+E Transcription factors KO #

  Transcription Factors - Bordetella petrii

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D Bpet1302 putative C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bpet1455 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bpet1042 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bpet1038 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bpet1306 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bpet1449 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D Bpet4641 transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D Bpet0019 AraC-family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D Bpet0937 possible AraC-family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D Bpet0109 Putative HTH-type transcriptional regulator K07506 K07506; AraC family transcriptional regulator D Bpet4985 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D Bpet0471 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet0780 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet0312 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet2198 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet3336 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet1279 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet3203 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet2728 transcriptional regulator, LysR-family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Bpet0256 pcaQ; transcriptional regulator of pca Genes, LysR-family K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D Bpet2058 metR; transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Bpet2291 transcriptional regulator, LysR-family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Bpet4734 transcriptional regulator, LysR-family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Bpet1776 transcriptional regulator, LysR-family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Bpet0774 transcriptional regulator, LysR-family K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC D Bpet4480 transcriptional regulator, LysR-family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D Bpet4776 transcriptional regulator, LysR-family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D Bpet4153 transcriptional regulator, LysR-family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D Bpet2911 transcriptional regulator, LysR-family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D Bpet2288 transcriptional regulator, LysR-family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D Bpet4507 transcriptional regulator, LysR-family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D Bpet3659 transcriptional regulator, LysR-family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D Bpet2257 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet3900 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet4163 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet0727 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet2432 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet1190 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet1256 transcriptional regulator, LysR-family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Bpet4484 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D Bpet3918 transcriptional regulator, LysR-family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D Bpet0714 transcriptional regulator, LysR-family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Bpet1402 catR1; transcriptional regulator catR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Bpet3348 catR2; transcriptional regulator catR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Bpet3747 catR3; transcriptional regulator catR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Bpet3047 transcriptional regulator, LysR-family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator C DeoR family D Bpet2588 glpR; glpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D Bpet4897 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bpet0162 transcriptional regulator, LacI-family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D Bpet1664 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Bpet0416 transcriptional regulator, GntR-family K03710 K03710; GntR family transcriptional regulator D Bpet0867 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Bpet1819 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Bpet2904 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Bpet0853 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Bpet2681 transcriptional regulator, GntR-family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Bpet3877 transcriptional regulator, GntR-family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Bpet4197 transcriptional regulator, GntR-family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Bpet4687 transcriptional regulator, GntR-family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Bpet4865 glcC; glc operon transcriptional activator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D Bpet2244 transcriptional regulator, GntR-family K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D Bpet0243 transcriptional regulator, GntR-family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bpet3402 transcriptional regulator, GntR-family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bpet2921 transcriptional regulator, GntR-family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bpet3002 transcriptional regulator, GntR-family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bpet3078 transcriptional regulator, GntR-family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D Bpet4184 Putative HTH-type transcriptional regulator, AcrR-family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D Bpet0432 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator D Bpet3814 transcriptional regulator, TetR-family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bpet1592 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bpet3810 transcriptional regulator, TetR-family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bpet2991 transcriptional regulator, TetR-family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bpet3001 transcriptional regulator, TetR-family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bpet1435 transcriptional regulator, TetR-family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bpet4191 transcriptional regulator, TetR-family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Bpet0365 transcriptional regulator, TetR-family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family D Bpet2579 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet0682 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet2486 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet0026 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet0185 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet2818 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet0585 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet1830 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bpet0710 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D Bpet4173 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family C MarR family D Bpet2973 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Bpet2605 slyA; putative MarR-family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Bpet3188 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Bpet0248 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Bpet3387 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D Bpet2542 cueR; transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D Bpet1549 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Bpet4793 putative regulatory protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D Bpet3204 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Bpet4527 pcaR2; transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Bpet3592 pcaR1; transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Bpet3674 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D Bpet1161 transcriptional regulator, IclR family K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis D Bpet4676 transcriptional regulator, IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor C CRP/FNR family D Bpet4744 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Bpet3175 btr; transcriptional regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Bpet4047 probable transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D Bpet2778 unnamed protein product K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Bpet2615 putative conserved DNA-binding protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D Bpet1026 putative transcriptional regulator, ArsR-family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Bpet4553 arsR; putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family D Bpet3571 aroK1; aroK1 K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator D Bpet2181 predicted transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D Bpet1433 putative transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D Bpet1579 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Bpet4809 birA; putative biotin protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Bpet0907 fis; DNA-binding protein fis. K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Bpet3503 prpR; Propionate catabolism operon regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D Bpet4385 ner; Mu-like prophage FluMu DNA-binding protein Ner. K07724 ner; Ner family transcriptional regulator D Bpet2264 norR; Nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D Bpet3267 modE; Molybdenum transport protein modE. K02019 modE; molybdate transport system regulatory protein B Ribbon-helix-helix C CopG family C Other families D Bpet2655 putA; 1-pyrroline-5-carboxylate dehydrogenase / proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D Bpet4338 nosR; regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Bpet1708 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Bpet4974 parB; probable chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bpet2176 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bpet4557 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bpet1552 hrcA; heat-inducible transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor D Bpet1923 paaX; phenylacetic acid degradation operon negative regulatory protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D Bpet1028 alpA1; putative transcriptional regulator (phage-related) K07733 alpA; prophage regulatory protein D Bpet4314 alpA2; alpA2 K07733 alpA; prophage regulatory protein D Bpet1439 alpA3; predicted transcriptional regulator (phage-related) K07733 alpA; prophage regulatory protein D Bpet1289 putative transcriptional regulator (phage-related) K07733 alpA; prophage regulatory protein D Bpet2882 unnamed protein product K07733 alpA; prophage regulatory protein D Bpet4545 Predicted transcriptional regulator K07733 alpA; prophage regulatory protein D Bpet0244 negative transcriptional regulator K07734 paiB; transcriptional regulator D Bpet0561 unnamed protein product K07735 algH; putative transcriptional regulator D Bpet4795 dksA; putative dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D Bpet0615 predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D Bpet0689 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024 #
Classification taken and modified from TRANSFAC 7.0