+D GENES KO #

  KEGG Orthology (KO) - Borrelia nietonii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bny00010] D bhYOR_000737 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000020 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D bhYOR_000441 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D bhYOR_000054 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D bhYOR_000056 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D bhYOR_000055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D bhYOR_000662 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D bhYOR_000331 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D bhYOR_000342 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D bhYOR_000085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000560 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D bhYOR_000114 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000649 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001288 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001289 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] C 00020 Citrate cycle (TCA cycle) C 00030 Pentose phosphate pathway [PATH:bny00030] D bhYOR_000737 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D bhYOR_000641 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D bhYOR_000217 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D bhYOR_000562 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D bhYOR_000661 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D bhYOR_001193 hypothetical protein K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000545 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D bhYOR_000441 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000020 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D bhYOR_000201 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000867 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] C 00051 Fructose and mannose metabolism [PATH:bny00051] D bhYOR_000398 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D bhYOR_000851 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000020 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D bhYOR_000635 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D bhYOR_000441 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D bhYOR_000054 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D bhYOR_000399 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D bhYOR_000634 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:bny00052] D bhYOR_000201 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000867 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism D bhYOR_000440 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:bny00500] D bhYOR_000201 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000867 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_001166 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D bhYOR_001165 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D bhYOR_001167 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D bhYOR_000159 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D bhYOR_000560 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D bhYOR_000114 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000649 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001288 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001289 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000737 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bny00520] D bhYOR_000623 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D bhYOR_000002 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D bhYOR_000560 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D bhYOR_000841 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D bhYOR_000146 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D bhYOR_000147 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D bhYOR_000474 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D bhYOR_000597 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D bhYOR_000648 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D bhYOR_000114 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000649 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001288 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001289 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000201 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000867 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000440 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D bhYOR_000737 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D bhYOR_000398 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D bhYOR_000851 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:bny00620] D bhYOR_000626 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D bhYOR_000588 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D bhYOR_000342 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D bhYOR_001290 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D bhYOR_000085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bny00630] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000680 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D bhYOR_000600 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00640 Propanoate metabolism [PATH:bny00640] D bhYOR_000626 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D bhYOR_000588 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D bhYOR_000085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:bny00650] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000687 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism D bhYOR_000054 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bny00190] D bhYOR_000092 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D bhYOR_000091 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D bhYOR_000090 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D bhYOR_000094 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D bhYOR_000089 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D bhYOR_000088 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bny00710] D bhYOR_000055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D bhYOR_000056 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D bhYOR_000441 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D bhYOR_000661 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D bhYOR_000054 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00720 Other carbon fixation pathways [PATH:bny00720] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000026 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D bhYOR_000588 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D bhYOR_000626 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:bny00680] D bhYOR_000600 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D bhYOR_000331 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D bhYOR_000441 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000626 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D bhYOR_000588 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D bhYOR_000662 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism D bhYOR_000860 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism D bhYOR_000622 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bny00061] D bhYOR_000710 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D bhYOR_000135 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000592 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bny00071] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000135 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000592 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bny00561] D bhYOR_000236 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D bhYOR_000323 1-acyl-sn-glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D bhYOR_000037 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D bhYOR_000451 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:bny00564] D bhYOR_000359 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D bhYOR_000239 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D bhYOR_000323 1-acyl-sn-glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D bhYOR_000037 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D bhYOR_000238 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D bhYOR_000117 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D bhYOR_000245 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D bhYOR_000728 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bny00230] D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000545 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D bhYOR_000416 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D bhYOR_000788 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D bhYOR_000470 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D bhYOR_000414 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D bhYOR_001277 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D bhYOR_000465 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D bhYOR_000243 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D bhYOR_001278 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D bhYOR_001141 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D bhYOR_001140 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D bhYOR_000190 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D bhYOR_000730 cyaB; class IV adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D bhYOR_000415 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D bhYOR_001280 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D bhYOR_000506 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D bhYOR_000407 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D bhYOR_000860 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:bny00240] D bhYOR_000574 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D bhYOR_000465 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D bhYOR_000122 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D bhYOR_000577 pyrG; CTP synthase (glutamine hydrolyzing) K01937 pyrG; CTP synthase [EC:6.3.4.2] D bhYOR_000126 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D bhYOR_000834 AAA family ATPase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D bhYOR_000015 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D bhYOR_000506 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D bhYOR_000621 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D bhYOR_001141 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D bhYOR_001140 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D bhYOR_000806 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D bhYOR_000804 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D bhYOR_001143 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bny00250] D bhYOR_000415 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D bhYOR_000416 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] C 00260 Glycine, serine and threonine metabolism [PATH:bny00260] D bhYOR_000600 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D bhYOR_000662 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00270 Cysteine and methionine metabolism [PATH:bny00270] D bhYOR_000367 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D bhYOR_000366 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D bhYOR_001279 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D bhYOR_000470 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D bhYOR_000368 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D bhYOR_000085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00280 Valine, leucine and isoleucine degradation [PATH:bny00280] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000687 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:bny00300] D bhYOR_000572 Sapep family Mn(2+)-dependent dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D bhYOR_000193 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D bhYOR_000302 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:bny00220] D bhYOR_000858 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D bhYOR_000857 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D bhYOR_000860 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism C 00340 Histidine metabolism C 00350 Tyrosine metabolism C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:bny00430] D bhYOR_000588 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D bhYOR_000626 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D bhYOR_000529 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:bny00450] D bhYOR_000082 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D bhYOR_000515 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D bhYOR_000587 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D bhYOR_000600 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bny00470] D bhYOR_000153 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D bhYOR_000192 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D bhYOR_000098 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D bhYOR_000585 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:bny00480] D bhYOR_000607 pepD; beta-Ala-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D bhYOR_000562 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D bhYOR_000641 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D bhYOR_000520 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bny00541] D bhYOR_000201 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000867 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D bhYOR_000440 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D bhYOR_000398 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D bhYOR_000851 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00550 Peptidoglycan biosynthesis [PATH:bny00550] D bhYOR_000474 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D bhYOR_000597 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D bhYOR_000832 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D bhYOR_000585 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D bhYOR_000193 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D bhYOR_000192 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D bhYOR_000302 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D bhYOR_000118 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D bhYOR_000256 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D bhYOR_000301 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D bhYOR_000777 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D bhYOR_000739 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D bhYOR_000725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D bhYOR_000134 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D bhYOR_000604 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D bhYOR_000583 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:bny00552] D bhYOR_000256 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D bhYOR_000451 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bny00730] D bhYOR_000097 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D bhYOR_000407 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism C 00750 Vitamin B6 metabolism [PATH:bny00750] D bhYOR_000778 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] C 00760 Nicotinate and nicotinamide metabolism [PATH:bny00760] D bhYOR_000640 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D bhYOR_000793 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D bhYOR_000521 nadE; NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D bhYOR_001243 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D bhYOR_000309 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:bny00770] D bhYOR_000525 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D bhYOR_000827 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D bhYOR_000708 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D bhYOR_000548 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D bhYOR_000010 4'-phosphopantetheinyl transferase superfamily protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis C 00670 One carbon pool by folate [PATH:bny00670] D bhYOR_000026 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D bhYOR_000600 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D bhYOR_000063 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D bhYOR_001143 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism D bhYOR_000363 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bny00900] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000687 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D bhYOR_000689 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D bhYOR_000692 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D bhYOR_000691 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D bhYOR_000690 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D bhYOR_000688 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D bhYOR_000312 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D bhYOR_000118 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D bhYOR_000004 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D bhYOR_000866 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D bhYOR_000710 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D bhYOR_000367 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D bhYOR_001290 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bny03020] D bhYOR_000379 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D bhYOR_000378 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D bhYOR_000503 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bny03010] D bhYOR_000121 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D bhYOR_000485 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D bhYOR_000617 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D bhYOR_000496 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D bhYOR_000113 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D bhYOR_000376 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D bhYOR_000493 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D bhYOR_000332 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D bhYOR_000478 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D bhYOR_000502 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D bhYOR_000377 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D bhYOR_000501 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D bhYOR_000492 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D bhYOR_000819 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D bhYOR_000699 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D bhYOR_000488 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D bhYOR_000111 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D bhYOR_000483 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D bhYOR_000227 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D bhYOR_000254 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D bhYOR_000382 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D bhYOR_000482 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D bhYOR_000479 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D bhYOR_000480 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D bhYOR_000491 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D bhYOR_000494 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D bhYOR_000380 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D bhYOR_000110 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D bhYOR_000381 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D bhYOR_000383 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D bhYOR_000333 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D bhYOR_000489 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D bhYOR_000498 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D bhYOR_000486 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D bhYOR_000504 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D bhYOR_000495 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D bhYOR_000703 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D bhYOR_000181 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D bhYOR_000789 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D bhYOR_000484 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D bhYOR_000481 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D bhYOR_000490 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D bhYOR_000798 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D bhYOR_000791 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D bhYOR_000344 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D bhYOR_000487 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D bhYOR_000497 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D bhYOR_000223 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D bhYOR_000709 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D bhYOR_000387 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D bhYOR_000436 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D bhYOR_000182 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D bhYOR_000500 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:bny00970] D bhYOR_000363 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D bhYOR_000336 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D bhYOR_000335 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D bhYOR_000337 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D bhYOR_000215 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D bhYOR_000443 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D bhYOR_000099 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D bhYOR_000362 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D bhYOR_000727 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D bhYOR_000220 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D bhYOR_000598 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D bhYOR_000587 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D bhYOR_000063 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D bhYOR_000748 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D bhYOR_000248 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D bhYOR_000849 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D bhYOR_000663 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D bhYOR_000593 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D bhYOR_000395 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D bhYOR_000133 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D bhYOR_000513 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D bhYOR_000514 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D bhYOR_000361 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D bhYOR_000005 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D bhYOR_000865 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bny03060] D bhYOR_000499 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D bhYOR_000385 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D bhYOR_000053 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D bhYOR_000656 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D bhYOR_000657 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D bhYOR_000655 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D bhYOR_000438 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D bhYOR_000149 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D bhYOR_000698 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D bhYOR_000075 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D bhYOR_000030 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D bhYOR_000031 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D bhYOR_000261 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D bhYOR_000472 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system D bhYOR_000686 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:bny03018] D bhYOR_000331 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D bhYOR_000820 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D bhYOR_000224 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D bhYOR_000505 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000518 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D bhYOR_000262 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D bhYOR_000653 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:bny03030] D bhYOR_000580 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D bhYOR_000462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000775 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000452 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D bhYOR_000433 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D bhYOR_000109 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D bhYOR_000717 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D bhYOR_000112 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000910 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000952 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000994 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001038 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001550 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001592 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000045 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D bhYOR_000549 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D bhYOR_000553 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bny03410] D bhYOR_000756 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D bhYOR_000052 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D bhYOR_000417 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D bhYOR_000013 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D bhYOR_000530 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D bhYOR_000549 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D bhYOR_000252 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D bhYOR_000553 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bny03420] D bhYOR_000627 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D bhYOR_000853 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D bhYOR_000852 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D bhYOR_000453 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D bhYOR_000338 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D bhYOR_000549 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D bhYOR_000553 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bny03430] D bhYOR_000811 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D bhYOR_000096 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D bhYOR_000205 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D bhYOR_000338 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D bhYOR_000252 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D bhYOR_000112 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000910 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000952 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000994 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001038 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001550 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001592 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000580 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D bhYOR_000433 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D bhYOR_000462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000775 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000452 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D bhYOR_000553 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D bhYOR_000466 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000907 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000949 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000991 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001035 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001553 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001595 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:bny03440] D bhYOR_000252 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D bhYOR_000112 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000910 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000952 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000994 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001038 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001550 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001592 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000434 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D bhYOR_000464 recR; recombination protein RecR K06187 recR; recombination protein RecR D bhYOR_000129 recA; recombinase RecA K03553 recA; recombination protein RecA D bhYOR_000549 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D bhYOR_000023 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D bhYOR_000022 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D bhYOR_000582 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D bhYOR_000638 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D bhYOR_000639 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D bhYOR_000637 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D bhYOR_000580 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D bhYOR_000433 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D bhYOR_000462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000775 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000452 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D bhYOR_000014 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bny02010] D bhYOR_000643 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D bhYOR_000644 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D bhYOR_000645 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D bhYOR_000646 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D bhYOR_000141 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D bhYOR_000142 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D bhYOR_000143 ATP-binding cassette domain-containing protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D bhYOR_000372 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000373 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000374 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000375 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000682 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D bhYOR_000683 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D bhYOR_000681 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D bhYOR_000210 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D bhYOR_000211 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D bhYOR_000212 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D bhYOR_000213 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D bhYOR_000324 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000325 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000861 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000326 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D bhYOR_000327 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D bhYOR_000328 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D bhYOR_000329 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D bhYOR_000077 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D bhYOR_000079 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D bhYOR_000078 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D bhYOR_000822 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D bhYOR_000823 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D bhYOR_000469 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:bny02060] D bhYOR_000559 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D bhYOR_000445 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D bhYOR_000558 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D bhYOR_000560 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D bhYOR_000841 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D bhYOR_000114 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000649 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001288 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001289 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001166 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D bhYOR_001165 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D bhYOR_001167 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D bhYOR_000399 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D bhYOR_000634 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D bhYOR_000635 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:bny03070] D bhYOR_000656 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D bhYOR_000657 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D bhYOR_000385 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D bhYOR_000053 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D bhYOR_000499 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D bhYOR_000655 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D bhYOR_000438 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D bhYOR_000149 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D bhYOR_000075 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D bhYOR_000698 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bny02020] D bhYOR_000210 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D bhYOR_000803 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D bhYOR_000144 flagellin K02406 fliC; flagellin D bhYOR_000279 motility protein A K02556 motA; chemotaxis protein MotA D bhYOR_000432 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D bhYOR_000583 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D bhYOR_000774 ATP-binding protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D bhYOR_000177 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000040 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D bhYOR_000404 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D bhYOR_000579 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000596 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000684 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000685 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000310 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000566 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000674 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000568 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000673 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000552 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000571 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000676 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000405 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000569 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000410 transporter substrate-binding domain-containing protein K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3] D bhYOR_000409 diguanylate cyclase K18444 rrp1; two-component system, glycerol uptake and utilization response regulator C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bny02024] D bhYOR_000368 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D bhYOR_000135 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000592 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000324 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000325 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000861 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000326 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D bhYOR_000327 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D bhYOR_000328 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D bhYOR_000329 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D bhYOR_000758 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D bhYOR_000757 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D bhYOR_000438 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D bhYOR_000385 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D bhYOR_000053 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D bhYOR_000499 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D bhYOR_000655 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D bhYOR_000149 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D bhYOR_000075 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D bhYOR_000698 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:bny02030] D bhYOR_000579 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000596 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000684 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000685 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000568 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000673 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000310 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000566 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000674 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000552 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000571 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000676 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000675 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D bhYOR_000405 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000569 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000606 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D bhYOR_000040 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D bhYOR_000404 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D bhYOR_000216 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D bhYOR_000288 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D bhYOR_000276 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D bhYOR_000275 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D bhYOR_000279 motility protein A K02556 motA; chemotaxis protein MotA D bhYOR_000278 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:bny02040] D bhYOR_000290 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D bhYOR_000289 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D bhYOR_000216 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D bhYOR_000288 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D bhYOR_000287 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D bhYOR_000286 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D bhYOR_000277 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D bhYOR_000276 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D bhYOR_000275 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D bhYOR_000274 flagella biosynthesis regulatory protein FliZ K02418 fliO; flagellar protein FliO/FliZ D bhYOR_000273 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D bhYOR_000272 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D bhYOR_000271 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D bhYOR_000269 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D bhYOR_000270 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D bhYOR_000292 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D bhYOR_000291 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D bhYOR_000282 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D bhYOR_000281 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D bhYOR_000786 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D bhYOR_000785 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D bhYOR_000783 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D bhYOR_000782 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D bhYOR_000174 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D bhYOR_000175 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D bhYOR_000144 flagellin K02406 fliC; flagellin D bhYOR_000145 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D bhYOR_000551 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D bhYOR_000279 motility protein A K02556 motA; chemotaxis protein MotA D bhYOR_000278 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D bhYOR_000718 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D bhYOR_000331 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bny01501] D bhYOR_000623 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D bhYOR_000002 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D bhYOR_000324 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000325 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000861 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000326 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D bhYOR_000327 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D bhYOR_000328 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D bhYOR_000329 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D bhYOR_000739 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D bhYOR_000725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D bhYOR_000134 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bny01502] D bhYOR_000192 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D bhYOR_000153 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D bhYOR_000302 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D bhYOR_000301 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D bhYOR_000777 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D bhYOR_000583 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bny01503] D bhYOR_000629 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D bhYOR_000670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D bhYOR_000803 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bny01000] C 01001 Protein kinases [BR:bny01001] D bhYOR_000774 ATP-binding protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D bhYOR_000568 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000673 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000410 transporter substrate-binding domain-containing protein K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bny01009] D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000561 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:bny01002] D bhYOR_000472 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D bhYOR_001278 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D bhYOR_000625 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D bhYOR_000591 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D bhYOR_000244 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D bhYOR_000583 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D bhYOR_000222 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D bhYOR_000532 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D bhYOR_000572 Sapep family Mn(2+)-dependent dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D bhYOR_000607 pepD; beta-Ala-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D bhYOR_000103 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D bhYOR_000066 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D bhYOR_000068 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D bhYOR_000801 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D bhYOR_000116 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D bhYOR_000803 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D bhYOR_000604 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D bhYOR_000613 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D bhYOR_000767 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D bhYOR_000250 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D bhYOR_000615 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D bhYOR_000030 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D bhYOR_000031 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D bhYOR_000261 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D bhYOR_000352 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D bhYOR_000294 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D bhYOR_000197 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D bhYOR_000196 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:bny01003] D bhYOR_000451 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D bhYOR_000739 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bny01011] D bhYOR_000474 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D bhYOR_000597 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D bhYOR_000832 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D bhYOR_000585 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D bhYOR_000193 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D bhYOR_000192 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D bhYOR_000153 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D bhYOR_000098 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D bhYOR_000301 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D bhYOR_000777 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D bhYOR_000256 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D bhYOR_000825 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D bhYOR_000739 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D bhYOR_000725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D bhYOR_000134 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D bhYOR_000604 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D bhYOR_000583 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D bhYOR_000257 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D bhYOR_000716 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D bhYOR_000743 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D bhYOR_000629 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D bhYOR_000670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:bny01004] D bhYOR_000135 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000592 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000323 1-acyl-sn-glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D bhYOR_000037 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bny01006] D bhYOR_000312 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D bhYOR_000118 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D bhYOR_000836 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:bny01007] D bhYOR_000663 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D bhYOR_000363 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D bhYOR_000361 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D bhYOR_000005 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D bhYOR_000865 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D bhYOR_000598 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D bhYOR_000593 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D bhYOR_000587 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D bhYOR_000849 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D bhYOR_000748 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D bhYOR_000248 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D bhYOR_000443 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D bhYOR_000099 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D bhYOR_000133 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D bhYOR_000362 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D bhYOR_000220 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D bhYOR_000395 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D bhYOR_000727 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D bhYOR_000215 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D bhYOR_000513 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D bhYOR_000514 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bny03000] D bhYOR_000651 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D bhYOR_000429 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D bhYOR_000738 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D bhYOR_000349 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D bhYOR_000161 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:bny03021] D bhYOR_000503 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D bhYOR_000379 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D bhYOR_000378 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D bhYOR_000718 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D bhYOR_000781 RNA polymerase sigma factor RpoD/SigA K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D bhYOR_000814 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D bhYOR_000105 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D bhYOR_000384 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D bhYOR_000522 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D bhYOR_000161 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D bhYOR_000224 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bny03019] D bhYOR_000711 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D bhYOR_000505 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D bhYOR_000331 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D bhYOR_000820 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D bhYOR_000224 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D bhYOR_000734 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D bhYOR_000518 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D bhYOR_000262 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D bhYOR_000653 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D bhYOR_000177 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:bny03011] D bhYOR_000121 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D bhYOR_000485 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D bhYOR_000617 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D bhYOR_000496 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D bhYOR_000113 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D bhYOR_000376 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D bhYOR_000493 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D bhYOR_000332 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D bhYOR_000478 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D bhYOR_000502 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D bhYOR_000377 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D bhYOR_000501 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D bhYOR_000492 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D bhYOR_000819 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D bhYOR_000699 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D bhYOR_000488 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D bhYOR_000111 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D bhYOR_000483 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D bhYOR_000227 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D bhYOR_000254 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D bhYOR_000382 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D bhYOR_000482 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D bhYOR_000479 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D bhYOR_000480 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D bhYOR_000491 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D bhYOR_000494 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D bhYOR_000110 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D bhYOR_000381 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D bhYOR_000383 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D bhYOR_000380 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D bhYOR_000333 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D bhYOR_000489 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D bhYOR_000498 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D bhYOR_000486 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D bhYOR_000504 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D bhYOR_000495 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D bhYOR_000703 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D bhYOR_000181 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D bhYOR_000789 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D bhYOR_000484 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D bhYOR_000481 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D bhYOR_000490 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D bhYOR_000791 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D bhYOR_000344 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D bhYOR_000487 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D bhYOR_000497 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D bhYOR_000223 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D bhYOR_000709 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D bhYOR_000387 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D bhYOR_000436 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D bhYOR_000182 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D bhYOR_000500 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D bhYOR_000798 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:bny03009] D bhYOR_000711 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D bhYOR_000664 era; GTPase Era K03595 era; GTPase D bhYOR_000792 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D bhYOR_000161 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D bhYOR_000814 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D bhYOR_000105 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D bhYOR_000384 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D bhYOR_000589 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D bhYOR_000200 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D bhYOR_000061 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D bhYOR_000351 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D bhYOR_000170 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D bhYOR_000304 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D bhYOR_000423 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D bhYOR_000507 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D bhYOR_000516 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D bhYOR_000311 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D bhYOR_000127 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D bhYOR_000830 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D bhYOR_000018 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D bhYOR_000701 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D bhYOR_000097 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D bhYOR_000509 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D bhYOR_000647 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D bhYOR_000742 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D bhYOR_000190 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D bhYOR_000816 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D bhYOR_000813 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D bhYOR_000795 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D bhYOR_000059 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D bhYOR_000229 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:bny03016] D bhYOR_000765 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D bhYOR_000712 [cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D bhYOR_000363 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D bhYOR_000395 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D bhYOR_000849 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D bhYOR_000248 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D bhYOR_000587 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D bhYOR_000593 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D bhYOR_000443 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D bhYOR_000215 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D bhYOR_000099 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D bhYOR_000362 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D bhYOR_000727 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D bhYOR_000220 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D bhYOR_000598 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D bhYOR_000748 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D bhYOR_000133 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D bhYOR_000513 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D bhYOR_000514 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D bhYOR_000361 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D bhYOR_000005 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D bhYOR_000865 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D bhYOR_000369 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D bhYOR_000012 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D bhYOR_000817 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D bhYOR_000742 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D bhYOR_000836 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D bhYOR_000172 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D bhYOR_000171 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D bhYOR_000437 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D bhYOR_000663 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D bhYOR_000219 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D bhYOR_000702 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D bhYOR_000051 RNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D bhYOR_000686 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D bhYOR_000021 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D bhYOR_000824 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D bhYOR_000800 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D bhYOR_000178 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D bhYOR_000779 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D bhYOR_000179 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D bhYOR_000820 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bny03012] D bhYOR_000815 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D bhYOR_000183 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D bhYOR_000120 elongation factor Ts K02357 tsf; elongation factor Ts D bhYOR_000477 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D bhYOR_000540 elongation factor G K02355 fusA; elongation factor G D bhYOR_000696 elongation factor G K02355 fusA; elongation factor G D bhYOR_000188 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D bhYOR_000119 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D bhYOR_000189 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D bhYOR_000799 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D bhYOR_000162 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D bhYOR_000209 efp; elongation factor P K02356 efp; elongation factor P D bhYOR_000073 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bny03110] D bhYOR_000360 ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D bhYOR_000850 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D bhYOR_000614 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D bhYOR_000293 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D bhYOR_000561 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D bhYOR_000518 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D bhYOR_000262 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D bhYOR_000653 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D bhYOR_000517 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D bhYOR_000659 J domain-containing protein K05516 cbpA; curved DNA-binding protein D bhYOR_000519 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D bhYOR_000442 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D bhYOR_000750 groES; co-chaperone GroES K04078 groES; chaperonin GroES D bhYOR_000803 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D bhYOR_000801 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D bhYOR_000060 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:bny04131] D bhYOR_000465 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D bhYOR_000056 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D bhYOR_000662 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D bhYOR_000342 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D bhYOR_000561 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:bny03051] D bhYOR_000561 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:bny03032] D bhYOR_000226 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D bhYOR_000432 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D bhYOR_000109 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D bhYOR_000717 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D bhYOR_000112 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000910 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000952 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000994 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001038 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001550 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001592 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000580 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D bhYOR_000433 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D bhYOR_000452 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D bhYOR_000462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000775 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000045 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D bhYOR_000549 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D bhYOR_000553 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D bhYOR_000466 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000907 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000949 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000991 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001035 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001553 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001595 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000430 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D bhYOR_000431 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D bhYOR_000035 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D bhYOR_000036 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D bhYOR_000843 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bny03036] D bhYOR_000711 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D bhYOR_000226 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D bhYOR_000659 J domain-containing protein K05516 cbpA; curved DNA-binding protein D bhYOR_000432 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D bhYOR_000695 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D bhYOR_000044 AAA family ATPase K03529 smc; chromosome segregation protein D bhYOR_000298 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D bhYOR_000134 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D bhYOR_000255 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D bhYOR_000299 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D bhYOR_000300 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D bhYOR_000297 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D bhYOR_000629 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D bhYOR_000670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D bhYOR_000722 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D bhYOR_000723 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D bhYOR_000726 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D bhYOR_000427 ParA family protein K03496 parA; chromosome partitioning protein D bhYOR_001296 ParA family protein K03496 parA; chromosome partitioning protein D bhYOR_001358 ParA family protein K03496 parA; chromosome partitioning protein D bhYOR_000429 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D bhYOR_000738 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D bhYOR_000035 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D bhYOR_000036 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D bhYOR_000171 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D bhYOR_000170 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] C 03400 DNA repair and recombination proteins [BR:bny03400] D bhYOR_000052 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D bhYOR_000417 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D bhYOR_000756 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D bhYOR_000013 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D bhYOR_000530 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D bhYOR_000252 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D bhYOR_000553 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D bhYOR_000549 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D bhYOR_000853 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D bhYOR_000852 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D bhYOR_000453 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D bhYOR_000338 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D bhYOR_000379 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D bhYOR_000378 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D bhYOR_000503 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D bhYOR_000627 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D bhYOR_000811 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D bhYOR_000096 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D bhYOR_000205 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D bhYOR_000580 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D bhYOR_000433 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D bhYOR_000452 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D bhYOR_000462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000775 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D bhYOR_000112 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000910 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000952 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000994 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001038 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001550 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001592 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000466 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000907 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000949 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000991 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001035 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001553 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001595 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000638 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D bhYOR_000639 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D bhYOR_000637 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D bhYOR_000129 recA; recombinase RecA K03553 recA; recombination protein RecA D bhYOR_000023 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D bhYOR_000022 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D bhYOR_000014 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D bhYOR_000845 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D bhYOR_000844 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D bhYOR_000421 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D bhYOR_000434 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D bhYOR_000582 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D bhYOR_000464 recR; recombination protein RecR K06187 recR; recombination protein RecR D bhYOR_000430 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D bhYOR_000431 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D bhYOR_000843 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D bhYOR_000226 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D bhYOR_000744 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D bhYOR_001141 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D bhYOR_001140 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D bhYOR_000622 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:bny03029] D bhYOR_000815 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D bhYOR_000183 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D bhYOR_000120 elongation factor Ts K02357 tsf; elongation factor Ts D bhYOR_000477 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D bhYOR_000540 elongation factor G K02355 fusA; elongation factor G D bhYOR_000696 elongation factor G K02355 fusA; elongation factor G D bhYOR_000664 era; GTPase Era K03595 era; GTPase D bhYOR_000361 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D bhYOR_000248 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D bhYOR_000443 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D bhYOR_000362 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D bhYOR_000593 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D bhYOR_000336 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D bhYOR_000335 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D bhYOR_000337 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D bhYOR_000401 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D bhYOR_000112 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000910 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000952 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000994 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001038 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001550 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_001592 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D bhYOR_000808 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D bhYOR_000518 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D bhYOR_000262 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D bhYOR_000519 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D bhYOR_000653 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D bhYOR_000750 groES; co-chaperone GroES K04078 groES; chaperonin GroES D bhYOR_000517 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D bhYOR_000438 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D bhYOR_000561 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bny02000] D bhYOR_000643 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D bhYOR_000644 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D bhYOR_000645 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D bhYOR_000646 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D bhYOR_000141 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D bhYOR_000142 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D bhYOR_000143 ATP-binding cassette domain-containing protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D bhYOR_000372 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000373 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000374 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000375 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D bhYOR_000682 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D bhYOR_000683 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D bhYOR_000681 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D bhYOR_000317 BMP family ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D bhYOR_000315 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D bhYOR_000316 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D bhYOR_000210 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D bhYOR_000211 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D bhYOR_000212 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D bhYOR_000213 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D bhYOR_000324 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000325 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000861 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D bhYOR_000326 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D bhYOR_000327 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D bhYOR_000328 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D bhYOR_000329 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D bhYOR_000758 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D bhYOR_000757 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D bhYOR_000822 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D bhYOR_000823 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D bhYOR_000469 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D bhYOR_000763 ABC transporter permease subunit K25151 gldF; gliding motility-associated transport system permease protein D bhYOR_000764 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D bhYOR_000762 Gldg family protein K25153 gldG; gliding motility-associatede transport system auxiliary component D bhYOR_000077 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D bhYOR_000079 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D bhYOR_000078 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D bhYOR_000576 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D bhYOR_000475 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D bhYOR_000584 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D bhYOR_000237 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D bhYOR_000559 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D bhYOR_000445 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D bhYOR_000558 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D bhYOR_000560 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D bhYOR_000841 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D bhYOR_000114 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000649 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001288 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_001289 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D bhYOR_000399 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D bhYOR_000634 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D bhYOR_001166 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D bhYOR_001165 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D bhYOR_001167 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D bhYOR_000235 aquaporin family protein K02440 glpF; glycerol uptake facilitator D bhYOR_000165 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D bhYOR_000166 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D bhYOR_000450 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D bhYOR_000370 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D bhYOR_000279 motility protein A K02556 motA; chemotaxis protein MotA D bhYOR_000278 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D bhYOR_000195 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D bhYOR_000808 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D bhYOR_000468 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D bhYOR_000058 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein D bhYOR_000214 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D bhYOR_000603 lactate permease LctP family transporter K03303 lutP; lactate permease D bhYOR_000157 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D bhYOR_000829 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D bhYOR_000444 cation:proton antiporter K26730 napA; Na+:H+ antiporter D bhYOR_000731 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D bhYOR_000732 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D bhYOR_001282 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D bhYOR_000448 chromate transporter K07240 chrA; chromate transporter D bhYOR_000449 chromate transporter K07240 chrA; chromate transporter D bhYOR_000825 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D bhYOR_000049 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D bhYOR_000050 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D bhYOR_000300 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW C 02044 Secretion system [BR:bny02044] D bhYOR_000581 YggT family protein K02221 yggT; YggT family protein D bhYOR_000590 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D bhYOR_000812 amidophosphoribosyltransferase K02242 comFC; competence protein ComFC D bhYOR_000269 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D bhYOR_000270 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D bhYOR_000705 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D bhYOR_000289 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D bhYOR_000287 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D bhYOR_000286 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D bhYOR_000275 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D bhYOR_000274 flagella biosynthesis regulatory protein FliZ K02418 fliO; flagellar protein FliO/FliZ D bhYOR_000273 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D bhYOR_000272 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D bhYOR_000271 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D bhYOR_000149 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D bhYOR_000656 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D bhYOR_000385 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D bhYOR_000657 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D bhYOR_000053 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D bhYOR_000499 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D bhYOR_000698 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D bhYOR_000075 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D bhYOR_000655 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D bhYOR_000438 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:bny02042] D bhYOR_000195 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D bhYOR_000115 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:bny02022] D bhYOR_000774 ATP-binding protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D bhYOR_000568 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000673 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000552 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000571 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000676 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000405 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000569 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000410 transporter substrate-binding domain-containing protein K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3] D bhYOR_000409 diguanylate cyclase K18444 rrp1; two-component system, glycerol uptake and utilization response regulator C 02035 Bacterial motility proteins [BR:bny02035] D bhYOR_000568 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000673 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D bhYOR_000310 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000566 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000674 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D bhYOR_000675 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D bhYOR_000606 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D bhYOR_000040 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D bhYOR_000404 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D bhYOR_000405 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000569 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D bhYOR_000552 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000571 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000676 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D bhYOR_000579 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000596 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000684 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000685 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D bhYOR_000287 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D bhYOR_000286 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D bhYOR_000274 flagella biosynthesis regulatory protein FliZ K02418 fliO; flagellar protein FliO/FliZ D bhYOR_000273 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D bhYOR_000272 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D bhYOR_000271 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D bhYOR_000269 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D bhYOR_000270 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D bhYOR_000216 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D bhYOR_000288 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D bhYOR_000276 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D bhYOR_000275 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D bhYOR_000289 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D bhYOR_000783 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D bhYOR_000277 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D bhYOR_000290 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D bhYOR_000292 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D bhYOR_000291 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D bhYOR_000282 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D bhYOR_000786 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D bhYOR_000785 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D bhYOR_000782 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D bhYOR_000281 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D bhYOR_000174 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D bhYOR_000175 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D bhYOR_000144 flagellin K02406 fliC; flagellin D bhYOR_000145 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D bhYOR_000551 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D bhYOR_000279 motility protein A K02556 motA; chemotaxis protein MotA D bhYOR_000278 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D bhYOR_000176 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D bhYOR_000285 flagellar protein FlbA K02382 flbA; flagellar protein FlbA D bhYOR_000284 flagellar protein K02383 flbB; flagellar protein FlbB D bhYOR_000283 flagellar hook-length control protein FliK K02384 flbC; flagellar protein FlbC D bhYOR_000280 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D bhYOR_000268 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D bhYOR_000267 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D bhYOR_000354 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D bhYOR_000733 P-loop NTPase K04562 flhG; flagellar biosynthesis protein FlhG C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bny04812] D bhYOR_000722 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D bhYOR_000297 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D bhYOR_000298 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D bhYOR_000427 ParA family protein K03496 parA; chromosome partitioning protein D bhYOR_001296 ParA family protein K03496 parA; chromosome partitioning protein D bhYOR_001358 ParA family protein K03496 parA; chromosome partitioning protein D bhYOR_000429 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D bhYOR_000738 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bny04147] D bhYOR_000561 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D bhYOR_000331 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D bhYOR_000056 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D bhYOR_000055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D bhYOR_000342 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D bhYOR_000653 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D bhYOR_000518 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D bhYOR_000262 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D bhYOR_000737 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D bhYOR_001277 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D bhYOR_000477 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D bhYOR_000369 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D bhYOR_000085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D bhYOR_000135 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000592 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D bhYOR_000107 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D bhYOR_000407 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D bhYOR_000788 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D bhYOR_000236 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D bhYOR_000641 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D bhYOR_000054 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D bhYOR_000662 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bny02048] D bhYOR_000466 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000907 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000949 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000991 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001035 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001553 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_001595 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D bhYOR_000297 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D bhYOR_000722 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D bhYOR_000035 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D bhYOR_000036 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D bhYOR_000363 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:bny01504] D bhYOR_000583 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D bhYOR_000231 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D bhYOR_000355 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D bhYOR_000846 ROK family protein K18673 bglK; beta-glucoside kinase [EC:2.7.1.85] D bhYOR_000008 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D bhYOR_000186 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D bhYOR_000631 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D bhYOR_000064 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D bhYOR_000169 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D bhYOR_000403 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D bhYOR_000083 iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism D bhYOR_001142 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D bhYOR_000612 trigger factor K03545 tig; trigger factor D bhYOR_000033 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D bhYOR_000084 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D bhYOR_000855 ribonuclease H family protein K06993 K06993; ribonuclease H-related protein D bhYOR_000706 YraN family protein K07460 yraN; putative endonuclease D bhYOR_000295 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein C 99979 Viral proteins C 99998 Others D bhYOR_000463 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D bhYOR_000137 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family C 99978 Cell growth D bhYOR_000439 protein jag K06346 jag; spoIIIJ-associated protein D bhYOR_000796 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G C 99993 Cell motility C 99995 Signaling proteins C 99992 Structural proteins D bhYOR_000006 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA D bhYOR_000864 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA C 99994 Others D bhYOR_000041 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D bhYOR_000847 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D bhYOR_000776 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D bhYOR_000511 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D bhYOR_000770 DUF368 domain-containing protein K08974 K08974; putative membrane protein C 99997 Function unknown D bhYOR_000392 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D bhYOR_000539 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D bhYOR_000736 cation:dicarboxylase symporter family transporter K06956 K06956; uncharacterized protein D bhYOR_000700 KH domain-containing protein K06960 K06960; uncharacterized protein D bhYOR_000249 RND family transporter K07003 K07003; uncharacterized protein D bhYOR_000101 phosphoribosyltransferase K07101 K07101; uncharacterized protein D bhYOR_000719 zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein D bhYOR_000140 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D bhYOR_000667 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D bhYOR_000265 DUF342 domain-containing protein K09749 K09749; uncharacterized protein D bhYOR_000011 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein D bhYOR_000029 DUF188 domain-containing protein K09768 K09768; uncharacterized protein D bhYOR_000240 DUF327 family protein K09770 K09770; uncharacterized protein D bhYOR_000069 divergent PAP2 family protein K09775 K09775; uncharacterized protein D bhYOR_000218 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D bhYOR_000780 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D bhYOR_001164 DUF871 domain-containing protein K09963 K09963; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024