+D GENES KO
#
KEGG Orthology (KO) - Borrelia sp. HM
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:boq00010]
D BKFM_00731 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00028 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D BKFM_00443 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BKFM_00061 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BKFM_00063 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BKFM_00062 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BKFM_00657 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BKFM_00337 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BKFM_00348 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BKFM_00092 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BKFM_00559 nagE; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BKFM_00121 ptsG_1; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00644 ptsG_2; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway [PATH:boq00030]
D BKFM_00731 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BKFM_00635 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BKFM_00222 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D BKFM_00561 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BKFM_00656 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BKFM_00544 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BKFM_00443 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00028 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions
D BKFM_00206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:boq00051]
D BKFM_00403 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BKFM_00840 manB; Phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00028 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D BKFM_00629 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D BKFM_00443 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BKFM_00061 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BKFM_00404 frwC; PTS fructose-like transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BKFM_00628 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:boq00052]
D BKFM_00206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D BKFM_00442 wbgU; UDP-N-acetylglucosamine 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:boq00500]
D BKFM_00206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BKFM_00165 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D BKFM_00559 nagE; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BKFM_00121 ptsG_1; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00644 ptsG_2; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BKFM_00731 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:boq00520]
D BKFM_00617 nagZ_2; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BKFM_00011 nagZ_1; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BKFM_00559 nagE; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BKFM_00830 nagE; PTS system N-acetylglucosamine-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BKFM_00153 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BKFM_00154 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D BKFM_00475 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BKFM_00593 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BKFM_00643 nanE; Putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D BKFM_00121 ptsG_1; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00644 ptsG_2; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BKFM_00206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BKFM_00442 wbgU; UDP-N-acetylglucosamine 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D BKFM_00731 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BKFM_00403 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BKFM_00840 manB; Phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:boq00620]
D BKFM_00620 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BKFM_00584 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BKFM_00348 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BKFM_00092 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:boq00630]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00675 gph; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D BKFM_00596 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism [PATH:boq00640]
D BKFM_00620 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BKFM_00584 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BKFM_00092 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:boq00650]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00682 mvaS; Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D BKFM_00061 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:boq00190]
D BKFM_00099 ntpA; V-type sodium ATPase catalytic subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D BKFM_00098 ntpB; V-type sodium ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D BKFM_00097 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D BKFM_00101 atpE; V-type proton ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D BKFM_00096 hypothetical protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D BKFM_00095 hypothetical protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:boq00710]
D BKFM_00062 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BKFM_00063 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BKFM_00443 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BKFM_00656 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BKFM_00061 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00720 Other carbon fixation pathways [PATH:boq00720]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00034 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BKFM_00584 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BKFM_00620 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:boq00680]
D BKFM_00596 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BKFM_00337 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BKFM_00443 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00620 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BKFM_00584 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BKFM_00657 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism
D BKFM_00848 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D BKFM_00616 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:boq00061]
D BKFM_00704 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D BKFM_00143 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00588 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:boq00071]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00143 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00588 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:boq00561]
D BKFM_00242 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BKFM_00329 hypothetical protein K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BKFM_00045 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BKFM_00452 mgs; Alpha-monoglucosyldiacylglycerol synthase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:boq00564]
D BKFM_00365 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BKFM_00245 glpA; Glycerol-3-phosphate dehydrogenase 2 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D BKFM_00329 hypothetical protein K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BKFM_00045 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BKFM_00244 glpQ; Glycerophosphodiester phosphodiesterase, periplasmic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BKFM_00124 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BKFM_00251 pcs; Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D BKFM_00722 hypothetical protein K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:boq00230]
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BKFM_00544 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BKFM_00421 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BKFM_00780 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BKFM_00470 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BKFM_00419 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D BKFM_00465 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BKFM_00249 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D BKFM_00195 spoT; RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BKFM_00420 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BKFM_00507 ymdB_2; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D BKFM_00412 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BKFM_00848 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:boq00240]
D BKFM_00572 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BKFM_00465 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BKFM_00129 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D BKFM_00575 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BKFM_00134 cmk_1; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BKFM_00823 cmk_2; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BKFM_00023 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BKFM_00507 ymdB_2; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D BKFM_00615 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D BKFM_00798 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BKFM_00796 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:boq00250]
D BKFM_00420 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BKFM_00421 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:boq00260]
D BKFM_00596 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BKFM_00657 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00270 Cysteine and methionine metabolism [PATH:boq00270]
D BKFM_00374 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BKFM_00373 pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BKFM_00470 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BKFM_00375 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D BKFM_00092 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:boq00280]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00682 mvaS; Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:boq00300]
D BKFM_00570 Putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BKFM_00198 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BKFM_00308 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:boq00220]
D BKFM_00846 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D BKFM_00845 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D BKFM_00848 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:boq00430]
D BKFM_00584 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BKFM_00620 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D BKFM_00528 phnP; Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:boq00450]
D BKFM_00089 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BKFM_00516 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BKFM_00583 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D BKFM_00596 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:boq00470]
D BKFM_00159 alr1; Alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D BKFM_00197 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BKFM_00105 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BKFM_00581 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:boq00480]
D BKFM_00602 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BKFM_00561 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BKFM_00635 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:boq00541]
D BKFM_00206 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BKFM_00442 wbgU; UDP-N-acetylglucosamine 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D BKFM_00403 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BKFM_00840 manB; Phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00550 Peptidoglycan biosynthesis [PATH:boq00550]
D BKFM_00475 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BKFM_00593 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BKFM_00821 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BKFM_00581 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BKFM_00198 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BKFM_00197 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BKFM_00308 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BKFM_00125 uppS; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BKFM_00262 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BKFM_00307 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BKFM_00769 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BKFM_00733 mrcA; Multimodular transpeptidase-transglycosylase PBP 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BKFM_00719 mrdA; Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BKFM_00142 spoVD; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BKFM_00600 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BKFM_00579 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:boq00552]
D BKFM_00262 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BKFM_00452 mgs; Alpha-monoglucosyldiacylglycerol synthase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:boq00730]
D BKFM_00104 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BKFM_00412 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism [PATH:boq00750]
D BKFM_00770 pdxK; Pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
C 00760 Nicotinate and nicotinamide metabolism [PATH:boq00760]
D BKFM_00634 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D BKFM_00785 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BKFM_00315 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:boq00770]
D BKFM_00524 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D BKFM_00817 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BKFM_00702 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BKFM_00547 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BKFM_00018 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate [PATH:boq00670]
D BKFM_00034 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BKFM_00596 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BKFM_00070 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D BKFM_00370 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:boq00900]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00682 mvaS; Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D BKFM_00684 mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D BKFM_00687 galK; Galactokinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D BKFM_00686 hypothetical protein K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D BKFM_00685 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D BKFM_00683 fni; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D BKFM_00318 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D BKFM_00125 uppS; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D BKFM_00012 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BKFM_00704 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D BKFM_00374 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:boq03020]
D BKFM_00385 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BKFM_00384 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BKFM_00504 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:boq03010]
D BKFM_00133 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BKFM_00128 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BKFM_00486 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BKFM_00497 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BKFM_00120 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BKFM_00382 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BKFM_00494 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BKFM_00338 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BKFM_00479 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BKFM_00503 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BKFM_00383 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BKFM_00502 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BKFM_00493 rpsN1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BKFM_00809 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BKFM_00694 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BKFM_00489 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BKFM_00118 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BKFM_00484 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BKFM_00234 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BKFM_00260 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BKFM_00388 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BKFM_00483 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BKFM_00480 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BKFM_00481 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BKFM_00492 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BKFM_00495 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BKFM_00386 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BKFM_00117 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BKFM_00387 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BKFM_00389 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BKFM_00339 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BKFM_00490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BKFM_00499 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BKFM_00487 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BKFM_00505 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BKFM_00496 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BKFM_00698 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BKFM_00186 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BKFM_00781 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BKFM_00485 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BKFM_00482 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BKFM_00491 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BKFM_00790 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BKFM_00783 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BKFM_00350 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BKFM_00488 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BKFM_00498 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BKFM_00230 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D BKFM_00703 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BKFM_00393 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BKFM_00187 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BKFM_00501 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BKFM_00425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BKFM_00417 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:boq00970]
D BKFM_00370 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BKFM_00342 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BKFM_00341 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BKFM_00343 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BKFM_00220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BKFM_00445 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BKFM_00106 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BKFM_00369 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BKFM_00721 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BKFM_00227 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BKFM_00594 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BKFM_00583 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BKFM_00070 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BKFM_00740 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BKFM_00254 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BKFM_00838 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BKFM_00658 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BKFM_00589 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BKFM_00400 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BKFM_00141 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BKFM_00514 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BKFM_00515 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BKFM_00368 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BKFM_00013 trpS2; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:boq03060]
D BKFM_00500 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BKFM_00391 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BKFM_00060 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D BKFM_00651 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D BKFM_00652 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D BKFM_00650 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BKFM_00440 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BKFM_00156 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BKFM_00693 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BKFM_00082 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D BKFM_00038 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BKFM_00039 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BKFM_00267 spsB; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BKFM_00472 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D BKFM_00681 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:boq03018]
D BKFM_00337 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BKFM_00810 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BKFM_00231 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BKFM_00506 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00519 dnaK_2; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00268 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00648 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:boq03030]
D BKFM_00576 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BKFM_00462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00767 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00453 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BKFM_00436 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BKFM_00116 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BKFM_00712 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BKFM_00119 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BKFM_00053 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BKFM_00548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BKFM_00552 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:boq03410]
D BKFM_00748 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BKFM_00059 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BKFM_00422 mpg; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D BKFM_00021 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D BKFM_00529 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BKFM_00548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BKFM_00258 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BKFM_00552 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:boq03420]
D BKFM_00621 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BKFM_00842 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D BKFM_00841 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D BKFM_00454 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D BKFM_00344 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BKFM_00548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BKFM_00552 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:boq03430]
D BKFM_00802 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BKFM_00103 mutS2; Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D BKFM_00210 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D BKFM_00344 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BKFM_00258 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BKFM_00119 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BKFM_00576 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BKFM_00436 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BKFM_00462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00767 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00453 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BKFM_00552 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BKFM_00466 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:boq03440]
D BKFM_00258 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BKFM_00119 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BKFM_00437 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BKFM_00464 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D BKFM_00137 recA; Protein RecA K03553 recA; recombination protein RecA
D BKFM_00548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BKFM_00031 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BKFM_00030 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BKFM_00032 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BKFM_00578 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BKFM_00632 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BKFM_00633 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BKFM_00631 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BKFM_00576 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BKFM_00436 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BKFM_00462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00767 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00453 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BKFM_00022 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:boq02010]
D BKFM_00638 potD; Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BKFM_00639 potC; IABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D BKFM_00640 potB; Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D BKFM_00641 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BKFM_00148 proX; glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BKFM_00149 proW; glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D BKFM_00150 proV; Glycine betaine/proline betaine transport system ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BKFM_00379 bmp_1; BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D BKFM_00380 bmp_2; BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D BKFM_00381 bmp_3; BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D BKFM_00677 rbsC; ABC transporter permease protein K23535 nupB; general nucleoside transport system permease protein
D BKFM_00678 yufQ; ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D BKFM_00676 yufO; ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D BKFM_00215 pstS; Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D BKFM_00216 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D BKFM_00217 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D BKFM_00218 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BKFM_00330 oppA_1; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00331 oppA_2; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00332 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D BKFM_00333 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D BKFM_00334 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D BKFM_00335 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D BKFM_00086 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BKFM_00084 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BKFM_00085 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BKFM_00812 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D BKFM_00813 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D BKFM_00469 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
C 02060 Phosphotransferase system (PTS) [PATH:boq02060]
D BKFM_00558 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BKFM_00447 ptsH; HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D BKFM_00557 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BKFM_00559 nagE; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BKFM_00830 nagE; PTS system N-acetylglucosamine-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BKFM_00121 ptsG_1; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00644 ptsG_2; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00404 frwC; PTS fructose-like transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BKFM_00628 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BKFM_00629 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:boq03070]
D BKFM_00651 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D BKFM_00652 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D BKFM_00391 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BKFM_00060 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D BKFM_00500 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BKFM_00650 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BKFM_00440 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BKFM_00156 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BKFM_00082 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D BKFM_00693 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:boq02020]
D BKFM_00215 pstS; Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D BKFM_00795 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D BKFM_00151 fla; Flagellar filament 41 kDa core protein K02406 fliC; flagellin
D BKFM_00285 motA; motility protein A K02556 motA; chemotaxis protein MotA
D BKFM_00435 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BKFM_00579 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BKFM_00766 kinE; Sporulation kinase E K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D BKFM_00182 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00048 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BKFM_00409 cheR1; Chemotaxis protein methyltransferase 1 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BKFM_00591 mcp_1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00592 mcp_2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00679 mcp_3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00680 mcp_4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00316 cheW_1; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00564 cheW_2; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00669 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00566 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00668 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00551 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00569 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00671 cheY_3; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00410 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00567 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00415 rcsC; Sensor histidine kinase RcsC K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
D BKFM_00414 pleD; diguanylate cyclase K18444 rrp1; two-component system, glycerol uptake and utilization response regulator
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:boq02024]
D BKFM_00375 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D BKFM_00143 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00588 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00330 oppA_1; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00331 oppA_2; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00332 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D BKFM_00333 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D BKFM_00334 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D BKFM_00335 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D BKFM_00750 dppB; ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BKFM_00749 yejE; ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BKFM_00440 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BKFM_00391 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BKFM_00060 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D BKFM_00500 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BKFM_00650 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BKFM_00156 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BKFM_00082 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D BKFM_00693 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:boq02030]
D BKFM_00591 mcp_1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00592 mcp_2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00679 mcp_3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00680 mcp_4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00566 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00668 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00316 cheW_1; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00564 cheW_2; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00669 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00551 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00569 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00671 cheY_3; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00670 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D BKFM_00410 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00567 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00601 cheD; Chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D BKFM_00048 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BKFM_00409 cheR1; Chemotaxis protein methyltransferase 1 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BKFM_00221 fliG_1; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D BKFM_00294 fliG_2; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D BKFM_00282 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D BKFM_00281 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BKFM_00285 motA; motility protein A K02556 motA; chemotaxis protein MotA
D BKFM_00284 motB; Motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:boq02040]
D BKFM_00296 fliE; Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D BKFM_00295 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D BKFM_00221 fliG_1; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D BKFM_00294 fliG_2; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D BKFM_00293 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D BKFM_00292 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BKFM_00283 fliL; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D BKFM_00282 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D BKFM_00281 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BKFM_00280 fliZ; flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D BKFM_00279 fliP; Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D BKFM_00278 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D BKFM_00277 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D BKFM_00275 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D BKFM_00276 flhB; Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D BKFM_00298 flgB; Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D BKFM_00297 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D BKFM_00288 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D BKFM_00287 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D BKFM_00778 flgG_2; Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D BKFM_00777 flgG_1; Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D BKFM_00775 flgI; Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D BKFM_00774 flgJ; Flagellar protein flgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D BKFM_00179 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D BKFM_00180 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D BKFM_00151 fla; Flagellar filament 41 kDa core protein K02406 fliC; flagellin
D BKFM_00152 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D BKFM_00550 fliS; Flagellar secretion chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D BKFM_00285 motA; motility protein A K02556 motA; chemotaxis protein MotA
D BKFM_00284 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D BKFM_00713 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BKFM_00337 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:boq01501]
D BKFM_00617 nagZ_2; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BKFM_00011 nagZ_1; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BKFM_00330 oppA_1; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00331 oppA_2; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00332 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D BKFM_00333 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D BKFM_00334 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D BKFM_00335 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D BKFM_00733 mrcA; Multimodular transpeptidase-transglycosylase PBP 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BKFM_00719 mrdA; Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BKFM_00142 spoVD; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:boq01502]
D BKFM_00197 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BKFM_00159 alr1; Alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D BKFM_00308 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BKFM_00307 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BKFM_00769 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BKFM_00579 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:boq01503]
D BKFM_00623 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BKFM_00665 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BKFM_00795 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:boq01000]
C 01001 Protein kinases [BR:boq01001]
D BKFM_00766 kinE; Sporulation kinase E K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D BKFM_00566 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00668 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00415 rcsC; Sensor histidine kinase RcsC K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:boq01009]
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00560 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:boq01002]
D BKFM_00472 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BKFM_00619 thiJ; DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D BKFM_00250 pepF1; Oligoendopeptidase F, plasmid K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D BKFM_00579 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BKFM_00229 hypothetical protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D BKFM_00531 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D BKFM_00570 Putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BKFM_00602 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BKFM_00110 map; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BKFM_00073 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BKFM_00075 Aminopeptidase 2 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D BKFM_00793 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BKFM_00123 Putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BKFM_00795 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D BKFM_00600 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BKFM_00608 clpP_1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BKFM_00760 clpP_2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BKFM_00256 lon1_1; Lon protease 1 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BKFM_00610 lon1_2; Lon protease 1 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BKFM_00038 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BKFM_00039 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BKFM_00267 spsB; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BKFM_00358 ctpA; Carboxy-terminal processing protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BKFM_00300 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D BKFM_00202 hflC; Modulator of FtsH protease HflC K04087 hflC; modulator of FtsH protease HflC
D BKFM_00201 hflK; Modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:boq01003]
D BKFM_00452 mgs; Alpha-monoglucosyldiacylglycerol synthase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D BKFM_00733 mrcA; Multimodular transpeptidase-transglycosylase PBP 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:boq01011]
D BKFM_00475 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BKFM_00593 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BKFM_00821 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BKFM_00581 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BKFM_00198 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BKFM_00197 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BKFM_00159 alr1; Alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D BKFM_00105 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BKFM_00307 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BKFM_00769 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BKFM_00262 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BKFM_00815 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D BKFM_00733 mrcA; Multimodular transpeptidase-transglycosylase PBP 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BKFM_00719 mrdA; Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BKFM_00142 spoVD; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BKFM_00600 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D BKFM_00579 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BKFM_00263 mltC; Membrane-bound lytic murein transglycosylase C K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BKFM_00711 mltG; Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D BKFM_00737 rlpA; septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BKFM_00623 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BKFM_00665 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:boq01004]
D BKFM_00143 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00588 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00329 hypothetical protein K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BKFM_00045 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:boq01006]
D BKFM_00318 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D BKFM_00125 uppS; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BKFM_00825 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:boq01007]
D BKFM_00658 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BKFM_00370 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BKFM_00368 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BKFM_00013 trpS2; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BKFM_00594 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BKFM_00589 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BKFM_00583 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BKFM_00838 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BKFM_00740 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BKFM_00254 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BKFM_00445 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BKFM_00106 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BKFM_00141 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BKFM_00369 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BKFM_00227 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BKFM_00400 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BKFM_00721 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BKFM_00220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BKFM_00514 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BKFM_00515 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:boq03000]
D BKFM_00646 fur; transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D BKFM_00432 spo0J; Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BKFM_00732 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BKFM_00355 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BKFM_00167 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:boq03021]
D BKFM_00504 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BKFM_00385 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BKFM_00384 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BKFM_00713 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D BKFM_00773 rpoD; RNA polymerase sigma factor RpoD/SigA K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D BKFM_00805 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D BKFM_00112 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BKFM_00390 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D BKFM_00167 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D BKFM_00231 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:boq03019]
D BKFM_00705 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BKFM_00506 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BKFM_00337 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BKFM_00810 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BKFM_00231 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BKFM_00728 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BKFM_00519 dnaK_2; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00268 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00648 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BKFM_00182 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:boq03011]
D BKFM_00133 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BKFM_00128 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BKFM_00486 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BKFM_00497 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BKFM_00120 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BKFM_00382 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BKFM_00494 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BKFM_00338 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BKFM_00479 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BKFM_00503 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BKFM_00383 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BKFM_00502 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BKFM_00493 rpsN1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BKFM_00809 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BKFM_00694 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BKFM_00489 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BKFM_00118 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BKFM_00484 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BKFM_00234 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BKFM_00260 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BKFM_00388 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BKFM_00483 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BKFM_00480 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BKFM_00481 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BKFM_00492 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BKFM_00495 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BKFM_00117 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BKFM_00387 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BKFM_00389 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BKFM_00386 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BKFM_00339 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BKFM_00490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BKFM_00499 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BKFM_00487 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BKFM_00505 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BKFM_00496 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BKFM_00698 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BKFM_00186 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BKFM_00781 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BKFM_00485 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BKFM_00482 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BKFM_00491 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BKFM_00783 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BKFM_00350 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BKFM_00488 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BKFM_00498 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BKFM_00230 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D BKFM_00703 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BKFM_00393 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BKFM_00187 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BKFM_00501 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BKFM_00790 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BKFM_00425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BKFM_00417 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:boq03009]
D BKFM_00705 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BKFM_00659 era; GTPase Era K03595 era; GTPase
D BKFM_00784 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D BKFM_00167 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D BKFM_00805 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D BKFM_00112 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BKFM_00390 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D BKFM_00585 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BKFM_00205 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BKFM_00068 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BKFM_00357 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BKFM_00310 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BKFM_00426 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BKFM_00508 tlyA; Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BKFM_00517 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BKFM_00317 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BKFM_00135 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BKFM_00819 rluA; RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BKFM_00026 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BKFM_00696 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D BKFM_00104 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BKFM_00510 der; GTPase Der K03977 engA; GTPase
D BKFM_00642 rbgA; Ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D BKFM_00736 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BKFM_00195 spoT; RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BKFM_00807 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D BKFM_00804 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D BKFM_00787 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D BKFM_00066 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D BKFM_00236 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:boq03016]
D BKFM_00758 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D BKFM_00706 pcnB; CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D BKFM_00370 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BKFM_00400 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BKFM_00838 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BKFM_00254 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BKFM_00583 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BKFM_00589 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BKFM_00445 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BKFM_00220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BKFM_00106 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BKFM_00369 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BKFM_00721 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BKFM_00227 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BKFM_00594 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BKFM_00740 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BKFM_00141 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BKFM_00514 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BKFM_00515 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BKFM_00368 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BKFM_00013 trpS2; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BKFM_00376 hit; Protein hit K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BKFM_00020 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BKFM_00808 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BKFM_00736 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BKFM_00825 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BKFM_00177 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BKFM_00176 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BKFM_00439 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BKFM_00658 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BKFM_00226 dus_1; tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D BKFM_00697 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BKFM_00681 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BKFM_00029 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BKFM_00814 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BKFM_00792 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BKFM_00183 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BKFM_00771 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BKFM_00184 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BKFM_00810 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:boq03012]
D BKFM_00806 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BKFM_00188 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BKFM_00127 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D BKFM_00478 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D BKFM_00539 fusA_1; Elongation factor G K02355 fusA; elongation factor G
D BKFM_00691 fusA_2; Elongation factor G K02355 fusA; elongation factor G
D BKFM_00193 prfA; Peptide chain release factor RF1 K02835 prfA; peptide chain release factor 1
D BKFM_00126 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D BKFM_00194 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BKFM_00791 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BKFM_00168 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BKFM_00214 efp; Elongation factor P K02356 efp; elongation factor P
D BKFM_00080 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:boq03110]
D BKFM_00839 clpA; ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D BKFM_00609 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BKFM_00299 hsIU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D BKFM_00560 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BKFM_00519 dnaK_2; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00268 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00648 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BKFM_00518 dnaJ_1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BKFM_00654 dnaJ; J domain-containing protein K05516 cbpA; curved DNA-binding protein
D BKFM_00520 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D BKFM_00444 hypothetical protein K13993 HSP20; HSP20 family protein
D BKFM_00742 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D BKFM_00795 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D BKFM_00793 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BKFM_00067 trxA; Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:boq04131]
D BKFM_00465 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BKFM_00063 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BKFM_00657 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BKFM_00348 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BKFM_00560 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:boq03051]
D BKFM_00560 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:boq03032]
D BKFM_00233 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D BKFM_00435 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BKFM_00116 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BKFM_00712 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BKFM_00119 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BKFM_00576 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BKFM_00436 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BKFM_00453 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BKFM_00462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00767 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00053 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BKFM_00548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BKFM_00552 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BKFM_00466 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BKFM_00433 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BKFM_00434 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BKFM_00043 gyrA_1; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BKFM_00044 gyrB_1; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BKFM_00832 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:boq03036]
D BKFM_00705 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BKFM_00233 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D BKFM_00654 dnaJ; J domain-containing protein K05516 cbpA; curved DNA-binding protein
D BKFM_00435 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BKFM_00690 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein
D BKFM_00052 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D BKFM_00304 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BKFM_00142 spoVD; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BKFM_00261 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BKFM_00305 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D BKFM_00306 ftsW_1; putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D BKFM_00303 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BKFM_00623 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BKFM_00665 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BKFM_00716 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BKFM_00717 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D BKFM_00720 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D BKFM_00430 bcsQ; cellulose biosynthesis protein BcsQ K03496 parA; chromosome partitioning protein
D BKFM_00432 spo0J; Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BKFM_00732 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BKFM_00043 gyrA_1; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BKFM_00044 gyrB_1; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BKFM_00176 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
C 03400 DNA repair and recombination proteins [BR:boq03400]
D BKFM_00059 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BKFM_00422 mpg; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D BKFM_00748 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BKFM_00021 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D BKFM_00529 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BKFM_00258 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BKFM_00552 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BKFM_00548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BKFM_00842 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D BKFM_00841 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D BKFM_00454 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D BKFM_00344 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BKFM_00385 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BKFM_00384 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BKFM_00504 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BKFM_00621 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BKFM_00802 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BKFM_00103 mutS2; Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D BKFM_00210 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D BKFM_00576 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BKFM_00436 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BKFM_00453 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BKFM_00462 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00767 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BKFM_00119 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BKFM_00466 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BKFM_00632 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BKFM_00633 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BKFM_00631 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BKFM_00137 recA; Protein RecA K03553 recA; recombination protein RecA
D BKFM_00031 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BKFM_00030 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BKFM_00032 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BKFM_00022 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BKFM_00834 sbcC; SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D BKFM_00833 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D BKFM_00437 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BKFM_00578 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BKFM_00464 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D BKFM_00314 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D BKFM_00433 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BKFM_00434 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BKFM_00832 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BKFM_00233 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D BKFM_00616 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:boq03029]
D BKFM_00806 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BKFM_00188 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BKFM_00127 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D BKFM_00478 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D BKFM_00539 fusA_1; Elongation factor G K02355 fusA; elongation factor G
D BKFM_00691 fusA_2; Elongation factor G K02355 fusA; elongation factor G
D BKFM_00659 era; GTPase Era K03595 era; GTPase
D BKFM_00368 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BKFM_00254 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BKFM_00445 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BKFM_00369 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BKFM_00589 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BKFM_00342 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D BKFM_00341 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D BKFM_00343 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D BKFM_00405 nuc1; DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D BKFM_00119 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D BKFM_00800 Putative outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D BKFM_00519 dnaK_2; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00268 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00520 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D BKFM_00648 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BKFM_00742 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D BKFM_00518 dnaJ_1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BKFM_00440 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BKFM_00560 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:boq02000]
D BKFM_00638 potD; Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BKFM_00639 potC; IABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D BKFM_00640 potB; Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D BKFM_00641 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BKFM_00148 proX; glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BKFM_00149 proW; glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D BKFM_00150 proV; Glycine betaine/proline betaine transport system ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BKFM_00379 bmp_1; BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D BKFM_00380 bmp_2; BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D BKFM_00381 bmp_3; BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D BKFM_00677 rbsC; ABC transporter permease protein K23535 nupB; general nucleoside transport system permease protein
D BKFM_00678 yufQ; ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D BKFM_00676 yufO; ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D BKFM_00323 med; BMP family ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D BKFM_00321 hypothetical protein K02057 ABC.SS.P; simple sugar transport system permease protein
D BKFM_00322 mglA; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D BKFM_00215 pstS; Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D BKFM_00216 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D BKFM_00217 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D BKFM_00218 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BKFM_00330 oppA_1; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00331 oppA_2; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D BKFM_00332 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D BKFM_00333 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D BKFM_00334 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D BKFM_00335 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D BKFM_00750 dppB; ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BKFM_00749 yejE; ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BKFM_00812 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D BKFM_00813 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D BKFM_00469 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BKFM_00756 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein
D BKFM_00757 btuD_2; Vitamin B12 import ATP-binding protein BtuD K25152 gldA; gliding motility-associated transport system ATP-binding protein
D BKFM_00755 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D BKFM_00086 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BKFM_00084 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BKFM_00085 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BKFM_00573 btuD_1; Vitamin B12 import ATP-binding protein BtuD K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BKFM_00580 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D BKFM_00476 norM; Multidrug resistance protein NorM K26937 dinF; MATE family, multidrug efflux pump
D BKFM_00243 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D BKFM_00558 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BKFM_00447 ptsH; HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D BKFM_00557 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BKFM_00559 nagE; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D BKFM_00830 nagE; PTS system N-acetylglucosamine-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D BKFM_00121 ptsG_1; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00644 ptsG_2; PTS system glucose-specific EIICBA component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D BKFM_00404 frwC; PTS fructose-like transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BKFM_00628 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D BKFM_00241 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D BKFM_00171 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D BKFM_00172 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D BKFM_00451 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D BKFM_00377 mgtE; Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D BKFM_00285 motA; motility protein A K02556 motA; chemotaxis protein MotA
D BKFM_00284 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D BKFM_00200 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BKFM_00800 Putative outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D BKFM_00468 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D BKFM_00065 hypothetical protein K06189 corC; hemolysin (HlyC) family protein
D BKFM_00219 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D BKFM_00599 lldP; L-lactate permease K03303 lutP; lactate permease
D BKFM_00163 yrbG; Inner membrane protein YrbG K07301 yrbG; cation:H+ antiporter
D BKFM_00818 panF; Sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D BKFM_00446 kefB; Glutathione-regulated potassium-efflux system protein KefB K26730 napA; Na+:H+ antiporter
D BKFM_00725 trkG; potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D BKFM_00726 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D BKFM_00449 hypothetical protein K07240 chrA; chromate transporter
D BKFM_00450 hypothetical protein K07240 chrA; chromate transporter
D BKFM_00815 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D BKFM_00057 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D BKFM_00058 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D BKFM_00306 ftsW_1; putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
C 02044 Secretion system [BR:boq02044]
D BKFM_00577 hypothetical protein K02221 yggT; YggT family protein
D BKFM_00586 hypothetical protein K02238 comEC; competence protein ComEC
D BKFM_00803 comFC; competence protein ComF K02242 comFC; competence protein ComFC
D BKFM_00275 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D BKFM_00276 flhB; Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D BKFM_00295 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D BKFM_00293 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D BKFM_00292 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BKFM_00281 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BKFM_00280 fliZ; flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D BKFM_00279 fliP; Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D BKFM_00278 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D BKFM_00277 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D BKFM_00156 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BKFM_00651 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D BKFM_00391 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D BKFM_00652 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D BKFM_00060 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D BKFM_00500 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D BKFM_00693 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BKFM_00082 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D BKFM_00650 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D BKFM_00440 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:boq02042]
D BKFM_00200 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BKFM_00122 hlyIII; hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:boq02022]
D BKFM_00766 kinE; Sporulation kinase E K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D BKFM_00566 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00668 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00551 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00569 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00671 cheY_3; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00410 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00567 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00415 rcsC; Sensor histidine kinase RcsC K02489 hk1; two-component system, glycerol uptake and utilization sensor kinase [EC:2.7.13.3]
D BKFM_00414 pleD; diguanylate cyclase K18444 rrp1; two-component system, glycerol uptake and utilization response regulator
C 02035 Bacterial motility proteins [BR:boq02035]
D BKFM_00566 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00668 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BKFM_00316 cheW_1; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00564 cheW_2; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00669 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D BKFM_00670 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D BKFM_00601 cheD; Chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D BKFM_00048 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BKFM_00409 cheR1; Chemotaxis protein methyltransferase 1 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BKFM_00410 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00567 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BKFM_00551 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00569 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00671 cheY_3; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BKFM_00591 mcp_1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00592 mcp_2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00679 mcp_3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00680 mcp_4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BKFM_00293 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D BKFM_00292 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BKFM_00280 fliZ; flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D BKFM_00279 fliP; Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D BKFM_00278 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D BKFM_00277 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D BKFM_00275 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D BKFM_00276 flhB; Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D BKFM_00221 fliG_1; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D BKFM_00294 fliG_2; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D BKFM_00282 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D BKFM_00281 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BKFM_00295 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D BKFM_00775 flgI; Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D BKFM_00283 fliL; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D BKFM_00296 fliE; Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D BKFM_00298 flgB; Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D BKFM_00297 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D BKFM_00288 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D BKFM_00778 flgG_2; Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D BKFM_00777 flgG_1; Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D BKFM_00774 flgJ; Flagellar protein flgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D BKFM_00287 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D BKFM_00179 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D BKFM_00180 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D BKFM_00151 fla; Flagellar filament 41 kDa core protein K02406 fliC; flagellin
D BKFM_00152 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D BKFM_00550 fliS; Flagellar secretion chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D BKFM_00285 motA; motility protein A K02556 motA; chemotaxis protein MotA
D BKFM_00284 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D BKFM_00181 fliW; Flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D BKFM_00291 flbA; flagellar protein FlbA K02382 flbA; flagellar protein FlbA
D BKFM_00290 flbB; FlbB protein K02383 flbB; flagellar protein FlbB
D BKFM_00289 fliK; flagellar hook-length control protein FliK K02384 flbC; flagellar protein FlbC
D BKFM_00286 flbD; flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D BKFM_00274 flhF; Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D BKFM_00273 ylxH; Flagellum site-determining protein YlxH K04562 flhG; flagellar biosynthesis protein FlhG
D BKFM_00360 flhG; MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D BKFM_00727 flhG; ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:boq04812]
D BKFM_00716 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BKFM_00303 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BKFM_00304 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BKFM_00430 bcsQ; cellulose biosynthesis protein BcsQ K03496 parA; chromosome partitioning protein
D BKFM_00432 spo0J; Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BKFM_00732 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:boq04147]
D BKFM_00560 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BKFM_00337 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BKFM_00063 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BKFM_00062 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BKFM_00348 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BKFM_00648 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BKFM_00519 dnaK_2; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00268 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BKFM_00731 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BKFM_00478 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D BKFM_00376 hit; Protein hit K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BKFM_00092 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D BKFM_00143 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00588 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BKFM_00114 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BKFM_00412 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BKFM_00780 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BKFM_00242 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BKFM_00635 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BKFM_00061 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BKFM_00657 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:boq02048]
D BKFM_00466 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BKFM_00303 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BKFM_00716 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BKFM_00043 gyrA_1; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BKFM_00044 gyrB_1; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BKFM_00370 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:boq01504]
D BKFM_00579 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:boq03100]
D BKFM_00425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BKFM_00417 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BKFM_00238 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D BKFM_00361 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BKFM_00835 nagC; ROK family protein K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D BKFM_00016 cdaA; Cyclic di-AMP synthase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D BKFM_00191 dtd3; D-aminoacyl-tRNA deacylase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BKFM_00625 rnmV; Ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D BKFM_00071 def1; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BKFM_00175 moxR; MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D BKFM_00408 hypothetical protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D BKFM_00090 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D BKFM_00607 tig; Trigger factor K03545 tig; trigger factor
D BKFM_00041 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D BKFM_00091 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D BKFM_00844 hypothetical protein K06993 K06993; ribonuclease H-related protein
D BKFM_00301 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
C 99979 Viral proteins
C 99998 Others
D BKFM_00463 ebfC; Nucleoid-associated protein EbfC K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D BKFM_00441 jag; protein jag K06346 jag; spoIIIJ-associated protein
D BKFM_00788 spoVG; Putative septation protein SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
D BKFM_00014 yhhT; Putative transport protein YhhT K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D BKFM_00049 phoU; Phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein
D BKFM_00836 cutC; Copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BKFM_00768 hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D BKFM_00512 ppaX; Pyrophosphatase PpaX K07025 K07025; putative hydrolase of the HAD superfamily
C 99997 Function unknown
D BKFM_00538 ybhL; Inner membrane protein YbhL K06890 K06890; uncharacterized protein
D BKFM_00730 tcyP; L-cystine uptake protein TcyP K06956 K06956; uncharacterized protein
D BKFM_00695 hypothetical protein K06960 K06960; uncharacterized protein
D BKFM_00255 hypothetical protein K07003 K07003; uncharacterized protein
D BKFM_00108 hypothetical protein K07101 K07101; uncharacterized protein
D BKFM_00714 hypothetical protein K07164 K07164; uncharacterized protein
D BKFM_00662 hypothetical protein K09005 K09005; uncharacterized protein
D BKFM_00271 hypothetical protein K09749 K09749; uncharacterized protein
D BKFM_00019 hypothetical protein K09766 K09766; uncharacterized protein
D BKFM_00037 hypothetical protein K09768 K09768; uncharacterized protein
D BKFM_00246 hypothetical protein K09770 K09770; uncharacterized protein
D BKFM_00076 hypothetical protein K09775 K09775; uncharacterized protein
D BKFM_00772 hypothetical protein K09798 K09798; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024