+E Ribosome biogenesis KO
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Ribosome Biogenesis - Priestia megaterium QM B1551
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D BMQ_4219 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C BMQ_4548 era; GTP-binding protein Era K03595 era; GTPase
C BMQ_4657 obg; Spo0B-associated GTP binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C BMQ_4154 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C BMQ_4459 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C BMQ_0122 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D BMQ_4843 RNA pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D BMQ_0060 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BMQ_4238 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BMQ_0127 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D BMQ_4300 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BMQ_4562 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BMQ_5278 gidB; methyltransferase (glucose inhibited division protein) GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BMQ_4283 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BMQ_0055 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BMQ_4454 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D BMQ_0117 rlmB; 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BMQ_5250 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BMQ_5243 protein of unknown function (UPF0064) K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BMQ_4237 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BMQ_4454 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BMQ_0302 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BMQ_0388 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BMQ_4372 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BMQ_4258 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMQ_0524 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMQ_0730 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMQ_0504 rluF; pseudouridine synthase F (ribosomal large subunit) K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
B ribosomal protein modification factors
C BMQ_0258 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C BMQ_3278 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C BMQ_3152 ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C BMQ_4211 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C BMQ_2733 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
C BMQ_4563 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C BMQ_4219 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C BMQ_4662 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
C BMQ_4609 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C BMQ_0116 mrnC; ribonuclease for 23S RNA maturation K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C BMQ_0221 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C BMQ_0762 dbpA; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C BMQ_1701 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C BMQ_4535 ATP-dependent RNA helicase, DEAD/DEAH box family K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C BMQ_4548 era; GTP-binding protein Era K03595 era; GTPase
C BMQ_4234 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C BMQ_4339 engA; GTP-binding protein EngA K03977 engA; GTPase
C BMQ_4657 obg; Spo0B-associated GTP binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
C BMQ_4207 rbgA; ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
C BMQ_4102 hflX; GTP-binding protein HflX K03665 hflX; GTPase
C BMQ_4585 GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C BMQ_5165 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C BMQ_4631 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BMQ_4149 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C BMQ_4155 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C BMQ_0003 yaaA; S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
C BMQ_4580 protein of unknown function (DUF143) K09710 ybeB; ribosome-associated protein
C BMQ_4551 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C BMQ_4583 putative RNA-binding protein K07574 yhbY; RNA-binding protein
C BMQ_5099 sigma 54 modulation protein / S30EA ribosomal protein K05808 hpf; ribosome hibernation promoting factor
C BMQ_5270 engD; GTP-binding protein EngD K06942 ychF; ribosome-binding ATPase
C BMQ_4294 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024