+F Repair protein KO
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DNA Repair and Recombination Proteins - Bathycoccus prasinos
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D Bathy01g04990 hypothetical protein K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D Bathy03g02980 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Bathy07g00130 CPD photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E Bathy07g03160 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E Bathy12g02580 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E Bathy10g04230 hypothetical protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E Bathy16g01600 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E Bathy12g03470 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D Long Patch-BER factors
E DNA polymerase delta complex
F Bathy03g02400 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F Bathy16g00030 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E DNA polymerase epsilon complex
F Bathy13g01530 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F Bathy01g06220 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E Bathy05g03120 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E Bathy01g05220 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E Bathy11g00330 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E Bathy05g04070 aprataxin K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E Bathy05g02940 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E Bathy10g00110 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F Bathy12g01710 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F Bathy11g01940 hypothetical protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F Bathy07g04140 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F Bathy18g01020 hypothetical protein K10609 CUL4; cullin 4
F Bathy11g03760 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F Bathy04g01900 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F Bathy11g01290 RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F Bathy14g02800 DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F Bathy10g04100 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F Bathy08g04520 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F Bathy03g01240 DNA-directed RNA polymerases I K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F Bathy11g01880 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F Bathy11g01180 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F Bathy14g02490 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F Bathy18g01200 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F Bathy02g03510 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F Bathy14g02500 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F Bathy07g04140 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F Bathy18g01020 hypothetical protein K10609 CUL4; cullin 4
F Bathy11g03760 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
F Bathy13g02020 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F Bathy03g02110 DNA repair and recombination protein RAD26 K10841 ERCC6; DNA excision repair protein ERCC-6
F Bathy01g02340 Transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E Bathy07g01930 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E Bathy09g04440 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E Bathy06g00880 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E Bathy05g02250 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E Bathy01g02030 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E Bathy11g03500 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E Bathy11g03520 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E Bathy02g01730 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E Bathy02g04380 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E Bathy09g02290 hypothetical protein K06634 CCNH; cyclin H
E Bathy13g01390 CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E Bathy02g01940 hypothetical protein K07466 RFA1; replication factor A1
E Bathy09g00530 hypothetical protein K07466 RFA1; replication factor A1
E Bathy17g00820 hypothetical protein K10739 RFA2; replication factor A2
E Bathy04g02880 hypothetical protein K10740 RPA3; replication factor A3
D Other NER factors
E Bathy14g02070 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1
E Bathy04g01190 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E Bathy11g00330 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E Bathy06g03210 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E Bathy09g02930 hypothetical protein K03869 CUL3; cullin 3
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E Bathy01g00720 DNA mismatch repair protein msh-2 K08735 MSH2; DNA mismatch repair protein MSH2
E Bathy06g04210 DNA mismatch repair protein Msh3 K08736 MSH3; DNA mismatch repair protein MSH3
E Bathy05g00030 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
E Bathy05g02800 DNA mismatch repair protein MutS K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E Bathy04g02490 MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E Bathy05g04340 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E Bathy03g02400 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E Bathy16g00030 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
D RPA (replication factor A)
E Bathy02g01940 hypothetical protein K07466 RFA1; replication factor A1
E Bathy09g00530 hypothetical protein K07466 RFA1; replication factor A1
E Bathy17g00820 hypothetical protein K10739 RFA2; replication factor A2
E Bathy04g02880 hypothetical protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E Bathy14g01940 hypothetical protein K10754 RFC1; replication factor C subunit 1
E Bathy10g03440 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
E Bathy07g02280 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E Bathy14g02160 replication factor C small subunit K10756 RFC3_5; replication factor C subunit 3/5
E Bathy03g00120 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E Bathy05g03120 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E Bathy16g01290 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E Bathy01g03130 exonuclease K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E Bathy11g00330 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E Bathy01g06140 PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E Bathy08g00470 meiotic recombination 11 K10865 MRE11; double-strand break repair protein MRE11
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
E Bathy18g00670 hypothetical protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E Bathy18g00570 hypothetical protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E Bathy08g00470 meiotic recombination 11 K10865 MRE11; double-strand break repair protein MRE11
D BRCA complex
E Bathy01g04710 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E Bathy01g04710 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
E Bathy06g00800 spindle D K10869 RAD51L1; RAD51-like protein 1
E Bathy07g02730 RAD51C protein K10870 RAD51L2; RAD51-like protein 2
E Bathy07g03270 Rad51 DNA recombinase 4 K10871 RAD51L3; RAD51-like protein 3
E Bathy09g00350 XRCC2 DNA recombinase K10879 XRCC2; DNA-repair protein XRCC2
D Rad52 family proteins
D Rad54 family proteins
E Bathy01g05900 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E Bathy10g01030 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E Bathy10g03340 Snf2 family protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E Bathy15g00660 hypothetical protein K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E Bathy12g02670 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E Bathy03g04970 ATP-dependent DNA helicase RecQ K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E Bathy12g02670 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E Bathy05g03570 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E Bathy09g04290 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E Bathy10g02540 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E Bathy02g01940 hypothetical protein K07466 RFA1; replication factor A1
E Bathy09g00530 hypothetical protein K07466 RFA1; replication factor A1
E Bathy17g00820 hypothetical protein K10739 RFA2; replication factor A2
E Bathy04g02880 hypothetical protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E Bathy08g03140 serine/threonine-protein phosphatase 4 catalytic subunit K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E Bathy02g00710 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E Bathy15g02440 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E Bathy02g03090 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6
E Bathy04g02380 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E Bathy09g01460 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E Bathy01g00940 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E Bathy07g00160 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E Bathy07g04890 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E Bathy01g00620 hypothetical protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E Bathy02g01140 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E Bathy07g03790 DNA replication licensing factor MCM8 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E Bathy06g02810 replicative DNA helicase Mcm K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E Bathy06g02530 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E Bathy01g06420 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E Bathy15g00740 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
E Bathy07g02920 DNA-dependent protein kinase catalytic subunit K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
D MRX complex
E Bathy08g00470 meiotic recombination 11 K10865 MRE11; double-strand break repair protein MRE11
D DNA Ligase 4 complex
E Bathy13g01730 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E Bathy10g00110 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E Bathy05g04070 aprataxin K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E Bathy02g05090 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E Bathy03g04710 JmjC domain-containing protein 8 K25792 JMJD8; jumonji domain-containing protein 8
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E Bathy16g02520 hypothetical protein K11511 APITD1; centromere protein S
E Bathy03g00340 DUF2008-containing protein K15360 STRA13; centromere protein X
D Bloom's syndrome complex (BTR)
E Bathy12g02670 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E Bathy05g03570 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E Bathy09g04290 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E Bathy10g02540 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
E Bathy18g00670 hypothetical protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E Bathy02g02690 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E Bathy01g04710 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
E Bathy07g02730 RAD51C protein K10870 RAD51L2; RAD51-like protein 2
E Bathy08g04530 hypothetical protein K11137 TELO2; telomere length regulation protein
E Bathy02g02160 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E Bathy09g00880 hypothetical protein K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
D Ubiquitin ligases
D Others
E Bathy04g00660 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E Bathy08g02010 hypothetical protein K24752 WDR70; WD repeat-containing protein 70
E Bathy01g06140 PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D Bathy13g01640 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D Bathy02g04410 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D Bathy05g02090 DNA polymerase IV K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
C A-family DNA polymerase
C Rad6 epistasis group
D Bathy12g02570 hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D Bathy02g04700 ubiquitin-conjugating enzyme K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D Bathy10g00590 ubiquitin-conjugating enzyme K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D Bathy03g03200 hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D Bathy05g03120 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D Bathy01g04050 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D Bathy01g00740 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D Bathy03g00080 cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D Bathy10g03440 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
D Bathy07g02280 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D Bathy14g02160 replication factor C small subunit K10756 RFC3_5; replication factor C subunit 3/5
D Bathy03g00120 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
C FPC (fork protection complex)
C Triple T complex
D Bathy08g04530 hypothetical protein K11137 TELO2; telomere length regulation protein
D Bathy11g00620 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
C Other check point factors
D Bathy04g03850 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D Bathy07g02930 ataxia telangiectasia mutated K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D Bathy04g00680 hypothetical protein K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D Bathy09g01130 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D Bathy06g01670 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D Bathy11g02980 hypothetical protein K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D Bathy11g00320 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
B Other factors with a suspected DNA repair function
C DNA polymerases
D Bathy10g00630 hypothetical protein K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D Bathy08g03440 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D Bathy11g00450 hypothetical protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D Bathy13g00900 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
C Helicases
D Bathy03g02000 DNA excision repair protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D Bathy12g02680 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D Bathy03g00420 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D Bathy02g04660 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D Bathy01g05070 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D Bathy10g02040 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bathy04g04920 7,8-dihydro-8-oxoguanine triphosphatase K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
D Bathy12g00190 dUTP pyrophosphatase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Bathy01g00140 Ribonucleoside-diphosphate reductase subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D Bathy04g00440 Ribonucleoside-diphosphate reductase small chain, putative K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D Bathy07g03560 Ribonucleotide reductase subunit K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D Bathy03g02980 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Bathy07g00130 CPD photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E Bathy07g03160 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E Bathy12g02580 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E Bathy07g03970 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E Bathy12g03470 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E Bathy09g01210 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E Bathy10g01730 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E Bathy10g01730 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F BathyCg00282 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F BathyCg00010 rpoC1; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F BathyCg00281 rpoC2; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F BathyCg00301 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E Bathy11g03030 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E Bathy11g02940 recombinase A K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E Bathy11g02940 recombinase A K03553 recA; recombination protein RecA
E Bathy08g00890 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F Bathy12g00470 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F Bathy09g01970 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D Bathy11g02940 recombinase A K03553 recA; recombination protein RecA
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D Bathy10g02040 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Bathy12g00190 dUTP pyrophosphatase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024