+D GENES KO
#
KEGG Orthology (KO) - Candidatus Blochmanniella pennsylvanica
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bpn00010]
D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BPEN_261 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:bpn00020]
D BPEN_341 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D BPEN_384 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BPEN_548 mqo; probable malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bpn00030]
D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BPEN_464 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BPEN_351 ybhE; putative isomerase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D BPEN_485 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BPEN_590 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BPEN_533 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BPEN_532 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
D BPEN_263 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BPEN_356 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
D BPEN_590 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:bpn00051]
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component
D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:bpn00052]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:bpn00500]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bpn00520]
D BPEN_330 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BPEN_331 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D BPEN_103 mrsA; PGM/PMM-family protein K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D BPEN_010 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D BPEN_047 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BPEN_189 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component
D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:bpn00620]
D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BPEN_230 gloB; probable hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BPEN_435 ycbL; putative enzyme with metallo-hydrolase/oxidoreductase domain K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BPEN_548 mqo; probable malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D BPEN_384 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BPEN_137 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bpn00630]
D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:bpn00640]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:bpn00650]
D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:bpn00660]
D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BPEN_135 leuC; 3-isopropylmalate dehydratase subunit 2 K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D BPEN_134 leuD; 3-isopropylmalate dehydratase subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D BPEN_136 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bpn00562]
D BPEN_555 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bpn00190]
D BPEN_509 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D BPEN_508 nuoB; NADH dehydrogenase I chain B, binds FeS cluster N2 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D BPEN_507 nuoCD; NADH dehydrogenase I chain C, D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D BPEN_506 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D BPEN_505 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D BPEN_504 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D BPEN_503 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D BPEN_502 nuoI; NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D BPEN_501 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D BPEN_500 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D BPEN_499 nuoL; NADH dehydrogenase I chain L, membrane subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D BPEN_498 nuoM; NADH dehydrogenase I chain M, membrane subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D BPEN_497 nuoN; NADH dehydrogenase I chain N, membrane subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D BPEN_249 cyoD; cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D BPEN_250 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D BPEN_251 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D BPEN_252 cyoA; cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D BPEN_006 atpA; ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BPEN_008 atpD; ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BPEN_007 atpG; ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BPEN_005 atpH; ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BPEN_009 atpC; ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BPEN_002 atpB; ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BPEN_004 atpF; ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BPEN_003 atpE; ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BPEN_094 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bpn00710]
D BPEN_261 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BPEN_533 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BPEN_263 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BPEN_590 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BPEN_532 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
C 00720 Other carbon fixation pathways [PATH:bpn00720]
D BPEN_384 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BPEN_313 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BPEN_619 metF; 5,10 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00680 Methane metabolism [PATH:bpn00680]
D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism
D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism [PATH:bpn00920]
D BPEN_531 cysP; thiosulfate transport protein (ABC superfamily, peri_bind) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D BPEN_530 cysU; thiosulfate transport protein (ABC superfamily, membrane) K02046 cysU; sulfate/thiosulfate transport system permease protein
D BPEN_529 cysW; thiosulfate permease W protein (ABC superfamily, membrane) K02047 cysW; sulfate/thiosulfate transport system permease protein
D BPEN_528 cysA; sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BPEN_169 cysC; adenosine 5-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D BPEN_091 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D BPEN_165 cysH; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D BPEN_163 cysJ; sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D BPEN_164 cysI; sulfite reductase, beta subunit, NADPH-dependent hemoprotein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D BPEN_625 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BPEN_525 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BPEN_657 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BPEN_620 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bpn00061]
D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BPEN_415 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BPEN_418 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BPEN_514 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BPEN_432 fabA; D-3-hydroxydecanoyl-(acyl carrier-protein) K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D BPEN_290 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:bpn00074]
D BPEN_558 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D BPEN_415 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bpn00561]
D BPEN_419 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D BPEN_061 ygiH; putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D BPEN_068 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:bpn00564]
D BPEN_626 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BPEN_061 ygiH; putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D BPEN_068 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BPEN_285 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BPEN_571 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BPEN_076 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D BPEN_427 pgsA; phosphotidylglycerophosphate synthetase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D BPEN_243 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D BPEN_446 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bpn00230]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BPEN_356 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BPEN_405 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BPEN_575 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BPEN_308 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BPEN_547 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BPEN_553 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BPEN_546 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BPEN_641 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D BPEN_494 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BPEN_495 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BPEN_086 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BPEN_310 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BPEN_129 apaH; bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D BPEN_169 cysC; adenosine 5-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BPEN_542 ureC; putative urease structural subunit C (alpha) K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D BPEN_543 ureB; putative urease structural subunit B (beta) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D BPEN_544 ureA; putative urease structural subunit A (gamma) K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:bpn00240]
D BPEN_127 carB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BPEN_126 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BPEN_281 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BPEN_553 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BPEN_161 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BPEN_392 cmk; cytidine monophosphate (CMP) kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BPEN_651 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D BPEN_538 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D BPEN_494 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BPEN_495 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BPEN_413 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BPEN_638 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BPEN_447 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bpn00250]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_086 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BPEN_405 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BPEN_127 carB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BPEN_126 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
C 00260 Glycine, serine and threonine metabolism [PATH:bpn00260]
D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BPEN_116 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D BPEN_117 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_571 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BPEN_610 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BPEN_443 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D BPEN_442 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bpn00270]
D BPEN_625 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BPEN_525 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BPEN_069 metC; beta-cystathionase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BPEN_652 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D BPEN_259 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BPEN_116 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D BPEN_657 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BPEN_620 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bpn00280]
D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bpn00290]
D BPEN_610 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BPEN_135 leuC; 3-isopropylmalate dehydratase subunit 2 K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D BPEN_134 leuD; 3-isopropylmalate dehydratase subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D BPEN_136 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D BPEN_609 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BPEN_611 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BPEN_137 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bpn00300]
D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BPEN_536 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BPEN_125 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D BPEN_277 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D BPEN_534 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BPEN_600 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BPEN_271 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BPEN_141 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BPEN_142 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bpn00310]
D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:bpn00220]
D BPEN_032 argI; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D BPEN_542 ureC; putative urease structural subunit C (alpha) K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D BPEN_543 ureB; putative urease structural subunit B (beta) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D BPEN_544 ureA; putative urease structural subunit A (gamma) K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BPEN_127 carB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BPEN_126 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:bpn00330]
D BPEN_260 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bpn00340]
D BPEN_477 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D BPEN_484 hisI; phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D BPEN_482 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D BPEN_481 hisH; glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D BPEN_483 hisF; imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D BPEN_480 hisB; histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BPEN_478 hisD; L-histidinal:NAD+ dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:bpn00350]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:bpn00360]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bpn00400]
D BPEN_183 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BPEN_591 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D BPEN_301 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D BPEN_228 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D BPEN_592 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D BPEN_393 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D BPEN_516 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D BPEN_438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BPEN_439 trpG; anthranilate synthase component II: glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D BPEN_440 trpD; anthranilate synthase component II: anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D BPEN_441 trpC; indole-3-glycerolphosphate synthetase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D BPEN_443 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D BPEN_442 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D BPEN_184 tyrA; chorismate mutase T K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D BPEN_185 pheA; chorismate mutase P K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bpn00450]
D BPEN_620 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D BPEN_069 metC; beta-cystathionase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BPEN_652 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D BPEN_373 sufS; selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BPEN_398 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bpn00470]
D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BPEN_618 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BPEN_144 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BPEN_600 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BPEN_271 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bpn00480]
D BPEN_035 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BPEN_485 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BPEN_464 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bpn00540]
D BPEN_291 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BPEN_151 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D BPEN_289 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BPEN_311 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BPEN_292 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BPEN_389 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BPEN_361 kdsA; 3-deoxy-D-manno-octulosonic acid 8-P synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BPEN_387 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BPEN_633 kdtA; Kdo transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D BPEN_423 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D BPEN_233 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BPEN_065 hldE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D BPEN_298 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D BPEN_630 hldD; ADP-L-Glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D BPEN_632 rfaC; ADP-heptose; LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D BPEN_631 rfaF; ADP-heptose; LPS heptosyl transferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
D BPEN_010 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:bpn00550]
D BPEN_047 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BPEN_189 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BPEN_147 murC; UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BPEN_144 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BPEN_141 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BPEN_142 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BPEN_284 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BPEN_063 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BPEN_143 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BPEN_146 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BPEN_159 mrcB; penicillin-binding protein 1b: glycosyl transferase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D BPEN_317 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bpn00552]
D BPEN_063 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bpn00543]
D BPEN_625 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bpn00730]
D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BPEN_246 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D BPEN_244 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BPEN_310 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bpn00740]
D BPEN_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D BPEN_240 ribD; pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BPEN_599 yigB; putative hydrolase of the HAD superfamily K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D BPEN_067 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D BPEN_241 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D BPEN_377 ribE; riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D BPEN_121 ribF; bifunctional: flavokinase; FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bpn00750]
D BPEN_381 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D BPEN_513 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BPEN_131 pdxA; pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit, NAD-dependent dehydrogenase/carboxylase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D BPEN_559 pdxJ; putative pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D BPEN_117 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism
D BPEN_565 yfjB; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bpn00770]
D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D BPEN_609 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BPEN_611 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BPEN_191 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D BPEN_637 dfp; 4'-phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BPEN_634 coaD; CMP-deoxy-D-manno-octulosonate-lipid A transferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BPEN_153 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BPEN_558 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:bpn00780]
D BPEN_514 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BPEN_290 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BPEN_190 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bpn00785]
D BPEN_368 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BPEN_341 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:bpn00790]
D BPEN_487 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D BPEN_062 folB; dihydroneopterin aldolase, also has dihydroneopterin triphosphate K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D BPEN_155 folK; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D BPEN_102 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D BPEN_128 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BPEN_510 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D BPEN_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D BPEN_588 pabA; aminodeoxychorismate synthase subunit II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D BPEN_457 pabB; aminodeoxychorismate synthase subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D BPEN_414 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
C 00670 One carbon pool by folate [PATH:bpn00670]
D BPEN_128 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BPEN_313 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BPEN_575 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BPEN_225 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BPEN_619 metF; 5,10 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D BPEN_264 ygfA; putative ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bpn00860]
D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BPEN_601 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D BPEN_602 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D BPEN_166 cysG; multifunctional siroheme synthase: uroporphyrinogen methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D BPEN_196 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bpn00130]
D BPEN_025 ubiA; 4-hydroxybenzoate octaprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D BPEN_647 ubiD; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D BPEN_267 visC; putative monooxygenase, FAD/NAD(P)-binding domain K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D BPEN_493 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D BPEN_266 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D BPEN_649 ubiE; 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D BPEN_326 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bpn00900]
D BPEN_244 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BPEN_283 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D BPEN_171 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D BPEN_357 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D BPEN_172 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D BPEN_551 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D BPEN_124 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D BPEN_245 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D BPEN_095 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D BPEN_284 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D BPEN_533 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:bpn00261]
D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BPEN_536 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BPEN_125 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bpn00521]
D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BPEN_555 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:bpn00401]
D BPEN_184 tyrA; chorismate mutase T K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D BPEN_438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BPEN_439 trpG; anthranilate synthase component II: glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BPEN_415 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bpn00999]
D BPEN_259 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BPEN_228 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D BPEN_542 ureC; putative urease structural subunit C (alpha) K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D BPEN_543 ureB; putative urease structural subunit B (beta) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D BPEN_544 ureA; putative urease structural subunit A (gamma) K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bpn03020]
D BPEN_577 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BPEN_576 rpoC; DNA-directed RNA polymerase, beta-prime-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BPEN_223 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BPEN_642 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bpn03010]
D BPEN_391 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BPEN_279 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BPEN_204 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BPEN_222 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BPEN_215 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BPEN_088 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BPEN_586 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BPEN_212 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BPEN_051 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BPEN_197 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BPEN_221 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BPEN_587 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BPEN_220 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BPEN_211 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BPEN_111 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BPEN_179 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BPEN_207 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BPEN_089 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BPEN_202 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BPEN_120 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BPEN_059 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BPEN_580 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BPEN_201 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BPEN_198 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BPEN_199 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BPEN_210 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BPEN_213 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BPEN_578 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BPEN_090 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BPEN_579 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BPEN_581 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BPEN_050 rplM; 50S ribosomal subunitprotein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BPEN_208 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BPEN_217 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BPEN_205 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BPEN_224 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BPEN_214 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BPEN_182 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BPEN_365 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BPEN_096 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BPEN_203 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BPEN_200 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BPEN_209 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BPEN_488 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BPEN_097 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BPEN_636 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BPEN_206 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BPEN_621 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BPEN_420 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BPEN_635 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BPEN_014 rmpH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BPEN_364 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BPEN_219 rmpJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BPEN_572 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BPEN_574 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BPEN_229 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bpn00970]
D BPEN_520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BPEN_617 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BPEN_606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_177 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_314 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_517 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_473 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BPEN_616 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BPEN_426 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BPEN_327 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BPEN_573 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BPEN_078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BPEN_605 tRNA-His K14226 tRNA-His; tRNA His
D BPEN_658 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BPEN_105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_604 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_328 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_523 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BPEN_428 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BPEN_329 tRNA-Met K14230 tRNA-Met; tRNA Met
D BPEN_056 tRNA-Met K14230 tRNA-Met; tRNA Met
D BPEN_106 tRNA-Met K14230 tRNA-Met; tRNA Met
D BPEN_070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BPEN_603 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BPEN_489 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BPEN_022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BPEN_176 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_429 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_471 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_472 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_192 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BPEN_195 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BPEN_234 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BPEN_615 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BPEN_193 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BPEN_376 tRNA-Val K14237 tRNA-Val; tRNA Val
D BPEN_522 tRNA-Val K14237 tRNA-Val; tRNA Val
D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BPEN_332 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BPEN_174 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BPEN_433 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BPEN_019 glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BPEN_020 glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BPEN_362 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BPEN_395 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BPEN_312 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BPEN_225 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BPEN_033 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BPEN_122 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BPEN_270 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BPEN_297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BPEN_550 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BPEN_366 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BPEN_367 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BPEN_589 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bpn03060]
D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY
D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE
D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG
D BPEN_238 secD; preprotein translocase, auxillary membrane component K03072 secD; preprotein translocase subunit SecD
D BPEN_239 secF; preprotein translocase, auxillary membrane component K03074 secF; preprotein translocase subunit SecF
D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC
D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BPEN_561 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BPEN_123 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bpn04122]
D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BPEN_430 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D BPEN_404 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BPEN_246 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bpn03018]
D BPEN_272 ygdP; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D BPEN_422 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BPEN_112 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BPEN_113 deaD; cold-shock DeaD box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BPEN_607 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK
D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bpn03030]
D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BPEN_027 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BPEN_058 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D BPEN_231 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BPEN_293 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bpn03410]
D BPEN_383 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BPEN_563 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BPEN_256 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BPEN_449 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bpn03420]
D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bpn03430]
D BPEN_476 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bpn03440]
D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BPEN_276 recB; exonuclease V K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BPEN_274 recC; exonuclease V, gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BPEN_275 recD; exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bpn02010]
D BPEN_531 cysP; thiosulfate transport protein (ABC superfamily, peri_bind) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D BPEN_530 cysU; thiosulfate transport protein (ABC superfamily, membrane) K02046 cysU; sulfate/thiosulfate transport system permease protein
D BPEN_529 cysW; thiosulfate permease W protein (ABC superfamily, membrane) K02047 cysW; sulfate/thiosulfate transport system permease protein
D BPEN_528 cysA; sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D BPEN_408 lolC; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D BPEN_406 lolE; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D BPEN_407 lolD; transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BPEN_036 yjgP; putative transmembrane protein, transport K07091 lptF; lipopolysaccharide export system permease protein
D BPEN_037 yjgQ; putative transmembrane protein, transport K11720 lptG; lipopolysaccharide export system permease protein
D BPEN_043 yhbG; putative transport protein (ABC superfamily, atp_bind) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BPEN_390 msbA; lipid transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:bpn02060]
D BPEN_527 ptsI; PTS family enzyme I and Hpr components, PEP-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BPEN_526 ptsH; PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase K02784 ptsH; phosphocarrier protein HPr
D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component
D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
C 03070 Bacterial secretion system [PATH:bpn03070]
D BPEN_238 secD; preprotein translocase, auxillary membrane component K03072 secD; preprotein translocase subunit SecD
D BPEN_239 secF; preprotein translocase, auxillary membrane component K03074 secF; preprotein translocase subunit SecF
D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE
D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG
D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY
D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC
D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bpn02020]
D BPEN_491 omp; outer membrane protein K09475 ompC; outer membrane pore protein C
D BPEN_175 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bpn02024]
D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein
D BPEN_438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BPEN_439 trpG; anthranilate synthase component II: glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D BPEN_183 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BPEN_026 zur; transcriptional repressor of Zn transport system (Fur family) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D BPEN_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D BPEN_240 ribD; pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE
D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG
D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY
D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC
D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D BPEN_057 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bpn01501]
D BPEN_491 omp; outer membrane protein K09475 ompC; outer membrane pore protein C
D BPEN_317 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bpn01502]
D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BPEN_142 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BPEN_143 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BPEN_146 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bpn01503]
D BPEN_080 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BPEN_646 dsbA; periplasmic protein disulfide isomerase I, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D BPEN_291 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bpn01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:bpn01009]
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:bpn01002]
D BPEN_123 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BPEN_546 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BPEN_424 ybiS; putative exported protein K19235 ybiS; L,D-transpeptidase YbiS
D BPEN_023 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D BPEN_035 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BPEN_534 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D BPEN_466 yebA; conserved protein with LysM domain K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D BPEN_278 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BPEN_101 hflB; HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BPEN_463 htpX; heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D BPEN_286 ecfE; putative membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BPEN_048 degQ; serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D BPEN_253 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BPEN_307 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BPEN_561 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BPEN_450 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D BPEN_306 pmbA; PmbA K03592 pmbA; PmbA protein
D BPEN_305 tldD; TldD K03568 tldD; TldD protein
D BPEN_085 hflC; HflC K04087 hflC; modulator of FtsH protease HflC
D BPEN_084 hflK; HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bpn01003]
D BPEN_159 mrcB; penicillin-binding protein 1b: glycosyl transferase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bpn01005]
D BPEN_291 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BPEN_292 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BPEN_151 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D BPEN_289 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BPEN_311 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BPEN_389 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BPEN_423 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D BPEN_633 kdtA; Kdo transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D BPEN_361 kdsA; 3-deoxy-D-manno-octulosonic acid 8-P synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BPEN_387 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BPEN_632 rfaC; ADP-heptose; LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D BPEN_631 rfaF; ADP-heptose; LPS heptosyl transferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D BPEN_233 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BPEN_298 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D BPEN_065 hldE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D BPEN_630 hldD; ADP-L-Glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bpn01011]
D BPEN_047 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BPEN_189 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BPEN_147 murC; UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BPEN_144 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BPEN_141 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BPEN_618 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BPEN_143 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BPEN_146 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BPEN_063 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BPEN_469 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D BPEN_159 mrcB; penicillin-binding protein 1b: glycosyl transferase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D BPEN_317 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BPEN_424 ybiS; putative exported protein K19235 ybiS; L,D-transpeptidase YbiS
D BPEN_466 yebA; conserved protein with LysM domain K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D BPEN_402 emtA; membrane-bound lytic murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D BPEN_080 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BPEN_375 lpp; murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:bpn01004]
D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BPEN_418 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BPEN_514 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BPEN_432 fabA; D-3-hydroxydecanoyl-(acyl carrier-protein) K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D BPEN_290 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BPEN_419 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D BPEN_061 ygiH; putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D BPEN_068 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bpn01006]
D BPEN_245 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D BPEN_095 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D BPEN_284 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BPEN_081 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BPEN_025 ubiA; 4-hydroxybenzoate octaprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bpn01007]
D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BPEN_332 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BPEN_589 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BPEN_312 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BPEN_122 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BPEN_033 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BPEN_270 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BPEN_433 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BPEN_550 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BPEN_019 glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BPEN_020 glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BPEN_395 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BPEN_297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BPEN_362 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BPEN_174 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BPEN_366 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BPEN_367 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bpn00194]
D BPEN_009 atpC; ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BPEN_008 atpD; ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BPEN_007 atpG; ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BPEN_006 atpA; ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BPEN_005 atpH; ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BPEN_004 atpF; ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BPEN_003 atpE; ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BPEN_002 atpB; ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bpn03000]
D BPEN_380 slyA; transcriptional activator for hemolysin (MarR family) K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D BPEN_026 zur; transcriptional repressor of Zn transport system (Fur family) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D BPEN_403 mntR; transcriptional regulator of mntH, Mn(2+) responsive K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D BPEN_190 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BPEN_258 yqgE; putative transcriptional regulator K07735 algH; putative transcriptional regulator
D BPEN_154 dksA; dosage-dependent dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:bpn03021]
D BPEN_223 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BPEN_577 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BPEN_576 rpoC; DNA-directed RNA polymerase, beta-prime-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BPEN_642 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BPEN_057 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D BPEN_653 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D BPEN_107 nusA; L factor K02600 nusA; transcription termination/antitermination protein NusA
D BPEN_242 nusB; L factor K03625 nusB; transcription antitermination protein NusB
D BPEN_582 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D BPEN_154 dksA; dosage-dependent dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D BPEN_099 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D BPEN_607 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bpn03019]
D BPEN_422 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D BPEN_560 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BPEN_077 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D BPEN_113 deaD; cold-shock DeaD box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BPEN_112 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BPEN_607 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK
D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein
D BPEN_272 ygdP; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D BPEN_175 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:bpn03011]
D BPEN_391 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BPEN_279 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BPEN_204 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BPEN_222 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BPEN_215 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BPEN_088 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BPEN_586 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BPEN_212 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BPEN_051 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BPEN_197 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BPEN_221 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BPEN_587 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BPEN_220 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BPEN_211 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BPEN_111 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BPEN_179 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BPEN_207 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BPEN_089 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BPEN_202 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BPEN_120 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BPEN_059 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BPEN_580 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BPEN_201 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BPEN_198 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BPEN_199 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BPEN_210 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BPEN_213 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BPEN_090 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BPEN_579 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BPEN_581 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BPEN_578 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BPEN_050 rplM; 50S ribosomal subunitprotein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BPEN_208 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BPEN_217 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BPEN_205 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BPEN_224 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BPEN_214 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BPEN_182 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BPEN_365 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BPEN_096 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BPEN_203 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BPEN_200 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BPEN_209 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BPEN_097 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BPEN_636 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BPEN_206 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BPEN_621 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BPEN_420 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BPEN_635 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BPEN_014 rmpH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BPEN_364 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BPEN_219 rmpJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BPEN_488 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BPEN_229 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BPEN_572 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BPEN_574 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bpn03009]
D BPEN_560 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BPEN_077 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D BPEN_098 cgtA; putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D BPEN_154 dksA; dosage-dependent dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D BPEN_107 nusA; L factor K02600 nusA; transcription termination/antitermination protein NusA
D BPEN_242 nusB; L factor K03625 nusB; transcription antitermination protein NusB
D BPEN_582 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D BPEN_130 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BPEN_655 yhhF; putative methyltransferase with SAM-dependent methyltransferase domain K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BPEN_138 mraW; S-adenosyl-dependent methyl transferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BPEN_053 yraL; conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BPEN_087 rlmB; probable tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BPEN_100 rrmJ; Ribosomal RNA large subunit (23S) methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BPEN_552 yfgB; putative pyruvate formate lyase activating enzyme 2 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BPEN_421 rluC; ribosomal large subunit (23S) pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BPEN_187 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BPEN_180 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D BPEN_515 yfcB; N5-glutamine methyltransferase, modifies ribosomal protein L3 K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D BPEN_422 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D BPEN_257 yqgF; putative endonuclease involved in recombination K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D BPEN_113 deaD; cold-shock DeaD box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BPEN_549 engA; putative GTP-binding protein K03977 engA; GTPase
D BPEN_083 hflX; HflX K03665 hflX; GTPase
D BPEN_227 yrdC; putative RNA-binding protein with unique protein fold, with YrdC/RibB domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BPEN_109 rbfA; 30S ribosome-binding factor K02834 rbfA; ribosome-binding factor A
D BPEN_318 ybeB; conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D BPEN_324 ybeY; conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D BPEN_354 ychF; putative GTP-binding protein with nucleoside triP hydrolase domain K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bpn03016]
D BPEN_064 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BPEN_297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BPEN_122 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BPEN_332 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BPEN_270 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BPEN_174 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BPEN_433 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BPEN_362 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BPEN_395 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BPEN_312 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BPEN_033 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BPEN_550 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BPEN_366 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BPEN_367 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BPEN_589 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BPEN_410 ycfF; putative protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BPEN_512 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BPEN_110 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BPEN_227 yrdC; putative RNA-binding protein with unique protein fold, with YrdC/RibB domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BPEN_081 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BPEN_011 trmE; GTPase for tRNA modification and thiophene and furan oxidation K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BPEN_001 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BPEN_091 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D BPEN_013 rnpA; RNase P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BPEN_054 rnpB; rnpB K01978 rnpB; M1 RNA
D BPEN_379 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D BPEN_019 glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BPEN_020 glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BPEN_557 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D BPEN_181 trmD; tRNA(guanine-N1)methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BPEN_404 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BPEN_430 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D BPEN_268 ygfZ; putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D BPEN_236 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BPEN_246 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D BPEN_296 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BPEN_456 yeaZ; putative glycoprotein endopeptidase, actin-like ATPase domain K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BPEN_060 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BPEN_079 yjeE; putative enzyme with nucleoside triP hydrolase domain K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BPEN_112 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bpn03012]
D BPEN_108 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D BPEN_363 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BPEN_280 tsf; protein chain elongation factor Ts K02357 tsf; elongation factor Ts
D BPEN_584 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BPEN_585 fusA; elongation factor G K02355 fusA; elongation factor G
D BPEN_359 prfA; peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1
D BPEN_282 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D BPEN_360 hemK; N5-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BPEN_355 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BPEN_399 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BPEN_074 efp; elongation factor P K02356 efp; elongation factor P
D BPEN_269 prfB; peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bpn03110]
D BPEN_188 clpB; ATP-dependent protease K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D BPEN_254 clpX; ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK
D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BPEN_119 dnaJ; DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BPEN_564 grpE; heat shock protein 24 K03687 GRPE; molecular chaperone GrpE
D BPEN_017 ibpA; heat shock protein A K04080 ibpA; molecular chaperone IbpA
D BPEN_072 groES; GroES K04078 groES; chaperonin GroES
D BPEN_101 hflB; HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BPEN_002 atpB; ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D BPEN_132 surA; peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D BPEN_608 trxA; thioredoxin 1, redox factor K03671 TXN; thioredoxin
D BPEN_628 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D BPEN_378 ydhD; conserved protein with thioredoxin-like domain K07390 grxD; monothiol glutaredoxin
D BPEN_646 dsbA; periplasmic protein disulfide isomerase I, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D BPEN_452 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
C 04131 Membrane trafficking [BR:bpn04131]
D BPEN_553 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:bpn03032]
D BPEN_231 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BPEN_027 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BPEN_058 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BPEN_293 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BPEN_492 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BPEN_016 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:bpn03036]
D BPEN_560 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BPEN_448 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS) K03746 hns; DNA-binding protein H-NS
D BPEN_431 yccV; conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein
D BPEN_149 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D BPEN_170 ygbQ; cell division protein K05589 ftsB; cell division protein FtsB
D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BPEN_397 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BPEN_139 ftsL; cell division protein K03586 ftsL; cell division protein FtsL
D BPEN_148 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ
D BPEN_145 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D BPEN_150 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BPEN_265 ygfE; conserved hypothetical protein K09888 zapA; cell division protein ZapA
D BPEN_080 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BPEN_453 minC; MinC K03610 minC; septum site-determining protein MinC
D BPEN_454 minD; MinD K03609 minD; septum site-determining protein MinD
D BPEN_455 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D BPEN_302 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BPEN_303 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D BPEN_304 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D BPEN_316 mrdB; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D BPEN_001 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BPEN_644 yihA; Probable GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bpn03400]
D BPEN_563 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BPEN_256 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BPEN_383 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BPEN_638 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BPEN_449 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BPEN_577 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BPEN_576 rpoC; DNA-directed RNA polymerase, beta-prime-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BPEN_223 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BPEN_642 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BPEN_476 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D BPEN_276 recB; exonuclease V K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BPEN_274 recC; exonuclease V, gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BPEN_275 recD; exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BPEN_492 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BPEN_016 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BPEN_448 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS) K03746 hns; DNA-binding protein H-NS
D BPEN_494 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BPEN_495 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bpn03029]
D BPEN_108 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D BPEN_363 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BPEN_280 tsf; protein chain elongation factor Ts K02357 tsf; elongation factor Ts
D BPEN_584 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BPEN_585 fusA; elongation factor G K02355 fusA; elongation factor G
D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D BPEN_287 yaeT; outer membrane protein precursor K07277 SAM50; outer membrane protein insertion porin family
D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK
D BPEN_564 grpE; heat shock protein 24 K03687 GRPE; molecular chaperone GrpE
D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BPEN_072 groES; GroES K04078 groES; chaperonin GroES
D BPEN_119 dnaJ; DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BPEN_378 ydhD; conserved protein with thioredoxin-like domain K07390 grxD; monothiol glutaredoxin
D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bpn02000]
D BPEN_390 msbA; lipid transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D BPEN_531 cysP; thiosulfate transport protein (ABC superfamily, peri_bind) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D BPEN_530 cysU; thiosulfate transport protein (ABC superfamily, membrane) K02046 cysU; sulfate/thiosulfate transport system permease protein
D BPEN_529 cysW; thiosulfate permease W protein (ABC superfamily, membrane) K02047 cysW; sulfate/thiosulfate transport system permease protein
D BPEN_528 cysA; sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D BPEN_042 znuB; high-affinity Zn transport protein (ABC superfamily, membrane) K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D BPEN_041 znuC; high-affinity Zn transport protein (ABC superfamily, atp_bind) K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D BPEN_036 yjgP; putative transmembrane protein, transport K07091 lptF; lipopolysaccharide export system permease protein
D BPEN_037 yjgQ; putative transmembrane protein, transport K11720 lptG; lipopolysaccharide export system permease protein
D BPEN_043 yhbG; putative transport protein (ABC superfamily, atp_bind) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BPEN_408 lolC; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D BPEN_406 lolE; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D BPEN_407 lolD; transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BPEN_371 sufC; putative transport protein associated with Fe-S cluster assembly (ABC superfamily, atp_bind) K09013 sufC; Fe-S cluster assembly ATP-binding protein
D BPEN_470 yceL; putative membrane transporter (MFS family) K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D BPEN_527 ptsI; PTS family enzyme I and Hpr components, PEP-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BPEN_526 ptsH; PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase K02784 ptsH; phosphocarrier protein HPr
D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component
D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
D BPEN_075 yjeP; putative membrane protein K22051 mscM; miniconductance mechanosensitive channel
D BPEN_345 tolQ; TolQ K03562 tolQ; biopolymer transport protein TolQ
D BPEN_346 tolR; TolR K03560 tolR; biopolymer transport protein TolR
D BPEN_597 corA; Mg2+/Ni2+/Co2+ transport protein (Mg transport system I) (MIT family) K03284 corA; magnesium transporter
D BPEN_491 omp; outer membrane protein K09475 ompC; outer membrane pore protein C
D BPEN_400 oprC; OprC K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BPEN_287 yaeT; outer membrane protein precursor K07277 SAM50; outer membrane protein insertion porin family
D BPEN_186 yfiO; putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D BPEN_566 smpA; small membrane protein A K06186 bamE; outer membrane protein assembly factor BamE
D BPEN_092 ytfM; putative outer membrane protein K07278 tamA; translocation and assembly module TamA
D BPEN_093 ytfN; putative exported protein K09800 tamB; translocation and assembly module TamB
D BPEN_044 yhbN; putative transport protein (ABC superfamily, peri_bind) K09774 lptA; lipopolysaccharide export system protein LptA
D BPEN_045 yrbK; possible exported protein K11719 lptC; lipopolysaccharide export system protein LptC
D BPEN_133 imp; organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D BPEN_320 rlpB; rare lipoprotein B precursor K03643 lptE; LPS-assembly lipoprotein
D BPEN_323 ybeX; putative integral membrane protein with CBS regulatory domain K06189 corC; hemolysin (HlyC) family protein
D BPEN_570 emrE; auxillary multidrug transport protein (SMR family) K03297 emrE; small multidrug resistance pump
D BPEN_024 pitA; low-affinity phosphate transport protein (PiT family) K16322 pit; low-affinity inorganic phosphate transporter
D BPEN_030 gltP; glutamate:aspartate symporter (DAACS family) K11102 gltP; proton glutamate symport protein
D BPEN_029 yjcE; putative sodium:hydrogen antiporter (CPA1 family) K24163 nhaK; monovalent cation/hydrogen antiporter
D BPEN_519 nupC; nucleoside transport protein (NUP family) K11535 nupC; nucleoside transport protein
D BPEN_518 mntH; manganese/divalent cation transport protein (NRAMP family) K03322 mntH; manganese transport protein
D BPEN_469 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D BPEN_145 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D BPEN_445 tonB; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins K03832 tonB; periplasmic protein TonB
D BPEN_349 pal; Pal K03640 pal; peptidoglycan-associated lipoprotein
D BPEN_347 tolA; TolA K03646 tolA; colicin import membrane protein
D BPEN_348 tolB; TolB K03641 tolB; TolB protein
C 02044 Secretion system [BR:bpn02044]
D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D BPEN_238 secD; preprotein translocase, auxillary membrane component K03072 secD; preprotein translocase subunit SecD
D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE
D BPEN_239 secF; preprotein translocase, auxillary membrane component K03074 secF; preprotein translocase subunit SecF
D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG
D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY
D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC
D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bpn04812]
D BPEN_302 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BPEN_150 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BPEN_149 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D BPEN_453 minC; MinC K03610 minC; septum site-determining protein MinC
D BPEN_454 minD; MinD K03609 minD; septum site-determining protein MinD
D BPEN_455 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
C 04147 Exosome [BR:bpn04147]
D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BPEN_261 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BPEN_235 ahpC; alkyl hydroperoxide reductase C22 protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK
D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BPEN_547 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BPEN_584 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D BPEN_410 ycfF; putative protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BPEN_310 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BPEN_308 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BPEN_575 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BPEN_464 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bpn02048]
D BPEN_150 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BPEN_302 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bpn03100]
D BPEN_520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BPEN_617 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BPEN_606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_177 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_314 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_517 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BPEN_473 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BPEN_616 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BPEN_426 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BPEN_327 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BPEN_573 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BPEN_078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BPEN_605 tRNA-His K14226 tRNA-His; tRNA His
D BPEN_658 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BPEN_105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_604 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_328 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BPEN_523 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BPEN_428 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BPEN_329 tRNA-Met K14230 tRNA-Met; tRNA Met
D BPEN_056 tRNA-Met K14230 tRNA-Met; tRNA Met
D BPEN_106 tRNA-Met K14230 tRNA-Met; tRNA Met
D BPEN_070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BPEN_603 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BPEN_489 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BPEN_022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BPEN_176 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_429 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_471 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_472 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BPEN_192 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BPEN_195 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BPEN_234 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BPEN_615 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BPEN_193 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BPEN_376 tRNA-Val K14237 tRNA-Val; tRNA Val
D BPEN_522 tRNA-Val K14237 tRNA-Val; tRNA Val
D BPEN_572 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BPEN_574 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BPEN_229 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BPEN_054 rnpB; rnpB K01978 rnpB; M1 RNA
D BPEN_569 tmRNA; ortholog to E. coli bnum: b2621; MultiFun: Cell structure 6.6; Information transfer 2.2.6, 2.3.6 K15035 ssrA; transfer-messenger RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BPEN_537 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D BPEN_622 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D BPEN_322 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D BPEN_273 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BPEN_411 ycfH; putative metallo-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BPEN_334 ybfF; putative enzyme with alpha/beta-Hydrolase domain K01175 ybfF; esterase [EC:3.1.-.-]
D BPEN_226 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BPEN_031 yjgF; putative translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D BPEN_474 gutQ; putative phosphosugar binding protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D BPEN_496 yfaE; conserved hypothetical protein with 2Fe-2S ferredoxin-like domain K11107 yfaE; ferredoxin
D BPEN_333 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D BPEN_648 ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D BPEN_462 cspC; cold shock-like protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D BPEN_541 ureF; putative urease accessory protein F K03188 ureF; urease accessory protein
D BPEN_540 ureG; putative urease accessory protein G K03189 ureG; urease accessory protein
D BPEN_545 ureD; putative urease accessory protein D K03190 ureD; urease accessory protein
D BPEN_568 smpB; small protein B; putative tmRNA-binding protein K03664 smpB; SsrA-binding protein
D BPEN_593 gntY; membrane-bound protein in GNT I transport system K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D BPEN_650 yigN; putative membrane protein K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
D BPEN_409 ycfM; putative fibronectin-binding protein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D BPEN_325 phoL; putative ATP-binding protein in pho regulon K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D BPEN_396 lolA; LolA K03634 lolA; outer membrane lipoprotein carrier protein
D BPEN_358 lolB; outer membrane lipoprotein precursor K02494 lolB; outer membrane lipoprotein LolB
D BPEN_288 hlpA; histone-like protein K06142 hlpA; outer membrane protein
D BPEN_173 nlpD; lipoprotein NlpD precursor K06194 nlpD; lipoprotein NlpD
C 99994 Others
D BPEN_071 cutA; periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BPEN_160 yadR; conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D BPEN_369 sufA; Fe-S cluster assembly protein K05997 sufA; Fe-S cluster assembly protein SufA
D BPEN_370 sufB; putative transport protein associated with Fe-S cluster assembly K09014 sufB; Fe-S cluster assembly protein SufB
D BPEN_372 sufD; SufD K09015 sufD; Fe-S cluster assembly protein SufD
D BPEN_374 sufE; SufE K02426 sufE; cysteine desulfuration protein SufE
C 99997 Function unknown
D BPEN_353 ybhL; putative transport protein K06890 K06890; uncharacterized protein
D BPEN_388 ycaR; conserved hypothetical protein K09791 K09791; uncharacterized protein
D BPEN_475 yeeX; conserved hypothetical protein K09802 K09802; uncharacterized protein
D BPEN_049 yhcB; conserved hypothetical protein K09908 K09908; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024