+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Bifidobacterium animalis subsp. lactis CNCM I-2494

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BALAC2494_00849 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D BALAC2494_00596 Hydrolase acting on ester bonds K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BALAC2494_00021 GTP-binding protein era K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BALAC2494_00720 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA C BALAC2494_00504 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C BALAC2494_01996 NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BALAC2494_01121 Methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BALAC2494_00027 Methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BALAC2494_00862 Methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BALAC2494_00016 Methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BALAC2494_02081 Transferase transferring one-carbon groups K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BALAC2494_00037 Methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BALAC2494_01194 Tetrapyrrole (Corrin/Porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BALAC2494_00394 Ribosomal RNA methyltransferase RrmJ/FtsJ family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D BALAC2494_01026 Methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D BALAC2494_01137 Methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BALAC2494_00586 Transposase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BALAC2494_00352 Methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BALAC2494_00394 Ribosomal RNA methyltransferase RrmJ/FtsJ family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BALAC2494_00572 Pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BALAC2494_00320 tRNA pseudouridine(38-40) synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BALAC2494_01486 tRNA pseudouridine(38-40) synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C BALAC2494_00368 Ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C BALAC2494_00860 RimM K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C BALAC2494_00849 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C BALAC2494_00827 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C BALAC2494_01698 Hydrolase acting on ester bonds K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases B GTPases C BALAC2494_00021 GTP-binding protein era K03595 era; GTPase C BALAC2494_00321 hypothetical protein K03977 engA; GTPase C BALAC2494_00028 HflX K03665 hflX; GTPase B Other maturation factors C BALAC2494_01878 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BALAC2494_00154 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C BALAC2494_00718 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BALAC2494_00381 iojap protein family K09710 ybeB; ribosome-associated protein C BALAC2494_00019 Hypothetical metal-binding protein K07042 ybeY; probable rRNA maturation factor C BALAC2494_00444 Hypothetical RNA binding protein K07574 yhbY; RNA-binding protein C BALAC2494_00200 GTP-binding protein, probable translation factor K06942 ychF; ribosome-binding ATPase C BALAC2494_00847 Hypothetical cytosolic protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024