+E Transcription factors KO
#
Transcription Factors - Burkholderia pseudomallei 1026b
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D BP1026B_I2130 gp67 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D BP1026B_I3656 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D BP1026B_II0645 pchR; AraC family transcription regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D BP1026B_I0584 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D BP1026B_I0094 O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D BP1026B_II0716 ftrA; transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D BP1026B_II0623 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D BP1026B_I0932 AraC family transcription regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D BP1026B_II0604 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D BP1026B_II1516 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D BP1026B_II1038 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_I3095 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_I3229 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_II0273 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_II0670 LysR family regulatory protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_II2276 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_II2286 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_I2138 Glycine cleavage system transcriptionalactivator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_II0151 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D BP1026B_II1382 pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D BP1026B_I0766 metR; transcriptional activator protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D BP1026B_II2170 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D BP1026B_I0445 oxyR; oxidative stress regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D BP1026B_II0264 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D BP1026B_II0031 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D BP1026B_I0361 cynR; DNA-binding transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D BP1026B_I2586 transcriptional regulator CysB-like protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D BP1026B_I1794 cbl; transcriptional regulator CysB-like protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D BP1026B_II0298 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D BP1026B_II0169 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D BP1026B_II0011 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D BP1026B_I2813 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D BP1026B_II0319 bpeT; LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D BP1026B_I2790 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D BP1026B_I2225 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D BP1026B_I0384 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D BP1026B_II0814 LysR family regulatory protein K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D BP1026B_II2029 transcriptional regulator CatR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D BP1026B_II2041 transcriptional regulator CatR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
C DeoR family
D BP1026B_I2831 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D BP1026B_II1564 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D BP1026B_I1790 ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BP1026B_II0601 LacI family regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BP1026B_I1518 LacI family transcription regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
C GntR family
D BP1026B_I0453 phnF; phosphonates metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D BP1026B_I0983 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D BP1026B_I3008 GntR family regulatory protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D BP1026B_I2654 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D BP1026B_II1413 transcriptional regulatory protein K03710 K03710; GntR family transcriptional regulator
D BP1026B_II1842 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BP1026B_I0363 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BP1026B_II0350 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BP1026B_II2220 Transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BP1026B_II1506 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BP1026B_II1864 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_II0309 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_I2065 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_II0800 GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_I2230 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_II1270 GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_II0557 GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BP1026B_I1598 Transcriptional regulator, GntR family K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D BP1026B_I1587 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
C TetR/AcrR family
D BP1026B_II1438 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D BP1026B_I2738 bpeR; repressor protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D BP1026B_I3317 slmA; Transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D BP1026B_II0300 Transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D BP1026B_II0792 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BP1026B_I1179 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BP1026B_I1763 amrR; Transcription repressor of multidrug effluxpump acrAB operon, TetR (AcrR) family K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D BP1026B_II2182 Acyclic terpenes utilization regulator AtuR,TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
C Lrp/AsnC family
D BP1026B_I3480 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I3177 transcription regulator AsnC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I0817 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I2699 transcription regulator AsnC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I3512 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_II2366 transcription regulator AsnC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I3715 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I2229 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_II0886 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_II1664 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_II1000 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_II1829 bkd operon transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BP1026B_I2271 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D BP1026B_I3166 transcription regulator AsnC K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
C LuxR family
D BP1026B_II0974 pmlR; Transcriptional regulator RhlR K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D BP1026B_II1672 LuxR family transcriptional regulator K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR
D BP1026B_II2469 GerE family regulatory protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D BP1026B_II1911 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D BP1026B_II0388 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D BP1026B_I1429 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D BP1026B_I0367 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BP1026B_I2726 transcriptional regulator np20 K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D BP1026B_II0301 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D BP1026B_I2278 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
C CRP/FNR family
D BP1026B_I2663 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BP1026B_II0032 Crp/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D BP1026B_II1230 Crp/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D BP1026B_II2056 Crp/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D BP1026B_I0961 cyclic nucleotide-binding domain-containing protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
C Rrf2 family
D BP1026B_I1040 iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D BP1026B_I0949 Rrf2 family protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D BP1026B_I1417 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D BP1026B_II1522 arsenical resistance transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
C PadR family
D BP1026B_I0059 PadR-like family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D BP1026B_I0377 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D BP1026B_I3108 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BP1026B_I0416 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D BP1026B_II0228 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D BP1026B_II1692 hipB; HipB domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D BP1026B_II0656 sigma-54 activated regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D BP1026B_II0145 transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D BP1026B_II1919 modE; transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D BP1026B_I1502 transcriptional regulatory protein K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D BP1026B_I3677 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D BP1026B_I1538 transcription regulator NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D BP1026B_II2126 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D BP1026B_I1354 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D BP1026B_I2129 gp58 K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BP1026B_I3696 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BP1026B_II2534 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BP1026B_I0479 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D BP1026B_I0061 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D BP1026B_II0966 regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D BP1026B_I0628 pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D BP1026B_I2589 hypothetical protein K07733 alpA; prophage regulatory protein
D BP1026B_I2231 transcriptional regulator PaiB-like protein K07734 paiB; transcriptional regulator
D BP1026B_I0626 hypothetical protein K07735 algH; putative transcriptional regulator
D BP1026B_I3309 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D BP1026B_I0556 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D BP1026B_I0273 mraZ; Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
#
Classification taken and modified from TRANSFAC 7.0