+D GENES KO #

  KEGG Orthology (KO) - Butyrate-producing bacterium SS3/4

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bprs00010] D CK3_08420 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_21060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_03090 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_08330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_21750 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_24450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_31600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_09800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CK3_00680 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CK3_33080 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CK3_33100 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CK3_33090 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CK3_03930 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CK3_17780 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CK3_03250 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CK3_01750 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_13550 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_34650 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CK3_28860 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CK3_22510 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CK3_28080 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_34370 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CK3_33230 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:bprs00020] D CK3_23360 Isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D CK3_06440 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CK3_06430 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CK3_34370 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CK3_28860 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:bprs00030] D CK3_08330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CK3_12250 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D CK3_28620 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CK3_08400 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CK3_31550 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2] D CK3_12280 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CK3_29380 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CK3_34630 Sugar kinases, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15] D CK3_34640 Transcriptional regulators K00852 rbsK; ribokinase [EC:2.7.1.15] D CK3_29370 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_08810 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CK3_24930 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CK3_09000 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CK3_25060 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CK3_08990 Sugar kinases, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D CK3_31460 Sugar kinases, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D CK3_00680 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CK3_09800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_21750 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_24450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_31600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:bprs00040] D CK3_23870 4-deoxy-L-threo-5-hexulose uronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D CK3_01990 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D CK3_04230 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D CK3_04220 D-altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D CK3_17940 Altronate dehydratase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D CK3_01940 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D CK3_01150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CK3_28620 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CK3_08560 Sugar (pentulose and hexulose) kinases K00854 xylB; xylulokinase [EC:2.7.1.17] D CK3_03130 ABC-type sugar transport system, auxiliary component K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] C 00051 Fructose and mannose metabolism [PATH:bprs00051] D CK3_03160 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CK3_03210 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CK3_00750 histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_21750 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_24450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_31600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_09800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CK3_00680 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CK3_33080 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CK3_12280 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:bprs00052] D CK3_28080 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CK3_32840 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CK3_23010 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CK3_24210 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CK3_13770 Nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_08420 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_21060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_03090 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_00900 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CK3_20310 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_21750 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_24450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_31600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_25070 2-keto-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] C 00053 Ascorbate and aldarate metabolism D CK3_01150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:bprs00500] D CK3_10620 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CK3_09650 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_09660 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_33840 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_33850 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_34670 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D CK3_04040 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CK3_08060 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CK3_18080 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CK3_08070 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CK3_00300 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CK3_00500 Type II secretory pathway, pullulanase PulA and related glycosidases K01214 ISA; isoamylase [EC:3.2.1.68] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_08420 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_21060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_03090 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_08330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CK3_03160 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CK3_03210 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bprs00520] D CK3_21040 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CK3_21050 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CK3_03160 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CK3_03210 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CK3_01210 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CK3_27720 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CK3_03400 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CK3_28050 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CK3_12060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CK3_04520 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CK3_33230 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CK3_08420 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_21060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_03090 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_01150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CK3_32840 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CK3_23010 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CK3_24210 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CK3_13770 Nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CK3_00900 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CK3_20310 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CK3_08330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CK3_00750 histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D CK3_10620 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CK3_10640 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D CK3_10650 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D CK3_09650 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_09660 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_33840 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CK3_33850 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:bprs00620] D CK3_28860 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CK3_03040 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CK3_27360 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CK3_27350 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CK3_01750 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_13550 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_20750 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CK3_20770 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CK3_30750 FAD/FMN-containing dehydrogenases K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D CK3_22510 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CK3_00260 Lactoylglutathione lyase and related lyases K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CK3_15080 Lactoylglutathione lyase and related lyases K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CK3_04100 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CK3_14940 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CK3_17920 Uncharacterized conserved protein K22373 larA; lactate racemase [EC:5.1.2.1] D CK3_21660 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CK3_31490 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D CK3_10290 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_31500 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_06440 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CK3_06430 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CK3_34370 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CK3_34650 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_03410 2-isopropylmalate synthase, yeast type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bprs00630] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_13570 Lactate dehydrogenase and related dehydrogenases K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D CK3_15680 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CK3_31630 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CK3_00690 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_27410 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_13580 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CK3_09620 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D CK3_09000 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CK3_25060 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:bprs00640] D CK3_27360 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CK3_27350 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CK3_03040 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CK3_18870 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CK3_20750 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CK3_20770 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CK3_22510 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CK3_25420 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D CK3_09620 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:bprs00650] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17850 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CK3_18890 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CK3_18900 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CK3_17830 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CK3_18870 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CK3_23950 glutaconyl-CoA decarboxylase alpha subunit K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5] D CK3_10290 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_31500 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_23900 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CK3_31510 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CK3_23890 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CK3_31520 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CK3_23930 glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D CK3_03040 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CK3_28860 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CK3_33760 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CK3_35220 Threonine dehydrogenase and related Zn-dependent dehydrogenases K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D CK3_13760 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34530 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34740 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34540 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_34730 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:bprs00660] D CK3_13760 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34530 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34740 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34540 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_34730 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_21400 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CK3_21420 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CK3_21430 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CK3_17480 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D CK3_33080 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bprs00190] D CK3_10040 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CK3_10060 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CK3_10050 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CK3_10030 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CK3_10070 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CK3_10000 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CK3_10010 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CK3_07750 Archaeal/vacuolar-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CK3_07730 Archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CK3_07800 Archaeal/vacuolar-type H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D CK3_07720 H(+)-transporting ATP synthase, vacuolar type, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CK3_07770 Archaeal/vacuolar-type H+-ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D CK3_07780 ATP synthase subunit C. K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CK3_08430 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D CK3_16500 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bprs00710] D CK3_33090 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CK3_33100 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CK3_00680 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CK3_09800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CK3_08400 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CK3_12280 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CK3_33080 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CK3_28620 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CK3_31550 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2] D CK3_34370 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CK3_34650 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:bprs00720] D CK3_28860 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CK3_34650 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CK3_06440 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CK3_06430 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_20750 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CK3_20770 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CK3_28740 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CK3_18760 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CK3_18770 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D CK3_27350 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CK3_27360 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:bprs00680] D CK3_13570 Lactate dehydrogenase and related dehydrogenases K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D CK3_03250 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CK3_00680 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CK3_09800 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_21750 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_24450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_31600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CK3_27360 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CK3_27350 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CK3_03930 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CK3_17780 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CK3_17860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17370 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_34440 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_33780 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17380 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CK3_30770 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:bprs00910] D CK3_09570 Sulfite reductase, beta subunit (hemoprotein) K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1] D CK3_07660 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CK3_20790 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CK3_34450 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CK3_00690 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_27410 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_16320 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CK3_29150 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:bprs00920] D CK3_08650 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D CK3_08670 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D CK3_08660 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CK3_01000 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CK3_16930 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CK3_18200 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CK3_16690 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bprs00061] D CK3_20750 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CK3_20770 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CK3_20700 acyl carrier protein K02078 acpP; acyl carrier protein D CK3_16280 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein D CK3_27500 acyl carrier protein K02078 acpP; acyl carrier protein D CK3_20720 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CK3_20690 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CK3_20740 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CK3_07290 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_19210 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20730 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20760 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CK3_20710 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bprs00071] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_18870 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bprs00561] D CK3_13580 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CK3_07990 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CK3_27490 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CK3_24960 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CK3_16540 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:bprs00564] D CK3_24970 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CK3_08020 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CK3_24960 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CK3_16540 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CK3_24570 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CK3_28280 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CK3_06690 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CK3_28790 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CK3_06680 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bprs00230] D CK3_01890 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CK3_09780 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CK3_29370 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_08810 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CK3_24930 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CK3_24320 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CK3_16000 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CK3_16010 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CK3_24420 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CK3_16020 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CK3_16030 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CK3_24040 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CK3_24330 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CK3_28010 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CK3_28020 IMP cyclohydrolase-like protein. K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D CK3_15560 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CK3_34760 hypothetical protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CK3_34380 Purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CK3_28100 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CK3_25570 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CK3_01560 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CK3_32080 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CK3_09890 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CK3_31730 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D CK3_03460 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CK3_28310 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CK3_20500 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CK3_14560 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CK3_02300 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CK3_21360 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CK3_22750 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CK3_23210 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1] D CK3_04110 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CK3_16520 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CK3_13660 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D CK3_16240 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D CK3_14500 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D CK3_31390 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CK3_24350 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CK3_00410 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CK3_07490 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D CK3_06290 Dihydroorotase and related cyclic amidohydrolases K01466 allB; allantoinase [EC:3.5.2.5] D CK3_29150 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:bprs00240] D CK3_23160 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CK3_23150 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CK3_23380 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CK3_23370 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CK3_00270 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CK3_33730 Predicted amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CK3_16090 dihydroorotate dehydrogenase (subfamily 1) family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CK3_16100 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D CK3_16080 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CK3_16110 orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CK3_24540 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CK3_33400 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CK3_32160 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CK3_12300 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CK3_23280 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CK3_00450 Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CK3_23130 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CK3_28040 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CK3_29390 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CK3_02300 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CK3_21360 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CK3_22750 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CK3_14560 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CK3_09480 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CK3_16470 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CK3_24770 Predicted amidohydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CK3_06300 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_06330 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_30780 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bprs00250] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_16570 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CK3_29430 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CK3_18780 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CK3_18950 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CK3_24350 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CK3_24330 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CK3_23380 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CK3_23370 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CK3_16320 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CK3_34450 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CK3_00690 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_27410 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_23160 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CK3_23150 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CK3_19240 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_18260 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_01210 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CK3_27720 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CK3_24320 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:bprs00260] D CK3_04020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CK3_28090 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CK3_13890 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CK3_18620 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CK3_30770 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D CK3_00670 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CK3_09390 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D CK3_13570 Lactate dehydrogenase and related dehydrogenases K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D CK3_13580 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CK3_03930 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CK3_17780 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CK3_17860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17370 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_34440 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_33780 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17380 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CK3_19110 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CK3_19120 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CK3_27540 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CK3_08580 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CK3_08570 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CK3_07620 Predicted deacylase K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] C 00270 Cysteine and methionine metabolism [PATH:bprs00270] D CK3_01000 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CK3_16930 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CK3_18200 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CK3_19310 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CK3_17900 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CK3_22670 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CK3_01590 Methionine synthase I (cobalamin-dependent), methyltransferase domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D CK3_12070 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CK3_17630 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CK3_08310 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CK3_25570 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CK3_07500 Cytosine deaminase and related metal-dependent hydrolases K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CK3_02200 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_35420 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_21960 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_00510 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CK3_04020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CK3_28090 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CK3_13890 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CK3_18620 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CK3_16690 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CK3_15580 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CK3_18320 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_22510 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CK3_19110 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CK3_19120 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CK3_17860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17370 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_34440 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_33780 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17380 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bprs00280] D CK3_18320 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CK3_18870 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CK3_33760 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bprs00290] D CK3_27540 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CK3_21400 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CK3_21420 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CK3_21430 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CK3_17480 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CK3_13760 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34530 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34740 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34540 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_34730 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_34720 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CK3_32670 Dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CK3_34710 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CK3_18320 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CK3_03410 2-isopropylmalate synthase, yeast type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:bprs00300] D CK3_13890 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CK3_18620 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CK3_04020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CK3_28090 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CK3_24270 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CK3_24280 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CK3_23500 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CK3_17560 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CK3_04450 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CK3_27440 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CK3_01760 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CK3_21290 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D CK3_28730 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CK3_28720 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:bprs00220] D CK3_23510 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CK3_18780 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CK3_18950 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CK3_19240 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_18260 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_00690 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_27410 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_23160 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CK3_23150 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CK3_29150 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CK3_34450 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_23490 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CK3_23480 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CK3_23500 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:bprs00330] D CK3_00570 Uncharacterized protein, putative amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D CK3_09460 Uncharacterized protein, putative amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D CK3_27400 Uncharacterized protein, putative amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D CK3_17640 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D CK3_17500 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D CK3_17490 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D CK3_17630 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CK3_01880 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CK3_25230 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism D CK3_11460 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00350 Tyrosine metabolism [PATH:bprs00350] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_11460 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:bprs00360] D CK3_12520 uncharacterized domain 1 K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CK3_13480 uncharacterized domain 1 K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CK3_17850 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CK3_18890 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_11460 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CK3_33700 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bprs00400] D CK3_00170 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CK3_22560 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CK3_27680 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D CK3_18400 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D CK3_08450 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CK3_09060 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CK3_17100 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CK3_24890 5-enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CK3_12260 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CK3_08580 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CK3_08570 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CK3_16530 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CK3_13880 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D CK3_24900 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_11460 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:bprs00410] D CK3_24770 Predicted amidohydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CK3_06300 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_06330 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_30780 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_18870 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:bprs00430] D CK3_20610 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CK3_27350 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CK3_27360 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:bprs00450] D CK3_19310 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CK3_17900 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CK3_22670 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CK3_01590 Methionine synthase I (cobalamin-dependent), methyltransferase domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D CK3_11700 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CK3_07190 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CK3_19180 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CK3_14590 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CK3_12380 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs K12529 ygfM; putative selenate reductase FAD-binding subunit D CK3_21230 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:bprs00460] D CK3_20610 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CK3_16570 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CK3_29430 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] C 00470 D-Amino acid metabolism [PATH:bprs00470] D CK3_17890 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CK3_31760 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CK3_11810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CK3_19240 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_18260 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_17170 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CK3_34090 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CK3_04450 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CK3_01760 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:bprs00480] D CK3_20610 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CK3_14050 Uncharacterized proteins, homologs of lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CK3_17630 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:bprs00540] D CK3_01120 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CK3_10570 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CK3_00760 Predicted kinase related to galactokinase and mevalonate kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bprs00541] D CK3_24210 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CK3_13770 Nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CK3_00900 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CK3_20310 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CK3_01150 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CK3_03360 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CK3_03380 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CK3_20280 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CK3_03390 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CK3_10620 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CK3_10640 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D CK3_10650 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D CK3_28050 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:bprs00550] D CK3_12060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CK3_04520 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CK3_08760 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CK3_34090 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CK3_28730 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CK3_11810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CK3_28720 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CK3_24560 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CK3_20380 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CK3_08270 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CK3_30710 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CK3_34110 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CK3_34130 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CK3_07700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_16900 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_15600 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_22980 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_25430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_22700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:bprs00552] D CK3_20380 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CK3_13820 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bprs00543] D CK3_27260 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI D CK3_01000 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CK3_16930 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bprs00730] D CK3_22250 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CK3_15530 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_33590 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_33580 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CK3_18460 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CK3_22110 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CK3_22240 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CK3_28610 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D CK3_22260 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:bprs00740] D CK3_11970 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CK3_11950 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CK3_11980 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CK3_11960 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CK3_16990 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CK3_22110 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CK3_01890 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CK3_09780 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:bprs00750] D CK3_28590 Pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CK3_17380 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CK3_00670 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:bprs00760] D CK3_18100 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CK3_34380 Purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CK3_28100 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CK3_27060 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CK3_15820 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CK3_32040 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CK3_05310 Amidases related to nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CK3_09030 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CK3_18440 Predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:bprs00770] D CK3_13760 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34530 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34740 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CK3_34540 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_34730 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CK3_34720 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CK3_32670 Dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CK3_34710 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CK3_14980 Ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CK3_33260 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CK3_23850 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CK3_17600 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D CK3_17590 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CK3_26750 pantetheine-phosphate adenylyltransferase, bacterial K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CK3_27980 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CK3_31780 phosphopantethiene--protein transferase domain K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CK3_18320 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CK3_24770 Predicted amidohydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CK3_06300 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_06330 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CK3_30780 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] C 00780 Biotin metabolism [PATH:bprs00780] D CK3_20740 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CK3_07290 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_19210 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20730 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20760 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CK3_16830 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CK3_16840 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CK3_18690 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CK3_31980 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:bprs00790] D CK3_11970 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CK3_09180 Metal-dependent hydrolases of the beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D CK3_12330 Uncharacterized MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] C 00670 One carbon pool by folate [PATH:bprs00670] D CK3_28740 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CK3_18760 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CK3_18770 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D CK3_16010 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CK3_28010 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CK3_28690 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CK3_22670 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CK3_01590 Methionine synthase I (cobalamin-dependent), methyltransferase domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D CK3_25250 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bprs00860] D CK3_34230 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CK3_28540 porphobilinogen deaminase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CK3_28890 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D CK3_27580 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CK3_28550 precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D CK3_28500 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D CK3_28510 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D CK3_32110 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D CK3_28530 Cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D CK3_28490 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D CK3_28410 Precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D CK3_28480 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CK3_34210 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CK3_24260 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CK3_28430 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CK3_32100 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CK3_28460 cobalamin 5'-phosphate synthase/cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CK3_28470 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CK3_28450 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CK3_32090 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bprs00900] D CK3_18460 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CK3_24580 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CK3_20180 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CK3_10790 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CK3_29320 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CK3_24600 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CK3_32150 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_18470 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CK3_24560 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:bprs00903] D CK3_29550 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation D CK3_33760 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CK3_08400 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:bprs00523] D CK3_03360 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CK3_03380 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CK3_20280 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CK3_03390 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CK3_03380 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D CK3_08870 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis D CK3_25230 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] C 00261 Monobactam biosynthesis [PATH:bprs00261] D CK3_04020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CK3_28090 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CK3_24270 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CK3_24280 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bprs00521] D CK3_08420 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_21060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_03090 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_05150 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CK3_03360 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CK3_03380 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CK3_20280 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CK3_03390 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CK3_08420 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_21060 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CK3_03090 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:bprs00525] D CK3_03360 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CK3_03380 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:bprs00401] D CK3_24900 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_11460 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CK3_16350 Zn-dependent hydrolases, including glyoxylases K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32] C 00333 Prodigiosin biosynthesis D CK3_20720 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CK3_07290 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_19210 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20730 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CK3_20700 acyl carrier protein K02078 acpP; acyl carrier protein D CK3_16280 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein D CK3_27500 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CK3_12070 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:bprs00362] D CK3_33700 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D CK3_15010 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CK3_23950 glutaconyl-CoA decarboxylase alpha subunit K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5] D CK3_10290 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_31500 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_23900 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CK3_31510 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CK3_23890 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CK3_31520 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CK3_17850 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CK3_18890 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D CK3_00280 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D CK3_00280 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation D CK3_33700 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation D CK3_23930 glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation D CK3_29550 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00363 Bisphenol degradation C 00621 Dioxin degradation D CK3_33700 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bprs03020] D CK3_13410 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CK3_13420 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CK3_28300 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CK3_24380 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bprs03010] D CK3_13650 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CK3_23580 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D CK3_19570 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CK3_19360 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CK3_19460 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CK3_09120 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D CK3_19490 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CK3_14110 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D CK3_19640 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CK3_19370 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CK3_13500 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CK3_19380 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CK3_19500 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CK3_16970 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D CK3_25480 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D CK3_09140 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D CK3_19590 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D CK3_25050 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D CK3_10540 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1 D CK3_19600 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CK3_19630 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3 D CK3_19620 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D CK3_19480 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D CK3_10560 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D CK3_09220 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D CK3_10550 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CK3_10530 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CK3_14100 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CK3_19530 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CK3_19440 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CK3_19560 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CK3_19340 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D CK3_19470 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CK3_25520 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19 D CK3_29710 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CK3_27010 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D CK3_19580 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D CK3_19610 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CK3_19520 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CK3_17180 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D CK3_27030 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CK3_28210 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D CK3_19450 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D CK3_03310 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D CK3_27380 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CK3_06530 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D CK3_29720 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 C 00970 Aminoacyl-tRNA biosynthesis [PATH:bprs00970] D CK3_T_35790 CK3_T_35790 K14218 tRNA-Ala; tRNA Ala D CK3_T_36000 CK3_T_36000 K14219 tRNA-Arg; tRNA Arg D CK3_T_35540 CK3_T_35540 K14219 tRNA-Arg; tRNA Arg D CK3_T_35980 CK3_T_35980 K14219 tRNA-Arg; tRNA Arg D CK3_T_35950 CK3_T_35950 K14219 tRNA-Arg; tRNA Arg D CK3_T_35880 CK3_T_35880 K14220 tRNA-Asn; tRNA Asn D CK3_T_35730 CK3_T_35730 K14220 tRNA-Asn; tRNA Asn D CK3_T_35580 CK3_T_35580 K14221 tRNA-Asp; tRNA Asp D CK3_T_35920 CK3_T_35920 K14221 tRNA-Asp; tRNA Asp D CK3_T_35690 CK3_T_35690 K14223 tRNA-Gln; tRNA Gln D CK3_T_35990 CK3_T_35990 K14223 tRNA-Gln; tRNA Gln D CK3_T_35970 CK3_T_35970 K14223 tRNA-Gln; tRNA Gln D CK3_T_35960 CK3_T_35960 K14223 tRNA-Gln; tRNA Gln D CK3_T_35890 CK3_T_35890 K14224 tRNA-Glu; tRNA Glu D CK3_T_35570 CK3_T_35570 K14224 tRNA-Glu; tRNA Glu D CK3_T_35670 CK3_T_35670 K14224 tRNA-Glu; tRNA Glu D CK3_T_35490 CK3_T_35490 K14225 tRNA-Gly; tRNA Gly D CK3_T_35530 CK3_T_35530 K14225 tRNA-Gly; tRNA Gly D CK3_T_35650 CK3_T_35650 K14225 tRNA-Gly; tRNA Gly D CK3_T_36020 CK3_T_36020 K14225 tRNA-Gly; tRNA Gly D CK3_T_35550 CK3_T_35550 K14226 tRNA-His; tRNA His D CK3_T_35850 CK3_T_35850 K14228 tRNA-Leu; tRNA Leu D CK3_T_35500 CK3_T_35500 K14228 tRNA-Leu; tRNA Leu D CK3_T_35940 CK3_T_35940 K14228 tRNA-Leu; tRNA Leu D CK3_T_35780 CK3_T_35780 K14228 tRNA-Leu; tRNA Leu D CK3_T_35510 CK3_T_35510 K14229 tRNA-Lys; tRNA Lys D CK3_T_35640 CK3_T_35640 K14229 tRNA-Lys; tRNA Lys D CK3_T_35750 CK3_T_35750 K14229 tRNA-Lys; tRNA Lys D CK3_T_35910 CK3_T_35910 K14230 tRNA-Met; tRNA Met D CK3_T_35620 CK3_T_35620 K14230 tRNA-Met; tRNA Met D CK3_T_35720 CK3_T_35720 K14230 tRNA-Met; tRNA Met D CK3_T_35760 CK3_T_35760 K14230 tRNA-Met; tRNA Met D CK3_T_35840 CK3_T_35840 K14230 tRNA-Met; tRNA Met D CK3_T_35830 CK3_T_35830 K14230 tRNA-Met; tRNA Met D CK3_T_35480 CK3_T_35480 K14231 tRNA-Phe; tRNA Phe D CK3_T_35630 CK3_T_35630 K14231 tRNA-Phe; tRNA Phe D CK3_T_35520 CK3_T_35520 K14232 tRNA-Pro; tRNA Pro D CK3_T_35560 CK3_T_35560 K14232 tRNA-Pro; tRNA Pro D CK3_T_35660 CK3_T_35660 K14232 tRNA-Pro; tRNA Pro D CK3_T_35800 CK3_T_35800 K14232 tRNA-Pro; tRNA Pro D CK3_T_35860 CK3_T_35860 K14233 tRNA-Ser; tRNA Ser D CK3_T_35710 CK3_T_35710 K14233 tRNA-Ser; tRNA Ser D CK3_T_36010 CK3_T_36010 K14233 tRNA-Ser; tRNA Ser D CK3_T_35870 CK3_T_35870 K14233 tRNA-Ser; tRNA Ser D CK3_T_35900 CK3_T_35900 K14234 tRNA-Thr; tRNA Thr D CK3_T_35600 CK3_T_35600 K14234 tRNA-Thr; tRNA Thr D CK3_T_35680 CK3_T_35680 K14234 tRNA-Thr; tRNA Thr D CK3_T_35770 CK3_T_35770 K14234 tRNA-Thr; tRNA Thr D CK3_T_35810 CK3_T_35810 K14235 tRNA-Trp; tRNA Trp D CK3_T_35470 CK3_T_35470 K14236 tRNA-Tyr; tRNA Tyr D CK3_T_35700 CK3_T_35700 K14236 tRNA-Tyr; tRNA Tyr D CK3_T_35610 CK3_T_35610 K14236 tRNA-Tyr; tRNA Tyr D CK3_T_35930 CK3_T_35930 K14237 tRNA-Val; tRNA Val D CK3_T_35590 CK3_T_35590 K14237 tRNA-Val; tRNA Val D CK3_T_35820 CK3_T_35820 K14237 tRNA-Val; tRNA Val D CK3_34230 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CK3_27470 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CK3_27480 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CK3_27460 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CK3_31450 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CK3_28910 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CK3_25040 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CK3_04150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CK3_27450 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CK3_09600 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CK3_33410 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CK3_27630 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CK3_28580 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CK3_29310 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CK3_21230 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CK3_28690 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CK3_31220 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CK3_29100 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CK3_18090 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CK3_22680 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CK3_34320 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CK3_04140 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CK3_30650 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CK3_30640 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CK3_10130 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bprs03060] D CK3_19430 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CK3_10510 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CK3_10360 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D CK3_10380 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CK3_06560 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CK3_19080 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CK3_25470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CK3_27530 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CK3_04030 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D CK3_32470 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89] D CK3_25530 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89] D CK3_20320 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CK3_27690 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bprs04122] D CK3_15530 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_33590 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_15510 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CK3_33580 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:bprs03018] D CK3_03250 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CK3_16960 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CK3_30580 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CK3_12210 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CK3_13310 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_33800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CK3_31400 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CK3_16500 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:bprs03030] D CK3_09500 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CK3_04480 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CK3_24620 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CK3_21760 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CK3_20510 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CK3_33940 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CK3_06490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CK3_09230 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CK3_09130 single stranded DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D CK3_25000 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CK3_25550 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CK3_27990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C 03410 Base excision repair [PATH:bprs03410] D CK3_00180 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CK3_16270 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CK3_20390 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CK3_15140 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CK3_00480 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CK3_33300 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CK3_27990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CK3_19770 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:bprs03420] D CK3_02990 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CK3_03440 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D CK3_16820 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D CK3_34220 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CK3_27990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CK3_24380 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:bprs03430] D CK3_21480 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D CK3_25290 DNA mismatch repair enzyme (predicted ATPase) K03572 mutL; DNA mismatch repair protein MutL D CK3_34220 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CK3_18490 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CK3_18480 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CK3_19770 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CK3_09130 single stranded DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D CK3_04480 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CK3_24620 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CK3_06490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CK3_21760 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CK3_33940 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CK3_20510 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CK3_09500 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03440 Homologous recombination [PATH:bprs03440] D CK3_19770 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CK3_09130 single stranded DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D CK3_06470 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CK3_33430 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CK3_21780 recombination protein RecR K06187 recR; recombination protein RecR D CK3_01850 protein RecA K03553 recA; recombination protein RecA D CK3_27990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CK3_24150 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CK3_03980 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CK3_28180 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CK3_19160 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CK3_10450 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CK3_04480 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CK3_24620 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CK3_06490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CK3_21760 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CK3_33940 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CK3_20510 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CK3_09500 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CK3_28710 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bprs02010] D CK3_08650 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D CK3_08670 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D CK3_08660 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CK3_22290 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D CK3_22280 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D CK3_22270 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D CK3_24050 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D CK3_24060 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D CK3_24070 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CK3_12220 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D CK3_12230 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein D CK3_12240 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CK3_19700 ABC-type sugar transport systems, ATPase components K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CK3_00370 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D CK3_34600 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D CK3_34580 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D CK3_34570 Uncharacterized ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D CK3_00400 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D CK3_34590 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CK3_00380 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CK3_08530 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D CK3_03120 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D CK3_03110 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10440 rbsC; ribose transport system permease protein D CK3_08550 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein D CK3_03080 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CK3_03100 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CK3_08540 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CK3_23770 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein D CK3_23780 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein D CK3_23800 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein D CK3_23790 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D CK3_13830 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein D CK3_13840 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein D CK3_13850 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein D CK3_13860 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CK3_22210 ABC-type phosphate/phosphonate transport system, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D CK3_22190 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CK3_22200 ABC-type phosphate/phosphonate transport system, ATPase component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CK3_10470 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D CK3_23170 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D CK3_23180 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein D CK3_10480 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein D CK3_22640 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein D CK3_22610 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein D CK3_22600 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein D CK3_22590 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein D CK3_18700 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CK3_31860 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CK3_18710 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CK3_31870 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CK3_16630 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CK3_16620 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein D CK3_16610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein D CK3_16600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein D CK3_16590 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CK3_07570 nickel ABC transporter, periplasmic nickel-binding protein K15584 nikA; nickel transport system substrate-binding protein D CK3_07580 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15585 nikB; nickel transport system permease protein D CK3_07590 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15586 nikC; nickel transport system permease protein D CK3_07600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D CK3_07610 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D CK3_21120 ABC-type dipeptide transport system, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein D CK3_21110 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13890 gsiC; glutathione transport system permease protein D CK3_21100 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13891 gsiD; glutathione transport system permease protein D CK3_15670 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D CK3_15650 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein D CK3_15660 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CK3_00350 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component D CK3_34310 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component D CK3_13160 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D CK3_13990 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D CK3_24670 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D CK3_13970 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CK3_13980 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CK3_24690 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CK3_20250 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CK3_19670 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CK3_19680 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CK3_28830 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein D CK3_28840 ABC-type multidrug transport system, ATPase component K16921 ytrB; acetoin utilization transport system ATP-binding protein D CK3_13190 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CK3_15930 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CK3_13200 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CK3_15940 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CK3_34350 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_34340 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_22420 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_29230 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_22410 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:bprs02060] D CK3_33210 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CK3_23070 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D CK3_31900 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D CK3_33220 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D CK3_24370 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr D CK3_33230 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 03070 Bacterial secretion system [PATH:bprs03070] D CK3_10360 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D CK3_10510 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CK3_19430 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CK3_10380 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CK3_06560 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CK3_19080 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CK3_27530 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CK3_25470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bprs02020] D CK3_01810 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CK3_01800 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CK3_13830 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein D CK3_13620 Signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D CK3_20370 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D CK3_11340 Flagellin and related hook-associated proteins K02406 fliC; flagellin D CK3_11350 Flagellin and related hook-associated proteins K02406 fliC; flagellin D CK3_11080 RNA polymerase sigma factor, sigma-70 family K02405 fliA; RNA polymerase sigma factor FliA D CK3_22900 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CK3_22910 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CK3_09110 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_25130 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_25100 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_33660 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_25090 Tripartite tricarboxylate transporter TctB family. K07794 tctB; putative tricarboxylic transport membrane protein D CK3_25120 Tripartite tricarboxylate transporter TctB family. K07794 tctB; putative tricarboxylic transport membrane protein D CK3_25110 Uncharacterized protein conserved in bacteria K07795 tctC; putative tricarboxylic transport membrane protein D CK3_06500 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CK3_21180 Uncharacterized conserved protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D CK3_04180 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CK3_33360 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D CK3_34680 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CK3_12430 [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D CK3_12470 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D CK3_28370 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D CK3_12480 Citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CK3_12490 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CK3_28340 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CK3_28390 holo-ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61] D CK3_12420 holo-ACP synthase CitX K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52] D CK3_33120 Response regulator of citrate/malate metabolism K11692 K11692; two-component system, CitB family, response regulator DctR D CK3_20600 Response regulator of citrate/malate metabolism K11692 K11692; two-component system, CitB family, response regulator DctR D CK3_21660 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CK3_06200 Na+/citrate symporter K11616 maeN; malate:Na+ symporter D CK3_30950 Accessory gene regulator B. K07813 agrB; accessory gene regulator B D CK3_11220 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator D CK3_08130 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CK3_00690 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_27410 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_14030 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 atoC; two-component system, NtrC family, response regulator AtoC D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_16260 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CK3_12410 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D CK3_11390 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CK3_11430 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CK3_11400 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D CK3_11410 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CK3_10990 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CK3_11380 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CK3_11130 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CK3_01970 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CK3_18990 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D CK3_19000 Response regulator of citrate/malate metabolism K07719 glnL; two-component system, response regulator GlnL D CK3_19240 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_18260 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CK3_03070 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CK3_23750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Cache domain./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CK3_23740 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN D CK3_03060 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D CK3_24020 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D CK3_04620 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CK3_22050 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain. K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bprs02024] D CK3_00510 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CK3_16350 Zn-dependent hydrolases, including glyoxylases K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32] D CK3_00170 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CK3_22910 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CK3_07480 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CK3_07460 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CK3_07450 ABC-type spermidine/putrescine transport system, permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CK3_07470 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CK3_22640 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein D CK3_22610 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein D CK3_22600 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein D CK3_22590 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein D CK3_11950 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CK3_18750 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CK3_30950 Accessory gene regulator B. K07813 agrB; accessory gene regulator B D CK3_16630 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CK3_16620 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein D CK3_16610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein D CK3_16600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein D CK3_16590 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CK3_35160 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_20810 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_29070 Bacterial extracellular solute-binding proteins, family 5 Middle. K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_29090 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_08520 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_08510 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_20820 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_29030 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_21600 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_08500 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_35170 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_20830 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_29020 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_21610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_35150 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_20840 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_21620 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_08490 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_21090 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_21080 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein D CK3_29000 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein D CK3_08480 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein D CK3_06560 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CK3_10360 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D CK3_10510 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CK3_19430 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CK3_10380 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CK3_19080 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CK3_27530 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CK3_25470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CK3_34680 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:bprs02030] D CK3_11430 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CK3_08530 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D CK3_03120 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D CK3_23770 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein D CK3_23780 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein D CK3_11410 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CK3_11400 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D CK3_10990 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CK3_11110 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D CK3_11380 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CK3_11130 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CK3_11120 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CK3_11390 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CK3_10880 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CK3_10980 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D CK3_11010 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CK3_10970 Flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:bprs02040] D CK3_10840 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CK3_10860 Flagellar biosynthesis/type III secretory pathway lipoprotein K02409 fliF; flagellar M-ring protein FliF D CK3_10880 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CK3_10900 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CK3_10910 Flagellar FliJ protein. K02413 fliJ; flagellar protein FliJ D CK3_10980 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D CK3_11010 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CK3_11030 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CK3_11040 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CK3_11050 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CK3_11070 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CK3_11060 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CK3_10830 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CK3_11000 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CK3_10930 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D CK3_10940 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE D CK3_11090 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF D CK3_11100 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG D CK3_11260 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CK3_11250 Flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL D CK3_11340 Flagellin and related hook-associated proteins K02406 fliC; flagellin D CK3_11350 Flagellin and related hook-associated proteins K02406 fliC; flagellin D CK3_11170 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D CK3_11180 Flagellin-specific chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D CK3_10970 Flagellar motor protein K02557 motB; chemotaxis protein MotB D CK3_23240 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D CK3_24410 Sigma-70 region 3. K03086 rpoD; RNA polymerase primary sigma factor D CK3_16260 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CK3_11080 RNA polymerase sigma factor, sigma-70 family K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CK3_03250 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CK3_22670 B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bprs01501] D CK3_16630 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CK3_16620 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein D CK3_16610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein D CK3_16600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein D CK3_16590 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CK3_15450 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D CK3_15460 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CK3_30710 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:bprs01502] D CK3_04180 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CK3_33360 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D CK3_11810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CK3_17890 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CK3_31760 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CK3_28720 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CK3_08270 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bprs01503] D CK3_09410 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_15500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_32800 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_20370 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D CK3_21180 Uncharacterized conserved protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bprs01000] C 01001 Protein kinases [BR:bprs01001] D CK3_28640 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CK3_35080 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CK3_24780 HipA-like N-terminal domain. K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CK3_01810 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CK3_13620 Signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D CK3_22900 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CK3_04180 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CK3_11890 Putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CK3_11410 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CK3_18990 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D CK3_03070 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CK3_23750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Cache domain./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CK3_22050 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain. K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bprs01009] D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_16490 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D CK3_28650 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:bprs01002] D CK3_20320 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CK3_27690 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CK3_08190 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CK3_30620 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CK3_33910 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D CK3_34780 pyroglutamyl-peptidase I . Cysteine peptidase. MEROPS family C15 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CK3_03460 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CK3_10690 Predicted glutamine amidotransferases K07010 K07010; putative glutamine amidotransferase D CK3_19170 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_13040 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_09820 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_20090 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_27730 Cell wall-associated hydrolases (invasion-associated proteins) K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CK3_24320 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CK3_01210 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CK3_27720 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CK3_31370 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D CK3_08870 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D CK3_32990 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70] D CK3_09730 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70] D CK3_05330 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71] D CK3_30950 Accessory gene regulator B. K07813 agrB; accessory gene regulator B D CK3_16480 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein D CK3_16200 oligopeptidase F. Metallo peptidase. MEROPS family M03B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CK3_30440 D-alanyl-D-alanine carboxypeptidase. K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D CK3_12110 D-alanyl-D-alanine carboxypeptidase. K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D CK3_33450 Predicted Zn-dependent peptidases, insulinase-like K06972 PITRM1; presequence protease [EC:3.4.24.-] D CK3_08860 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CK3_07920 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D CK3_07950 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D CK3_35190 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D CK3_17560 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CK3_05260 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D CK3_09960 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CK3_26870 peptidase T. Metallo peptidase. MEROPS family M20B K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CK3_10080 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CK3_08940 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CK3_06180 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CK3_09610 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A D CK3_05110 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D CK3_19820 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D CK3_19830 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D CK3_13590 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D CK3_23200 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D CK3_31810 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D CK3_33240 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D CK3_19410 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CK3_34770 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CK3_29420 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CK3_26930 Predicted aminopeptidases K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10] D CK3_19810 Predicted aminopeptidases K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10] D CK3_16040 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-] D CK3_21860 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D CK3_03450 isoaspartyl dipeptidase. Metallo peptidase. MEROPS family M38 K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D CK3_13390 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CK3_17290 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CK3_11580 Cellulase M and related proteins K01269 yhfE; aminopeptidase [EC:3.4.11.-] D CK3_15450 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D CK3_20370 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D CK3_21490 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04772 degQ; serine protease DegQ [EC:3.4.21.-] D CK3_29530 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-] D CK3_07700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_16900 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_15600 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_22980 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_25430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_22700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_31350 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CK3_31330 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CK3_27290 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CK3_04030 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D CK3_32470 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89] D CK3_25530 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89] D CK3_18410 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D CK3_20610 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CK3_24170 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CK3_33480 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CK3_26860 protease FtsH subunit HflC K04087 hflC; modulator of FtsH protease HflC D CK3_26850 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:bprs01003] D CK3_34670 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D CK3_30710 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bprs01005] D CK3_01120 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CK3_10570 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CK3_10670 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D CK3_13780 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bprs01011] D CK3_12060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CK3_04520 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CK3_08760 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CK3_34090 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CK3_28730 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CK3_11810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CK3_17890 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CK3_31760 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CK3_17170 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CK3_08270 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CK3_20380 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CK3_30710 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CK3_34110 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CK3_34130 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CK3_07700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_16900 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_15600 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_22980 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_25430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_22700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CK3_19170 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_13040 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_09820 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_20090 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CK3_33240 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D CK3_30440 D-alanyl-D-alanine carboxypeptidase. K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D CK3_12110 D-alanyl-D-alanine carboxypeptidase. K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D CK3_27730 Cell wall-associated hydrolases (invasion-associated proteins) K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CK3_32990 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70] D CK3_09730 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70] D CK3_05330 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71] D CK3_18070 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D CK3_09410 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_15500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_32800 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:bprs01004] D CK3_20720 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CK3_20690 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CK3_20740 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CK3_07290 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_19210 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20730 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CK3_20760 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CK3_20710 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D CK3_27490 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CK3_24960 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CK3_16540 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bprs01006] D CK3_18470 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CK3_24560 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CK3_25310 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:bprs01007] D CK3_34230 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CK3_31450 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CK3_10130 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CK3_29310 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CK3_22680 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CK3_21230 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CK3_18090 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CK3_31220 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CK3_29100 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CK3_04150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CK3_09600 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CK3_27450 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CK3_04140 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CK3_33410 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CK3_28580 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CK3_34320 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CK3_27630 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CK3_28910 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CK3_25040 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CK3_30650 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CK3_30640 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CK3_23090 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CK3_27440 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CK3_17870 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D CK3_11460 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CK3_19310 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CK3_17900 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CK3_23500 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CK3_16830 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CK3_18320 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CK3_17380 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bprs00194] D CK3_10070 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CK3_10060 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CK3_10050 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CK3_10040 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CK3_10030 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CK3_10010 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CK3_10000 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CK3_09980 Putative F0F1-ATPase subunit (ATPase_gene1). K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bprs03000] D CK3_02200 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_35420 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_21960 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_06190 Transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CK3_07820 Transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CK3_15810 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D CK3_05290 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D CK3_32540 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CK3_35110 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D CK3_30760 Transcriptional regulators K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CK3_32690 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CK3_01930 Transcriptional regulators K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CK3_28850 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator D CK3_04440 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CK3_24500 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CK3_33520 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CK3_00600 Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D CK3_13330 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D CK3_06260 Transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D CK3_07230 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CK3_14440 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CK3_32720 cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D CK3_15570 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CK3_18210 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CK3_08090 Predicted transcriptional regulators K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CK3_04460 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D CK3_13210 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CK3_15460 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CK3_31980 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CK3_19690 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator D CK3_12340 N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein D CK3_31790 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D CK3_23570 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D CK3_15370 hypothetical protein K07726 K07726; putative transcriptional regulator D CK3_01420 hypothetical protein K07727 K07727; putative transcriptional regulator D CK3_06890 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator D CK3_16180 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator D CK3_12860 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator D CK3_01440 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator D CK3_07040 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator D CK3_24840 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CK3_01460 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D CK3_07120 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_22000 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_12550 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_22260 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CK3_34280 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CK3_34160 mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:bprs03021] D CK3_24380 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CK3_13410 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CK3_13420 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CK3_28300 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CK3_23240 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D CK3_24410 Sigma-70 region 3. K03086 rpoD; RNA polymerase primary sigma factor D CK3_19970 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CK3_08260 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CK3_17140 RNA polymerase, sigma subunit, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CK3_05250 RNA polymerase, sigma subunit, RpsG/SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CK3_31160 RNA polymerase, sigma subunit, RpoX/SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CK3_34010 RNA polymerase, sigma 29 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CK3_16260 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CK3_11080 RNA polymerase sigma factor, sigma-70 family K02405 fliA; RNA polymerase sigma factor FliA D CK3_17060 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CK3_18500 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CK3_10520 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D CK3_06210 Transcription elongation factor K03624 greA; transcription elongation factor GreA D CK3_32930 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CK3_13310 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bprs03019] D CK3_27000 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D CK3_27510 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CK3_30580 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CK3_21500 uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D CK3_12210 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CK3_03250 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CK3_16960 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CK3_13310 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CK3_04470 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CK3_33800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CK3_31400 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CK3_16500 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CK3_11220 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:bprs03011] D CK3_13650 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CK3_23580 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D CK3_19570 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CK3_19360 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CK3_19460 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CK3_09120 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D CK3_19490 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CK3_14110 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D CK3_19640 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CK3_19370 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CK3_13500 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CK3_19380 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CK3_19500 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CK3_16970 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D CK3_25480 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D CK3_09140 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D CK3_19590 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D CK3_25050 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D CK3_10540 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1 D CK3_19600 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CK3_19630 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3 D CK3_19620 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D CK3_19480 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D CK3_09220 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D CK3_10550 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CK3_10530 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CK3_10560 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D CK3_14100 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CK3_19530 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CK3_19440 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CK3_19560 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CK3_19340 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D CK3_19470 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CK3_25520 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19 D CK3_29710 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CK3_27010 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D CK3_19580 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D CK3_19610 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CK3_19520 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CK3_27030 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CK3_28210 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D CK3_19450 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D CK3_03310 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D CK3_27380 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CK3_06530 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D CK3_29720 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D CK3_17180 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:bprs03009] D CK3_27510 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CK3_33440 GTP-binding protein Era K03595 era; GTPase D CK3_27040 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D CK3_17060 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CK3_18500 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CK3_10520 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D CK3_26780 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CK3_21260 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CK3_26740 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CK3_06600 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CK3_24460 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CK3_34150 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CK3_20540 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CK3_18450 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CK3_29290 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CK3_18640 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CK3_06030 Predicted SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CK3_28660 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CK3_15480 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CK3_21520 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CK3_26830 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CK3_16880 Pseudouridylate synthases, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CK3_22970 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CK3_20220 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CK3_25500 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D CK3_28290 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CK3_33610 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CK3_27000 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D CK3_33540 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CK3_29300 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D CK3_12210 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CK3_24950 ribosome-associated GTPase EngA K03977 engA; GTPase D CK3_25540 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D CK3_16450 GTP-binding protein HflX K03665 hflX; GTPase D CK3_09470 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CK3_04110 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CK3_17020 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CK3_17070 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP D CK3_06480 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein D CK3_25170 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor D CK3_27050 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein D CK3_19100 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor D CK3_34190 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D CK3_27370 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:bprs03016] D CK3_20200 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CK3_09790 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CK3_34230 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CK3_34320 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CK3_18090 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CK3_29100 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CK3_21230 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CK3_31450 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CK3_22680 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CK3_04150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CK3_28910 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CK3_25040 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CK3_09600 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CK3_33410 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CK3_27630 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CK3_28580 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CK3_29310 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CK3_31220 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CK3_04140 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CK3_30650 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CK3_30640 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CK3_10130 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CK3_13670 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CK3_08250 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CK3_07840 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CK3_22860 conserved hypothetical protein TIGR00104 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D CK3_19750 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CK3_14000 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CK3_17000 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CK3_15530 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_33590 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_09470 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CK3_25310 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CK3_06580 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CK3_06590 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CK3_06550 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CK3_36040 Bacterial RNase P class A K01978 rnpB; M1 RNA D CK3_27450 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CK3_31660 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CK3_15490 Uncharacterized conserved protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D CK3_21700 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CK3_04360 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CK3_25270 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CK3_33560 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D CK3_25510 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CK3_23250 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D CK3_09560 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CK3_33050 tRNA and rRNA cytosine-C5-methylases K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D CK3_32030 rRNA methylases K03437 spoU; RNA methyltransferase, TrmH family D CK3_15510 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CK3_27800 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CK3_01600 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CK3_16740 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CK3_31930 Uncharacterized protein conserved in bacteria K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D CK3_10370 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CK3_33580 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CK3_01550 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CK3_19280 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CK3_20190 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CK3_19290 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CK3_15980 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CK3_30580 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CK3_16960 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bprs03012] D CK3_29730 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D CK3_31830 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CK3_23590 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D CK3_13530 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D CK3_24910 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D CK3_03340 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D CK3_24550 ribosome recycling factor K02838 frr; ribosome recycling factor D CK3_03330 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CK3_02980 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CK3_19390 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CK3_34260 translation elongation factor P (EF-P) K02356 efp; elongation factor P C 03110 Chaperones and folding catalysts [BR:bprs03110] D CK3_34790 ATPases with chaperone activity, ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CK3_29610 ATPases with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CK3_31340 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CK3_16490 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D CK3_33800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CK3_31400 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CK3_18340 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ D CK3_33790 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CK3_24110 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33 D CK3_34800 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D CK3_35260 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D CK3_31410 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D CK3_20370 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107] D CK3_13390 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CK3_17290 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CK3_10000 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CK3_29530 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-] D CK3_10770 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CK3_33390 PPIC-type PPIASE domain. K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D CK3_07860 thioredoxin K03671 TXN; thioredoxin D CK3_07270 thioredoxin K03671 TXN; thioredoxin D CK3_14480 Thioredoxin domain-containing protein K03671 TXN; thioredoxin D CK3_14580 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:bprs04131] D CK3_33100 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CK3_03930 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CK3_01750 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_13550 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_16490 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:bprs03051] D CK3_16490 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:bprs03032] D CK3_25000 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CK3_02200 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_35420 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_21960 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_01490 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D CK3_06500 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CK3_09230 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CK3_12830 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC D CK3_08790 replicative DNA helicase loader DnaI K02315 dnaC; DNA replication protein DnaC D CK3_09130 single stranded DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D CK3_04480 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CK3_24620 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CK3_06490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CK3_33940 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CK3_20510 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CK3_09500 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CK3_21760 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CK3_25550 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CK3_27990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CK3_06450 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CK3_28110 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CK3_06460 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CK3_28120 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CK3_28060 Topoisomerase IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bprs03036] D CK3_02200 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_35420 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_21960 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_27510 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CK3_01490 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D CK3_06500 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CK3_04440 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CK3_27520 condensin subunit Smc K03529 smc; chromosome segregation protein D CK3_22730 Uncharacterized conserved protein K05896 scpA; segregation and condensation protein A D CK3_22740 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CK3_19680 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CK3_34140 Septum formation initiator. K03586 ftsL; cell division protein FtsL D CK3_34040 Cell division septal protein K03589 ftsQ; cell division protein FtsQ D CK3_19670 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CK3_09410 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_15500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_32800 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_25380 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CK3_25390 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CK3_25400 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CK3_27660 Uncharacterized protein conserved in bacteria K09772 sepF; cell division inhibitor SepF D CK3_10440 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CK3_25350 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CK3_25360 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CK3_25410 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA D CK3_07130 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D CK3_11150 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D CK3_07120 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_22000 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_12550 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_06590 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CK3_06600 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CK3_27810 Site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC D CK3_01910 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD D CK3_09340 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D CK3_31020 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D CK3_05030 Protein involved in cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CK3_21530 Protein involved in cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CK3_31320 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein D CK3_04500 conserved hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:bprs03400] D CK3_22320 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CK3_20390 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CK3_00180 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CK3_16270 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CK3_24380 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CK3_16470 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CK3_15140 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CK3_00480 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CK3_33300 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CK3_19770 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CK3_27990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CK3_03440 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D CK3_16820 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D CK3_34220 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CK3_13410 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CK3_13420 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CK3_28300 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CK3_02990 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CK3_21480 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D CK3_25290 DNA mismatch repair enzyme (predicted ATPase) K03572 mutL; DNA mismatch repair protein MutL D CK3_18490 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CK3_18480 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CK3_04480 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CK3_24620 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CK3_06490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CK3_33940 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CK3_20510 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CK3_09500 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CK3_21760 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CK3_09130 single stranded DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D CK3_21920 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D CK3_10450 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CK3_01850 protein RecA K03553 recA; recombination protein RecA D CK3_24150 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CK3_28710 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CK3_27320 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50 D CK3_27310 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D CK3_09590 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D CK3_06470 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CK3_03980 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CK3_28180 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CK3_19160 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CK3_33430 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CK3_21780 recombination protein RecR K06187 recR; recombination protein RecR D CK3_18420 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CK3_26840 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U D CK3_16380 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D CK3_16390 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D CK3_16400 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D CK3_06450 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CK3_28110 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CK3_06460 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CK3_28120 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CK3_01490 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D CK3_22090 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CK3_32890 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V D CK3_27290 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CK3_01860 Uncharacterized protein conserved in bacteria K03565 recX; regulatory protein D CK3_14560 Ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:bprs03029] D CK3_29730 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D CK3_23590 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D CK3_13530 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D CK3_24910 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D CK3_33440 GTP-binding protein Era K03595 era; GTPase D CK3_10130 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CK3_29100 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CK3_04150 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CK3_33410 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CK3_22680 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CK3_27470 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CK3_27480 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CK3_27460 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CK3_09130 single stranded DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D CK3_33800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CK3_31400 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CK3_31410 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES D CK3_18340 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ D CK3_33790 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CK3_15530 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_33590 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_06560 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase D CK3_16490 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bprs02000] D CK3_13190 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CK3_15930 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CK3_13200 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CK3_15940 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CK3_34350 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_34340 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_22420 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_29230 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_22410 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CK3_30810 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CK3_00490 ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein D CK3_08650 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D CK3_08670 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein D CK3_08660 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CK3_24050 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D CK3_24060 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D CK3_24070 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CK3_12220 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D CK3_12230 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein D CK3_12240 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CK3_07480 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CK3_07460 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CK3_07450 ABC-type spermidine/putrescine transport system, permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CK3_07470 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CK3_22290 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D CK3_22280 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D CK3_22270 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D CK3_00460 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CK3_01670 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CK3_15590 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CK3_00440 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CK3_00470 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CK3_01660 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CK3_15770 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CK3_00430 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CK3_01650 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CK3_19700 ABC-type sugar transport systems, ATPase components K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CK3_23770 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein D CK3_23780 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein D CK3_23800 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein D CK3_23790 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D CK3_08530 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D CK3_03120 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D CK3_03110 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10440 rbsC; ribose transport system permease protein D CK3_08550 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein D CK3_03080 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CK3_03100 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CK3_08540 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CK3_00370 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D CK3_34600 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins D CK3_34580 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein D CK3_34570 Uncharacterized ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein D CK3_00400 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D CK3_34590 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CK3_00380 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CK3_13830 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein D CK3_13840 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein D CK3_13850 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein D CK3_13860 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CK3_22210 ABC-type phosphate/phosphonate transport system, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D CK3_22190 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CK3_22200 ABC-type phosphate/phosphonate transport system, ATPase component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CK3_10470 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D CK3_23170 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D CK3_23180 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein D CK3_10480 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein D CK3_22640 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein D CK3_22610 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein D CK3_22600 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein D CK3_22590 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein D CK3_18700 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CK3_31860 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein D CK3_18710 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CK3_31870 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D CK3_13370 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D CK3_31700 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D CK3_13360 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D CK3_13350 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D CK3_08880 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CK3_16420 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CK3_08900 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein D CK3_08910 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CK3_16630 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein D CK3_16620 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15581 oppB; oligopeptide transport system permease protein D CK3_16610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein D CK3_16600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein D CK3_16590 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein D CK3_07570 nickel ABC transporter, periplasmic nickel-binding protein K15584 nikA; nickel transport system substrate-binding protein D CK3_07580 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15585 nikB; nickel transport system permease protein D CK3_07590 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15586 nikC; nickel transport system permease protein D CK3_07600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D CK3_07610 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D CK3_21120 ABC-type dipeptide transport system, periplasmic component K13889 gsiB; glutathione transport system substrate-binding protein D CK3_21110 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13890 gsiC; glutathione transport system permease protein D CK3_21100 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K13891 gsiD; glutathione transport system permease protein D CK3_35160 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_20810 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_29070 Bacterial extracellular solute-binding proteins, family 5 Middle. K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_29090 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_08520 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CK3_08510 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_20820 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_29030 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_21600 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D CK3_08500 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_35170 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_20830 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_29020 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_21610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CK3_35150 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_20840 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_21620 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_08490 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_21090 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein D CK3_21080 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein D CK3_29000 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein D CK3_08480 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein D CK3_12370 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CK3_12360 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein D CK3_12350 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CK3_27600 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein D CK3_27610 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein D CK3_27620 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D CK3_15670 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D CK3_15650 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein D CK3_15660 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CK3_00350 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component D CK3_34310 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component D CK3_24660 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D CK3_13150 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component D CK3_13160 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D CK3_13990 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D CK3_24670 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D CK3_13970 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CK3_13980 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CK3_24690 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CK3_20250 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CK3_28830 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein D CK3_28840 ABC-type multidrug transport system, ATPase component K16921 ytrB; acetoin utilization transport system ATP-binding protein D CK3_19670 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CK3_19680 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CK3_33320 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CK3_13940 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D CK3_15700 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D CK3_15710 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D CK3_13930 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CK3_15720 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CK3_15730 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CK3_11730 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D CK3_03190 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CK3_22070 Na+-driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump D CK3_13340 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump D CK3_33890 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_07930 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_03350 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_34610 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_21390 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_21300 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_09840 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_12000 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CK3_29260 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_04080 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_34860 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CK3_33040 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_16310 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_05340 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_15830 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_21280 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CK3_14090 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_00330 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_22540 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_35200 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_01640 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_31850 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump D CK3_23860 Fucose permease K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter D CK3_33210 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CK3_23070 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D CK3_31900 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D CK3_33220 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr D CK3_24370 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr D CK3_33230 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CK3_08000 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator D CK3_04050 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D CK3_03240 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter D CK3_10970 Flagellar motor protein K02557 motB; chemotaxis protein MotB D CK3_31740 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D CK3_10270 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D CK3_16220 Putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein D CK3_06070 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D CK3_18750 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CK3_20450 SSS sodium solute transporter superfamily K11928 putP; sodium/proline symporter D CK3_00560 Na+/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CK3_19010 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family D CK3_20360 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family D CK3_33130 Na+/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CK3_33150 Na+/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CK3_18810 transporter, NhaC family (TC 2.A.35) K03315 nhaC; Na+:H+ antiporter, NhaC family D CK3_17880 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D CK3_23680 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D CK3_06060 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein D CK3_07650 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein D CK3_07640 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D CK3_06040 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D CK3_06050 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D CK3_10090 uracil-xanthine permease K02824 uraA; uracil permease D CK3_24360 Permeases K06901 pbuG; adenine/guanine/hypoxanthine permease D CK3_28130 Chromate transport protein ChrA K07240 chrA; chromate transporter D CK3_28140 Chromate transport protein ChrA K07240 chrA; chromate transporter D CK3_21680 Chromate transport protein ChrA K07240 chrA; chromate transporter D CK3_21690 Chromate transport protein ChrA K07240 chrA; chromate transporter D CK3_22880 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family D CK3_19230 Mn2+ and Fe2+ transporters of the NRAMP family K03322 mntH; manganese transport protein D CK3_01970 TRAP transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CK3_01960 TRAP-type C4-dicarboxylate transport system, small permease component K21394 yiaM; TRAP-type transport system small permease protein D CK3_01950 tripartite ATP-independent periplasmic transporter solute receptor, DctP family K21395 yiaO; TRAP-type transport system periplasmic protein D CK3_04270 tripartite ATP-independent periplasmic transporter solute receptor, DctP family K21395 yiaO; TRAP-type transport system periplasmic protein D CK3_01790 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter D CK3_32700 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter D CK3_15540 Membrane protein involved in the export of O-antigen and teichoic acid K06409 spoVB; stage V sporulation protein B D CK3_25190 Membrane protein involved in the export of O-antigen and teichoic acid K06409 spoVB; stage V sporulation protein B D CK3_20660 Predicted permeases K24180 mleP; malate permease and related proteins D CK3_22470 Predicted permeases K24180 mleP; malate permease and related proteins D CK3_32070 Predicted permeases K24180 mleP; malate permease and related proteins D CK3_11830 Predicted permeases K24180 mleP; malate permease and related proteins D CK3_29780 Predicted permeases K24180 mleP; malate permease and related proteins D CK3_19870 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D CK3_05380 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump D CK3_05370 Branched-chain amino acid transport protein (AzlD). K26606 azlD; branched chain amino acid efflux pump D CK3_19860 Predicted branched-chain amino acid permeases (azaleucine resistance) K26606 azlD; branched chain amino acid efflux pump D CK3_09110 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_25130 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_25100 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_33660 Uncharacterized protein conserved in bacteria K07793 tctA; putative tricarboxylic transport membrane protein D CK3_25090 Tripartite tricarboxylate transporter TctB family. K07794 tctB; putative tricarboxylic transport membrane protein D CK3_25120 Tripartite tricarboxylate transporter TctB family. K07794 tctB; putative tricarboxylic transport membrane protein D CK3_25110 Uncharacterized protein conserved in bacteria K07795 tctC; putative tricarboxylic transport membrane protein D CK3_09450 Predicted membrane protein K23675 fmnP; riboflavin transporter D CK3_09830 Protein of unknown function (DUF1393). K23675 fmnP; riboflavin transporter D CK3_01620 Predicted membrane protein K23242 mntP; manganese efflux pump family protein D CK3_10290 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_31500 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CK3_31490 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D CK3_31530 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D CK3_23900 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CK3_31510 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CK3_23890 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CK3_31520 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CK3_23950 glutaconyl-CoA decarboxylase alpha subunit K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5] D CK3_06090 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D CK3_06100 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D CK3_06080 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D CK3_16790 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:bprs02044] D CK3_08190 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CK3_30620 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CK3_12410 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D CK3_20900 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D CK3_20860 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D CK3_08130 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CK3_18670 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA D CK3_09480 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CK3_11070 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CK3_11060 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CK3_11300 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein D CK3_10860 Flagellar biosynthesis/type III secretory pathway lipoprotein K02409 fliF; flagellar M-ring protein FliF D CK3_10900 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CK3_11010 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CK3_11030 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CK3_11040 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CK3_11050 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CK3_19080 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CK3_10360 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D CK3_10510 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D CK3_19430 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D CK3_25470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CK3_27530 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CK3_10380 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D CK3_06560 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:bprs02042] D CK3_31740 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D CK3_10270 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D CK3_16890 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:bprs02022] D CK3_01810 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CK3_01800 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CK3_13620 Signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D CK3_22900 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CK3_22910 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CK3_04180 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CK3_33360 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D CK3_10160 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D CK3_14330 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D CK3_34680 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CK3_33120 Response regulator of citrate/malate metabolism K11692 K11692; two-component system, CitB family, response regulator DctR D CK3_20600 Response regulator of citrate/malate metabolism K11692 K11692; two-component system, CitB family, response regulator DctR D CK3_11890 Putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CK3_18350 Response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator D CK3_14030 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 atoC; two-component system, NtrC family, response regulator AtoC D CK3_11410 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CK3_10990 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CK3_11380 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CK3_11130 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CK3_18990 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D CK3_19000 Response regulator of citrate/malate metabolism K07719 glnL; two-component system, response regulator GlnL D CK3_03070 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CK3_23750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Cache domain./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D CK3_23740 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN D CK3_03060 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D CK3_24020 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN D CK3_22050 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain. K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D CK3_27420 CTP synthase K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:bprs02035] D CK3_11410 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CK3_11400 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D CK3_11110 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D CK3_11120 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CK3_11390 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CK3_11380 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CK3_10990 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CK3_11130 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CK3_11430 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CK3_10900 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CK3_10910 Flagellar FliJ protein. K02413 fliJ; flagellar protein FliJ D CK3_11030 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CK3_11040 Flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CK3_11050 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CK3_11070 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CK3_11060 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CK3_10880 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CK3_10980 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D CK3_11010 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CK3_10860 Flagellar biosynthesis/type III secretory pathway lipoprotein K02409 fliF; flagellar M-ring protein FliF D CK3_10840 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CK3_10830 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CK3_11000 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CK3_10930 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D CK3_11090 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF D CK3_11100 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG D CK3_10940 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE D CK3_11260 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CK3_11250 Flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL D CK3_22360 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CK3_11340 Flagellin and related hook-associated proteins K02406 fliC; flagellin D CK3_11350 Flagellin and related hook-associated proteins K02406 fliC; flagellin D CK3_11170 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D CK3_11180 Flagellin-specific chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D CK3_11080 RNA polymerase sigma factor, sigma-70 family K02405 fliA; RNA polymerase sigma factor FliA D CK3_10970 Flagellar motor protein K02557 motB; chemotaxis protein MotB D CK3_11230 Uncharacterized protein conserved in bacteria K13626 fliW; flagellar assembly factor FliW D CK3_10950 Uncharacterized protein, possibly involved in motility K02385 flbD; flagellar protein FlbD D CK3_12410 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA D CK3_20900 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D CK3_20860 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D CK3_08190 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CK3_30620 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CK3_08130 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bprs04812] D CK3_10440 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CK3_25380 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CK3_25390 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CK3_25400 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CK3_07130 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D CK3_11150 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein D CK3_07120 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_22000 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CK3_12550 Predicted transcriptional regulators K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bprs04147] D CK3_16490 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG D CK3_03250 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CK3_33100 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CK3_33090 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CK3_01750 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_13550 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CK3_08860 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CK3_31400 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CK3_33800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CK3_08330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CK3_32080 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CK3_13530 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D CK3_08250 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CK3_22510 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CK3_18910 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_17840 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CK3_15560 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CK3_34760 hypothetical protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CK3_18950 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CK3_18780 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CK3_32840 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CK3_04040 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CK3_08060 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CK3_07990 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CK3_00690 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_27410 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CK3_17860 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_17370 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_34440 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_33780 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CK3_28010 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CK3_18850 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CK3_30720 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CK3_33080 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CK3_03930 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bprs02048] D CK3_16170 type I restriction system adenine methylase (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CK3_32350 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CK3_02200 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_35420 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_21960 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CK3_03960 Restriction endonuclease K07448 mrr; restriction system protein D CK3_26660 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CK3_30080 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CK3_14610 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CK3_21190 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D CK3_19900 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D CK3_35080 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CK3_24780 HipA-like N-terminal domain. K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CK3_19910 Plasmid stabilisation system protein. K19092 parE1_3_4; toxin ParE1/3/4 D CK3_00150 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D CK3_00160 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D CK3_10440 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CK3_34230 glutamyl-tRNA synthetase, bacterial family K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CK3_15530 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CK3_33590 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:bprs04090] C 01504 Antimicrobial resistance genes [BR:bprs01504] D CK3_17080 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein D CK3_12020 Chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D CK3_15450 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1 D CK3_15460 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CK3_04180 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CK3_33360 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR D CK3_21180 Uncharacterized conserved protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bprs00537] D CK3_08860 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bprs03100] D CK3_T_35790 CK3_T_35790 K14218 tRNA-Ala; tRNA Ala D CK3_T_36000 CK3_T_36000 K14219 tRNA-Arg; tRNA Arg D CK3_T_35540 CK3_T_35540 K14219 tRNA-Arg; tRNA Arg D CK3_T_35980 CK3_T_35980 K14219 tRNA-Arg; tRNA Arg D CK3_T_35950 CK3_T_35950 K14219 tRNA-Arg; tRNA Arg D CK3_T_35880 CK3_T_35880 K14220 tRNA-Asn; tRNA Asn D CK3_T_35730 CK3_T_35730 K14220 tRNA-Asn; tRNA Asn D CK3_T_35580 CK3_T_35580 K14221 tRNA-Asp; tRNA Asp D CK3_T_35920 CK3_T_35920 K14221 tRNA-Asp; tRNA Asp D CK3_T_35690 CK3_T_35690 K14223 tRNA-Gln; tRNA Gln D CK3_T_35990 CK3_T_35990 K14223 tRNA-Gln; tRNA Gln D CK3_T_35970 CK3_T_35970 K14223 tRNA-Gln; tRNA Gln D CK3_T_35960 CK3_T_35960 K14223 tRNA-Gln; tRNA Gln D CK3_T_35890 CK3_T_35890 K14224 tRNA-Glu; tRNA Glu D CK3_T_35570 CK3_T_35570 K14224 tRNA-Glu; tRNA Glu D CK3_T_35670 CK3_T_35670 K14224 tRNA-Glu; tRNA Glu D CK3_T_35490 CK3_T_35490 K14225 tRNA-Gly; tRNA Gly D CK3_T_35530 CK3_T_35530 K14225 tRNA-Gly; tRNA Gly D CK3_T_35650 CK3_T_35650 K14225 tRNA-Gly; tRNA Gly D CK3_T_36020 CK3_T_36020 K14225 tRNA-Gly; tRNA Gly D CK3_T_35550 CK3_T_35550 K14226 tRNA-His; tRNA His D CK3_T_35850 CK3_T_35850 K14228 tRNA-Leu; tRNA Leu D CK3_T_35500 CK3_T_35500 K14228 tRNA-Leu; tRNA Leu D CK3_T_35940 CK3_T_35940 K14228 tRNA-Leu; tRNA Leu D CK3_T_35780 CK3_T_35780 K14228 tRNA-Leu; tRNA Leu D CK3_T_35510 CK3_T_35510 K14229 tRNA-Lys; tRNA Lys D CK3_T_35640 CK3_T_35640 K14229 tRNA-Lys; tRNA Lys D CK3_T_35750 CK3_T_35750 K14229 tRNA-Lys; tRNA Lys D CK3_T_35910 CK3_T_35910 K14230 tRNA-Met; tRNA Met D CK3_T_35620 CK3_T_35620 K14230 tRNA-Met; tRNA Met D CK3_T_35720 CK3_T_35720 K14230 tRNA-Met; tRNA Met D CK3_T_35760 CK3_T_35760 K14230 tRNA-Met; tRNA Met D CK3_T_35840 CK3_T_35840 K14230 tRNA-Met; tRNA Met D CK3_T_35830 CK3_T_35830 K14230 tRNA-Met; tRNA Met D CK3_T_35480 CK3_T_35480 K14231 tRNA-Phe; tRNA Phe D CK3_T_35630 CK3_T_35630 K14231 tRNA-Phe; tRNA Phe D CK3_T_35520 CK3_T_35520 K14232 tRNA-Pro; tRNA Pro D CK3_T_35560 CK3_T_35560 K14232 tRNA-Pro; tRNA Pro D CK3_T_35660 CK3_T_35660 K14232 tRNA-Pro; tRNA Pro D CK3_T_35800 CK3_T_35800 K14232 tRNA-Pro; tRNA Pro D CK3_T_35860 CK3_T_35860 K14233 tRNA-Ser; tRNA Ser D CK3_T_35710 CK3_T_35710 K14233 tRNA-Ser; tRNA Ser D CK3_T_36010 CK3_T_36010 K14233 tRNA-Ser; tRNA Ser D CK3_T_35870 CK3_T_35870 K14233 tRNA-Ser; tRNA Ser D CK3_T_35900 CK3_T_35900 K14234 tRNA-Thr; tRNA Thr D CK3_T_35600 CK3_T_35600 K14234 tRNA-Thr; tRNA Thr D CK3_T_35680 CK3_T_35680 K14234 tRNA-Thr; tRNA Thr D CK3_T_35770 CK3_T_35770 K14234 tRNA-Thr; tRNA Thr D CK3_T_35810 CK3_T_35810 K14235 tRNA-Trp; tRNA Trp D CK3_T_35470 CK3_T_35470 K14236 tRNA-Tyr; tRNA Tyr D CK3_T_35700 CK3_T_35700 K14236 tRNA-Tyr; tRNA Tyr D CK3_T_35610 CK3_T_35610 K14236 tRNA-Tyr; tRNA Tyr D CK3_T_35930 CK3_T_35930 K14237 tRNA-Val; tRNA Val D CK3_T_35590 CK3_T_35590 K14237 tRNA-Val; tRNA Val D CK3_T_35820 CK3_T_35820 K14237 tRNA-Val; tRNA Val D CK3_36040 Bacterial RNase P class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CK3_23880 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D CK3_09040 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CK3_11930 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D CK3_12390 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D CK3_17620 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D CK3_17160 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CK3_14290 methionine-S-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D CK3_07350 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CK3_02010 hydrogenases, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D CK3_07380 desulfoferrodoxin ferrous iron-binding domain K05919 dfx; superoxide reductase [EC:1.15.1.2] D CK3_14460 Desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D CK3_16330 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CK3_02290 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CK3_21370 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CK3_22760 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CK3_01040 Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CK3_03030 pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CK3_17320 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CK3_32510 Trehalose and maltose hydrolases (possible phosphorylases) K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D CK3_00530 NCAIR mutase (PurE)-related proteins K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D CK3_34180 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CK3_22990 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CK3_35120 Sugar kinases, ribokinase family K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D CK3_28190 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CK3_32180 Polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D CK3_23050 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CK3_31170 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D CK3_04530 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D CK3_29620 Arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CK3_00200 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D CK3_28880 Predicted metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CK3_34270 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D CK3_09210 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D CK3_21250 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CK3_26260 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CK3_32710 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CK3_17970 N-acyl-D-aspartate/D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D CK3_07320 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CK3_28700 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CK3_09440 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CK3_13290 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CK3_12540 Predicted amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CK3_22920 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D CK3_19250 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family K18459 gpuA; guanidinopropionase [EC:3.5.3.17] D CK3_19710 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CK3_17610 carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127] D CK3_31580 Myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D CK3_31770 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CK3_23970 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167] D CK3_23980 2-hydroxyglutaryl-CoA dehydratase beta subunit K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167] D CK3_15990 diaminopropionate ammonia-lyase family K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D CK3_07910 ATP-utilizing enzymes of the PP-loop superfamily K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D CK3_00540 conserved hypothetical protein TIGR00299 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D CK3_23960 2-hydroxyglutaryl-CoA dehydratase activator protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D CK3_20560 Folylpolyglutamate synthase K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-] D CK3_20780 acetyl-CoA carboxylase carboxyltransferase subunit alpha K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D CK3_29210 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CK3_29220 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CK3_24830 copper-(or silver)-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CK3_19760 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D CK3_15150 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D CK3_04490 Phosphotransferase System HPr (HPr) Family K11184 chr; catabolite repression HPr-like protein D CK3_33570 PTS HPr component phosphorylation site. K11184 chr; catabolite repression HPr-like protein C 99982 Energy metabolism D CK3_29200 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CK3_29190 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CK3_29180 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CK3_11690 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D CK3_15520 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins D CK3_14170 hypothetical protein K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism D CK3_33990 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit D CK3_33070 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D CK3_06770 hypothetical protein K15051 endA; DNA-entry nuclease D CK3_32770 hypothetical protein K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism D CK3_27650 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CK3_31650 Cell Wall Hydrolase. K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D CK3_09930 Putative p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein D CK3_09950 Putative p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein D CK3_17960 Putative p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein D CK3_21830 Putative p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D CK3_00310 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D CK3_26320 Uncharacterized phage-encoded protein K07741 antB; anti-repressor protein D CK3_19320 Transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D CK3_24990 Predicted exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D CK3_29630 Uncharacterized protein with conserved CXXC pairs K19411 mcsA; protein arginine kinase activator D CK3_13700 trigger factor K03545 tig; trigger factor D CK3_31360 trigger factor K03545 tig; trigger factor D CK3_30570 SsrA-binding protein K03664 smpB; SsrA-binding protein D CK3_09530 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE D CK3_23530 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D CK3_12150 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor D CK3_09280 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D CK3_09760 Predicted methylated DNA-protein cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D CK3_25340 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC D CK3_32330 Predicted ATP-dependent endonuclease of the OLD family K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CK3_25560 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease D CK3_16910 Predicted endonuclease containing a URI domain K07461 K07461; putative endonuclease D CK3_23540 DNA protecting protein DprA K04096 smf; DNA processing protein D CK3_03630 Putative phage replication protein RstA K07467 nicK; putative DNA relaxase D CK3_23660 Putative phage replication protein RstA K07467 nicK; putative DNA relaxase D CK3_13300 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase D CK3_15400 phage/plasmid primase, P4 family, C-terminal domain K06919 K06919; putative DNA primase/helicase D CK3_30100 phage/plasmid primase, P4 family, C-terminal domain K06919 K06919; putative DNA primase/helicase D CK3_05970 hypothetical protein K07484 K07484; transposase D CK3_01060 IS66 Orf2 like protein. K07484 K07484; transposase D CK3_22790 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase D CK3_27880 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase D CK3_27890 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase D CK3_04800 Transposase and inactivated derivatives K07497 K07497; putative transposase D CK3_03680 Integrase core domain. K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CK3_07260 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E D CK3_07280 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E D CK3_21770 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CK3_26950 citrate transporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CK3_28330 H+/citrate symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CK3_19020 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CK3_06340 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CK3_09080 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CK3_17250 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CK3_01840 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CK3_10710 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CK3_15870 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CK3_29520 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D CK3_18040 hypothetical protein K06333 cotJB; spore coat protein JB D CK3_18030 Mn-containing catalase K06334 cotJC; spore coat protein JC D CK3_06570 Predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein D CK3_14070 biotin-dependent carboxylase uncharacterized domain K06350 kipA; antagonist of KipI D CK3_20970 Uncharacterized membrane protein K06374 spmB; spore maturation protein B D CK3_31180 anti-anti-sigma factor K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D CK3_33900 Stage II sporulation protein P (SpoIIP). K06385 spoIIP; stage II sporulation protein P D CK3_11800 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D CK3_18610 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D CK3_18600 Stage III sporulation protein AB (spore_III_AB). K06391 spoIIIAB; stage III sporulation protein AB D CK3_18590 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D CK3_18580 Stage III sporulation protein AC/AD protein family. K06393 spoIIIAD; stage III sporulation protein AD D CK3_18570 Stage III sporulation protein AE (spore_III_AE). K06394 spoIIIAE; stage III sporulation protein AE D CK3_18550 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG D CK3_18540 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D CK3_24980 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D CK3_15360 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_15880 Recombinase. K06400 spoIVCA; site-specific DNA recombinase D CK3_17470 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_12850 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_13240 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_32270 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_26730 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_19940 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_02050 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase D CK3_31140 Stage V sporulation protein AA. K06403 spoVAA; stage V sporulation protein AA D CK3_31130 hypothetical protein K06404 spoVAB; stage V sporulation protein AB D CK3_31120 SpoVA protein. K06405 spoVAC; stage V sporulation protein AC D CK3_31100 Stage V sporulation protein AD (SpoVAD). K06406 spoVAD; stage V sporulation protein AD D CK3_31090 SpoVA protein. K06407 spoVAE; stage V sporulation protein AE D CK3_32050 Bacillus/Clostridium GerA spore germination protein. K06408 spoVAF; stage V sporulation protein AF D CK3_20130 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G D CK3_09670 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G D CK3_33970 Sporulation and spore germination. K06298 gerM; germination protein M C 99993 Cell motility C 99995 Signaling proteins D CK3_21510 Carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein D CK3_23450 Carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein D CK3_30680 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D CK3_27960 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D CK3_25160 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D CK3_20570 hypothetical protein K22116 capC; gamma-polyglutamate biosynthesis protein CapC D CK3_13920 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D CK3_15740 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D CK3_13870 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D CK3_21140 Uncharacterized protein involved in copper resistance K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D CK3_13640 Histidinol phosphatase and related hydrolases of the PHP family K04477 ycdX; putative hydrolase D CK3_19150 EMAP domain K06878 K06878; tRNA-binding protein D CK3_25880 Uncharacterized conserved protein K03744 lemA; LemA protein D CK3_28820 Predicted membrane protein K08974 K08974; putative membrane protein D CK3_08820 AroM protein. K14591 aroM; protein AroM C 99997 Function unknown D CK3_33270 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein D CK3_15020 Acetyl xylan esterase (AXE1). K06889 K06889; uncharacterized protein D CK3_02800 Phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W D CK3_02710 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein D CK3_04350 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein D CK3_34690 Predicted ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein D CK3_07220 Predicted DNA-binding proteins K06933 K06933; uncharacterized protein D CK3_33060 Predicted DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein D CK3_34120 Predicted Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein D CK3_25490 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein D CK3_28680 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein D CK3_29490 Predicted exporters of the RND superfamily K07003 K07003; uncharacterized protein D CK3_19840 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D CK3_17210 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D CK3_17520 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein D CK3_24230 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein D CK3_20680 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein D CK3_10820 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein D CK3_00640 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D CK3_18390 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D CK3_32830 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D CK3_33170 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D CK3_18680 Predicted permeases K07090 K07090; uncharacterized protein D CK3_29110 Predicted permeases K07090 K07090; uncharacterized protein D CK3_09900 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D CK3_21560 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D CK3_07890 Predicted phosphohydrolases K07098 K07098; uncharacterized protein D CK3_26810 Short-chain dehydrogenases of various substrate specificities K07124 K07124; uncharacterized protein D CK3_14700 FOG: TPR repeat, SEL1 subfamily K07126 K07126; uncharacterized protein D CK3_08740 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D CK3_09170 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D CK3_23320 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D CK3_01920 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein D CK3_25220 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein D CK3_11860 Uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein D CK3_32850 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein D CK3_22450 Predicted membrane protein K07149 K07149; uncharacterized protein D CK3_08590 Uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein D CK3_17570 Uncharacterized conserved protein K09117 K09117; uncharacterized protein D CK3_27950 Uncharacterized conserved protein K09157 K09157; uncharacterized protein D CK3_12010 HD domain. K09163 K09163; uncharacterized protein D CK3_34660 Uncharacterized protein conserved in bacteria K09775 K09775; uncharacterized protein D CK3_25460 Uncharacterized protein conserved in bacteria K09787 K09787; uncharacterized protein D CK3_10760 Uncharacterized conserved protein K09807 K09807; uncharacterized protein D CK3_19720 Uncharacterized protein conserved in bacteria K00243 K00243; uncharacterized protein D CK3_07360 Uncharacterized protein conserved in bacteria K09861 K09861; uncharacterized protein D CK3_02940 Uncharacterized conserved protein (DUF2156). K01163 K01163; uncharacterized protein D CK3_02970 Uncharacterized conserved protein K01163 K01163; uncharacterized protein D CK3_09010 Uncharacterized conserved protein K01163 K01163; uncharacterized protein D CK3_24130 DNA polymerase family B, exonuclease domain. K07502 yprB; uncharacterized protein D CK3_27020 Predicted ribosomal protein K07584 ysxB; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024