+D GENES KO
#
KEGG Orthology (KO) - Bombella sp. ESL0368
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bob00010]
D GN304_04590 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GN304_02620 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D GN304_00945 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D GN304_08075 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GN304_04035 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GN304_07405 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GN304_07400 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GN304_04385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_02710 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_04010 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GN304_03780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GN304_04065 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GN304_04070 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GN304_04075 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GN304_07350 alcohol dehydrogenase catalytic domain-containing protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D GN304_08210 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D GN304_06915 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GN304_03415 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
C 00020 Citrate cycle (TCA cycle) [PATH:bob00020]
D GN304_02725 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GN304_02730 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GN304_02720 NAD-dependent isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D GN304_01285 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GN304_00030 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_02350 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GN304_04065 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GN304_04070 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GN304_04075 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bob00030]
D GN304_02620 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D GN304_05640 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GN304_02635 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D GN304_05245 beta-propeller fold lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GN304_02625 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GN304_00535 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GN304_02615 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GN304_02640 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GN304_08625 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GN304_06870 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D GN304_06865 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GN304_04870 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D GN304_06185 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D GN304_04940 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D GN304_04950 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D GN304_02700 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GN304_08205 FAD-binding protein K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D GN304_08200 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D GN304_02645 AAA family ATPase K00851 idnK; gluconokinase [EC:2.7.1.12]
D GN304_08075 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GN304_00945 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:bob00040]
D GN304_08405 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GN304_05270 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GN304_00535 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GN304_03130 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110]
C 00051 Fructose and mannose metabolism [PATH:bob00051]
D GN304_00130 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GN304_08545 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GN304_05265 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D GN304_05570 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D GN304_00945 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D GN304_08075 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GN304_04035 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GN304_08680 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
C 00052 Galactose metabolism [PATH:bob00052]
D GN304_06915 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GN304_03415 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GN304_03575 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GN304_05270 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GN304_04590 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GN304_07115 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
C 00053 Ascorbate and aldarate metabolism [PATH:bob00053]
D GN304_08405 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GN304_02700 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GN304_00330 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:bob00500]
D GN304_02340 hypothetical protein K01212 sacC; levanase [EC:3.2.1.65]
D GN304_05270 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GN304_04315 carbohydrate-binding protein K05988 dexA; dextranase [EC:3.2.1.11]
D GN304_04590 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GN304_02620 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D GN304_00130 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bob00520]
D GN304_00130 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GN304_04685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GN304_02585 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GN304_04680 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GN304_01380 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GN304_05710 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GN304_03675 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D GN304_04590 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GN304_05270 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GN304_08405 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GN304_03575 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GN304_07115 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GN304_00330 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GN304_02620 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D GN304_05265 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D GN304_08545 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:bob00620]
D GN304_04065 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GN304_04070 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GN304_04075 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GN304_07350 alcohol dehydrogenase catalytic domain-containing protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D GN304_08210 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D GN304_03780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GN304_03120 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GN304_02095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GN304_02100 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GN304_01245 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GN304_08125 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D GN304_03260 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GN304_06260 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GN304_00320 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GN304_02355 maeA; oxaloacetate-decarboxylating malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GN304_02350 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GN304_05445 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GN304_02855 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bob00630]
D GN304_02725 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GN304_02730 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GN304_00050 catalase K03781 katE; catalase [EC:1.11.1.6]
D GN304_08230 catalase K03781 katE; catalase [EC:1.11.1.6]
D GN304_02825 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GN304_00135 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GN304_04180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GN304_00120 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_01720 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GN304_06865 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:bob00640]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_03120 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GN304_02095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GN304_02100 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GN304_01245 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GN304_08245 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D GN304_02665 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:bob00650]
D GN304_01135 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GN304_08240 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GN304_00095 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_05620 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_05625 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:bob00660]
D GN304_00095 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_05620 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_05625 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D GN304_05905 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GN304_05900 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GN304_05895 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bob00562]
D GN304_06085 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GN304_04760 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GN304_04035 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bob00190]
D GN304_02500 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D GN304_01465 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D GN304_01460 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GN304_01455 ubiquinol-cytochrome C reductase K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D GN304_03445 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GN304_03645 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D GN304_03440 hypothetical protein K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D GN304_03640 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D GN304_03635 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D GN304_03630 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D GN304_00005 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GN304_00010 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GN304_00665 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GN304_00675 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GN304_00670 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GN304_00660 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GN304_00680 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GN304_00205 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GN304_00190 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GN304_00195 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GN304_00200 F0F1 ATP synthase subunit C K02128 ATPeF0C; F-type H+-transporting ATPase subunit c
D GN304_07990 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D GN304_03715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bob00680]
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GN304_04850 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D GN304_04180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GN304_04010 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GN304_05445 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GN304_08075 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GN304_00945 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D GN304_04385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_02710 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_03870 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GN304_07960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GN304_00085 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:bob00910]
D GN304_00135 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GN304_03385 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GN304_03380 NAD(P)-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GN304_03085 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bob00920]
D GN304_00845 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D GN304_01215 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D GN304_01210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GN304_06325 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D GN304_01205 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D GN304_00825 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D GN304_06910 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GN304_02220 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GN304_00855 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GN304_05985 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GN304_02465 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bob00061]
D GN304_03120 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GN304_02095 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GN304_02100 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GN304_01245 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GN304_00920 acyl carrier protein K02078 acpP; acyl carrier protein
D GN304_04780 acyl carrier protein K02078 acpP; acyl carrier protein
D GN304_04710 acyl carrier protein K02078 acpP; acyl carrier protein
D GN304_04790 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GN304_05495 fabH; beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GN304_00895 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GN304_04775 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GN304_03590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_04785 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_03245 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GN304_04990 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GN304_05230 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bob00561]
D GN304_01720 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GN304_07350 alcohol dehydrogenase catalytic domain-containing protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D GN304_02665 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D GN304_05500 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GN304_02030 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GN304_06230 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GN304_06280 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:bob00564]
D GN304_03515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GN304_02030 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GN304_06230 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GN304_06280 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GN304_03435 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D GN304_03215 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GN304_06270 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GN304_06265 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GN304_03850 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D GN304_03990 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D GN304_07455 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bob00230]
D GN304_08625 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GN304_02330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GN304_02830 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GN304_03700 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GN304_04135 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D GN304_04120 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D GN304_04130 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GN304_03705 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GN304_04485 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D GN304_04490 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GN304_04115 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GN304_04110 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GN304_06845 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GN304_01410 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GN304_00280 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GN304_03955 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GN304_03695 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GN304_01195 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GN304_05805 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D GN304_03755 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GN304_08490 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GN304_04980 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GN304_00215 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GN304_04975 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GN304_02935 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D GN304_03175 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GN304_03720 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GN304_04835 GAF domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D GN304_07950 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GN304_06945 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D GN304_06025 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D GN304_06550 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GN304_01215 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D GN304_01210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:bob00240]
D GN304_06410 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GN304_06405 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GN304_02040 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GN304_05075 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GN304_02035 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GN304_07670 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D GN304_04960 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GN304_04420 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GN304_03200 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GN304_03695 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GN304_08655 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GN304_08785 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GN304_04025 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GN304_07780 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GN304_06025 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D GN304_01375 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D GN304_04980 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GN304_00215 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GN304_04975 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GN304_05140 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GN304_04630 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GN304_08085 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D GN304_08450 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-]
D GN304_07920 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D GN304_08065 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bob00250]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_06250 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GN304_02695 type II asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GN304_06145 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GN304_05110 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GN304_07950 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GN304_04110 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GN304_02040 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GN304_08240 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GN304_03385 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GN304_03380 NAD(P)-binding protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GN304_00590 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D GN304_00135 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GN304_06410 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GN304_06405 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GN304_04130 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GN304_04685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GN304_02330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bob00260]
D GN304_05235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GN304_01295 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GN304_00950 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GN304_05825 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D GN304_03465 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GN304_01660 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D GN304_04180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GN304_01720 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GN304_04385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_02710 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_03870 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GN304_07960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GN304_00085 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D GN304_07920 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D GN304_02300 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D GN304_00120 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_06270 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GN304_01500 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GN304_06420 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GN304_01275 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GN304_01280 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bob00270]
D GN304_06910 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GN304_02220 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GN304_00855 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GN304_03860 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GN304_07740 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GN304_01335 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GN304_00105 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GN304_00110 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GN304_03585 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D GN304_00280 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GN304_01260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GN304_01110 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D GN304_03500 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D GN304_00040 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GN304_05235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GN304_01295 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GN304_00950 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GN304_05985 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GN304_08470 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GN304_02465 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D GN304_07605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GN304_05030 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GN304_03425 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_01500 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GN304_03870 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GN304_07960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bob00280]
D GN304_07605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_03160 NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bob00290]
D GN304_06420 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GN304_05905 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GN304_05900 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GN304_05895 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GN304_00095 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_05620 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_00100 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GN304_04610 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GN304_07605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GN304_02855 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bob00300]
D GN304_00950 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GN304_05235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GN304_01295 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GN304_08260 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GN304_03890 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GN304_01345 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GN304_03295 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D GN304_08175 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GN304_03300 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GN304_07935 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GN304_03735 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GN304_05675 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GN304_05680 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bob00310]
D GN304_00030 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_08240 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GN304_06075 lysine-2,3-aminomutase-like protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:bob00220]
D GN304_08180 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GN304_06145 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GN304_05110 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GN304_04130 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GN304_00135 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GN304_06410 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GN304_06405 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_02505 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D GN304_03290 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GN304_07970 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GN304_08175 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:bob00330]
D GN304_08380 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D GN304_02070 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D GN304_00110 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GN304_00105 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GN304_00260 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GN304_00590 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D GN304_02745 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bob00340]
D GN304_08485 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GN304_07955 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D GN304_01580 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D GN304_04845 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D GN304_01590 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D GN304_01595 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GN304_01585 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D GN304_01600 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D GN304_02605 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GN304_03875 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D GN304_08480 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:bob00350]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_02605 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GN304_01260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GN304_08240 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:bob00360]
D GN304_01135 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_02605 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GN304_01260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GN304_01095 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:bob00380]
D GN304_00030 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_01565 alpha-keto acid decarboxylase family protein K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D GN304_01255 alpha-keto acid decarboxylase family protein K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D GN304_00050 catalase K03781 katE; catalase [EC:1.11.1.6]
D GN304_08230 catalase K03781 katE; catalase [EC:1.11.1.6]
D GN304_01095 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bob00400]
D GN304_03005 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GN304_03105 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D GN304_02090 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D GN304_05095 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D GN304_07785 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D GN304_04985 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GN304_04045 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GN304_04050 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GN304_04055 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D GN304_04415 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D GN304_04060 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D GN304_01275 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GN304_01280 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GN304_04930 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D GN304_03785 prephenate dehydrogenase/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D GN304_03885 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_02605 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GN304_01260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GN304_00930 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D GN304_02660 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:bob00430]
D GN304_00980 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_07825 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_00845 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
C 00440 Phosphonate and phosphinate metabolism
D GN304_05120 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:bob00450]
D GN304_03860 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GN304_07740 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GN304_01110 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D GN304_05415 sufS; SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D GN304_05540 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GN304_07510 ferredoxin--NADP(+) reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GN304_01215 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D GN304_01210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GN304_05130 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bob00460]
D GN304_00980 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_07825 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_02695 type II asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GN304_04180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bob00470]
D GN304_04700 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GN304_05715 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GN304_04130 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GN304_04965 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GN304_05690 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GN304_07935 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GN304_03735 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bob00480]
D GN304_00980 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_07825 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_05030 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GN304_03425 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GN304_03665 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GN304_06320 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GN304_06740 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GN304_02990 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D GN304_02625 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GN304_05640 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GN304_03510 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D GN304_02070 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D GN304_00110 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bob00540]
D GN304_03250 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GN304_05735 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GN304_03240 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GN304_03255 DUF1009 domain-containing protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GN304_06160 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GN304_05000 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GN304_03365 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GN304_04020 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GN304_03880 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GN304_04995 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GN304_05005 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GN304_03315 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D GN304_00270 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D GN304_05080 glycosyltransferase family 9 protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bob00541]
D GN304_05270 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GN304_03575 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GN304_07115 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GN304_08405 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GN304_00330 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GN304_08535 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GN304_08540 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GN304_08530 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GN304_08525 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GN304_08545 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D GN304_05265 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D GN304_04680 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GN304_03675 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:bob00550]
D GN304_01380 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GN304_05710 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GN304_05705 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GN304_05690 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GN304_05675 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GN304_05715 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GN304_05680 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GN304_03210 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GN304_05170 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GN304_05685 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GN304_05700 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GN304_01185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GN304_02875 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GN304_05670 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GN304_05145 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bob00552]
D GN304_05170 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bob00543]
D GN304_06910 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bob00730]
D GN304_00570 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_00575 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_06130 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GN304_06055 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D GN304_04575 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D GN304_06550 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bob00740]
D GN304_08575 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GN304_08585 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GN304_08570 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GN304_08580 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GN304_08150 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:bob00750]
D GN304_02185 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D GN304_07960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GN304_04440 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D GN304_04445 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D GN304_03465 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bob00760]
D GN304_06250 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GN304_06245 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D GN304_06255 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D GN304_03010 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D GN304_00300 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GN304_00240 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D GN304_05770 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D GN304_06835 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GN304_08240 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bob00770]
D GN304_00095 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_05620 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GN304_00100 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GN304_04610 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GN304_00115 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GN304_02660 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GN304_05340 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D GN304_04635 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GN304_01075 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GN304_05090 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GN304_03180 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GN304_07605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:bob00780]
D GN304_00385 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D GN304_00895 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GN304_04775 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GN304_03590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_04785 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_03245 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GN304_04990 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GN304_00390 biotin synthase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D GN304_00395 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GN304_04715 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GN304_00400 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GN304_00380 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D GN304_04810 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D GN304_05345 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bob00785]
D GN304_05280 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D GN304_04085 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_04065 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GN304_04070 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GN304_04075 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GN304_01285 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GN304_00030 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GN304_00120 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
C 00790 Folate biosynthesis [PATH:bob00790]
D GN304_01000 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D GN304_00995 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D GN304_00990 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GN304_01240 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GN304_08575 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GN304_01065 anthranilate synthase component I family protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D GN304_01005 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GN304_01015 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GN304_01010 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GN304_07525 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:bob00670]
D GN304_01665 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GN304_04180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GN304_03700 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GN304_06845 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GN304_03325 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GN304_00120 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GN304_08085 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D GN304_07730 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GN304_06030 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bob00860]
D GN304_02300 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D GN304_03020 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_02045 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_04160 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GN304_03525 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GN304_03530 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D GN304_08780 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GN304_03580 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D GN304_03950 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D GN304_08770 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D GN304_01300 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GN304_00815 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D GN304_03445 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GN304_05300 AAA domain-containing protein K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D GN304_05305 cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D GN304_08830 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D GN304_04400 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bob00130]
D GN304_00930 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D GN304_05040 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D GN304_05240 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D GN304_06905 ubiquinone biosynthesis protein UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D GN304_04640 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GN304_00070 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bob00900]
D GN304_06130 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GN304_03220 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GN304_02455 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D GN304_06885 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D GN304_05220 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GN304_05830 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GN304_06125 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GN304_04970 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GN304_03210 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:bob00909]
D GN304_03820 shc; squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GN304_02615 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bob00523]
D GN304_08535 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GN304_08540 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GN304_08530 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GN304_08525 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D GN304_08540 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
D GN304_02745 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bob00261]
D GN304_01215 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D GN304_01210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GN304_05235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GN304_01295 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GN304_08260 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GN304_03890 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GN304_01345 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bob00521]
D GN304_04590 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GN304_06085 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GN304_04760 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GN304_08535 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GN304_08540 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GN304_08530 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GN304_08525 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D GN304_04590 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:bob00525]
D GN304_08535 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GN304_08540 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bob00401]
D GN304_03785 prephenate dehydrogenase/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_02605 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GN304_01260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GN304_04045 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GN304_04050 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GN304_04790 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GN304_03590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_04785 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_04990 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GN304_00920 acyl carrier protein K02078 acpP; acyl carrier protein
D GN304_04780 acyl carrier protein K02078 acpP; acyl carrier protein
D GN304_04710 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bob00999]
D GN304_01335 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GN304_05095 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D GN304_01135 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bob00625]
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:bob00633]
D GN304_04405 nfsB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D GN304_07375 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D GN304_02700 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:bob00626]
D GN304_04855 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bob03020]
D GN304_06685 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GN304_06680 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GN304_06535 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GN304_03170 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bob03010]
D GN304_07775 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GN304_03830 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GN304_06625 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GN304_03070 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GN304_06570 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GN304_06375 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GN304_06670 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GN304_06585 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GN304_07610 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GN304_06660 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GN304_06540 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GN304_06675 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GN304_06545 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GN304_06590 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GN304_02170 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GN304_05925 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GN304_06610 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GN304_06370 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GN304_06635 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GN304_04650 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GN304_05525 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GN304_06700 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GN304_06640 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GN304_06655 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GN304_06650 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GN304_06595 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GN304_06580 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GN304_06690 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GN304_06365 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GN304_06695 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GN304_06705 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GN304_07615 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GN304_06605 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GN304_06560 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GN304_06620 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GN304_06530 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GN304_06575 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GN304_05910 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GN304_06175 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GN304_05590 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GN304_06630 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GN304_06645 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GN304_06600 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GN304_00285 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D GN304_05595 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GN304_05460 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GN304_06615 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GN304_06565 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GN304_04500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GN304_05505 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GN304_04000 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GN304_03265 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GN304_06180 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GN304_01045 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GN304_06020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GN304_00700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GN304_00350 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bob00970]
D GN304_08790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_00155 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_00345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_00695 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_06010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_07895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_02805 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_03740 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_03745 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_05795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_05810 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GN304_05815 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GN304_01020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GN304_04595 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GN304_00250 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GN304_03940 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GN304_03945 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GN304_00935 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GN304_01570 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GN304_07995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_02470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_08000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_00650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_07625 tRNA-His K14226 tRNA-His; tRNA His
D GN304_00340 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_00690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_06015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_07900 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_07595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_05380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_01090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_03375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_05275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_07965 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_08860 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GN304_01085 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GN304_00360 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_00710 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_05190 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_05995 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_07880 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_07985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GN304_08670 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GN304_05800 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GN304_01310 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GN304_05480 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GN304_04265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_04410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_05585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_05940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_06975 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GN304_00615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GN304_07430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GN304_00645 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GN304_07365 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GN304_04230 tRNA-Val K14237 tRNA-Val; tRNA Val
D GN304_05350 tRNA-Val K14237 tRNA-Val; tRNA Val
D GN304_04200 tRNA-Val K14237 tRNA-Val; tRNA Val
D GN304_03020 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_02045 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_04255 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GN304_04260 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GN304_04250 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GN304_03090 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GN304_02915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GN304_02895 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GN304_02890 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GN304_07720 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GN304_02970 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GN304_03035 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GN304_05130 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GN304_03325 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GN304_04605 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GN304_06795 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GN304_08145 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GN304_03610 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D GN304_02940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GN304_05330 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GN304_05215 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GN304_06170 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GN304_06165 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GN304_00560 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GN304_06155 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bob03060]
D GN304_06555 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GN304_00640 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GN304_04030 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GN304_04520 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GN304_04515 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GN304_03150 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GN304_03280 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GN304_02515 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GN304_03535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GN304_05930 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GN304_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GN304_08155 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GN304_02960 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GN304_02965 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D GN304_03185 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GN304_08140 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bob04122]
D GN304_00570 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_00575 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_00585 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bob03018]
D GN304_06440 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GN304_02845 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D GN304_04010 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GN304_02175 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GN304_05975 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GN304_04185 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GN304_07925 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GN304_04555 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GN304_00015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GN304_05335 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GN304_01355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GN304_03600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GN304_07640 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GN304_03715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GN304_06450 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bob03030]
D GN304_05085 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GN304_05315 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GN304_07815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GN304_05135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GN304_06785 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GN304_06315 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GN304_04660 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GN304_01235 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GN304_06385 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GN304_08290 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GN304_05820 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GN304_06495 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GN304_02815 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GN304_05750 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bob03410]
D GN304_02060 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GN304_00075 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GN304_04645 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GN304_08645 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GN304_06880 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GN304_03975 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GN304_02925 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GN304_02815 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GN304_00940 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GN304_05750 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bob03420]
D GN304_03910 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GN304_08295 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GN304_07355 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D GN304_03410 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GN304_03985 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GN304_04470 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GN304_02815 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GN304_05750 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bob03430]
D GN304_03495 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GN304_08130 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GN304_04470 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GN304_02835 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GN304_06120 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GN304_00940 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GN304_08290 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GN304_05315 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GN304_04660 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GN304_07815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GN304_06785 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GN304_05135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GN304_05085 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GN304_06315 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GN304_05750 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bob03440]
D GN304_00940 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GN304_08290 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GN304_04665 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GN304_03840 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GN304_07805 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GN304_00975 recA; recombinase RecA K03553 recA; recombination protein RecA
D GN304_02815 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GN304_02530 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GN304_02535 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GN304_02525 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GN304_03905 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GN304_05315 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GN304_04660 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GN304_07815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GN304_06785 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GN304_05135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GN304_05085 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GN304_06315 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GN304_01035 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bob02010]
D GN304_04795 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D GN304_06925 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GN304_07450 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GN304_05165 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_00220 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_04820 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_00165 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_08415 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GN304_00175 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GN304_04830 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GN304_08420 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GN304_00170 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GN304_04825 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GN304_08390 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D GN304_00470 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GN304_00475 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GN304_00480 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GN304_01125 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GN304_01115 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein
D GN304_01120 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D GN304_04330 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D GN304_04335 capsule biosynthesis protein K09688 kpsM; capsular polysaccharide transport system permease protein
D GN304_04340 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D GN304_05325 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D GN304_05320 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GN304_02390 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D GN304_02395 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D GN304_02105 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D GN304_06335 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D GN304_04735 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D GN304_06340 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D GN304_04740 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D GN304_03350 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GN304_06220 hypothetical protein K09811 ftsX; cell division transport system permease protein
D GN304_06215 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D GN304_06445 ATP-binding cassette domain-containing protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GN304_00425 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D GN304_08740 ATP-binding cassette domain-containing protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GN304_04545 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GN304_04540 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:bob03070]
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_00430 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D GN304_00425 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D GN304_04520 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GN304_04515 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GN304_00640 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GN304_04030 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GN304_06555 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GN304_03150 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GN304_03280 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GN304_02515 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GN304_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GN304_03535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GN304_05930 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GN304_08155 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GN304_02960 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GN304_02965 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D GN304_00740 VWA domain-containing protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bob02020]
D GN304_01515 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GN304_01520 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GN304_08390 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D GN304_06960 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01425 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01655 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_06510 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D GN304_06515 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump
D GN304_01470 nodulation protein K07789 mdtC; multidrug efflux pump
D GN304_06520 MMPL family transporter K07789 mdtC; multidrug efflux pump
D GN304_05575 flagellin C K02406 fliC; flagellin
D GN304_07315 flagellin C K02406 fliC; flagellin
D GN304_07135 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GN304_04655 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GN304_03615 lysylphosphatidylglycerol synthetase family protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D GN304_07700 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D GN304_07705 response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D GN304_02355 maeA; oxaloacetate-decarboxylating malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GN304_03490 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D GN304_07655 nitrogen assimilation regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D GN304_00135 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GN304_07650 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GN304_07645 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D GN304_07015 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GN304_02675 globin-coupled sensor protein K03406 mcp; methyl-accepting chemotaxis protein
D GN304_07040 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GN304_07020 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GN304_07025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GN304_07005 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07010 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GN304_07335 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D GN304_02590 response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D GN304_01465 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D GN304_01460 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GN304_01455 ubiquinol-cytochrome C reductase K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D GN304_00005 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GN304_00010 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_08365 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D GN304_04325 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D GN304_06820 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:bob04148]
D GN304_02070 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D GN304_01465 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bob02024]
D GN304_07640 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GN304_04045 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GN304_04050 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GN304_03005 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GN304_07580 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D GN304_07690 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GN304_08585 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GN304_00510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GN304_03280 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GN304_00640 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GN304_04030 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GN304_06555 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GN304_03150 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GN304_02515 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GN304_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GN304_03535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GN304_05930 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bob02030]
D GN304_02675 globin-coupled sensor protein K03406 mcp; methyl-accepting chemotaxis protein
D GN304_07040 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GN304_07025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GN304_07020 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GN304_07005 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07035 hypothetical protein K03409 cheX; chemotaxis protein CheX
D GN304_07010 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GN304_07000 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D GN304_07015 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GN304_07235 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GN304_07325 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GN304_07225 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GN304_07135 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GN304_07140 OmpA family protein K02557 motB; chemotaxis protein MotB
D GN304_06100 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bob02040]
D GN304_07075 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GN304_07240 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GN304_07235 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GN304_07155 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GN304_07150 hypothetical protein K02413 fliJ; flagellar protein FliJ
D GN304_07330 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GN304_07325 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GN304_07225 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GN304_07220 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D GN304_07215 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GN304_07080 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GN304_07085 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR
D GN304_07205 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GN304_07090 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GN304_07265 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D GN304_07060 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GN304_07055 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GN304_07125 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D GN304_07095 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D GN304_07275 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D GN304_07270 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GN304_07260 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D GN304_07185 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GN304_07180 chemotaxis protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D GN304_07280 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GN304_07285 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D GN304_05575 flagellin C K02406 fliC; flagellin
D GN304_07315 flagellin C K02406 fliC; flagellin
D GN304_07135 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GN304_07140 OmpA family protein K02557 motB; chemotaxis protein MotB
D GN304_06100 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D GN304_06380 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GN304_04010 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bob01501]
D GN304_00500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GN304_00505 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GN304_00510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_01185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GN304_02875 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GN304_05670 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bob01502]
D GN304_05715 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GN304_04700 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GN304_05680 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GN304_05685 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GN304_05700 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bob01503]
D GN304_02850 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GN304_06960 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01425 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01655 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_00500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GN304_00505 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_03250 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GN304_03615 lysylphosphatidylglycerol synthetase family protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bob01000]
C 01001 Protein kinases [BR:bob01001]
D GN304_00740 VWA domain-containing protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D GN304_01515 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GN304_07700 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D GN304_07650 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GN304_06205 hybrid sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D GN304_07025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bob01009]
D GN304_00040 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GN304_08695 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GN304_00085 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:bob01002]
D GN304_08140 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GN304_03755 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GN304_08740 ATP-binding cassette domain-containing protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GN304_02330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GN304_03385 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GN304_04685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GN304_03390 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D GN304_04800 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D GN304_07755 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GN304_03665 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GN304_06320 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GN304_03980 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D GN304_03300 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GN304_07830 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GN304_04460 M24 family metallopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GN304_02600 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D GN304_02580 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GN304_03225 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GN304_08170 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D GN304_06960 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01425 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01655 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01055 prolyl oligopeptidase family serine peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D GN304_05145 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GN304_00965 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GN304_05370 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GN304_05360 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GN304_01975 helix-turn-helix transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D GN304_03185 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GN304_02015 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GN304_06435 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GN304_00980 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_07825 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GN304_03455 TldD/PmbA family protein K03592 pmbA; PmbA protein
D GN304_00140 tldD; metalloprotease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:bob01003]
D GN304_08520 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D GN304_07455 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D GN304_01185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GN304_08360 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D GN304_00370 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bob01005]
D GN304_03250 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GN304_06160 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GN304_05735 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GN304_03240 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GN304_03255 DUF1009 domain-containing protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GN304_05000 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GN304_05005 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GN304_04995 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GN304_04020 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GN304_03880 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GN304_03365 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GN304_05080 glycosyltransferase family 9 protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D GN304_03315 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D GN304_00270 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bob01011]
D GN304_01380 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GN304_05710 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GN304_05705 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GN304_05690 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GN304_05675 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GN304_05715 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GN304_04700 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GN304_04965 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GN304_05685 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GN304_05700 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GN304_05170 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GN304_03505 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GN304_01185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GN304_02875 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GN304_05670 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GN304_05145 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GN304_04100 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GN304_06875 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GN304_03545 murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D GN304_05150 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D GN304_04770 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D GN304_02085 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GN304_02850 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bob01004]
D GN304_04790 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GN304_05495 fabH; beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GN304_00895 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GN304_04775 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GN304_03590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_04785 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GN304_03245 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GN304_04990 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GN304_05230 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D GN304_08335 SDR family NAD(P)-dependent oxidoreductase K12431 pks2; phthioceranic/hydroxyphthioceranic acid synthase [EC:2.3.1.287]
D GN304_04705 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D GN304_05500 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GN304_02030 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GN304_06230 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bob01006]
D GN304_06125 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GN304_04970 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GN304_03210 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GN304_00090 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GN304_05040 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D GN304_03445 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bob01007]
D GN304_03610 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D GN304_03020 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_02045 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_00560 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GN304_06155 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GN304_03035 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GN304_02940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GN304_05130 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GN304_08145 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GN304_04605 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GN304_06795 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GN304_02915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GN304_05215 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GN304_02895 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GN304_02890 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GN304_02970 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GN304_05330 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GN304_07720 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GN304_03090 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GN304_06170 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GN304_06165 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GN304_05885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_05890 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GN304_00955 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D GN304_01260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GN304_02605 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GN304_02300 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D GN304_00395 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GN304_04715 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GN304_08175 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GN304_00400 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GN304_07605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GN304_07960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GN304_03675 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bob00194]
D GN304_00680 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GN304_00675 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GN304_00670 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GN304_00665 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GN304_00660 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GN304_00190 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GN304_00195 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GN304_00205 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GN304_00210 F0F1 ATP synthase assembly protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bob03000]
D GN304_00595 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D GN304_00875 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D GN304_08250 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D GN304_01680 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D GN304_08045 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GN304_07690 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GN304_08595 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D GN304_03920 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D GN304_05345 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GN304_00590 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D GN304_08865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GN304_04865 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D GN304_07915 hypothetical protein K07735 algH; putative transcriptional regulator
D GN304_07435 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GN304_04565 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D GN304_05655 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bob03021]
D GN304_06535 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GN304_06685 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GN304_06680 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GN304_03170 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GN304_06380 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GN304_07395 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D GN304_02145 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GN304_04570 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GN304_00635 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GN304_07435 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GN304_06415 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GN304_03420 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D GN304_00015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bob03019]
D GN304_02845 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D GN304_03190 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GN304_05335 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GN304_05975 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GN304_04185 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GN304_07925 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GN304_04555 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GN304_04010 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GN304_02175 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GN304_00015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GN304_01355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GN304_03600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GN304_07640 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GN304_03715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GN304_06450 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D GN304_06440 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GN304_07695 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D GN304_01415 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:bob03011]
D GN304_07775 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GN304_03830 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GN304_06625 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GN304_03070 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GN304_06570 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GN304_06375 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GN304_06670 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GN304_06585 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GN304_07610 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GN304_06660 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GN304_06540 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GN304_06675 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GN304_06545 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GN304_06590 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GN304_02170 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GN304_05925 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GN304_06610 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GN304_06370 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GN304_06635 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GN304_04650 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GN304_05525 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GN304_06700 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GN304_06640 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GN304_06655 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GN304_06650 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GN304_06595 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GN304_06580 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GN304_06365 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GN304_06695 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GN304_06705 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GN304_06690 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GN304_07615 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GN304_06605 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GN304_06560 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GN304_06620 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GN304_06530 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GN304_06575 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GN304_05910 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GN304_06175 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GN304_05590 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GN304_06630 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GN304_06645 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GN304_06600 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GN304_05595 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GN304_05460 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GN304_06615 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GN304_06565 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GN304_04500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GN304_05505 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GN304_04000 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GN304_03265 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GN304_06180 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GN304_01045 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GN304_00285 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D GN304_06020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GN304_00700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GN304_00350 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bob03009]
D GN304_03190 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GN304_03195 GTPase Era K03595 era; GTPase
D GN304_05600 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D GN304_07435 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GN304_02145 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GN304_04570 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GN304_00635 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GN304_06355 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GN304_03960 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GN304_02215 rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GN304_01630 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GN304_05035 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GN304_08875 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GN304_05660 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GN304_05020 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GN304_06135 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GN304_07370 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GN304_03930 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D GN304_00310 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GN304_06140 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GN304_05400 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GN304_01620 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GN304_01635 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GN304_02440 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D GN304_07390 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GN304_08055 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GN304_05920 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D GN304_04465 methyltransferase domain-containing protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GN304_02845 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D GN304_04245 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GN304_07925 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GN304_05055 ribosome biogenesis GTPase Der K03977 engA; GTPase
D GN304_07635 hflX; GTPase HflX K03665 hflX; GTPase
D GN304_06330 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GN304_03175 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GN304_02160 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D GN304_02140 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D GN304_00305 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D GN304_04905 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D GN304_00295 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bob03016]
D GN304_03020 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_02045 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_05330 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GN304_08145 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GN304_06795 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GN304_05130 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GN304_02940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GN304_02915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GN304_03090 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GN304_07720 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GN304_02970 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GN304_03035 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GN304_04605 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GN304_05215 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GN304_06170 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GN304_06165 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GN304_00560 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GN304_06155 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GN304_01575 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GN304_01330 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GN304_03320 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GN304_02165 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GN304_00570 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_00575 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_06330 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GN304_00090 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GN304_08885 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GN304_08880 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GN304_06325 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D GN304_03270 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GN304_01190 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GN304_03370 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D GN304_07485 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D GN304_03620 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D GN304_07980 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D GN304_03610 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D GN304_02895 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GN304_02890 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GN304_01480 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D GN304_01640 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GN304_07660 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GN304_04895 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GN304_07940 MiaB/RimO family radical SAM methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D GN304_03030 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D GN304_05915 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GN304_01620 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GN304_00585 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GN304_05405 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D GN304_06930 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GN304_01010 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GN304_01005 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GN304_01015 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GN304_07525 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GN304_01715 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D GN304_06935 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GN304_02575 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GN304_08060 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GN304_03520 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GN304_07505 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GN304_02175 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bob03012]
D GN304_02155 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GN304_07725 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GN304_03690 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GN304_03835 elongation factor Ts K02357 tsf; elongation factor Ts
D GN304_06665 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GN304_05455 fusA; elongation factor G K02355 fusA; elongation factor G
D GN304_05210 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GN304_03205 ribosome recycling factor K02838 frr; ribosome recycling factor
D GN304_05200 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GN304_00290 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GN304_08650 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GN304_06080 efp; elongation factor P K02356 efp; elongation factor P
D GN304_06070 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D GN304_01180 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GN304_03075 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:bob03110]
D GN304_07845 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D GN304_07910 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GN304_05365 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GN304_08695 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GN304_01355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GN304_03600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GN304_01350 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GN304_06955 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein
D GN304_08185 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D GN304_07710 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GN304_03655 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D GN304_03595 co-chaperone GroES K04078 groES; chaperonin GroES
D GN304_06960 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01425 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_01655 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GN304_02580 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GN304_00205 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GN304_03535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GN304_04560 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D GN304_04040 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D GN304_06150 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D GN304_02510 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D GN304_06350 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D GN304_07490 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D GN304_08005 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D GN304_05255 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D GN304_04145 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D GN304_02375 redoxin domain-containing protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:bob04131]
D GN304_03695 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GN304_07405 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GN304_04385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_02710 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_03780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GN304_08695 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:bob03051]
D GN304_08695 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bob03032]
D GN304_05820 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GN304_05355 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GN304_05490 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GN304_05550 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GN304_04655 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GN304_01235 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GN304_06385 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GN304_08290 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GN304_05315 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GN304_04660 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GN304_06315 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GN304_06785 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GN304_05135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GN304_05085 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GN304_07815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GN304_06495 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GN304_02815 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GN304_05750 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GN304_01070 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GN304_04670 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GN304_03845 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GN304_01990 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GN304_02020 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bob03036]
D GN304_03190 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GN304_05355 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GN304_05490 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GN304_05550 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GN304_04655 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GN304_00460 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D GN304_07640 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GN304_00875 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D GN304_04920 AAA family ATPase K03529 smc; chromosome segregation protein
D GN304_02950 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D GN304_02955 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D GN304_05725 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GN304_06215 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D GN304_05670 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GN304_01625 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GN304_05720 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D GN304_05695 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D GN304_06220 hypothetical protein K09811 ftsX; cell division transport system permease protein
D GN304_05730 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GN304_06040 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D GN304_02850 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GN304_00500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GN304_06745 minC; septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D GN304_06750 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GN304_06755 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D GN304_02860 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GN304_02865 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GN304_02880 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GN304_08870 AAA family ATPase K03496 parA; chromosome partitioning protein
D GN304_08865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GN304_03845 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GN304_01990 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GN304_08880 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GN304_08875 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GN304_01030 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D GN304_03115 tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D GN304_06965 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GN304_03285 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bob03400]
D GN304_08890 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GN304_00075 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GN304_02060 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GN304_03135 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GN304_04630 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GN304_01490 alkB; DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D GN304_06880 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GN304_08645 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GN304_04645 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GN304_03975 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GN304_02925 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GN304_00940 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GN304_05750 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GN304_02815 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GN304_08295 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GN304_07355 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D GN304_03410 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GN304_03985 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GN304_04470 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GN304_06685 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GN304_06680 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GN304_06535 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GN304_03170 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GN304_03910 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GN304_03495 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GN304_08130 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GN304_02835 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GN304_06120 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GN304_05315 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GN304_04660 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GN304_06315 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GN304_06785 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GN304_05135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GN304_05085 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GN304_07815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GN304_08290 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GN304_00975 recA; recombinase RecA K03553 recA; recombination protein RecA
D GN304_02530 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GN304_02535 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GN304_02525 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GN304_01035 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GN304_08425 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GN304_04665 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GN304_03905 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GN304_03840 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GN304_07805 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GN304_05745 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GN304_07495 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D GN304_07500 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D GN304_07870 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GN304_00795 cas1e; type I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GN304_01070 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GN304_04670 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GN304_02020 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GN304_05355 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GN304_05490 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GN304_05550 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GN304_04555 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GN304_01980 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GN304_01975 helix-turn-helix transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D GN304_08165 regulatory protein RecX K03565 recX; regulatory protein
D GN304_03605 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GN304_01395 NUDIX domain-containing protein K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D GN304_04980 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GN304_00215 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GN304_04975 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bob03029]
D GN304_01460 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GN304_02155 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GN304_07725 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GN304_03835 elongation factor Ts K02357 tsf; elongation factor Ts
D GN304_06665 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GN304_05455 fusA; elongation factor G K02355 fusA; elongation factor G
D GN304_03660 DNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D GN304_02980 RNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D GN304_03195 GTPase Era K03595 era; GTPase
D GN304_00560 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GN304_06795 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GN304_02915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GN304_02940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GN304_04255 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GN304_04260 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GN304_04250 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GN304_08290 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GN304_03230 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GN304_01355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GN304_07710 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GN304_03600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GN304_03595 co-chaperone GroES K04078 groES; chaperonin GroES
D GN304_01350 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GN304_00570 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_00575 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_04145 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D GN304_04840 folate-binding protein K22073 IBA57; transferase CAF17, mitochondrial [EC:2.1.-.-]
D GN304_05290 BolA/IbaG family iron-sulfur metabolism protein K22066 BOLA1; BolA-like protein 1
D GN304_06965 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GN304_03445 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GN304_03280 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GN304_02820 SCO family protein K07152 SCO1; protein SCO1
D GN304_08695 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bob02000]
D GN304_06445 ATP-binding cassette domain-containing protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GN304_00425 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D GN304_08740 ATP-binding cassette domain-containing protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GN304_05465 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D GN304_02065 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D GN304_04545 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GN304_04540 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D GN304_04535 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D GN304_07580 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D GN304_04795 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D GN304_04625 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D GN304_04620 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D GN304_05165 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_00220 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_04820 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_00165 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GN304_08415 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GN304_00175 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GN304_04830 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GN304_08420 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GN304_00170 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GN304_04825 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GN304_00160 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D GN304_06925 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GN304_07450 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GN304_08390 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D GN304_00470 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GN304_00475 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GN304_00480 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GN304_01125 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GN304_01115 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein
D GN304_01120 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D GN304_02120 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D GN304_03560 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GN304_03565 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D GN304_03570 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GN304_08810 ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D GN304_08820 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D GN304_08815 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D GN304_04335 capsule biosynthesis protein K09688 kpsM; capsular polysaccharide transport system permease protein
D GN304_04330 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D GN304_04340 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D GN304_06335 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D GN304_04735 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D GN304_06340 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D GN304_04740 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D GN304_03350 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GN304_05325 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D GN304_05320 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GN304_02390 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D GN304_02395 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D GN304_02105 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D GN304_06220 hypothetical protein K09811 ftsX; cell division transport system permease protein
D GN304_06215 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D GN304_00730 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GN304_00735 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GN304_05425 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GN304_08685 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D GN304_03040 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D GN304_08755 multidrug transporter K26937 dinF; MATE family, multidrug efflux pump
D GN304_05050 sugar porter family MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D GN304_07680 sugar porter family MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D GN304_07685 sugar porter family MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D GN304_02295 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D GN304_01405 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D GN304_02740 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D GN304_03065 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D GN304_06860 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D GN304_01675 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D GN304_05045 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D GN304_08430 porin K06188 aqpZ; aquaporin Z
D GN304_03025 ATP-sensitive potassium channel protein K08715 IRPC; inward rectifier potassium channel
D GN304_06895 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D GN304_06740 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GN304_04505 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D GN304_01725 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D GN304_01150 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D GN304_07135 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GN304_07140 OmpA family protein K02557 motB; chemotaxis protein MotB
D GN304_06100 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D GN304_01170 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GN304_01160 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GN304_01165 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GN304_02545 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D GN304_02550 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D GN304_00045 magnesium transporter K16074 zntB; zinc transporter
D GN304_04860 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D GN304_07440 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GN304_05765 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GN304_03100 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D GN304_02005 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D GN304_01545 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D GN304_02290 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D GN304_02335 autotransporter domain-containing protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D GN304_06770 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D GN304_06775 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D GN304_06780 TonB-dependent receptor plug domain-containing protein K16090 fiu; catecholate siderophore receptor
D GN304_06760 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_08310 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_03485 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_02480 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_00530 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_00810 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_00835 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_03140 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_06285 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_06710 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
D GN304_08225 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
D GN304_00510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GN304_08365 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D GN304_04325 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D GN304_06985 carbohydrate porin K07267 oprB; porin
D GN304_01695 carbohydrate porin K07267 oprB; porin
D GN304_07535 carbohydrate porin K07267 oprB; porin
D GN304_02775 carbohydrate porin K07267 oprB; porin
D GN304_03230 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GN304_05060 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D GN304_05740 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D GN304_04885 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D GN304_04880 hypothetical protein K09800 tamB; translocation and assembly module TamB
D GN304_03355 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D GN304_03360 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D GN304_06345 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D GN304_06790 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D GN304_04910 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D GN304_02765 amino acid permease K11735 gabP; GABA permease
D GN304_00840 amino acid permease K11735 gabP; GABA permease
D GN304_00490 amino acid permease K11738 ansP; L-asparagine permease
D GN304_02280 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D GN304_08610 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D GN304_00505 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GN304_06515 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump
D GN304_01470 nodulation protein K07789 mdtC; multidrug efflux pump
D GN304_06520 MMPL family transporter K07789 mdtC; multidrug efflux pump
D GN304_08300 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump
D GN304_02770 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D GN304_01775 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D GN304_01710 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D GN304_04690 cyclic nucleotide-binding domain-containing protein K03316 nhaP; Na+:H+ antiporter
D GN304_06115 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GN304_03305 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D GN304_02270 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D GN304_05450 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family
D GN304_07630 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D GN304_08455 mntH; Mn(2+) uptake NRAMP transporter MntH K03322 mntH; manganese transport protein
D GN304_03505 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GN304_06815 permease K13936 mdcF; malonate transporter and related proteins
D GN304_02205 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D GN304_00870 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D GN304_01650 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D GN304_01645 AzlD family protein K26606 azlD; branched chain amino acid efflux pump
D GN304_03055 hypothetical protein K15547 mdtO; multidrug resistance protein MdtO
D GN304_05695 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D GN304_02785 Dyp-type peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D GN304_01175 TonB family protein K03832 tonB; periplasmic protein TonB
D GN304_08640 TonB family protein K03832 tonB; periplasmic protein TonB
D GN304_02565 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D GN304_02560 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein
D GN304_06855 HlyD family efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D GN304_01670 biotin/lipoyl-binding protein K03543 emrA; membrane fusion protein, multidrug efflux system
D GN304_03050 mdtN; multidrug transporter subunit MdtN K15549 mdtN; membrane fusion protein, multidrug efflux system
D GN304_08605 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D GN304_00430 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D GN304_08745 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D GN304_00500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GN304_06510 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D GN304_00520 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D GN304_02380 nrfE; heme lyase NrfEFG subunit NrfE K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:bob02044]
D GN304_00425 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D GN304_00430 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_08745 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D GN304_08740 ATP-binding cassette domain-containing protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D GN304_00150 YggT family protein K02221 yggT; YggT family protein
D GN304_02050 transporter K02238 comEC; competence protein ComEC
D GN304_07205 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GN304_07090 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GN304_07240 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GN304_07155 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GN304_07225 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GN304_07220 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D GN304_07215 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GN304_07080 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GN304_07085 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR
D GN304_00740 VWA domain-containing protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D GN304_02515 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GN304_03535 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GN304_04520 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GN304_00640 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GN304_04515 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GN304_04030 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GN304_06555 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GN304_05930 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GN304_07945 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GN304_03150 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GN304_03280 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GN304_08155 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GN304_02960 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GN304_02965 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bob02042]
D GN304_07440 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GN304_05765 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:bob02022]
D GN304_01515 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GN304_01520 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GN304_07700 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D GN304_07705 response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D GN304_06730 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D GN304_01445 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D GN304_07655 nitrogen assimilation regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D GN304_07650 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GN304_07645 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D GN304_06205 hybrid sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D GN304_07025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GN304_07005 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07010 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GN304_07335 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D GN304_02590 response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
C 02035 Bacterial motility proteins [BR:bob02035]
D GN304_07025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GN304_07020 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GN304_07035 hypothetical protein K03409 cheX; chemotaxis protein CheX
D GN304_07000 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D GN304_07015 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GN304_07010 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GN304_07005 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_07030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GN304_02675 globin-coupled sensor protein K03406 mcp; methyl-accepting chemotaxis protein
D GN304_07040 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D GN304_07155 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GN304_07150 hypothetical protein K02413 fliJ; flagellar protein FliJ
D GN304_07220 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D GN304_07215 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GN304_07080 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GN304_07085 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR
D GN304_07205 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GN304_07090 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GN304_07235 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GN304_07325 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GN304_07225 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GN304_07240 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GN304_07185 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GN304_07265 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D GN304_07260 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D GN304_07330 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GN304_07075 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GN304_07060 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GN304_07055 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GN304_07125 flagellar biosynthesis protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D GN304_07275 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D GN304_07270 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GN304_07180 chemotaxis protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D GN304_07095 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D GN304_07280 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GN304_07285 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D GN304_05575 flagellin C K02406 fliC; flagellin
D GN304_07315 flagellin C K02406 fliC; flagellin
D GN304_07135 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GN304_07140 OmpA family protein K02557 motB; chemotaxis protein MotB
D GN304_06100 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bob04812]
D GN304_02860 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GN304_05730 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GN304_05725 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GN304_06745 minC; septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D GN304_06750 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GN304_06755 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D GN304_08870 AAA family ATPase K03496 parA; chromosome partitioning protein
D GN304_08865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bob04147]
D GN304_08695 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GN304_04010 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GN304_07405 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GN304_07400 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GN304_03780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GN304_03980 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D GN304_03600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GN304_01355 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GN304_02700 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GN304_03955 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GN304_06665 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GN304_01575 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GN304_08685 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D GN304_00040 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GN304_06550 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GN304_01410 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GN304_05110 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GN304_06145 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GN304_00135 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GN304_04160 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GN304_03870 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GN304_06845 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GN304_04080 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GN304_01315 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D GN304_05640 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GN304_04035 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GN304_04385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GN304_02710 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bob02048]
D GN304_07870 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GN304_00795 cas1e; type I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GN304_07875 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GN304_00800 type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GN304_00765 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D GN304_00770 casA; type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D GN304_00775 casB; type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D GN304_00780 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D GN304_00785 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D GN304_00790 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D GN304_07865 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D GN304_03760 hsdR; type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GN304_03765 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GN304_06490 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D GN304_01340 DNA modification methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GN304_00610 restriction endonuclease K07448 mrr; restriction system protein
D GN304_05945 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D GN304_05730 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GN304_02860 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GN304_03845 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GN304_01990 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GN304_03020 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_02045 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GN304_00570 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GN304_00575 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bob01504]
D GN304_03615 lysylphosphatidylglycerol synthetase family protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D GN304_00500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GN304_00505 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GN304_00510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GN304_01680 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D GN304_08750 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_04600 TolC family outer membrane protein K12340 tolC; outer membrane protein
D GN304_03060 TolC family protein K12340 tolC; outer membrane protein
D GN304_06710 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
D GN304_08225 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bob00537]
D GN304_03980 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bob03100]
D GN304_08790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_00155 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_00345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_00695 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_06010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_07895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GN304_02805 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_03740 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_03745 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_05795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GN304_05810 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GN304_05815 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GN304_01020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GN304_04595 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GN304_00250 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GN304_03940 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GN304_03945 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GN304_00935 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GN304_01570 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GN304_07995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_02470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_08000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_00650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GN304_07625 tRNA-His K14226 tRNA-His; tRNA His
D GN304_00340 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_00690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_06015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_07900 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GN304_07595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_05380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_01090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_03375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_05275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_07965 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GN304_08860 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GN304_01085 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GN304_00360 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_00710 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_05190 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_05995 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_07880 tRNA-Met K14230 tRNA-Met; tRNA Met
D GN304_07985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GN304_08670 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GN304_05800 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GN304_01310 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GN304_05480 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GN304_04265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_04410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_05585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_05940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GN304_06975 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GN304_00615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GN304_07430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GN304_00645 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GN304_07365 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GN304_04230 tRNA-Val K14237 tRNA-Val; tRNA Val
D GN304_05350 tRNA-Val K14237 tRNA-Val; tRNA Val
D GN304_04200 tRNA-Val K14237 tRNA-Val; tRNA Val
D GN304_06020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GN304_00700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GN304_00350 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GN304_03795 NAD-dependent epimerase/dehydratase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D GN304_01985 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D GN304_07290 ABC transporter substrate-binding protein K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D GN304_07295 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D GN304_08505 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D GN304_01325 FAD-dependent oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D GN304_07340 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D GN304_00605 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D GN304_04615 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D GN304_06425 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D GN304_01510 alpha/beta fold hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D GN304_02425 redoxin domain-containing protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GN304_00600 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D GN304_00365 Ohr family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D GN304_00060 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GN304_02075 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58]
D GN304_06765 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D GN304_03915 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D GN304_04320 fatty acid hydroxylase K19706 FAH; dihydroceramide fatty acyl 2-hydroxylase [EC:1.14.18.7]
D GN304_03815 FAD-dependent oxidoreductase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D GN304_02985 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GN304_08515 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D GN304_06360 methyltransferase domain-containing protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D GN304_08035 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D GN304_04890 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D GN304_01750 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D GN304_02415 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D GN304_08040 GNAT family N-acetyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D GN304_03925 hypothetical protein K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370]
D GN304_03810 hpnD; presqualene diphosphate synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D GN304_00275 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GN304_00420 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D GN304_02540 YbgC/FadM family acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GN304_05125 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GN304_08475 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D GN304_07835 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D GN304_03330 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GN304_01265 heavy metal translocating P-type ATPase K19597 golT; Au+-exporting ATPase [EC:3.6.1.-]
D GN304_06460 AAA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GN304_05385 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D GN304_03805 hpnC; squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
C 99981 Carbohydrate metabolism
D GN304_05615 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D GN304_05610 DUF3390 domain-containing protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D GN304_05605 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D GN304_00580 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S
D GN304_03650 DUF3470 domain-containing protein K05524 fdxA; ferredoxin
D GN304_01320 EtfB protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GN304_02210 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D GN304_04425 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D GN304_07165 glycosyl transferase K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D GN304_04090 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GN304_03900 cold-shock protein K03704 cspA; cold shock protein
D GN304_06900 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D GN304_07840 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D GN304_05375 trigger factor K03545 tig; trigger factor
D GN304_03895 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GN304_03865 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D GN304_01290 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
C 99976 Replication and repair
D GN304_04475 hypothetical protein K03630 radC; DNA repair protein RadC
D GN304_04480 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GN304_05580 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D GN304_04155 YraN family protein K07460 yraN; putative endonuclease
D GN304_02025 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D GN304_01955 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit
D GN304_02435 AAA family ATPase K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D GN304_07810 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GN304_05175 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GN304_05180 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GN304_04165 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GN304_04170 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GN304_04175 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GN304_07540 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D GN304_04695 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D GN304_01700 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D GN304_02475 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D GN304_02685 hypothetical protein K07085 K07085; putative transport protein
D GN304_02690 hypothetical protein K07085 K07085; putative transport protein
C 99978 Cell growth
D GN304_07760 glycosyltransferase K06320 cgeB; spore maturation protein CgeB
D GN304_06430 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D GN304_07520 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D GN304_04900 AAA family ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GN304_02905 Rieske 2Fe-2S domain-containing protein K22747 AIFM3; apoptosis-inducing factor 3
C 99992 Structural proteins
D GN304_06920 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D GN304_04370 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D GN304_04375 hypothetical protein K07266 kpsC; capsular polysaccharide export protein
D GN304_08600 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D GN304_02445 AsmA family protein K07290 yhjG; AsmA family protein
D GN304_02385 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D GN304_02370 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D GN304_02365 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D GN304_05225 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
D GN304_07570 DUF1656 domain-containing protein K21695 aaeX; protein AaeX
C 99994 Others
D GN304_01525 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D GN304_00485 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D GN304_04395 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin
D GN304_00375 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D GN304_02460 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D GN304_08710 copper resistance protein B K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GN304_02325 hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D GN304_00625 MCE family protein K06192 pqiB; paraquat-inducible protein B
D GN304_08500 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D GN304_08510 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D GN304_02930 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D GN304_05430 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D GN304_05420 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D GN304_02080 YihY family inner membrane protein K07058 K07058; membrane protein
D GN304_06195 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D GN304_08315 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D GN304_00620 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D GN304_05865 DUF4142 domain-containing protein K08995 K08995; putative membrane protein
C 99997 Function unknown
D GN304_02610 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D GN304_03625 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein
D GN304_03145 DUF815 domain-containing protein K06923 K06923; uncharacterized protein
D GN304_08440 MMPL family transporter K07003 K07003; uncharacterized protein
D GN304_00565 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D GN304_02920 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D GN304_01220 TSUP family transporter K07090 K07090; uncharacterized protein
D GN304_08100 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D GN304_07600 sel1 repeat family protein K07126 K07126; uncharacterized protein
D GN304_00435 hypothetical protein K07126 K07126; uncharacterized protein
D GN304_02285 FAD-binding protein K07137 K07137; uncharacterized protein
D GN304_08010 peptidase K07157 K07157; uncharacterized protein
D GN304_03275 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D GN304_00325 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D GN304_06400 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D GN304_07585 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D GN304_08015 Trm112 family protein K09791 K09791; uncharacterized protein
D GN304_03935 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D GN304_01430 DUF541 domain-containing protein K09807 K09807; uncharacterized protein
D GN304_00630 hypothetical protein K09857 K09857; uncharacterized protein
D GN304_08665 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D GN304_02900 DUF2076 family protein K09945 K09945; uncharacterized protein
D GN304_01945 DUF2213 domain-containing protein K09960 K09960; uncharacterized protein
D GN304_01950 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein
D GN304_08095 hypothetical protein K09985 K09985; uncharacterized protein
D GN304_06455 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D GN304_04495 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D GN304_04190 hypothetical protein K07276 K07276; uncharacterized protein
D GN304_02150 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 31, 2024