+D GENES KO
#
KEGG Orthology (KO) - Borrelia miyamotoi CT14D4
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bmiy00010]
D RJ61_03600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_00095 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RJ61_02165 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RJ61_00260 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RJ61_00270 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RJ61_00265 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RJ61_03225 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RJ61_01635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RJ61_01690 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RJ61_00415 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RJ61_02745 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RJ61_03160 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00560 PTS mannose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway [PATH:bmiy00030]
D RJ61_03600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RJ61_03115 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RJ61_01070 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RJ61_02755 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RJ61_03220 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RJ61_02670 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RJ61_02165 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_00095 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions
D RJ61_00990 nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:bmiy00051]
D RJ61_04140 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_00095 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RJ61_03085 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RJ61_02165 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RJ61_00260 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RJ61_03080 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:bmiy00052]
D RJ61_00990 nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D RJ61_02160 capsule biosynthesis protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:bmiy00500]
D RJ61_00990 nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RJ61_00785 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RJ61_02745 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RJ61_03160 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00560 PTS mannose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RJ61_03600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bmiy00520]
D RJ61_03025 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RJ61_00005 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RJ61_02745 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RJ61_04095 PTS sucrose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RJ61_00725 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RJ61_00730 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RJ61_02330 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RJ61_02910 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RJ61_03155 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D RJ61_03160 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00560 PTS mannose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RJ61_00990 nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RJ61_02160 capsule biosynthesis protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RJ61_03600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RJ61_04140 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:bmiy00620]
D RJ61_03040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RJ61_02865 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RJ61_01690 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RJ61_00415 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bmiy00630]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_03315 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RJ61_02925 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism [PATH:bmiy00640]
D RJ61_03040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RJ61_02865 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RJ61_00415 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:bmiy00650]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_03350 3-hydroxy-3-methylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D RJ61_00260 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bmiy00190]
D RJ61_00450 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RJ61_00445 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RJ61_00440 ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RJ61_00460 ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RJ61_00435 ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RJ61_00430 ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bmiy00710]
D RJ61_00265 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RJ61_00270 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RJ61_02165 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RJ61_03220 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RJ61_00260 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00720 Other carbon fixation pathways [PATH:bmiy00720]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_00125 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RJ61_02865 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RJ61_03040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:bmiy00680]
D RJ61_02925 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RJ61_01635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RJ61_02165 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_03040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RJ61_02865 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RJ61_03225 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism
D RJ61_04180 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D RJ61_03020 delta(24)-sterol C-methyltransferase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bmiy00061]
D RJ61_03460 acyl carrier protein K02078 acpP; acyl carrier protein
D RJ61_00670 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_02885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bmiy00071]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_00670 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_02885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bmiy00561]
D RJ61_01160 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RJ61_01595 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RJ61_00180 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RJ61_02215 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:bmiy00564]
D RJ61_01770 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RJ61_01175 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RJ61_01595 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RJ61_00180 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RJ61_01170 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RJ61_00575 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RJ61_01205 phosphatidyltransferase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D RJ61_03555 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bmiy00230]
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RJ61_02670 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RJ61_02045 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RJ61_03850 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RJ61_02305 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RJ61_02035 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RJ61_02280 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RJ61_01195 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RJ61_00935 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RJ61_03565 adenylyl cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D RJ61_02040 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RJ61_02485 phosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RJ61_02000 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RJ61_04180 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:bmiy00240]
D RJ61_02810 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RJ61_02280 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RJ61_02820 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RJ61_00625 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RJ61_04060 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RJ61_00070 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RJ61_02485 phosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RJ61_03015 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RJ61_03935 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RJ61_03925 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bmiy00250]
D RJ61_02040 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RJ61_02045 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:bmiy00260]
D RJ61_02925 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RJ61_03225 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00270 Cysteine and methionine metabolism [PATH:bmiy00270]
D RJ61_01810 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RJ61_01805 5'-nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RJ61_02305 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RJ61_01815 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RJ61_00415 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:bmiy00280]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_03350 3-hydroxy-3-methylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:bmiy00300]
D RJ61_02800 Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RJ61_00950 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RJ61_01490 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:bmiy00220]
D RJ61_04170 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RJ61_04165 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D RJ61_04180 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:bmiy00430]
D RJ61_02865 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RJ61_03040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D RJ61_02595 PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:bmiy00450]
D RJ61_00400 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RJ61_02530 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RJ61_02860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D RJ61_02925 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bmiy00470]
D RJ61_00760 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RJ61_00945 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RJ61_00480 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RJ61_02850 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:bmiy00480]
D RJ61_02955 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RJ61_02755 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RJ61_03115 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RJ61_02555 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bmiy00541]
D RJ61_00990 nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RJ61_02160 capsule biosynthesis protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RJ61_04140 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00550 Peptidoglycan biosynthesis [PATH:bmiy00550]
D RJ61_02330 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RJ61_02910 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RJ61_04050 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RJ61_02850 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RJ61_00950 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RJ61_00945 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RJ61_01490 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RJ61_00580 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RJ61_01260 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RJ61_01485 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RJ61_03795 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RJ61_03540 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RJ61_00665 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RJ61_02840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:bmiy00552]
D RJ61_01260 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RJ61_02215 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bmiy00730]
D RJ61_00475 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RJ61_02000 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:bmiy00760]
D RJ61_03110 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RJ61_03875 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RJ61_02560 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RJ61_01525 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bmiy00770]
D RJ61_02575 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RJ61_04030 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RJ61_03450 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RJ61_02685 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RJ61_00045 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate [PATH:bmiy00670]
D RJ61_00125 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RJ61_02925 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RJ61_00305 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D RJ61_01790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bmiy00900]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_03350 3-hydroxy-3-methylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D RJ61_03360 3-hydroxy-3-methylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D RJ61_03375 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D RJ61_03370 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D RJ61_03365 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D RJ61_03355 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RJ61_01540 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RJ61_00580 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D RJ61_00015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RJ61_03460 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D RJ61_01810 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bmiy03020]
D RJ61_01865 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RJ61_01860 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RJ61_02470 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bmiy03010]
D RJ61_00620 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RJ61_00595 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RJ61_02385 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RJ61_03000 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RJ61_02440 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RJ61_00555 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RJ61_01850 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RJ61_02425 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RJ61_01640 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RJ61_02350 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RJ61_02465 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RJ61_01855 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RJ61_02460 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RJ61_02420 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D RJ61_03990 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RJ61_03410 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RJ61_02400 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RJ61_00545 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RJ61_02375 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RJ61_01115 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RJ61_01250 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RJ61_01880 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RJ61_02370 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RJ61_02355 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RJ61_02360 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RJ61_02415 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RJ61_02430 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RJ61_01870 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RJ61_00540 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RJ61_01875 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RJ61_01885 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RJ61_01645 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RJ61_02405 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RJ61_02450 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RJ61_02390 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RJ61_02475 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RJ61_02435 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RJ61_03430 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RJ61_00890 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RJ61_03855 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RJ61_02380 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RJ61_02365 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RJ61_02410 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RJ61_03895 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RJ61_03865 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RJ61_01700 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RJ61_02395 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RJ61_02445 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RJ61_01095 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D RJ61_03455 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RJ61_01905 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RJ61_02140 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RJ61_00895 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RJ61_02065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RJ61_02025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RJ61_02020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bmiy00970]
D RJ61_02060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RJ61_02255 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RJ61_02965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RJ61_03680 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RJ61_03060 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RJ61_03090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RJ61_00955 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RJ61_03890 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RJ61_02975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RJ61_00230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RJ61_02960 tRNA-His K14226 tRNA-His; tRNA His
D RJ61_02055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RJ61_02805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_01215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_02970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_03755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_02620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RJ61_02625 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RJ61_03030 tRNA-Met K14230 tRNA-Met; tRNA Met
D RJ61_03005 tRNA-Met K14230 tRNA-Met; tRNA Met
D RJ61_01020 tRNA-Met K14230 tRNA-Met; tRNA Met
D RJ61_00975 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RJ61_03675 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RJ61_02240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RJ61_02245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RJ61_02260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RJ61_01910 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RJ61_03485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RJ61_01900 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RJ61_03490 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RJ61_03380 tRNA-Val K14237 tRNA-Val; tRNA Val
D RJ61_01790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RJ61_01660 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RJ61_01655 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RJ61_01665 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RJ61_01060 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RJ61_02175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RJ61_00485 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RJ61_01785 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RJ61_03550 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RJ61_01080 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RJ61_02915 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RJ61_02860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RJ61_00305 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RJ61_01220 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RJ61_03230 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RJ61_02890 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RJ61_01940 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RJ61_00660 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RJ61_02520 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RJ61_02525 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RJ61_01780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RJ61_00020 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bmiy03060]
D RJ61_02455 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RJ61_01895 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RJ61_00255 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RJ61_03195 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RJ61_03200 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RJ61_03190 membrane protein K03210 yajC; preprotein translocase subunit YajC
D RJ61_02150 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RJ61_00740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RJ61_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RJ61_00365 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RJ61_00145 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RJ61_00150 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RJ61_01285 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RJ61_02315 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D RJ61_03345 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bmiy03018]
D RJ61_01635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RJ61_03995 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RJ61_01100 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RJ61_02480 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_02545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RJ61_01290 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D RJ61_03180 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bmiy03030]
D RJ61_02825 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RJ61_02265 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_03785 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_02220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RJ61_02125 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RJ61_00535 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RJ61_03505 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RJ61_00550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RJ61_00220 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RJ61_02690 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RJ61_02710 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bmiy03410]
D RJ61_03685 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RJ61_00250 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RJ61_02050 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RJ61_00060 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RJ61_02600 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RJ61_02690 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RJ61_01240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RJ61_02710 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bmiy03420]
D RJ61_03045 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RJ61_04150 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RJ61_04145 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RJ61_02225 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RJ61_01670 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RJ61_02690 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RJ61_02710 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bmiy03430]
D RJ61_03955 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RJ61_00470 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D RJ61_01010 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RJ61_01670 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RJ61_01240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RJ61_00550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RJ61_02825 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RJ61_02125 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RJ61_02265 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_03785 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_02220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RJ61_02710 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RJ61_02285 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:bmiy03440]
D RJ61_01240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RJ61_00550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RJ61_02130 DNA replication protein RecF K03629 recF; DNA replication and repair protein RecF
D RJ61_02275 recombinase RecR K06187 recR; recombination protein RecR
D RJ61_00640 recombinase RecA K03553 recA; recombination protein RecA
D RJ61_02690 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RJ61_00110 ruvA; ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RJ61_00105 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RJ61_00115 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RJ61_02835 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RJ61_03100 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RJ61_03105 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RJ61_03095 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RJ61_02825 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RJ61_02125 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RJ61_02265 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_03785 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_02220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RJ61_00065 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bmiy02010]
D RJ61_03130 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RJ61_03135 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RJ61_03140 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RJ61_03145 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RJ61_00700 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RJ61_00705 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D RJ61_00710 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RJ61_01835 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RJ61_01840 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RJ61_01845 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RJ61_03330 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RJ61_03320 ribose ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RJ61_01035 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RJ61_01040 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RJ61_01045 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RJ61_01050 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RJ61_01600 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01610 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D RJ61_01615 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RJ61_01620 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RJ61_01625 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RJ61_00375 permease K09808 lolC_E; lipoprotein-releasing system permease protein
D RJ61_00385 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D RJ61_00380 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RJ61_04005 membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D RJ61_04010 permease K11720 lptG; lipopolysaccharide export system permease protein
D RJ61_02300 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
C 02060 Phosphotransferase system (PTS) [PATH:bmiy02060]
D RJ61_02740 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RJ61_02735 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RJ61_02185 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RJ61_02745 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RJ61_04095 PTS sucrose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RJ61_03160 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00560 PTS mannose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_03080 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RJ61_03085 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:bmiy03070]
D RJ61_03195 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RJ61_03200 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RJ61_01895 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RJ61_00255 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RJ61_02455 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RJ61_03190 membrane protein K03210 yajC; preprotein translocase subunit YajC
D RJ61_02150 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RJ61_00740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RJ61_00365 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RJ61_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bmiy02020]
D RJ61_01035 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RJ61_00500 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_03920 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_00715 flaB; flagellin FlaB K02406 fliC; flagellin
D RJ61_01375 Motility protein A K02556 motA; chemotaxis protein MotA
D RJ61_02120 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RJ61_02840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RJ61_03780 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D RJ61_00870 carbon storage regulator K03563 csrA; carbon storage regulator
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_01935 glutamate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D RJ61_00195 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RJ61_01985 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RJ61_02900 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_02905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_03335 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_03340 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_02770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_01530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_03285 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_02780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_03280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_02705 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02795 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_03295 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02785 glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_01990 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_02015 histidine kinase K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
D RJ61_02010 diguanylate cyclase K18444 rrp1; two-component system, glycerol uptake and utilization response regulator
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bmiy02024]
D RJ61_01815 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RJ61_00670 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_02885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_01600 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01610 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D RJ61_01615 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RJ61_01620 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RJ61_01625 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RJ61_03695 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RJ61_03690 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RJ61_02150 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RJ61_01895 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RJ61_00255 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RJ61_02455 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RJ61_03190 membrane protein K03210 yajC; preprotein translocase subunit YajC
D RJ61_00740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RJ61_00365 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RJ61_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bmiy02030]
D RJ61_02900 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_02905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_03335 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_03340 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_02780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_03280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_02770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_01530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_03285 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_02705 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02795 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_03295 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_03290 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D RJ61_02785 glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_01990 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_02950 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RJ61_00195 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RJ61_01985 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RJ61_01420 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RJ61_01065 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RJ61_01360 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RJ61_01355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RJ61_01375 Motility protein A K02556 motA; chemotaxis protein MotA
D RJ61_01370 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bmiy02040]
D RJ61_01430 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RJ61_01425 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RJ61_01420 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RJ61_01065 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RJ61_01415 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RJ61_01410 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RJ61_01365 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RJ61_01360 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RJ61_01355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RJ61_01350 flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D RJ61_01345 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D RJ61_01340 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RJ61_01335 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RJ61_01325 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RJ61_01330 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RJ61_01440 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RJ61_01435 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RJ61_01390 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RJ61_01385 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RJ61_03840 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D RJ61_03835 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RJ61_03825 flgI; flagellar basal body P-ring biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI
D RJ61_03820 muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RJ61_00855 flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RJ61_00860 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RJ61_00715 flaB; flagellin FlaB K02406 fliC; flagellin
D RJ61_00720 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D RJ61_02700 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RJ61_01375 Motility protein A K02556 motA; chemotaxis protein MotA
D RJ61_01370 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RJ61_03510 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RJ61_01635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bmiy01501]
D RJ61_03025 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RJ61_00005 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RJ61_01600 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01610 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D RJ61_01615 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RJ61_01620 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RJ61_01625 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RJ61_03540 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RJ61_00665 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bmiy01502]
D RJ61_00945 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RJ61_00760 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RJ61_01490 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RJ61_01485 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RJ61_03795 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RJ61_02840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bmiy01503]
D RJ61_03265 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RJ61_03055 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RJ61_00500 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_03920 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bmiy01000]
C 01001 Protein kinases [BR:bmiy01001]
D RJ61_03780 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D RJ61_02780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_03280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_02015 histidine kinase K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bmiy01009]
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_02750 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:bmiy01002]
D RJ61_02315 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RJ61_03035 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RJ61_02880 CAAX protease K07052 K07052; CAAX protease family protein
D RJ61_01200 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RJ61_02840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RJ61_01090 hypothetical protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D RJ61_02610 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D RJ61_02800 Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RJ61_02955 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RJ61_00505 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RJ61_00320 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RJ61_00330 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D RJ61_03910 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RJ61_00570 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RJ61_00500 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_03920 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_02985 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RJ61_03745 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RJ61_01230 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RJ61_02995 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RJ61_00145 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RJ61_00150 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RJ61_01285 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RJ61_01740 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RJ61_01450 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RJ61_00970 membane protease HflC K04087 hflC; modulator of FtsH protease HflC
D RJ61_00965 membrane protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bmiy01003]
D RJ61_02215 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmiy01011]
D RJ61_02330 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RJ61_02910 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RJ61_04050 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RJ61_02850 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RJ61_00950 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RJ61_00945 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RJ61_00760 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RJ61_00480 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RJ61_01485 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RJ61_03795 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RJ61_01260 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RJ61_04020 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RJ61_03540 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RJ61_00665 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RJ61_02840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RJ61_01265 transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RJ61_03500 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RJ61_03630 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RJ61_03265 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RJ61_03055 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bmiy01004]
D RJ61_00670 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_02885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_01595 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RJ61_00180 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bmiy01006]
D RJ61_01540 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RJ61_00580 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RJ61_04070 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:bmiy01007]
D RJ61_03230 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RJ61_01790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RJ61_01780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RJ61_00020 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RJ61_02915 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RJ61_02890 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RJ61_02860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RJ61_01220 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RJ61_02175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RJ61_00485 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RJ61_00660 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RJ61_01785 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RJ61_01080 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RJ61_01940 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RJ61_03550 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RJ61_01060 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RJ61_02520 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RJ61_02525 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bmiy03000]
D RJ61_03170 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D RJ61_03605 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RJ61_02105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RJ61_01725 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RJ61_00795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:bmiy03021]
D RJ61_02470 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RJ61_01865 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RJ61_01860 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RJ61_03510 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RJ61_03815 RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RJ61_03970 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RJ61_00515 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RJ61_01890 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RJ61_00795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D RJ61_01100 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bmiy03019]
D RJ61_03465 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RJ61_02480 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RJ61_01635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RJ61_03995 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RJ61_01100 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RJ61_03585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RJ61_02545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RJ61_01290 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D RJ61_03180 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RJ61_00870 carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome [BR:bmiy03041]
C 03011 Ribosome [BR:bmiy03011]
D RJ61_00620 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RJ61_00595 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RJ61_02385 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RJ61_03000 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RJ61_02440 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RJ61_00555 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RJ61_01850 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RJ61_02425 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RJ61_01640 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RJ61_02350 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RJ61_02465 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RJ61_01855 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RJ61_02460 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RJ61_02420 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D RJ61_03990 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RJ61_03410 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RJ61_02400 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RJ61_00545 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RJ61_02375 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RJ61_01115 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RJ61_01250 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RJ61_01880 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RJ61_02370 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RJ61_02355 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RJ61_02360 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RJ61_02415 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RJ61_02430 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RJ61_00540 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RJ61_01875 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RJ61_01885 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RJ61_01870 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RJ61_01645 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RJ61_02405 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RJ61_02450 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RJ61_02390 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RJ61_02475 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RJ61_02435 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RJ61_03430 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RJ61_00890 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RJ61_03855 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RJ61_02380 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RJ61_02365 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RJ61_02410 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RJ61_03865 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RJ61_01700 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RJ61_02395 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RJ61_02445 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RJ61_01095 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D RJ61_03455 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RJ61_01905 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RJ61_02140 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RJ61_00895 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RJ61_03895 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RJ61_02020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RJ61_02065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RJ61_02025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bmiy03009]
D RJ61_03465 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RJ61_03235 GTPase Era K03595 era; GTPase
D RJ61_03870 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RJ61_00795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D RJ61_03970 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RJ61_00515 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RJ61_01890 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RJ61_02870 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RJ61_00985 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RJ61_01735 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RJ61_00295 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RJ61_01500 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RJ61_02075 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RJ61_02490 50S rRNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RJ61_02535 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RJ61_01535 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RJ61_00630 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RJ61_04040 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RJ61_00085 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RJ61_03420 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RJ61_00475 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RJ61_02500 GTP-binding protein Der K03977 engA; GTPase
D RJ61_03150 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D RJ61_03625 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RJ61_00935 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RJ61_03980 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RJ61_00285 heat-shock protein K07042 ybeY; probable rRNA maturation factor
D RJ61_01125 GTP-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bmiy03016]
D RJ61_03735 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RJ61_03470 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RJ61_01790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RJ61_01940 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RJ61_01220 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RJ61_02860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RJ61_02890 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RJ61_02175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RJ61_01060 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RJ61_00485 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RJ61_01785 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RJ61_03550 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RJ61_01080 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RJ61_02915 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RJ61_00660 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RJ61_02520 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RJ61_02525 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RJ61_01780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RJ61_00020 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RJ61_01820 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RJ61_00055 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RJ61_03985 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RJ61_03625 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RJ61_04070 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RJ61_00845 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RJ61_00840 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RJ61_02145 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RJ61_04185 bacterial RNase P K01978 rnpB; M1 RNA
D RJ61_03230 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RJ61_03425 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RJ61_00245 rRNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D RJ61_03345 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RJ61_00100 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RJ61_04015 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RJ61_03905 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RJ61_00875 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RJ61_03805 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RJ61_00880 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RJ61_03995 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bmiy03012]
D RJ61_03975 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RJ61_00900 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RJ61_00590 elongation factor Ts K02357 tsf; elongation factor Ts
D RJ61_02345 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RJ61_02645 fusA; elongation factor G K02355 fusA; elongation factor G
D RJ61_03395 elongation factor G K02355 fusA; elongation factor G
D RJ61_00925 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RJ61_00585 ribosome recycling factor K02838 frr; ribosome recycling factor
D RJ61_00930 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RJ61_03900 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RJ61_00800 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RJ61_01030 elongation factor P K02356 efp; elongation factor P
D RJ61_00355 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bmiy03110]
D RJ61_01775 Clp protease ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RJ61_04135 ATPase AAA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RJ61_02990 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RJ61_01445 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RJ61_02750 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RJ61_02545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RJ61_01290 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D RJ61_03180 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RJ61_02540 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RJ61_03210 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D RJ61_02550 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D RJ61_02170 heat-shock protein K13993 HSP20; HSP20 family protein
D RJ61_03655 molecular chaperone GroES K04078 groES; chaperonin GroES
D RJ61_00500 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_03920 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RJ61_03910 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RJ61_00290 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:bmiy04131]
D RJ61_02280 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RJ61_00270 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RJ61_03225 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RJ61_01690 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RJ61_02750 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:bmiy03051]
D RJ61_02750 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bmiy03032]
D RJ61_01110 integration host factor K05788 ihfB; integration host factor subunit beta
D RJ61_02120 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RJ61_00535 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RJ61_03505 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RJ61_00550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RJ61_02825 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RJ61_02125 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RJ61_02220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RJ61_02265 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_03785 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_00220 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RJ61_02690 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RJ61_02710 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RJ61_02285 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RJ61_02110 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RJ61_02115 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RJ61_00170 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RJ61_00175 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RJ61_04105 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bmiy03036]
D RJ61_03465 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RJ61_01110 integration host factor K05788 ihfB; integration host factor subunit beta
D RJ61_03210 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D RJ61_02120 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RJ61_00215 hypothetical protein K03529 smc; chromosome segregation protein
D RJ61_01470 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RJ61_00665 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RJ61_01255 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RJ61_01475 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RJ61_01480 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RJ61_01465 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RJ61_03265 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RJ61_03055 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RJ61_03525 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RJ61_03530 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RJ61_03545 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RJ61_03605 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RJ61_02105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RJ61_00170 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RJ61_00175 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RJ61_00840 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
C 03400 DNA repair and recombination proteins [BR:bmiy03400]
D RJ61_00250 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RJ61_02050 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RJ61_03685 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RJ61_00060 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RJ61_02600 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RJ61_01240 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RJ61_02710 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RJ61_02690 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RJ61_04150 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RJ61_04145 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RJ61_02225 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RJ61_01670 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RJ61_01865 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RJ61_01860 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RJ61_02470 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RJ61_03045 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RJ61_03955 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RJ61_00470 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D RJ61_01010 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RJ61_02825 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RJ61_02125 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RJ61_02220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RJ61_02265 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_03785 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RJ61_00550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RJ61_02285 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RJ61_03100 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RJ61_03105 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RJ61_03095 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RJ61_00640 recombinase RecA K03553 recA; recombination protein RecA
D RJ61_00110 ruvA; ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RJ61_00105 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RJ61_00115 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RJ61_00065 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RJ61_04115 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D RJ61_04110 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D RJ61_02070 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RJ61_02130 DNA replication protein RecF K03629 recF; DNA replication and repair protein RecF
D RJ61_02835 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RJ61_02275 recombinase RecR K06187 recR; recombination protein RecR
D RJ61_01520 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RJ61_02110 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RJ61_02115 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RJ61_04105 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RJ61_01110 integration host factor K05788 ihfB; integration host factor subunit beta
D RJ61_03635 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RJ61_03020 delta(24)-sterol C-methyltransferase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bmiy03029]
D RJ61_03975 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RJ61_00900 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RJ61_00590 elongation factor Ts K02357 tsf; elongation factor Ts
D RJ61_02345 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RJ61_02645 fusA; elongation factor G K02355 fusA; elongation factor G
D RJ61_03395 elongation factor G K02355 fusA; elongation factor G
D RJ61_03235 GTPase Era K03595 era; GTPase
D RJ61_01780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RJ61_01220 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RJ61_02175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RJ61_01785 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RJ61_02890 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RJ61_01660 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RJ61_01655 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RJ61_01665 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RJ61_00550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RJ61_03945 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RJ61_02545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RJ61_01290 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D RJ61_02550 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D RJ61_03180 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RJ61_03655 molecular chaperone GroES K04078 groES; chaperonin GroES
D RJ61_02540 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RJ61_02150 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RJ61_02750 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bmiy02000]
D RJ61_03130 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RJ61_03135 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RJ61_03140 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RJ61_03145 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RJ61_00700 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RJ61_00705 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D RJ61_00710 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RJ61_01835 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RJ61_01840 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RJ61_01845 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RJ61_03330 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RJ61_03320 ribose ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RJ61_01565 hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D RJ61_01555 membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein
D RJ61_01560 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RJ61_01035 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RJ61_01040 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RJ61_01045 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RJ61_01050 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RJ61_01600 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01605 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RJ61_01610 ABC transporter K15581 oppB; oligopeptide transport system permease protein
D RJ61_01615 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RJ61_01620 peptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RJ61_01625 peptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RJ61_03695 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RJ61_03690 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RJ61_04005 membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D RJ61_04010 permease K11720 lptG; lipopolysaccharide export system permease protein
D RJ61_02300 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RJ61_03725 membrane protein K25151 gldF; gliding motility-associated transport system permease protein
D RJ61_03730 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D RJ61_03720 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D RJ61_00375 permease K09808 lolC_E; lipoprotein-releasing system permease protein
D RJ61_00385 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D RJ61_00380 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RJ61_02335 membrane protein K26937 dinF; MATE family, multidrug efflux pump
D RJ61_02845 membrane protein K26937 dinF; MATE family, multidrug efflux pump
D RJ61_01165 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D RJ61_02740 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RJ61_02735 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RJ61_02185 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RJ61_02745 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RJ61_04095 PTS sucrose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RJ61_03160 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_00560 PTS mannose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RJ61_03080 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RJ61_01155 porin K02440 glpF; glycerol uptake facilitator
D RJ61_00815 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D RJ61_00820 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D RJ61_02210 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D RJ61_01825 magnesium transporter K06213 mgtE; magnesium transporter
D RJ61_01375 Motility protein A K02556 motA; chemotaxis protein MotA
D RJ61_01370 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RJ61_00960 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RJ61_03945 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RJ61_02295 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D RJ61_00280 hemolysin K06189 corC; hemolysin (HlyC) family protein
D RJ61_01055 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family
D RJ61_02940 lactate permease K03303 lutP; lactate permease
D RJ61_00775 sodium:proton exchanger K07301 yrbG; cation:H+ antiporter
D RJ61_04035 sodium:pantothenate symporter K14392 panF; sodium/pantothenate symporter
D RJ61_01935 glutamate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D RJ61_02180 sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D RJ61_03570 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D RJ61_03575 lectin K03499 trkA; trk/ktr system potassium uptake protein
D RJ61_02205 chromate transporter K07240 chrA; chromate transporter
D RJ61_04020 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RJ61_00235 membrane protein K09125 yhhQ; queuosine precursor transporter
D RJ61_01480 cell division protein FtsW K03588 ftsW; cell division protein FtsW
C 02044 Secretion system [BR:bmiy02044]
D RJ61_02830 membrane protein K02221 yggT; YggT family protein
D RJ61_02875 competence protein K02238 comEC; competence protein ComEC
D RJ61_03960 competence protein ComF K02242 comFC; competence protein ComFC
D RJ61_01325 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RJ61_01330 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RJ61_03440 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D RJ61_01425 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RJ61_01415 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RJ61_01410 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RJ61_01355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RJ61_01350 flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D RJ61_01345 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D RJ61_01340 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RJ61_01335 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RJ61_00740 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RJ61_03195 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RJ61_01895 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RJ61_03200 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RJ61_00255 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RJ61_02455 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RJ61_03405 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RJ61_00365 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RJ61_03190 membrane protein K03210 yajC; preprotein translocase subunit YajC
D RJ61_02150 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:bmiy02042]
D RJ61_00960 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RJ61_00565 membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bmiy02022]
D RJ61_03780 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D RJ61_02780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_03280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_02705 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02795 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_03295 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02785 glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_01990 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_02015 histidine kinase K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
D RJ61_02010 diguanylate cyclase K18444 rrp1; two-component system, glycerol uptake and utilization response regulator
C 02035 Bacterial motility proteins [BR:bmiy02035]
D RJ61_02780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_03280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RJ61_02770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_01530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_03285 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RJ61_03290 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D RJ61_02950 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RJ61_00195 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RJ61_01985 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RJ61_02785 glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_01990 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RJ61_02705 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02795 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_03295 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RJ61_02900 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_02905 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_03335 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_03340 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RJ61_01415 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RJ61_01410 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RJ61_01350 flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D RJ61_01345 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D RJ61_01340 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RJ61_01335 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RJ61_01325 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RJ61_01330 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RJ61_01420 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RJ61_01065 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RJ61_01360 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RJ61_01355 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RJ61_01425 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RJ61_03825 flgI; flagellar basal body P-ring biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI
D RJ61_01365 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RJ61_01430 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RJ61_01440 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RJ61_01435 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RJ61_01390 flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RJ61_03840 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D RJ61_03835 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RJ61_03820 muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RJ61_01385 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RJ61_00855 flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RJ61_00860 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RJ61_00715 flaB; flagellin FlaB K02406 fliC; flagellin
D RJ61_00720 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D RJ61_02700 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RJ61_01375 Motility protein A K02556 motA; chemotaxis protein MotA
D RJ61_01370 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RJ61_00865 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D RJ61_01405 flagellar protein FlbA K02382 flbA; flagellar protein FlbA
D RJ61_01400 flagellar protein K02383 flbB; flagellar protein FlbB
D RJ61_01395 flagellar hook-length control protein K02384 flbC; flagellar protein FlbC
D RJ61_01380 flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D RJ61_01320 flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RJ61_01315 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D RJ61_03580 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
D RJ61_01745 ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bmiy04812]
D RJ61_03525 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RJ61_01465 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RJ61_01470 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RJ61_03605 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RJ61_02105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bmiy04147]
D RJ61_02750 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RJ61_01635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RJ61_00270 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RJ61_00265 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RJ61_01690 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RJ61_03180 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RJ61_02545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RJ61_01290 heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D RJ61_03600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RJ61_02345 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RJ61_01820 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RJ61_00415 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RJ61_00670 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_02885 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RJ61_00525 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RJ61_02000 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RJ61_03850 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RJ61_01160 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RJ61_03115 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RJ61_00260 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RJ61_03225 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bmiy02048]
D RJ61_02285 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RJ61_01465 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RJ61_03525 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RJ61_00170 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RJ61_00175 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RJ61_01790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bmiy01504]
D RJ61_02840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bmiy03100]
D RJ61_02060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RJ61_02255 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RJ61_02965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RJ61_03680 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RJ61_03060 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RJ61_03090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RJ61_00955 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RJ61_03890 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RJ61_02975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RJ61_00230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RJ61_02960 tRNA-His K14226 tRNA-His; tRNA His
D RJ61_02055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RJ61_02805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_01215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_02970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_03755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RJ61_02620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RJ61_02625 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RJ61_03030 tRNA-Met K14230 tRNA-Met; tRNA Met
D RJ61_03005 tRNA-Met K14230 tRNA-Met; tRNA Met
D RJ61_01020 tRNA-Met K14230 tRNA-Met; tRNA Met
D RJ61_00975 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RJ61_03675 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RJ61_02240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RJ61_02245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RJ61_02260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RJ61_01910 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RJ61_03485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RJ61_01900 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RJ61_03490 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RJ61_03380 tRNA-Val K14237 tRNA-Val; tRNA Val
D RJ61_02065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RJ61_02025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RJ61_02020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RJ61_04185 bacterial RNase P K01978 rnpB; M1 RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RJ61_01135 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RJ61_01750 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RJ61_00035 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RJ61_00915 hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RJ61_03065 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D RJ61_00310 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RJ61_00835 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RJ61_02895 hypothetical protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RJ61_00405 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D RJ61_02980 trigger factor K03545 tig; trigger factor
D RJ61_00160 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RJ61_00410 magnesium chelatase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D RJ61_04160 ribonuclease HI K06993 K06993; ribonuclease H-related protein
D RJ61_01455 DNA repair protein Smf K04096 smf; DNA processing protein
C 99979 Viral proteins
C 99998 Others
D RJ61_02270 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D RJ61_02155 Jag protein K06346 jag; spoIIIJ-associated protein
D RJ61_03885 regulatory protein SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
D RJ61_00025 membrane protein K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D RJ61_00200 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
D RJ61_04120 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RJ61_03790 colicin V synthesis protein K03558 cvpA; membrane protein required for colicin V production
D RJ61_02510 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D RJ61_03760 membrane protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D RJ61_01930 ankyrin K06867 K06867; uncharacterized protein
D RJ61_02640 hypothetical protein K06890 K06890; uncharacterized protein
D RJ61_03595 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D RJ61_03415 RNA-binding protein K06960 K06960; uncharacterized protein
D RJ61_01225 membrane protein K07003 K07003; uncharacterized protein
D RJ61_00495 phosphoribosyl transferase K07101 K07101; uncharacterized protein
D RJ61_03515 Zn-ribbon protein K07164 K07164; uncharacterized protein
D RJ61_00695 hypothetical protein K08998 K08998; uncharacterized protein
D RJ61_03250 hypothetical protein K09005 K09005; uncharacterized protein
D RJ61_01305 hypothetical protein K09749 K09749; uncharacterized protein
D RJ61_00050 hypothetical protein K09766 K09766; uncharacterized protein
D RJ61_00140 hypothetical protein K09768 K09768; uncharacterized protein
D RJ61_01180 UDP-N-acetylenolpyruvoylglucosamine reductase K09770 K09770; uncharacterized protein
D RJ61_00335 membrane protein K09775 K09775; uncharacterized protein
D RJ61_03810 sugar deacetylase K09798 K09798; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024