmic binding s and sugar binding domain of LacI family protein K17202 eryG; erythritol transport system substrate-binding protein
D DK63_2806 branched-chain amino acid transport system / permease component family protein K17203 eryF; erythritol transport system permease protein
D DK63_2807 ccmA; heme ABC exporter, ATP-binding protein CcmA K17204 eryE; erythritol transport system ATP-binding protein
D DK63_1032 periplasmic binding s and sugar binding domain of LacI family protein K17205 xltC; putative xylitol transport system substrate-binding protein
D DK63_1033 branched-chain amino acid transport system / permease component family protein K17206 xltB; putative xylitol transport system permease protein
D DK63_1034 ABC transporter family protein K17207 xltA; putative xylitol transport system ATP-binding protein
D DK63_2622 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D DK63_2623 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D DK63_2625 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D DK63_2626 ABC transporter family protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D DK63_3162 basic membrane family protein K07335 bmpA; basic membrane protein A and related proteins
D DK63_2540 basic membrane family protein K07335 bmpA; basic membrane protein A and related proteins
D DK63_3161 basic membrane family protein K07335 bmpA; basic membrane protein A and related proteins
D DK63_3159 branched-chain amino acid transport system / permease component family protein K23535 nupB; general nucleoside transport system permease protein
D DK63_2542 branched-chain amino acid transport system / permease component family protein K23535 nupB; general nucleoside transport system permease protein
D DK63_3158 branched-chain amino acid transport system / permease component family protein K23536 nupC; general nucleoside transport system permease protein
D DK63_2541 branched-chain amino acid transport system / permease component family protein K23536 nupC; general nucleoside transport system permease protein
D DK63_3160 ABC transporter family protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DK63_2543 ABC transporter family protein K23537 nupA; general nucleoside transport system ATP-binding protein
D DK63_459 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DK63_457 STAS domain protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DK63_458 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DK63_460 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D DK63_2704 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D DK63_3130 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D DK63_1771 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D DK63_3132 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D DK63_1772 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D DK63_2705 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D DK63_3131 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D DK63_1773 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D DK63_766 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D DK63_767 periplasmic binding s and sugar binding domain of LacI family protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D DK63_765 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D DK63_11 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_764 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DK63_1501 PBP superfamily domain protein K02040 pstS; phosphate transport system substrate-binding protein
D DK63_1502 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D DK63_1503 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D DK63_1504 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DK63_2891 bacterial extracellular solute-binding s, 3 family protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D DK63_198 bacterial extracellular solute-binding s, 3 family protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D DK63_199 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09970 aapQ; general L-amino acid transport system permease protein
D DK63_201 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09971 aapM; general L-amino acid transport system permease protein
D DK63_202 ABC transporter family protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DK63_1326 ABC transporter family protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DK63_2645 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DK63_2646 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D DK63_2647 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D DK63_3177 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_3142 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_720 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2897 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2373 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2380 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1170 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1559 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_2614 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_3122 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DK63_1175 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3178 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3123 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_3143 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2900 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2615 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DK63_2374 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3125 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3144 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_1174 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_3179 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_2901 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DK63_3180 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_3146 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2898 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_1173 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2618 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DK63_2620 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3126 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3147 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_1172 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_3181 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2375 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2899 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DK63_2903 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DK63_1536 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DK63_2905 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D DK63_2904 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D DK63_1418 periplasmic binding domain protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D DK63_1419 branched-chain amino acid transport system / permease component family protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D DK63_1420 ABC transporter family protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D DK63_310 lysine-arginine-ornithine-binding periplasmic family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DK63_393 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DK63_1865 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DK63_1319 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DK63_1322 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D DK63_1323 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DK63_2511 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2512 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DK63_2510 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DK63_2509 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DK63_2508 nikE; nickel import ATP-binding protein NikE K10823 oppF; oligopeptide transport system ATP-binding protein
D DK63_989 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DK63_988 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DK63_987 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D DK63_986 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein
D DK63_985 ABC transporter family protein K12371 dppD; dipeptide transport system ATP-binding protein
D DK63_984 ABC transporter family protein K12372 dppF; dipeptide transport system ATP-binding protein
D DK63_2755 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein
D DK63_2754 nikB; nickel ABC transporter, permease subunit NikB K15585 nikB; nickel transport system permease protein
D DK63_2753 nikC; nickel ABC transporter, permease subunit NikC K15586 nikC; nickel transport system permease protein
D DK63_2752 nikD; nickel import ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DK63_2751 nikE; nickel import ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D DK63_3049 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2389 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2739 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_3035 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_3042 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2550 transmembrane protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_2958 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DK63_3052 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_2388 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_2738 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_3034 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_3041 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_2957 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DK63_3053 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2387 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2737 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_3033 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2956 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DK63_2385 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_2736 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_3054 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_2955 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_3032 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_3038 hypothetical protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DK63_2735 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_2384 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_2954 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_3031 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_3055 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_3037 hypothetical protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DK63_1556 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D DK63_1557 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D DK63_1555 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein
D DK63_1554 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein
D DK63_1553 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D DK63_2639 periplasmic binding family protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D DK63_2641 fecCD transport family protein K25283 yclO; iron-siderophore transport system permease protein
D DK63_2640 fecCD transport family protein K25284 yclN; iron-siderophore transport system permease protein
D DK63_2642 ABC transporter family protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D DK63_2710 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DK63_771 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DK63_2709 ABC 3 transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D DK63_770 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D DK63_2708 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DK63_768 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DK63_3069 periplasmic solute binding family protein K09815 znuA; zinc transport system substrate-binding protein
D DK63_3071 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D DK63_3070 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D DK63_789 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D DK63_787 cobalt uptake substrate-specific transmembrane region family protein K02007 cbiM; cobalt/nickel transport system permease protein
D DK63_790 ABC transporter family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DK63_791 ABC transporter family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D DK63_786 hypothetical protein K10094 cbiK; nickel transport protein
D DK63_788 putative cobalamin biosynthesis CbiM protein K16915 cbiL; nickel transport protein
D DK63_1115 bioY family protein K03523 bioY; biotin transport system substrate-specific component
D DK63_2057 bioY family protein K03523 bioY; biotin transport system substrate-specific component
D DK63_2073 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DK63_2072 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DK63_143 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D DK63_142 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D DK63_1697 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DK63_2285 ABC-2 transporter family protein K19341 nosY; Cu-processing system permease protein
D DK63_2284 ABC transporter family protein K19340 nosF; Cu-processing system ATP-binding protein
D DK63_274 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DK63_275 ABC transporter family protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DK63_1639 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D DK63_1638 ccmC; heme exporter CcmC family protein K02195 ccmC; heme exporter protein C
D DK63_1637 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D DK63_1636 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D DK63_1361 putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DK63_1362 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DK63_2446 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DK63_773 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DK63_2445 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DK63_1630 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DK63_374 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DK63_500 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D DK63_1904 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D DK63_1879 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D DK63_2205 gluP; glucose/galactose transporter WARNING family protein K02429 fucP; MFS transporter, FHS family, L-fucose permease
D DK63_868 MFS transporter, metabolite:H+ symporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D DK63_1081 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DK63_2231 sugar (and other) transporter family protein K08196 mucK; MFS transporter, AAHS family, cis,cis-muconate transporter
D DK63_30 major Facilitator Superfamily protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D DK63_2307 narK; nitrite transporter family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DK63_283 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DK63_819 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DK63_2728 sugar (and other) transporter family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D DK63_2137 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DK63_2453 putative membrane protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DK63_495 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DK63_2962 sugar (and other) transporter family protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D DK63_113 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D DK63_1199 major Facilitator Superfamily protein K06902 UMF1; MFS transporter, UMF1 family
D DK63_2506 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D DK63_1246 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D DK63_1462 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D DK63_1461 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DK63_1700 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DK63_1364 aqpZ2; aquaporin Z 2 K06188 aqpZ; aquaporin Z
D DK63_1269 amt; ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D DK63_906 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_157 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_392 glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_2947 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_2985 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DK63_1886 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D DK63_748 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D DK63_478 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D DK63_2821 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D DK63_785 yut; urea transporter K08717 utp; urea transporter
D DK63_2149 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DK63_1110 ompA family protein K02557 motB; chemotaxis protein MotB
D DK63_3091 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D DK63_1069 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D DK63_1070 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D DK63_1098 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D DK63_1097 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D DK63_28 corA-like Mg2+ transporter family protein K03284 corA; magnesium transporter
D DK63_2770 crcB-like family protein K06199 crcB; fluoride exporter
D DK63_2771 crcB-like family protein K06199 crcB; fluoride exporter
D DK63_793 crcB-like family protein K06199 crcB; fluoride exporter
D DK63_1388 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DK63_156 porin subfamily protein K16079 omp31; outer membrane immunogenic protein
D DK63_1659 outer membrane autotransporter barrel domain protein K16079 omp31; outer membrane immunogenic protein
D DK63_1660 outer membrane autotransporter barrel domain protein K16079 omp31; outer membrane immunogenic protein
D DK63_414 outer membrane autotransporter barrel domain protein K16079 omp31; outer membrane immunogenic protein
D DK63_710 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D DK63_2404 opacity porin family protein K16079 omp31; outer membrane immunogenic protein
D DK63_1023 outer membrane autotransporter barrel domain protein K16079 omp31; outer membrane immunogenic protein
D DK63_390 outer membrane beta-barrel domain protein K06076 fadL; long-chain fatty acid transport protein
D DK63_2188 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D DK63_3096 autotransporter-associated beta strand repeat family protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D DK63_3097 outer membrane autotransporter barrel domain protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D DK63_772 tonB dependent receptor family protein K16092 btuB; vitamin B12 transporter
D DK63_3140 bhuA; heme transporter BhuA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D DK63_2944 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
D DK63_236 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DK63_2397 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DK63_590 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D DK63_839 yfiO; outer membrane assembly lipoYfiO family protein K05807 bamD; outer membrane protein assembly factor BamD
D DK63_1593 surface antigen variable number repeat family protein K07278 tamA; translocation and assembly module TamA
D DK63_1594 hypothetical protein K09800 tamB; translocation and assembly module TamB
D DK63_1615 coiled stalk of trimeric autotransporter adhesin family protein K19232 btaE; hyaluronate-binding autotransporter adhesin
D DK63_1616 coiled stalk of trimeric autotransporter adhesin family protein K19232 btaE; hyaluronate-binding autotransporter adhesin
D DK63_1225 hypothetical protein K19233 btaF; ECM component-binding autotransporter adhesin
D DK63_1696 ostA-like family protein K09774 lptA; lipopolysaccharide export system protein LptA
D DK63_1695 lipopolysaccharide-assembly, LptC-related family protein K11719 lptC; lipopolysaccharide export system protein LptC
D DK63_141 organic solvent tolerance family protein K04744 lptD; LPS-assembly protein
D DK63_1188 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein
D DK63_1517 transporter associated domain protein K06189 corC; hemolysin (HlyC) family protein
D DK63_1894 lrgA family protein K06518 cidA; holin-like protein
D DK63_2081 cycA; cytochrome c2 K11737 cycA; D-serine/D-alanine/glycine transporter
D DK63_2341 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D DK63_2050 cation diffusion facilitator transporter family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D DK63_528 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D DK63_1863 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D DK63_2336 bepG; efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D DK63_2857 acrB/AcrD/AcrF family protein K21134 triC; multidrug efflux pump
D DK63_369 small Multidrug Resistance family protein K03297 emrE; small multidrug resistance pump
D DK63_232 sugE; quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D DK63_730 eamA-like transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D DK63_136 eamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D DK63_173 L-lactate permease family protein K03303 lutP; lactate permease
D DK63_2222 transporter, monovalent cation:proton antiporter-2 family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D DK63_751 ybaL; inner membrane protein ybaL K26735 KEA4_5_6; K+:H+ antiporter
D DK63_912 cation transport family protein K03498 trkH; trk/ktr system potassium uptake protein
D DK63_552 trkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D DK63_2422 putative pyrimidine permease RutG K09016 rutG; putative pyrimidine permease RutG
D DK63_2629 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D DK63_1479 benzoate transporter family protein K05782 benE; benzoate membrane transport protein
D DK63_2042 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D DK63_2351 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D DK63_856 metal ion transporter, metal ion family protein K03322 mntH; manganese transport protein
D DK63_896 na+/Pi-cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D DK63_2477 cpa3; monovalent cation:proton antiporter family protein K05559 phaA; multicomponent K+:H+ antiporter subunit A
D DK63_2478 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein K05560 phaC; multicomponent K+:H+ antiporter subunit C
D DK63_2479 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K05561 phaD; multicomponent K+:H+ antiporter subunit D
D DK63_2480 na+/H+ ion antiporter subunit K05562 phaE; multicomponent K+:H+ antiporter subunit E
D DK63_2481 multiple resistance and pH regulation F family protein K05563 phaF; multicomponent K+:H+ antiporter subunit F
D DK63_2482 monovalent cation/proton antiporter, MnhG/PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G
D DK63_2410 polysaccharide biosynthesis family protein K16695 wzxC; lipopolysaccharide exporter
D DK63_1682 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DK63_864 membrane transport family protein K13936 mdcF; malonate transporter and related proteins
D DK63_803 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D DK63_131 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DK63_1292 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D DK63_2726 azlC family protein K26605 azlC; branched chain amino acid efflux pump
D DK63_2727 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D DK63_1377 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D DK63_1080 rubrerythrin family protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D DK63_538 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D DK63_848 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DK63_2365 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D DK63_2363 fe2+ transport family protein K07230 p19; periplasmic iron binding protein
D DK63_2118 high-affinity nickel-transport family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D DK63_1071 hypothetical protein K03832 tonB; periplasmic protein TonB
D DK63_1094 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D DK63_1095 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D DK63_224 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D DK63_2558 cytochrome C biogenesis transmembrane region family protein K06196 ccdA; cytochrome c-type biogenesis protein
D DK63_2306 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2305 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2303 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DK63_2138 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D DK63_496 hlyD secretion family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D DK63_529 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2337 bepF; efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_1862 bepD; efflux pump periplasmic linker BepD K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2859 efflux transporter, RND family, MFP subunit K21136 triA; membrane fusion protein, multidrug efflux system
D DK63_2858 efflux transporter, RND family, MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system
D DK63_1075 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D DK63_2396 chain length determinant family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D DK63_1940 sbmA; protein sbmA K17938 sbmA; peptide/bleomycin uptake transporter
D DK63_71 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D DK63_3192 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D DK63_2059 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:bmel02044]
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
D DK63_1357 YGGT family protein K02221 yggT; YggT family protein
D DK63_3078 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DK63_2142 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DK63_3093 hypothetical protein K02409 fliF; flagellar M-ring protein FliF
D DK63_3094 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DK63_2153 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DK63_2145 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DK63_2178 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DK63_3080 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DK63_3077 bacterial export s, 1 family protein K02421 fliR; flagellar biosynthesis protein FliR
D DK63_2094 transglycosylase SLT domain protein K03194 virB1; type IV secretion system protein VirB1
D DK63_2093 trbC/VIRB2 family protein K03197 virB2; type IV secretion system protein VirB2
D DK63_2092 type IV secretory pathway, VirB3-like family protein K03198 virB3; type IV secretion system protein VirB3
D DK63_2091 ptlC; type IV secretion system protein ptlC K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D DK63_2090 virB5; P-type DNA transfer protein VirB5 K03200 virB5; type IV secretion system protein VirB5
D DK63_2089 trbL/VirB6 plasmid conjugal transfer family protein K03201 virB6; type IV secretion system protein VirB6
D DK63_2088 putative traI protein K03202 virB7; type IV secretion system protein VirB7
D DK63_2087 virB8; type IV secretion system protein virB8 K03203 virB8; type IV secretion system protein VirB8
D DK63_2086 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D DK63_2085 bacterial conjugation TrbI-like family protein K03195 virB10; type IV secretion system protein VirB10
D DK63_2084 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D DK63_2188 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D DK63_1312 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DK63_1439 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DK63_337 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_750 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D DK63_679 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DK63_573 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DK63_645 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DK63_1206 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DK63_1303 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DK63_336 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DK63_2967 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DK63_328 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D DK63_329 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D DK63_330 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bmel02042]
D DK63_1388 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DK63_1611 hemolysin-III related family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bmel02022]
D DK63_1868 his Kinase A domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DK63_1506 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DK63_930 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DK63_929 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DK63_1459 HAMP domain protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D DK63_1458 response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D DK63_3087 ftcR; flagellar transcriptional regulator ftcR K21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR
D DK63_2241 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DK63_2242 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DK63_74 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DK63_2456 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DK63_66 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DK63_1907 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DK63_1906 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DK63_556 his Kinase A domain protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DK63_555 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DK63_554 sensory box protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DK63_553 bacterial regulatory, Fis family protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DK63_78 sensory box protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D DK63_46 his Kinase A domain protein K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D DK63_2585 pleD; response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D DK63_2586 divK; response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D DK63_476 sensory box protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D DK63_999 ctrA; response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D DK63_3196 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D DK63_1673 regB; sensor histidine kinase regB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D DK63_1676 regA; photosynthetic apparatus regulatory protein regA K15012 regA; two-component system, response regulator RegA
C 02035 Bacterial motility proteins [BR:bmel02035]
D DK63_2153 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DK63_2178 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DK63_3080 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DK63_3077 bacterial export s, 1 family protein K02421 fliR; flagellar biosynthesis protein FliR
D DK63_3078 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DK63_2142 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DK63_2148 flagellar motor switch FliM family protein K02416 fliM; flagellar motor switch protein FliM
D DK63_2145 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DK63_3093 hypothetical protein K02409 fliF; flagellar M-ring protein FliF
D DK63_3094 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DK63_2174 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D DK63_2173 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DK63_2176 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D DK63_2177 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D DK63_2171 flagellar hook-basal body complex FliE family protein K02408 fliE; flagellar hook-basal body complex protein FliE
D DK63_2169 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DK63_2170 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DK63_3081 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DK63_2151 flagellar hook-basal body family protein K02391 flgF; flagellar basal-body rod protein FlgF
D DK63_2172 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DK63_3075 rod binding family protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D DK63_3086 flgE; flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D DK63_3085 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DK63_3084 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D DK63_3095 fliC; flagellin K02406 fliC; flagellin
D DK63_2149 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DK63_1110 ompA family protein K02557 motB; chemotaxis protein MotB
D DK63_3091 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB
D DK63_3090 putative chemotaxis motc protein K10564 motC; chemotaxis protein MotC
D DK63_3089 flagellar hook-length control FliK family protein K10565 motD; chemotaxis protein MotD
D DK63_2645 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DK63_3083 flagellar FlaF family protein K06602 flaF; flagellar biosynthesis activator protein FlaF
D DK63_3082 flagellar FlbT family protein K06601 flbT; flagellar biosynthesis repressor protein FlbT
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bmel04812]
D DK63_841 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DK63_842 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DK63_2324 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D DK63_2325 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DK63_2326 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D DK63_1423 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DK63_3151 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein
D DK63_1422 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DK63_3152 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bmel04147]
D DK63_569 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DK63_1123 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DK63_1124 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DK63_1141 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DK63_2621 dipeptidase AC, Metallo peptidase, MEROPS family M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D DK63_2209 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DK63_1489 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DK63_1855 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DK63_2352 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DK63_681 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DK63_667 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DK63_603 hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DK63_500 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D DK63_1860 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DK63_2430 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1158 phbA; acetyl-CoA acetyltransferase domain protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_2747 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DK63_1463 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DK63_644 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DK63_180 AAA domain protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DK63_946 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DK63_1346 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DK63_1618 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DK63_1847 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D DK63_2817 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DK63_2692 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_2720 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_442 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DK63_213 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DK63_1625 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DK63_633 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DK63_1085 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_2435 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DK63_1198 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DK63_563 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1290 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_2501 lpdV; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DK63_1335 electron transfer flavodomain protein K03522 fixB; electron transfer flavoprotein alpha subunit
D DK63_2730 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DK63_574 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DK63_2993 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bmel02048]
D DK63_2792 hsdR; type I site-specific deoxyribonuclease, HsdR family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DK63_2791 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DK63_2790 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DK63_2043 DNA methylase family protein K13581 ccrM; modification methylase [EC:2.1.1.72]
D DK63_3017 pemK-like family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D DK63_25 death-on-curing family protein K07341 doc; death on curing protein
D DK63_841 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DK63_210 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DK63_2566 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DK63_583 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_454 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DK63_2554 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D DK63_372 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bmel01504]
D DK63_2552 fosX; fosfomycin resistance protein fosX K21252 fosX; fosfomycin resistance protein FosX
D DK63_2559 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D DK63_529 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_2337 bepF; efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_1862 bepD; efflux pump periplasmic linker BepD K03585 acrA; membrane fusion protein, multidrug efflux system
D DK63_528 acrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D DK63_1863 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D DK63_2336 bepG; efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D DK63_1756 hmrR; HTH-type transcriptional regulator hmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D DK63_386 bepC; outer membrane efflux protein BepC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bmel00537]
D DK63_633 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DK63_2621 dipeptidase AC, Metallo peptidase, MEROPS family M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bmel03100]
D DK63_1040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_3063 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_1237 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_1570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_1356 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DK63_177 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_1842 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_403 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_1401 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DK63_2598 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DK63_2328 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DK63_253 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DK63_2591 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DK63_2064 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DK63_1018 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DK63_1055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DK63_705 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DK63_682 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_2838 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_2963 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DK63_1005 tRNA-His K14226 tRNA-His; tRNA His
D DK63_1041 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DK63_3064 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DK63_1238 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DK63_344 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_486 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_1316 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_2994 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_515 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DK63_760 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DK63_2561 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DK63_889 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1003 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1037 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1234 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_3060 tRNA-Met K14230 tRNA-Met; tRNA Met
D DK63_1816 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DK63_175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DK63_233 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DK63_1732 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DK63_99 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_1230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_2533 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_3014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DK63_1826 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DK63_379 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DK63_2782 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DK63_680 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DK63_683 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DK63_3195 tRNA-Val K14237 tRNA-Val; tRNA Val
D DK63_252 tRNA-Val K14237 tRNA-Val; tRNA Val
D DK63_402 tRNA-Val K14237 tRNA-Val; tRNA Val
D DK63_1042 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_3065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_1239 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DK63_1039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_1236 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_3062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DK63_1038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_3061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DK63_1235 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DK63_1414 afr; 1,5-anhydro-D-fructose reductase K19181 afr; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [EC:1.1.1.292]
D DK63_2198 aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D DK63_2810 FAD dependent oxidoreductase family protein K21054 eryB; D-erythritol 1-phosphate dehydrogenase [EC:1.1.1.402]
D DK63_2164 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D DK63_2168 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D DK63_83 pyridine nucleotide-disulfide oxidoreductase family protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D DK63_2372 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DK63_2545 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DK63_2353 cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D DK63_3012 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DK63_2429 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DK63_88 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D DK63_968 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D DK63_2935 oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D DK63_366 redoxin family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DK63_2828 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D DK63_2669 ahpD; alkylhydroperoxidase, AhpD family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D DK63_2670 redoxin family protein K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D DK63_959 aspartyl/Asparaginyl beta-hydroxylase family protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58]
D DK63_2666 cueO; blue copper oxidase CueO K14588 cueO; cuproxidase [EC:1.16.3.4]
D DK63_1899 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DK63_429 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D DK63_333 L-isoaspartate family protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DK63_385 L-isoaspartate family protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DK63_2006 methyltransferase domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D DK63_869 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D DK63_1518 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DK63_1513 acyltransferase family protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D DK63_957 acetyltransferase family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D DK63_1051 acetyltransferase domain protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D DK63_350 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D DK63_211 hypothetical protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D DK63_1687 acetyltransferase domain protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D DK63_934 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DK63_2246 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DK63_2288 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DK63_2809 hypothetical protein K00862 eryA; erythritol kinase (D-erythritol 1-phosphate-forming) [EC:2.7.1.215]
D DK63_2167 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D DK63_1434 kinase/pyrophosphorylase family protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D DK63_76 glutamate-ammonia ligase adenylyltransferase family protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D DK63_1099 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DK63_472 histidine phosphatase super family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DK63_2346 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D DK63_3135 type I phosphodiesterase / nucleotide pyrophosphatase family protein K01133 betC; choline-sulfatase [EC:3.1.6.6]
D DK63_435 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DK63_2593 denV; endonuclease V K01161 E3.1.25.1; deoxyribonuclease (pyrimidine dimer) [EC:3.1.25.1]
D DK63_606 D-alanyl-D-alanine carboxypeptidase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D DK63_1397 D-alanyl-D-alanine carboxypeptidase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D DK63_508 D-alanyl-D-alanine carboxypeptidase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D DK63_509 D-alanyl-D-alanine carboxypeptidase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D DK63_859 N-acetylmuramoyl-L-alanine amidase family protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DK63_2436 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DK63_2978 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DK63_3043 penicillin amidase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D DK63_1251 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D DK63_2706 rutC family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DK63_963 AAA domain family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DK63_295 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D DK63_753 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D DK63_2163 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D DK63_2757 hypothetical protein K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D DK63_444 yjeF-related family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DK63_2392 mutarotase, YjhT family protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D DK63_762 rbsD / FucU transport family protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D DK63_1776 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D DK63_2811 putative d-erythrulose 4-phosphate dehydrogenase K21909 eryC; D-erythrulose 1-phosphate 3-epimerase [EC:5.1.3.38]
D DK63_534 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D DK63_2814 triosephosphate isomerase family protein K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33]
D DK63_2815 sugar-phosphate isomerase, RpiB/LacA/LacB family protein K21911 eryI; D-erythrulose 4-phosphate isomerase [EC:5.3.1.34]
D DK63_2166 xylose isomerase-like TIM barrel family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D DK63_1923 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D DK63_1381 copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D DK63_3189 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D DK63_707 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D DK63_1494 calcium-binding protein, regucalcin K22217 K22217; sugar lactone lactonase
C 99982 Energy metabolism
D DK63_2657 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D DK63_462 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D DK63_1155 4Fe-4S binding domain protein K05524 fdxA; ferredoxin
D DK63_2260 von Willebrand factor type A domain protein K02448 norD; nitric oxide reductase NorD protein
D DK63_2255 cytochrome c oxidase subunit III family protein K02164 norE; nitric oxide reductase NorE protein
D DK63_2256 prokaryotic Cytochrome C oxidase subunit IV family protein K04747 norF; nitric oxide reductase NorF protein
D DK63_2259 AAA domain family protein K04748 norQ; nitric oxide reductase NorQ protein
D DK63_1336 electron transfer flavodomain protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D DK63_2571 hypothetical protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D DK63_2321 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D DK63_1705 etoposide-induced 2.4 family protein K06203 cysZ; CysZ protein
D DK63_1190 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DK63_752 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D DK63_1004 glycosyltransferase 25 family protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D DK63_734 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D DK63_1257 tetratricopeptide repeat family protein K02498 hemY; HemY protein
D DK63_3007 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D DK63_2298 SCP-2 sterol transfer family protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D DK63_560 polyketide cyclase / dehydrase and lipid transport family protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D DK63_2206 yqjF; inner membrane protein yqjF K15977 K15977; putative oxidoreductase
D DK63_2934 hypothetical protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DK63_905 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DK63_1979 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DK63_695 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DK63_2847 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
D DK63_775 ccmA; heme ABC exporter, ATP-binding protein CcmA K13926 rbbA; ribosome-dependent ATPase
D DK63_774 ABC-2 type transporter family protein K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D DK63_605 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DK63_345 tig; trigger factor K03545 tig; trigger factor
D DK63_2936 ferric reductase like transmembrane component family protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D DK63_1839 ureE1; urease accessory protein ureE 1 K03187 ureE; urease accessory protein
D DK63_781 hypothetical protein K03187 ureE; urease accessory protein
D DK63_1840 ureF family protein K03188 ureF; urease accessory protein
D DK63_782 ureF family protein K03188 ureF; urease accessory protein
D DK63_1841 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D DK63_783 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D DK63_1834 ureD urease accessory family protein K03190 ureD; urease accessory protein
D DK63_784 ureD urease accessory family protein K03190 ureD; urease accessory protein
D DK63_105 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D DK63_2320 nrdH; glutaredoxin-like NrdH family protein K06191 nrdH; glutaredoxin-like protein NrdH
D DK63_2980 hypothetical protein K07401 K07401; selenoprotein W-related protein
D DK63_1917 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D DK63_709 DNA repair RadC family protein K03630 radC; DNA repair protein RadC
D DK63_2979 rmuC family protein K09760 rmuC; DNA recombination protein RmuC
D DK63_1716 hypothetical protein K07460 yraN; putative endonuclease
D DK63_2981 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D DK63_2576 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D DK63_638 sigma-54 interaction domain protein K07478 ycaJ; putative ATPase
D DK63_5 transposase family protein K07483 K07483; transposase
D DK63_2531 transposase family protein K07483 K07483; transposase
D DK63_2530 putative transposase K07484 K07484; transposase
D DK63_2529 transposase IS66 family protein K07484 K07484; transposase
D DK63_2 hypothetical protein K07492 K07492; putative transposase
D DK63_6 transposase DDE domain protein K07492 K07492; putative transposase
D DK63_1674 hypothetical protein K07492 K07492; putative transposase
D DK63_2065 transposase DDE domain protein K07492 K07492; putative transposase
D DK63_2076 transposase DDE domain protein K07492 K07492; putative transposase
D DK63_2079 hypothetical protein K07492 K07492; putative transposase
D DK63_2525 hypothetical protein K07492 K07492; putative transposase
D DK63_362 hypothetical protein K07492 K07492; putative transposase
D DK63_419 hypothetical protein K07492 K07492; putative transposase
D DK63_247 hypothetical protein K07492 K07492; putative transposase
D DK63_2796 hypothetical protein K07492 K07492; putative transposase
D DK63_184 integrase core domain protein K07497 K07497; putative transposase
D DK63_3059 integrase core domain protein K07497 K07497; putative transposase
D DK63_2161 transposase family protein K07497 K07497; putative transposase
D DK63_3015 integrase core domain protein K07497 K07497; putative transposase
D DK63_4 integrase core domain protein K07497 K07497; putative transposase
D DK63_2067 integrase core domain protein K07497 K07497; putative transposase
D DK63_2068 putative transposase K07497 K07497; putative transposase
D DK63_2069 integrase core domain protein K07497 K07497; putative transposase
D DK63_1231 transposase IS66 family protein K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D DK63_1580 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DK63_1846 acrB/AcrD/AcrF family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D DK63_2768 MMPL family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D DK63_2464 agcS; amino acid carrier family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DK63_1087 sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D DK63_1280 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D DK63_1304 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D DK63_1217 peptidase M23 family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D DK63_2820 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D DK63_1515 phoH-like family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D DK63_862 glycosyl hydrolases 25 family protein K07273 acm; lysozyme
D DK63_2465 glycosyl hydrolases 25 family protein K07273 acm; lysozyme
D DK63_969 hypothetical protein K07275 ompW; outer membrane protein
D DK63_1007 asmA family protein K07289 asmA; AsmA protein
D DK63_2099 hypothetical protein K07340 ybbJ; inner membrane protein
D DK63_2444 efflux transporter, RND family, MFP subunit K01993 ABC-2.TX; HlyD family secretion protein
D DK63_776 efflux transporter, RND family, MFP subunit K01993 ABC-2.TX; HlyD family secretion protein
D DK63_70 ccmE family protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D DK63_69 ccmI; cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D DK63_72 cytochrome C biogenesis family protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D DK63_1505 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D DK63_1873 hypothetical protein K06195 apaG; ApaG protein
D DK63_2283 nosD; nitrous oxide reductase maturation NosD family protein K07218 nosD; nitrous oxidase accessory protein
D DK63_2292 nnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D DK63_2286 nosL; nosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DK63_2003 colicin V production family protein K03558 cvpA; membrane protein required for colicin V production
D DK63_1668 acetyltransferase family protein K02348 elaA; ElaA protein
D DK63_931 csaA; export-related chaperone CsaA family protein K06878 K06878; tRNA-binding protein
D DK63_2840 putative sEC-independent translocase protein TatC K06886 glbN; hemoglobin
D DK63_2221 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DK63_514 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DK63_3116 HAD hydrolase, IA, variant 3 family protein K07025 K07025; putative hydrolase of the HAD superfamily
D DK63_2970 HAD hydrolase, IA, variant 3 family protein K07025 K07025; putative hydrolase of the HAD superfamily
D DK63_373 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D DK63_375 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D DK63_1343 virulence factor BrkB family protein K07058 K07058; membrane protein
D DK63_1440 fxsA cytoplasmic membrane family protein K07113 fxsA; UPF0716 protein FxsA
D DK63_44 fe-S metabolism associated domain protein K02426 sufE; cysteine desulfuration protein SufE
D DK63_2111 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D DK63_1203 lemA family protein K03744 lemA; LemA protein
D DK63_3011 slyX family protein K03745 slyX; SlyX protein
D DK63_831 creA family protein K05805 creA; CreA protein
D DK63_1201 TLP18.3, Psb32 and MOLO-1 founding s of phosphatase family protein K08988 K08988; putative membrane protein
D DK63_470 hypothetical protein K08990 ycjF; putative membrane protein
D DK63_150 type III secretion system lipochaperone family protein K09914 K09914; putative lipoprotein
D DK63_878 phnA family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D DK63_1202 TLP18.3, Psb32 and MOLO-1 founding s of phosphatase family protein K06872 K06872; uncharacterized protein
D DK63_1428 hypothetical protein K06888 K06888; uncharacterized protein
D DK63_1604 prolyl oligopeptidase family protein K06889 K06889; uncharacterized protein
D DK63_1631 inhibitor of apoptosis-promoting Bax1 family protein K06890 K06890; uncharacterized protein
D DK63_471 hypothetical protein K06918 K06918; uncharacterized protein
D DK63_335 ATPase associated with various cellular activities family protein K06923 K06923; uncharacterized protein
D DK63_2777 hypothetical protein K06953 K06953; uncharacterized protein
D DK63_996 GCN5-related N-acetyl-transferase family protein K06975 K06975; uncharacterized protein
D DK63_1856 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D DK63_2051 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K06996 K06996; uncharacterized protein
D DK63_2462 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K06996 K06996; uncharacterized protein
D DK63_795 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D DK63_371 dienelactone hydrolase family protein K07018 K07018; uncharacterized protein
D DK63_2527 yecA family protein K07039 K07039; uncharacterized protein
D DK63_899 neutral zinc metallopeptidase family protein K07054 K07054; uncharacterized protein
D DK63_2636 FAD binding domain protein K07077 K07077; uncharacterized protein
D DK63_2475 nitroreductase family protein K07078 K07078; uncharacterized protein
D DK63_627 TRAP transporter solute receptor, TAXI family protein K07080 K07080; uncharacterized protein
D DK63_2775 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DK63_3128 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DK63_2635 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DK63_731 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DK63_2439 sulfur transport family protein K07112 K07112; uncharacterized protein
D DK63_2440 sulfur transport family protein K07112 K07112; uncharacterized protein
D DK63_1106 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DK63_91 putative cytoplasmic protein K07126 K07126; uncharacterized protein
D DK63_2835 ATP-dependent protease La domain protein K07157 K07157; uncharacterized protein
D DK63_510 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D DK63_694 hypothetical protein K09005 K09005; uncharacterized protein
D DK63_897 yqey-like family protein K09117 K09117; uncharacterized protein
D DK63_2772 hypothetical protein K09137 K09137; uncharacterized protein
D DK63_892 putative zinc-/iron-chelating domain protein K09160 K09160; uncharacterized protein
D DK63_1854 polyketide cyclase / dehydrase and lipid transport family protein K09386 K09386; uncharacterized protein
D DK63_1116 hypothetical protein K09706 K09706; uncharacterized protein
D DK63_1344 hypothetical protein K09768 K09768; uncharacterized protein
D DK63_1263 YCII-related domain protein K09780 K09780; uncharacterized protein
D DK63_2437 hypothetical protein K09781 K09781; uncharacterized protein
D DK63_1500 hypothetical protein K09790 K09790; uncharacterized protein
D DK63_2834 trm112p-like family protein K09791 K09791; uncharacterized protein
D DK63_2190 hypothetical protein K09794 K09794; uncharacterized protein
D DK63_2082 hypothetical protein K09795 K09795; uncharacterized protein
D DK63_879 integral membrane TerC family protein K09799 K09799; uncharacterized protein
D DK63_417 hypothetical protein K09803 K09803; uncharacterized protein
D DK63_890 bp26; 26 kDa periplasmic immunogenic protein K09807 K09807; uncharacterized protein
D DK63_1817 hypothetical protein K09862 K09862; uncharacterized protein
D DK63_602 acetyltransferase domain protein K09919 K09919; uncharacterized protein
D DK63_918 hypothetical protein K09922 K09922; uncharacterized protein
D DK63_448 hypothetical protein K09924 K09924; uncharacterized protein
D DK63_115 hypothetical protein K09928 K09928; uncharacterized protein
D DK63_813 hypothetical protein K09937 K09937; uncharacterized protein
D DK63_706 hypothetical protein K09956 K09956; uncharacterized protein
D DK63_1740 hypothetical protein K09959 K09959; uncharacterized protein
D DK63_1289 traB family protein K09973 K09973; uncharacterized protein
D DK63_2875 hutD family protein K09975 K09975; uncharacterized protein
D DK63_821 hypothetical protein K09985 K09985; uncharacterized protein
D DK63_962 hypothetical protein K09986 K09986; uncharacterized protein
D DK63_1131 hypothetical protein K09987 K09987; uncharacterized protein
D DK63_387 hypothetical protein K09991 K09991; uncharacterized protein
D DK63_1524 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 6, 2024