+D GENES KO
#
KEGG Orthology (KO) - Bacillus amyloliquefaciens LL3
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bql00010]
D LL3_02682 glcK; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D LL3_03202 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_03857 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LL3_04147 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D LL3_03860 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LL3_03538 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LL3_03541 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LL3_02990 gapB; glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D LL3_03539 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LL3_03537 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LL3_03536 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LL3_03006 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LL3_01564 pdhA; pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LL3_01565 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LL3_00839 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_01566 pdhC; pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00288 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_01930 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LL3_00510 adhA; putative dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_02031 yoxA; putative epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_03135 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D LL3_04004 licH; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_02135 bglA; aryl-6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_00314 bglC; aryl-phospho-beta-d-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_04020 gmuD; mannoside-phospho-beta-d-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_04071 bglH; aryl-phospho-beta-d-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_02404 ypqE; putative phosphotransferase system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LL3_01493 ptsG; phosphotransferase system (PTS) glucose-specific enzyme IICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:bql00020]
D LL3_01026 citA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D LL3_03002 citZ; citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D LL3_02600 2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LL3_01972 citB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LL3_03001 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LL3_02109 odhA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LL3_02108 odhB; 2-oxoglutarate dehydrogenase complex (dihydrolipoamide transsuccinylase, E2 subunit) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_01769 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LL3_01768 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LL3_02932 sdhA; succinate dehydrogenase (flavoprotein subunit) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LL3_02931 sdhB; succinate dehydrogenase (iron-sulfur protein) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LL3_02933 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LL3_03426 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LL3_01641 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D LL3_03135 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D LL3_01564 pdhA; pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LL3_01565 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LL3_00839 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_01566 pdhC; pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bql00030]
D LL3_03202 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LL3_02574 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LL3_01403 ykgB; putative 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D LL3_02575 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D LL3_01739 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LL3_01961 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LL3_03859 ywjH; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LL3_03840 ywlF; ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LL3_00318 hxlA; 3-hexulose-6-phosphate synthase (HPS) K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D LL3_00317 hxlB; 6-phospho-3-hexuloisomerase (PHI) K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D LL3_04088 dra; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D LL3_03734 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D LL3_02534 drm; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_00053 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LL3_00376 gdh; glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D LL3_00265 ycdF; general stress protein, glucose 1-dehydrogenase, survival of ethanol stress and low temperatures-like protein K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D LL3_03608 yvcT; putative 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LL3_03554 gntK; gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D LL3_03860 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LL3_03857 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LL3_04147 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:bql00040]
D LL3_00769 pel; pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D LL3_01330 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D LL3_03769 ywqF; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_03693 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_02016 yngB; putative UTP-sugar-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_03703 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_02967 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D LL3_01739 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LL3_02969 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D LL3_02968 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D LL3_01920 xylB; Xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D LL3_01919 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D LL3_00404 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D LL3_00649 gutB; glucitol (sorbitol) dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:bql00051]
D LL3_04023 gmuG; Beta-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D LL3_00651 ydjE; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LL3_04021 gmuE; mannose kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LL3_02790 manA; mannose-6 phosphate isomerase; cupin family K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_03712 yvyI; putative phosphohexomutase; cupin family K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_04022 gmuF; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_03857 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LL3_04147 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D LL3_00384 mtlD; mannitol-1-phosphate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D LL3_01543 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D LL3_00649 gutB; glucitol (sorbitol) dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D LL3_01919 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D LL3_03860 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LL3_03538 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LL3_03840 ywlF; ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LL3_01544 fruA; phosphotransferase system (PTS) fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LL3_02791 manP; PTS system, mannose-specific IIA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D LL3_00383 mtlA; PTS system, mannitol specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D LL3_00382 mtlA; PTS system, mannitol-specific enzyme II, BC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:bql00052]
D LL3_02031 yoxA; putative epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D LL3_03968 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LL3_03967 galT; galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D LL3_04038 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LL3_02016 yngB; putative UTP-sugar-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_03703 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_02682 glcK; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D LL3_03104 melA; alpha-D-galactoside galactohydrolase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_01305 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D LL3_01304 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D LL3_01303 lacE; PTS system, lactose-specific IIB component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D LL3_03594 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LL3_03947 sacA; sucrase-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LL3_03193 yugT; putative oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LL3_00266 ycdG; general stress protein, oligo-1,6-glucosidase-like protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:bql00053]
D LL3_03769 ywqF; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_03693 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_02967 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:bql00500]
D LL3_03948 sacP; phosphotransferase system (PTS) sucrose-specific enzyme IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D LL3_00171 murP; N-acetyl muramic acid-specific phosphotransferase system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D LL3_03594 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LL3_03947 sacA; sucrase-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D LL3_03193 yugT; putative oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LL3_04208 hypothetical protein K00692 sacB; levansucrase [EC:2.4.1.10]
D LL3_04209 levB; levanase K01212 sacC; levanase [EC:3.2.1.65]
D LL3_02016 yngB; putative UTP-sugar-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_03703 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_04005 licA; lichenan-specific phosphotransferase system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D LL3_04018 gmuA; glucomannan-specific phosphotransferase system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D LL3_04007 licB; trigger enzyme: lichenan-specific phosphotransferase system, EIIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D LL3_04017 ydhM; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D LL3_03990 ywbA; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D LL3_04006 licC; lichenan-specific phosphotransferase system, EIIC component K02761 celB; cellobiose PTS system EIIC component
D LL3_04019 gmuC; oligo-alpha-mannoside phosphotransferase system enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D LL3_04004 licH; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_02135 bglA; aryl-6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_00314 bglC; aryl-phospho-beta-d-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_04020 gmuD; mannoside-phospho-beta-d-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_04071 bglH; aryl-phospho-beta-d-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D LL3_00749 yfnH; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LL3_01723 amyA; Alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D LL3_00266 ycdG; general stress protein, oligo-1,6-glucosidase-like protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D LL3_02404 ypqE; putative phosphotransferase system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LL3_00845 malP; PTS system, maltose-specific enzyme IIBC component, putative K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D LL3_00843 malA; 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D LL3_00800 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D LL3_00801 treA; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_02682 glcK; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D LL3_03202 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LL3_00651 ydjE; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LL3_04021 gmuE; mannose kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bql00520]
D LL3_00169 ybbD; putative beta-hexosaminidase, putative lipoprotein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LL3_03344 csn; chitosanase K01233 csn; chitosanase [EC:3.2.1.132]
D LL3_02404 ypqE; putative phosphotransferase system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LL3_00793 nagP; phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D LL3_03638 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D LL3_03639 nagB; N-acetylglucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D LL3_00651 ydjE; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LL3_04021 gmuE; mannose kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LL3_00183 glmS; L-glutamine-D-fructose-6-phosphateamidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LL3_00180 glmM; phosphoglucomutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LL3_00052 gcaD; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LL3_00173 murQ; D-lactyl ether N-acetylmuramic-6-phosphate acid etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D LL3_03823 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LL3_03858 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LL3_01680 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LL3_03701 mnaA; UDP-N-acetylmannosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LL3_03533 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D LL3_02961 abfA; alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D LL3_02938 abf2; alpha-N-arabinofuranosidase II K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D LL3_01998 hypothetical protein K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D LL3_01917 xynB; Xylan beta-1,4-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D LL3_01493 ptsG; phosphotransferase system (PTS) glucose-specific enzyme IICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D LL3_02682 glcK; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_02016 yngB; putative UTP-sugar-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_03703 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_03769 ywqF; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_03693 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_03968 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LL3_03967 galT; galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D LL3_04038 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LL3_03202 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LL3_02790 manA; mannose-6 phosphate isomerase; cupin family K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_03712 yvyI; putative phosphohexomutase; cupin family K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_04022 gmuF; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_03530 Pleiotropic regulatory protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D LL3_00749 yfnH; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LL3_00750 yfnG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
C 00620 Pyruvate metabolism [PATH:bql00620]
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_01564 pdhA; pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LL3_01565 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LL3_00839 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_01566 pdhC; pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_01930 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00510 adhA; putative dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LL3_03025 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LL3_03910 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LL3_03006 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LL3_03008 accA; acetyl-CoA carboxylase (carboxyltransferase alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LL3_02631 accB; acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02021 Biotin/lipoyl attachment protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02630 accC; acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_02022 yngH; biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_03009 accD; acetyl-CoA carboxylase (carboxyltransferase beta subunit) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LL3_00787 yflL; putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_00418 ydaP; putative enzyme with pyruvate as substrate K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D LL3_00288 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LL3_02170 hypothetical protein K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D LL3_03470 yvgN; Glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D LL3_02993 ytbE; putative aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D LL3_02148 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LL3_04229 yyaH; putative lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LL3_03989 ywbC; glyoxylase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LL3_00736 yetH; putative lyase/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LL3_02677 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LL3_03608 yvcT; putative 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LL3_03011 ytsJ; NADP-dependent malic enzyme (conversion of malate into pyruvate) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_03853 maeA; putative NAD-dependent malate dehydrogenase II (NAD-ME II) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_02541 mleA; NAD-dependent malic enzyme (conversion of malate into pyruvate) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_03079 malS; putative NAD-dependent malic enzyme 3 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_01641 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LL3_03426 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LL3_03135 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02915 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bql00630]
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LL3_01026 citA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D LL3_03002 citZ; citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D LL3_02600 2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LL3_01972 citB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02581 yqjC; putative lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D LL3_02580 yqjD; putative acyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LL3_02958 glcD; glycolate oxidase subunit K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D LL3_02959 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D LL3_00959 katA; vegetative catalase 1 K03781 katE; catalase [EC:1.11.1.6]
D LL3_04052 katE; secondary transporter of divalent metal ions/citrate complexes K03781 katE; catalase [EC:1.11.1.6]
D LL3_04024 katX; major spore catalase K03781 katE; catalase [EC:1.11.1.6]
D LL3_03608 yvcT; putative 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LL3_01907 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LL3_03838 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LL3_02652 gcvP; glycine decarboxylase (subunit 1) (glycine cleavage system protein P) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LL3_02651 gcvP; glycine decarboxylase (subunit 2) (glycine cleavage system protein P) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LL3_02653 gcvT; aminomethyltransferase (glycine cleavage system protein T) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_03400 yusH; putative glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D LL3_00014 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D LL3_00541 ycsA; putative tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D LL3_02435 oxdC; oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D LL3_03450 oxdC; oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D LL3_02808 yrhE; Putative formate dehydrogenase yrhE K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LL3_01314 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LL3_01410 ykkE; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:bql00640]
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03025 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LL3_03910 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LL3_02591 bkdA; branched-chain alpha-keto acid dehydrogenase E1 subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LL3_02590 bkdA; branched-chain alpha-keto acid dehydrogenase E1 subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LL3_02589 bkdB; branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00562 hypothetical protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D LL3_03008 accA; acetyl-CoA carboxylase (carboxyltransferase alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LL3_02631 accB; acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02021 Biotin/lipoyl attachment protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02630 accC; acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_02022 yngH; biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_03009 accD; acetyl-CoA carboxylase (carboxyltransferase beta subunit) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_02580 yqjD; putative acyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LL3_02581 yqjC; putative lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D LL3_01768 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LL3_01769 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LL3_04111 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LL3_02599 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D LL3_02598 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D LL3_00288 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LL3_02431 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D LL3_00531 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D LL3_03470 yvgN; Glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D LL3_02993 ytbE; putative aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:bql00650]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02602 mmgB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D LL3_03404 fadN; 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA) K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LL3_02019 yngF; putative enoyl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D LL3_02155 yodS; putative aminoacyloate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D LL3_02154 yodR; putative acyloate-acetoacetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D LL3_02593 buk; branched-chain fatty-acid kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D LL3_02595 ptb; phosphate butyryl coenzyme A transferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D LL3_00541 ycsA; putative tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D LL3_02932 sdhA; succinate dehydrogenase (flavoprotein subunit) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LL3_02931 sdhB; succinate dehydrogenase (iron-sulfur protein) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LL3_02933 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_00374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LL3_02020 yngG; putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LL3_02008 scoA; succinyl CoA:3-oxoacid CoA-transferase (subunit A) K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LL3_02007 scoB; succinyl CoA:3-oxoacid CoA-transferase (subunit B) K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LL3_02006 yxjF; putative dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D LL3_02918 ilvB; acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_03742 alsS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_02917 ilvH; acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LL3_03741 alsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D LL3_00661 bdhA; acetoine/butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D LL3_01924 gutB; alcohol dehydrogenase, zinc-containing K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D LL3_00159 gutB; zinc-containing alcohol dehydrogenase, long-chain K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:bql00660]
D LL3_02918 ilvB; acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_03742 alsS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_02917 ilvH; acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LL3_03741 alsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D LL3_01768 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LL3_01769 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LL3_02913 leuC; 3-isopropylmalate dehydratase (large subunit) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LL3_02912 leuD; 3-isopropylmalate dehydratase (small subunit) K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LL3_02914 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bql00562]
D LL3_01576 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LL3_00158 yktc; putative inorganic polyphosphate/ATP-NAD kinase Poly(P)/ATP NAD kinase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LL3_02166 phy; Phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D LL3_04105 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D LL3_04103 iolI; inosose isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D LL3_01173 yisS; putative dehydrogenase K16043 iolX; scyllo-inositol 2-dehydrogenase (NAD+) [EC:1.1.1.370]
D LL3_03484 hypothetical protein K16044 iolW; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.371]
D LL3_03184 yulF; enzyme involved in biofilm formation K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D LL3_04107 iolE; 2-keto-myo-inositol dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D LL3_04108 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D LL3_04110 iolB; 5-deoxy-D-glucuronic acid isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D LL3_04109 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D LL3_04102 iolJ; 2-deoxy-5-keto-gluconic acid-6-phosphate aldolase, formation of dihydroxyacetone phosphate and malonic semialdehyde (6th reaction) K03339 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase [EC:4.1.2.29]
D LL3_04111 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LL3_03538 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bql00190]
D LL3_03279 yumB; putative NAD-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LL3_03298 yutJ; putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LL3_01326 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LL3_02932 sdhA; succinate dehydrogenase (flavoprotein subunit) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LL3_02931 sdhB; succinate dehydrogenase (iron-sulfur protein) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LL3_02933 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LL3_02440 qcrA; menaquinol:cytochrome c oxidoreductase (iron-sulfur subunit) K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D LL3_02439 qcrB; Menaquinol-cytochrome c reductase cytochrome b subunit K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D LL3_02438 qcrC; menaquinol:cytochrome c oxidoreductase (cytochrome cc subunit) K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D LL3_00852 heme O synthase (minor enzyme) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_00853 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01643 ctaB; cytochrome caa3 oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01648 ctaF; cytochrome c oxidase subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D LL3_01647 ctaE; cytochrome caa3 oxidase (subunit III) K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LL3_01646 ctaD; cytochrome caa3 oxidase (subunit I) K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LL3_01645 ctaC; cytochrome caa3 oxidase (subunit II) K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LL3_01642 ctaA; heme-A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D LL3_03962 qoxD; cytochrome aa3-600 quinol oxidase (subunit IV) K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D LL3_03963 qoxC; cytochrome aa3-600 quinol oxidase (subunit III) K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D LL3_03964 qoxB; cytochrome o ubiquinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D LL3_03965 qoxA; cytochrome aa3-600 quinol oxidase (subunit II) K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D LL3_03150 ythA; putative cytochrome d oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LL3_04031 cydA; cytochrome bd ubiquinol oxidase (subunit I) K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LL3_03151 ythB; putative cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LL3_04030 cydB; cytochrome bd ubiquinol oxidase (subunit II) K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LL3_03830 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LL3_03828 atpD; ATP synthase (subunit beta, component F1) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LL3_03829 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LL3_03831 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LL3_03827 atpC; ATP synthase (subunit epsilon, F1 subunit) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LL3_03834 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LL3_03832 atpF; ATP synthase (subunit b, component F0) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LL3_03833 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LL3_04206 ppaC; inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D LL3_03635 ppaX; P-Ser-HPr phosphatase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bql00710]
D LL3_03539 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LL3_03541 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LL3_02990 gapB; glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D LL3_03860 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LL3_03857 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LL3_04147 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D LL3_01961 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LL3_03840 ywlF; ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LL3_03538 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LL3_01739 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LL3_03859 ywjH; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LL3_03135 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:bql00720]
D LL3_01641 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LL3_03426 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LL3_02932 sdhA; succinate dehydrogenase (flavoprotein subunit) K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LL3_02931 sdhB; succinate dehydrogenase (iron-sulfur protein) K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LL3_02933 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LL3_01769 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LL3_01768 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_03001 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LL3_01972 citB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LL3_03008 accA; acetyl-CoA carboxylase (carboxyltransferase alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LL3_02631 accB; acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02021 Biotin/lipoyl attachment protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02630 accC; acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_02022 yngH; biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_03009 accD; acetyl-CoA carboxylase (carboxyltransferase beta subunit) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LL3_02581 yqjC; putative lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D LL3_02626 folD; methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LL3_03910 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LL3_03025 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:bql00680]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_02808 yrhE; Putative formate dehydrogenase yrhE K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LL3_01314 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LL3_03838 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LL3_03536 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LL3_03860 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LL3_03857 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D LL3_04147 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_00317 hxlB; 6-phospho-3-hexuloisomerase (PHI) K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D LL3_00318 hxlA; 3-hexulose-6-phosphate synthase (HPS) K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D LL3_03025 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LL3_03910 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03537 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LL3_02066 yoaD; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_02492 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_01092 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LL3_02981 ysaA; putative phosphatase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:bql00910]
D LL3_03878 narK; nitrite extrusion permease K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LL3_03874 narG; nitrate reductase (alpha subunit) K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03873 narH; nitrate reductase (beta subunit) K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03871 narI; nitrate reductase (gamma subunit) K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LL3_00308 nasD; assimilatory nitrite reductase subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D LL3_00307 nasE; assimilatory nitrite reductase subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D LL3_03192 yrpB; putative anionic nitroalkane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LL3_02480 gudB; cryptic glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_03925 rocG; NAD-specific glutamate dehydrogenase (NAD-GDH) RocG K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_01907 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LL3_02044 gltA; glutamate synthase (large subunit) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LL3_02043 gltB; glutamate synthase (small subunit) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LL3_03606 yvdA; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LL3_03148 ytiB; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bql00920]
D LL3_00963 ssuA; aliphatic sulfonate ABC transporter (binding lipoprotein) K15553 ssuA; sulfonate transport system substrate-binding protein
D LL3_00964 ssuC; aliphatic sulfonate ABC transporter (permease) K15554 ssuC; sulfonate transport system permease protein
D LL3_00962 ssuB; aliphatic sulfonate ABC transporter (ATP-binding protein) K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LL3_00965 ssuD; FMNH2-dependent aliphatic sulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D LL3_01718 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D LL3_01719 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D LL3_03016 nrnA; oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D LL3_01716 cysH; (phospho)adenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D LL3_03474 cysJ; sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D LL3_03473 yvgQ; Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D LL3_00096 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LL3_00075 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LL3_03087 ytkP; putative cysteine synthase-like protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LL3_02196 metA; putative homoserine O-acetyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D LL3_01275 metI; O-succinylhomoserine lyase (L-cysteine, H2S, methanethiol, elimination) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LL3_02811 mccB; cystathionine lyase/homocysteine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bql00061]
D LL3_03008 accA; acetyl-CoA carboxylase (carboxyltransferase alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LL3_02631 accB; acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02021 Biotin/lipoyl attachment protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LL3_02630 accC; acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_02022 yngH; biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LL3_03009 accD; acetyl-CoA carboxylase (carboxyltransferase beta subunit) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LL3_01752 acpA; Acyl carrier protein K02078 acpP; acyl carrier protein
D LL3_02003 ituD; malonyl-CoA transacylase ItuD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LL3_01750 fabD; malonyl CoA:acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LL3_01212 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LL3_01107 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III, putative K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LL3_01213 fabF; beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LL3_00533 beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LL3_03496 yvaG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01847 ymfI; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03020 ytkK; putative 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01751 fabG; beta-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03783 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LL3_01253 fabI; enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LL3_00935 fabL; enoyl-acyl carrier protein reductase III K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D LL3_01115 lcfB; long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_02943 lcfA; long chain acyl-CoA ligase (degradative) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bql00071]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_03403 fadA; acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LL3_03404 fadN; 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA) K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LL3_02941 fadB; putative enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D LL3_01115 lcfB; long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_02943 lcfA; long chain acyl-CoA ligase (degradative) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_01930 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_02800 yrhJ; putative bifunctional P-450/NADPH-P450 reductase 2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D LL3_00745 yetO; putative cytochrome P450 CYP102A2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bql00561]
D LL3_00014 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_00510 adhA; putative dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LL3_00531 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D LL3_01010 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LL3_01749 plsX; phosphate:acyl-ACP acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LL3_01980 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LL3_01033 plsC; acyl-ACP:1-acylglycerolphosphateacyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LL3_02185 ypkP; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LL3_00716 dgkB; diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LL3_02197 ugtP; UDP-glucose diacylglyceroltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D LL3_00747 yfnI; sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_00795 ltaS; lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_03460 yvgJ; sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_03461 yvgJ; sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_03104 melA; alpha-D-galactoside galactohydrolase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:bql00564]
D LL3_02468 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LL3_01011 glpD; glycerol-3-phosphate oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LL3_01980 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LL3_01033 plsC; acyl-ACP:1-acylglycerolphosphateacyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LL3_02185 ypkP; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LL3_03708 tagD; Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D LL3_00716 dgkB; diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LL3_03130 ytpA; phospholipase component of bacilysocin synthesis or export K01048 pldB; lysophospholipase [EC:3.1.1.5]
D LL3_00207 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LL3_01042 yhdW; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LL3_02604 yqiK; putative glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LL3_02362 glyc; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LL3_01814 cdsA; phosphatidate cytidylyltransferase (CDP-diglyceride synthase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LL3_00218 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LL3_00220 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LL3_01851 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LL3_03805 clsA; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LL3_03866 acdA; acyl-CoA dehydrogenase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LL3_03870 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LL3_02052 clpS; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LL3_04146 clpS; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LL3_02965 araM; putative metabolite-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D LL3_00704 pcrB; (S)-3-O-geranylgeranylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D LL3_03634 yvoF; putative O-acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:bql00600]
D LL3_02134 Endo-1,6-beta-D-glucanase BGN16.3 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D LL3_03104 melA; alpha-D-galactoside galactohydrolase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:bql00592]
D LL3_03403 fadA; acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bql00230]
D LL3_02547 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LL3_02534 drm; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_00053 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LL3_00691 purF; glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LL3_00695 purD; phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D LL3_00693 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LL3_00216 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D LL3_00690 purL; phosphoribosylformylglycinamidine synthetase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D LL3_00688 purS; factor required for phosphoribosylformylglycinamidine synthetase activity K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D LL3_00689 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LL3_00692 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LL3_00685 purK; phosphoribosylaminoimidazole carboxylase; ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D LL3_00684 purE; phosphoribosylaminoimidazole carboxylase I K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LL3_00687 purC; phosphoribosylaminoimidazole succinocarboxamide synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LL3_00686 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LL3_00694 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LL3_02851 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LL3_01000 yhcR; non specific extracellular endonuclease cleaving RNA and DNA K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LL3_03314 yunD; putative nuclease/nucleotidase/phosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LL3_02533 pupG; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LL3_02141 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LL3_01694 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LL3_00070 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D LL3_00009 guaB; inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LL3_02458 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LL3_02923 ysnA; inosine/xanthosine triphosphate pyrophosphatase (subunit A) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LL3_02393 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D LL3_00674 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LL3_03283 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D LL3_01728 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LL3_02247 nrdE; Ribonucleoside-diphosphate reductase nrdEB subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LL3_01898 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LL3_02243 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LL3_01899 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LL3_00016 dgk; deoxyguanosine kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D LL3_02850 relA; GTP pyrophosphokinase (RelA/SpoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LL3_01240 yjbM; (p)ppGpp synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D LL3_03995 ywaC; (p)ppGpp synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D LL3_04186 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LL3_00015 dck; deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D LL3_00699 yerA; putative amidohydrolase K01486 ade; adenine deaminase [EC:3.5.4.2]
D LL3_01556 adeC; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D LL3_00806 yfkN; extracellular 2'',3'' cyclic nucleotide phosphodiesterase, 2'' (or 3'') nucleotidase and 5'' nucleotidase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D LL3_01856 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D LL3_00137 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LL3_01719 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D LL3_01718 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D LL3_03318 pucH; allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D LL3_03325 pucF; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D LL3_03324 pucG; putative ureidoglycolate lyase (ureidoglycolase) K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D LL3_03810 ureC; urease (alpha subunit) K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D LL3_03811 ureB; urease (beta subunit) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D LL3_03812 ureA; urease (gamma subunit) K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D LL3_03753 ywrD; putative gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:bql00240]
D LL3_01203 carB; arginine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LL3_01710 pyrA; pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LL3_01202 carA; arginine-specific carbamoyl-phosphate synthetase (small subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LL3_01709 pyrA; pyrimidine-specific carbamoyl-phosphate synthetase (small subunit, glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LL3_01707 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LL3_01708 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LL3_01712 pyrD; dihydroorotate dehydrogenase (catalytic subunit) K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D LL3_01711 pyrK; dihydroorotate dehydrogenase (electron transfer subunit) K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D LL3_01714 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LL3_01713 pyrF; orotidine 5''-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LL3_01811 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LL3_02458 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LL3_02890 maf; putative septum formation DNA-binding protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LL3_03863 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LL3_02473 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LL3_02819 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D LL3_01000 yhcR; non specific extracellular endonuclease cleaving RNA and DNA K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LL3_03314 yunD; putative nuclease/nucleotidase/phosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LL3_00806 yfkN; extracellular 2'',3'' cyclic nucleotide phosphodiesterase, 2'' (or 3'') nucleotidase and 5'' nucleotidase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D LL3_03837 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D LL3_01704 pyrR; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LL3_01856 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D LL3_04086 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D LL3_02725 cdd; cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D LL3_02247 nrdE; Ribonucleoside-diphosphate reductase nrdEB subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LL3_01898 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LL3_02243 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LL3_01899 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LL3_00015 dck; deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D LL3_02754 comE; ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D LL3_00030 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LL3_01950 yncF; putative deoxyuridine 5''-triphosphate pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LL3_02239 yncF; putative deoxyuridine 5'-triphosphate nucleotidohydrolase yncF K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LL3_03854 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D LL3_02187 thyB; thymidylate synthase B K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LL3_02233 thyA; Thymidylate synthase 1 K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bql00250]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_02872 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LL3_02544 ansA; exported L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LL3_01167 asnO; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LL3_03133 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LL3_01459 mtnU; Methylthioribose kinase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D LL3_03262 ald; L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LL3_02543 ansB; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D LL3_03023 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LL3_03022 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LL3_04186 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LL3_00686 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LL3_01707 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_00374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LL3_02044 gltA; glutamate synthase (large subunit) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LL3_02043 gltB; glutamate synthase (small subunit) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LL3_02480 gudB; cryptic glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_03925 rocG; NAD-specific glutamate dehydrogenase (NAD-GDH) RocG K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_00302 ycgN; ABC-Transporter (ATP-binding protein)-like protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D LL3_03923 rocA; delta-1-pyrroline-5 carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D LL3_01907 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LL3_01203 carB; arginine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LL3_01710 pyrA; pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LL3_01202 carA; arginine-specific carbamoyl-phosphate synthetase (small subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LL3_01709 pyrA; pyrimidine-specific carbamoyl-phosphate synthetase (small subunit, glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LL3_00229 ybgJ; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_01638 glsB; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_00689 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LL3_00183 glmS; L-glutamine-D-fructose-6-phosphateamidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LL3_00691 purF; glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bql00260]
D LL3_00361 yclM; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01835 dapG; aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_02935 lysC; aspartokinase II alpha subunit / beta subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01834 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LL3_03304 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LL3_03302 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D LL3_03303 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LL3_03838 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LL3_03608 yvcT; putative 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LL3_00014 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D LL3_03537 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LL3_02066 yoaD; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_02492 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_01092 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LL3_02981 ysaA; putative phosphatase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
D LL3_01859 kbl; 2-amino-3-ketobutyrate CoA ligase (glycine acetyl transferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LL3_01858 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D LL3_02652 gcvP; glycine decarboxylase (subunit 1) (glycine cleavage system protein P) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LL3_02651 gcvP; glycine decarboxylase (subunit 2) (glycine cleavage system protein P) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LL3_02653 gcvT; aminomethyltransferase (glycine cleavage system protein T) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_03400 yusH; putative glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D LL3_00218 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LL3_03168 gbsB; choline dehydrogenase (FAD-dependent) K11440 gbsB; choline dehydrogenase [EC:1.1.1.1]
D LL3_03169 gbsA; glycine betaine aldehyde dehydrogenase, NAD+-dependent K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D LL3_02811 mccB; cystathionine lyase/homocysteine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D LL3_01745 sdaA; L-serine dehydratase (beta chain) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LL3_01746 sdaA; L-serine dehydratase (alpha chain) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LL3_02182 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LL3_02563 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D LL3_00490 racX; amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D LL3_02448 trpA; tryptophan synthase (alpha subunit) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LL3_02449 trpB; tryptophan synthase (beta subunit) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bql00270]
D LL3_00096 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LL3_00075 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LL3_03087 ytkP; putative cysteine synthase-like protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LL3_02811 mccB; cystathionine lyase/homocysteine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D LL3_01276 metC; cystathionine beta-lyase YjcJ K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LL3_03213 patB; C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LL3_02812 mccA; O-acetylserine-thiol-lyase K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D LL3_00227 ybgG; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D LL3_01179 yitJ; homocysteine S-methyltransferase using (R,S)AdoMet and methylenetetrahydrofolate reductase [NAD(P)H] K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D LL3_01423 metE; cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D LL3_03134 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LL3_02989 speD; S-adenosylmethionine decarboxylase alpha chain K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D LL3_03886 speE; spermidine synthase; polyamine metabolism K00797 speE; spermidine synthase [EC:2.5.1.16]
D LL3_02813 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D LL3_01458 mtnK; methylthioribose kinase (methionine salvage pathway) K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D LL3_01694 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LL3_01457 mtnA; methylthioribose-1-phosphate isomerase (methionine salvage pathway) K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D LL3_01463 mtnB; methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D LL3_01461 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphateenolase K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D LL3_01462 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D LL3_01464 mtnD; Acireductone dioxygenase; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D LL3_01460 mtnE; methionine-glutamine aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D LL3_03043 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D LL3_04074 ddeM; DNA (cytosine-5)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_03374 ydiP; putative DNA (Cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02261 mtbP; Modification methylase Rho11sI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00602 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02814 yrrT; putative AdoMet-dependent methyltransferase K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D LL3_03146 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D LL3_00361 yclM; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01835 dapG; aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_02935 lysC; aspartokinase II alpha subunit / beta subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01834 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LL3_03304 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LL3_02196 metA; putative homoserine O-acetyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D LL3_01275 metI; O-succinylhomoserine lyase (L-cysteine, H2S, methanethiol, elimination) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LL3_00225 ybgE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_04003 ilvK; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_00288 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LL3_00490 racX; amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D LL3_03000 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LL3_01745 sdaA; L-serine dehydratase (beta chain) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LL3_01746 sdaA; L-serine dehydratase (alpha chain) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LL3_02066 yoaD; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_02492 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_01092 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bql00280]
D LL3_00225 ybgE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_04003 ilvK; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_02594 bcd; branched-chain amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D LL3_02591 bkdA; branched-chain alpha-keto acid dehydrogenase E1 subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LL3_02590 bkdA; branched-chain alpha-keto acid dehydrogenase E1 subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LL3_02589 bkdB; branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_03403 fadA; acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LL3_02580 yqjD; putative acyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LL3_02581 yqjC; putative lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D LL3_01499 ykwC; putative beta-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D LL3_04111 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_02020 yngG; putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LL3_02008 scoA; succinyl CoA:3-oxoacid CoA-transferase (subunit A) K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LL3_02007 scoB; succinyl CoA:3-oxoacid CoA-transferase (subunit B) K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bql00290]
D LL3_02182 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LL3_02913 leuC; 3-isopropylmalate dehydratase (large subunit) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LL3_02912 leuD; 3-isopropylmalate dehydratase (small subunit) K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LL3_02914 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D LL3_02918 ilvB; acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_03742 alsS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_02917 ilvH; acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LL3_02916 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LL3_02191 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LL3_00225 ybgE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_04003 ilvK; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_02594 bcd; branched-chain amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D LL3_02915 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bql00300]
D LL3_03304 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LL3_00361 yclM; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01835 dapG; aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_02935 lysC; aspartokinase II alpha subunit / beta subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01834 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LL3_01836 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LL3_02432 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LL3_01201 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LL3_03088 ytjP; putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LL3_03295 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LL3_02521 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LL3_01522 dapH; tetrahydrodipicolinate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D LL3_01503 patA; aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D LL3_01523 dapL; N-acetyl-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D LL3_01675 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LL3_00456 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bql00310]
D LL3_02108 odhB; 2-oxoglutarate dehydrogenase complex (dihydrolipoamide transsuccinylase, E2 subunit) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_00490 racX; amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_00374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LL3_02151 kamA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D LL3_02155 yodS; putative aminoacyloate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D LL3_02154 yodR; putative acyloate-acetoacetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D LL3_01047 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bql00220]
D LL3_01204 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D LL3_03023 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LL3_03022 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LL3_04167 argI; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LL3_03810 ureC; urease (alpha subunit) K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D LL3_03811 ureB; urease (beta subunit) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D LL3_03812 ureA; urease (gamma subunit) K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D LL3_00786 nos; nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D LL3_00229 ybgJ; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_01638 glsB; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_00689 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LL3_01907 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LL3_01203 carB; arginine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LL3_01710 pyrA; pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LL3_01202 carA; arginine-specific carbamoyl-phosphate synthetase (small subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LL3_01709 pyrA; pyrimidine-specific carbamoyl-phosphate synthetase (small subunit, glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LL3_02480 gudB; cryptic glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_03925 rocG; NAD-specific glutamate dehydrogenase (NAD-GDH) RocG K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01199 argJ; ornithine acetyltransferase; amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D LL3_01200 argB; N-acetylglutamate 5-phosphotransferase (acetylglutamate kinase) K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D LL3_01198 argC; N-acetylglutamate gamma-semialdehyde dehydrogenase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D LL3_01201 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LL3_02153 yodQ; putative deacylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:bql00330]
D LL3_01571 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D LL3_03885 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D LL3_03886 speE; spermidine synthase; polyamine metabolism K00797 speE; spermidine synthase [EC:2.5.1.16]
D LL3_02989 speD; S-adenosylmethionine decarboxylase alpha chain K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_00536 bltD; spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D LL3_00786 nos; nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D LL3_04167 argI; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LL3_04169 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D LL3_02047 proH; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LL3_02566 proI; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LL3_00301 ycgM; proline oxidase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D LL3_03406 fadM; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D LL3_00302 ycgN; ABC-Transporter (ATP-binding protein)-like protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D LL3_03923 rocA; delta-1-pyrroline-5 carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D LL3_02046 proJ; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LL3_01411 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LL3_01412 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01047 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:bql00340]
D LL3_03631 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LL3_03632 hisZ; histidyl-tRNA synthetase component of ATP phosphoribosyltransferase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D LL3_03625 hisI; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D LL3_03627 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D LL3_03628 hisH; amidotransferase (glutaminase) K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LL3_03626 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LL3_03629 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D LL3_02447 hisC; histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LL3_03041 hisJ; histidinol phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D LL3_03630 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D LL3_04081 hutH; histidine ammonia-lyase (histidase) K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LL3_04082 hutU; urocanase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D LL3_04083 hutI; imidazolone-5-propionate hydrolase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D LL3_04084 hutG; formiminoglutamate hydrolase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:bql00350]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_02447 hisC; histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_01930 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LL3_00211 yoaI; putative 4-hydroxyphenylacetate-3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D LL3_00374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:bql00360]
D LL3_02602 mmgB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_02447 hisC; histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LL3_01047 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:bql00380]
D LL3_02108 odhB; 2-oxoglutarate dehydrogenase complex (dihydrolipoamide transsuccinylase, E2 subunit) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_02800 yrhJ; putative bifunctional P-450/NADPH-P450 reductase 2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D LL3_00745 yetO; putative cytochrome P450 CYP102A2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D LL3_00959 katA; vegetative catalase 1 K03781 katE; catalase [EC:1.11.1.6]
D LL3_04052 katE; secondary transporter of divalent metal ions/citrate complexes K03781 katE; catalase [EC:1.11.1.6]
D LL3_04024 katX; major spore catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bql00400]
D LL3_03066 aroA; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; chorismate mutase-isozyme 3 K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D LL3_02455 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LL3_00810 aroC; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D LL3_02762 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LL3_00298 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LL3_02445 aroE; 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvoylshikimate-3-phosphate synthase) K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LL3_02456 aroF; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LL3_02453 trpE; anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LL3_02452 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LL3_02450 trpF; phosphoribosyl anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D LL3_02451 trpC; indol-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D LL3_02448 trpA; tryptophan synthase (alpha subunit) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LL3_02449 trpB; tryptophan synthase (beta subunit) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LL3_02454 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D LL3_02876 yszB; UPF0735 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D LL3_02446 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LL3_02875 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_02447 hisC; histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bql00410]
D LL3_02424 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_02425 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LL3_04111 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bql00430]
D LL3_02037 ggt; membrane bound gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LL3_01007 yhxA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like protein K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D LL3_03262 ald; L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LL3_02480 gudB; cryptic glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_03925 rocG; NAD-specific glutamate dehydrogenase (NAD-GDH) RocG K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D LL3_03910 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LL3_03025 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bql00450]
D LL3_01275 metI; O-succinylhomoserine lyase (L-cysteine, H2S, methanethiol, elimination) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LL3_01276 metC; cystathionine beta-lyase YjcJ K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LL3_03213 patB; C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LL3_01179 yitJ; homocysteine S-methyltransferase using (R,S)AdoMet and methylenetetrahydrofolate reductase [NAD(P)H] K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D LL3_01423 metE; cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D LL3_03387 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LL3_03617 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LL3_01718 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D LL3_00040 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bql00460]
D LL3_02037 ggt; membrane bound gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LL3_02544 ansA; exported L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LL3_03838 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bql00470]
D LL3_02615 alrB; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LL3_00465 alrA; D-alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LL3_01047 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LL3_00455 ddl; D-alanyl-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LL3_03999 dltA; D-alanine:D-alanyl-carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D LL3_04001 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D LL3_00490 racX; amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D LL3_00229 ybgJ; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_01638 glsB; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_00689 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LL3_02926 racE; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LL3_01677 murD; UDP-N-acetylmuramoylalanyl-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LL3_01400 ykfB; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D LL3_02563 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D LL3_03295 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LL3_02521 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bql00480]
D LL3_02037 ggt; membrane bound gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LL3_01554 hypothetical protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D LL3_00388 ycsF; putative nitrogen-containing heterocycle degradation enzyme K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D LL3_03274 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LL3_03001 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LL3_02575 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D LL3_02574 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LL3_02194 bsaA; putative peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D LL3_03886 speE; spermidine synthase; polyamine metabolism K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:bql00511]
D LL3_03711 lytD; exported N-acetylglucosaminidase (major autolysin) (CWBP90) K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
D LL3_02134 Endo-1,6-beta-D-glucanase BGN16.3 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:bql00542]
D LL3_03688 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bql00541]
D LL3_02016 yngB; putative UTP-sugar-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_03703 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LL3_04038 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LL3_03769 ywqF; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_03693 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LL3_03930 spsI; spore coat polysaccharide synthesis protein SpsI K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LL3_03929 spsJ; spore coat polysaccharide synthesis protein SpsJ K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LL3_03927 spsL; spore coat polysaccharide synthesis protein SpsL K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LL3_03928 spsK; spore coat polysaccharide synthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LL3_03934 spsD; Spore coat polysaccharide biosynthesis protein spsD K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D LL3_00749 yfnH; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LL3_00750 yfnG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D LL3_02790 manA; mannose-6 phosphate isomerase; cupin family K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_03712 yvyI; putative phosphohexomutase; cupin family K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_04022 gmuF; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D LL3_03530 Pleiotropic regulatory protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D LL3_00052 gcaD; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LL3_03701 mnaA; UDP-N-acetylmannosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LL3_03533 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:bql00550]
D LL3_03823 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LL3_03858 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LL3_01680 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LL3_03070 murC; UDP-N-acetyl muramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LL3_01677 murD; UDP-N-acetylmuramoylalanyl-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LL3_01675 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LL3_00455 ddl; D-alanyl-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LL3_00456 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LL3_02726 dgkA; undecaprenol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D LL3_01813 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LL3_03181 yubB; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LL3_03798 bcrC; undecaprenyl pyrophosphate phosphatase, bacitracin resistance K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LL3_01676 mraY; phospho-N-acetylmuramoyl-pentapeptidetransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LL3_01679 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LL3_02413 ponA; peptidoglycan glycosyltransferase (penicillin-binding proteins 1A and 1B) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LL3_01100 pbpF; penicillin-binding protein 2C required for spore germination K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D LL3_03218 pbpD; penicillin-binding protein 4 K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D LL3_03887 pbpG; penicillin-binding protein 2d K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D LL3_01673 pbpB; penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B
D LL3_01674 spoV; penicillin-binding protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D LL3_02696 pbpA; transpeptidase (penicillin-binding protein 2A) K21465 pbpA; penicillin-binding protein A
D LL3_01501 pbpH; penicillin-binding enzyme for formation of rod-shaped peptidoglycan cell wall K21466 pbpH; penicillin-binding protein H
D LL3_02532 dacF; D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_00010 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_02503 dacB; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_02030 dacC; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LL3_00170 ybbE; putative protein precursor; beta-lactamase-like protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D LL3_02140 yodJ; D-alanyl-D-alanine carboxypeptidase lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:bql00552]
D LL3_03181 yubB; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LL3_03798 bcrC; undecaprenyl pyrophosphate phosphatase, bacitracin resistance K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LL3_03688 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D LL3_03709 tagA; N-acetylmannosamine (ManNAc) C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid (GlcNAc-pp-undecaprenyl, lipid I) glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D LL3_03710 tagB; teichoic acid primase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D LL3_03706 tagF; CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase (poly(glycerol phosphate) polymerase) K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D LL3_03707 tagE; UDP-glucose:polyglycerol phosphate alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D LL3_03999 dltA; D-alanine:D-alanyl-carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D LL3_04001 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D LL3_04000 dltB; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D LL3_04002 dltD; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid synthesis K03740 dltD; D-alanine transfer protein
D LL3_03700 lytR; membrane-bound transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D LL3_03687 yvhJ; putative membrane bound transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D LL3_03719 ywtF; putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D LL3_02197 ugtP; UDP-glucose diacylglyceroltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D LL3_00747 yfnI; sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_00795 ltaS; lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_03460 yvgJ; sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_03461 yvgJ; sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D LL3_00881 csbB; putative glycosyl transferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D LL3_00882 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bql00543]
D LL3_03688 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D LL3_00096 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bql00730]
D LL3_00950 thiC; biosynthesis of the pyrimidine moiety from 5-aminoimidazole ribotide (AIR) (thiamin biosynthesis) K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D LL3_01252 thiD; 4-amino-5-hydroxymethyl-2-methylpyrimidine pyrophosphate kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D LL3_01251 thiF; adenylate transferase and sulfur transferase (thiamine biosynthesis) K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D LL3_02839 iscS; cysteine desulfurase involved in tRNA thiolation K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03037 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_02873 nifS; putative desulfurase involved in iron-sulfur clusters for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03036 thiI; persulfide ATP pyrophosphatase involved in thiamine biosynthesis and tRNA modification K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D LL3_01248 thiO; FAD-dependent glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D LL3_02622 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LL3_01250 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D LL3_01247 tenI; inhibitor of thiaminase TenA K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D LL3_03980 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LL3_03979 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D LL3_00564 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D LL3_01738 cpgA; GTPase involved in ribosome and sacculus morphogenesis K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LL3_01022 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LL3_01740 thiN; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D LL3_00137 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LL3_01246 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D LL3_01692 thiQ; N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase K20895 ylmB; formylaminopyrimidine deformylase [EC:3.5.1.-]
C 00740 Riboflavin metabolism [PATH:bql00740]
D LL3_02510 ribA; fused GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LL3_02512 ribD; fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LL3_03721 ywtE; putative hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D LL3_01192 yitU; putative phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D LL3_00387 ycsE; putative phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D LL3_02509 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LL3_02511 ribE; riboflavin synthase (alpha subunit) K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LL3_01827 ribC; bifunctional riboflavin kinase FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LL3_03957 nfrA; FMN-containing NADPH-linked nitro/flavin reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D LL3_00369 ycnD; NADPH-FMN oxidoreductase, delivers reduced FMN to enzymes that require the reduced cofactor for activity K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39]
D LL3_03980 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LL3_02547 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LL3_00333 bsdB; phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bql00750]
D LL3_03945 pdxK; pyridoxine, pyridoxal, and pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D LL3_01092 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LL3_03303 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LL3_00011 pdxS; pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D LL3_00012 pdxT; glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bql00760]
D LL3_02872 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LL3_02870 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D LL3_02871 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LL3_03245 pncB; putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D LL3_02533 pupG; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LL3_02141 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LL3_01000 yhcR; non specific extracellular endonuclease cleaving RNA and DNA K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LL3_03314 yunD; putative nuclease/nucleotidase/phosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LL3_00806 yfkN; extracellular 2'',3'' cyclic nucleotide phosphodiesterase, 2'' (or 3'') nucleotidase and 5'' nucleotidase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D LL3_02760 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D LL3_00295 nadE; ammonium-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D LL3_01045 srtN; protein deacetylase for the control of AcsA activity K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D LL3_01241 nadF; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LL3_03032 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LL3_00374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bql00770]
D LL3_02918 ilvB; acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_03742 alsS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LL3_02917 ilvH; acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LL3_02916 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LL3_02191 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LL3_02426 panB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LL3_01281 apbA; Ketopantoate reductase ApbA/PanE domain protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D LL3_01668 ylbQ; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D LL3_01548 panE; ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D LL3_02425 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LL3_02562 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D LL3_00072 coaX; Type III pantothenate kinase Pantothenic acid kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LL3_01730 coaB; Coenzyme A biosynthesis bifunctional protein CoaBC; phosphopantothenoylcysteine synthetase/decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LL3_01659 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LL3_02994 coaE; dephosphocoenzyme A kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LL3_00462 acpS; holo-acyl carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D LL3_00327 sfp; N-terminal part of 4''-phosphopantetheinyl transferase (Surfactin synthetase-activating enzyme) K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D LL3_00225 ybgE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_04003 ilvK; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_02424 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bql00780]
D LL3_01213 fabF; beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LL3_00533 beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LL3_03496 yvaG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01847 ymfI; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03020 ytkK; putative 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01751 fabG; beta-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03783 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LL3_01253 fabI; enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LL3_02009 bioI; cytochrome P450 for pimelic acid formation for biotin biosynthesis K16593 bioI; pimeloyl-[acyl-carrier protein] synthase [EC:1.14.14.46]
D LL3_02014 bioW; 6-carboxyhexanoate-CoA ligase (pimeloyl-CoA synthase) K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D LL3_02012 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LL3_02013 bioK; lysine-8-amino-7-oxononanoate aminotransferase K19563 bioA; lysine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.105]
D LL3_02011 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D LL3_02010 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D LL3_02427 birA; biotin acetyl-CoA-carboxylase ligase and biotin regulon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bql00785]
D LL3_02648 yqhM; putative lipoate protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LL3_03311 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LL3_03907 hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D LL3_01113 yhfJ; putative lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_01564 pdhA; pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LL3_01565 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LL3_00839 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_01566 pdhC; pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LL3_02109 odhA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LL3_02108 odhB; 2-oxoglutarate dehydrogenase complex (dihydrolipoamide transsuccinylase, E2 subunit) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LL3_02591 bkdA; branched-chain alpha-keto acid dehydrogenase E1 subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LL3_02590 bkdA; branched-chain alpha-keto acid dehydrogenase E1 subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LL3_02589 bkdB; branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LL3_02652 gcvP; glycine decarboxylase (subunit 1) (glycine cleavage system protein P) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LL3_02651 gcvP; glycine decarboxylase (subunit 2) (glycine cleavage system protein P) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LL3_02653 gcvT; aminomethyltransferase (glycine cleavage system protein T) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LL3_03400 yusH; putative glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bql00790]
D LL3_02463 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LL3_01022 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LL3_00247 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LL3_00080 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LL3_00081 folK; 7,8-dihydro-6-hydroxymethylpterinpyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LL3_00079 sul; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LL3_02186 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LL3_02232 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LL3_02893 folC; folyl-polyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LL3_02510 ribA; fused GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LL3_00077 pabA; 4-amino-4-deoxychorismate synthase; anthranilate synthase (subunit II) K25575 pabA; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component II [EC:2.6.1.123]
D LL3_00076 pabB; 4-amino-4-deoxychorismate synthase (para-aminobenzoate synthase) K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D LL3_00078 pabC; 4-amino-4-deoxychorismate pyruvate-lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D LL3_01477 queD; 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LL3_01478 queE; queuosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LL3_01476 ykvJ; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LL3_01479 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LL3_03817 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LL3_00570 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LL3_01535 moaE; molybdopterin synthase (large subunit) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LL3_03024 moaB; molybdopterin GTP-binding precursor Z biosynthesis component K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D LL3_01533 moeA; molybdene to molybdopterin ligation enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D LL3_04151 putative xanthine dehydrogenase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D LL3_01531 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bql00670]
D LL3_02186 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LL3_02232 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LL3_02626 folD; methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LL3_03838 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LL3_00693 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LL3_00694 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LL3_01733 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LL3_02653 gcvT; aminomethyltransferase (glycine cleavage system protein T) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LL3_01179 yitJ; homocysteine S-methyltransferase using (R,S)AdoMet and methylenetetrahydrofolate reductase [NAD(P)H] K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D LL3_02187 thyB; thymidylate synthase B K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LL3_02233 thyA; Thymidylate synthase 1 K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LL3_01410 ykkE; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D LL3_02686 yqgN; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bql00860]
D LL3_02903 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LL3_00942 gsaB; glutamate-1-semialdehyde aminotransferase, class III aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LL3_02898 hemL; glutamate-1-semialdehyde 2,1-aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LL3_02899 hemB; delta-aminolevulinic acid dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LL3_02901 hemC; porphobilinogen deaminase (hydroxymethylbilane synthase) K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LL3_02900 hemD; uroporphyrinogen III cosynthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LL3_01319 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LL3_01101 hemE; uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LL3_01068 hemZ; oxygen-independent coproporphyrinogen III oxidase, putative K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D LL3_02745 hemN; Oxygen-independent coproporphyrinogen-III oxidase 1 K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D LL3_01103 hemY; protoporphyrinogen IX and coproporphyrinogen III oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D LL3_01102 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LL3_03911 ywfI; putative oxidoreductase/oxygenase/dismutase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D LL3_00306 nasF; uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D LL3_01720 sumT; uroporphyrinogen III and precorrin-1 C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D LL3_01722 sirC; Precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D LL3_01721 sirB; sirohydrochlorin ferrochelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]
D LL3_00852 heme O synthase (minor enzyme) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_00853 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01643 ctaB; cytochrome caa3 oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01642 ctaA; heme-A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D LL3_03438 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D LL3_00735 yetG; putative monooxygenase K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bql00130]
D LL3_00333 bsdB; phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LL3_02460 menH; menaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LL3_03159 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D LL3_03268 dhbC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D LL3_03158 menD; 2-oxoglutarate decarboxylase and 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D LL3_03157 ytxM; putative esterase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D LL3_03154 menC; O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D LL3_03155 menE; O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D LL3_03156 menB; dihydroxynapthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D LL3_03236 yuxO; putative esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D LL3_03996 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D LL3_00855 Uncharacterized NAD(P)H oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LL3_00984 yhcB; trp repressor binding protein-like protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bql00900]
D LL3_02622 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LL3_01815 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D LL3_00092 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase IspD (YacM) K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D LL3_00048 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D LL3_00093 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D LL3_02702 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D LL3_02711 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Y K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_00333 bsdB; phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LL3_02471 seaA; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D LL3_02623 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LL3_02461 hepS; heptaprenyl diphosphate synthase component I K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D LL3_02459 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D LL3_01813 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:bql00906]
D LL3_01168 yisP; putative squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:bql00907]
D LL3_02020 yngG; putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LL3_03403 fadA; acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LL3_01961 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bql00523]
D LL3_03930 spsI; spore coat polysaccharide synthesis protein SpsI K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LL3_03929 spsJ; spore coat polysaccharide synthesis protein SpsJ K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LL3_03927 spsL; spore coat polysaccharide synthesis protein SpsL K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LL3_03928 spsK; spore coat polysaccharide synthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:bql01054]
D LL3_00321 srfA; non-ribosomal surfactin synthetase SrfAA K15654 srfAA; surfactin/lichenysin synthetase A
D LL3_00322 nonribosomal surfactin synthetase SrfAB K15655 srfAB; surfactin/lichenysin synthetase B
D LL3_00323 nonribosomal surfactin synthetase C K15656 srfAC; surfactin/lichenysin synthetase C
D LL3_02002 ituA; iturin A synthetase A K15661 ituA; iturin family lipopeptide synthetase A
D LL3_02001 ituB; iturin A synthetase B K15662 ituB; iturin family lipopeptide synthetase B
D LL3_02000 ituC; iturin A synthetase C K15663 ituC; iturin family lipopeptide synthetase C
D LL3_02028 fenD; nonribosomal fengycin synthesis K15667 ppsD; plipastatin/fengycin lipopeptide synthetase D
D LL3_02027 fenE; nonribosomal fengycin synthesis K15668 ppsE; plipastatin/fengycin lipopeptide synthetase E
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:bql01053]
D LL3_03159 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D LL3_03268 dhbC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D LL3_03266 dhbB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D LL3_03269 dhbA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D LL3_03267 dhbE; 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E) K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D LL3_03265 dhbF; siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase K04780 dhbF; glyine---[glycyl-carrier protein] ligase [EC:6.2.1.66]
C 01055 Biosynthesis of vancomycin group antibiotics
D LL3_03929 spsJ; spore coat polysaccharide synthesis protein SpsJ K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:bql00311]
D LL3_00299 cah; S-deacylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D LL3_04025 yxeI; putative hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D LL3_01297 penP; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:bql00332]
D LL3_02046 proJ; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LL3_01411 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LL3_01412 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bql00261]
D LL3_03264 Uncharacterized protein ybdZ K05375 mbtH; MbtH protein
D LL3_01718 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D LL3_00361 yclM; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01835 dapG; aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_02935 lysC; aspartokinase II alpha subunit / beta subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LL3_01834 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LL3_01836 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LL3_02432 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bql00521]
D LL3_02682 glcK; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D LL3_01012 pgcA; alpha-phosphoglucomutase, required for UDP-glucose synthesis K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D LL3_01576 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LL3_00158 yktc; putative inorganic polyphosphate/ATP-NAD kinase Poly(P)/ATP NAD kinase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LL3_04105 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D LL3_03930 spsI; spore coat polysaccharide synthesis protein SpsI K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LL3_03929 spsJ; spore coat polysaccharide synthesis protein SpsJ K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LL3_03927 spsL; spore coat polysaccharide synthesis protein SpsL K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LL3_03928 spsK; spore coat polysaccharide synthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D LL3_02682 glcK; glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:bql00525]
D LL3_03930 spsI; spore coat polysaccharide synthesis protein SpsI K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LL3_03929 spsJ; spore coat polysaccharide synthesis protein SpsJ K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bql00401]
D LL3_02446 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_02447 hisC; histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LL3_02453 trpE; anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LL3_02003 ituD; malonyl-CoA transacylase ItuD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LL3_01750 fabD; malonyl CoA:acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LL3_03496 yvaG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01847 ymfI; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03020 ytkK; putative 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01751 fabG; beta-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01253 fabI; enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:bql00998]
D LL3_01752 acpA; Acyl carrier protein K02078 acpP; acyl carrier protein
D LL3_03918 bacA; Bacilysin biosynthesis protein BacA K19546 bacA; prephenate decarboxylase [EC:4.1.1.100]
D LL3_03917 bacB; Bacilysin biosynthesis protein BacB K19547 bacB; 3-[(4R)-4-hydroxycyclohexa-1,5-dien-1-yl]-2-oxopropanoate isomerase [EC:5.3.3.19]
D LL3_03912 ywfH; carrier protein reductase of bacilysin synthesis K19550 bacG; bacilysin biosynthesis oxidoreductase BacG [EC:1.3.1.-]
D LL3_03913 bacF; putative aspartate aminotransferase (transaminase A) YwfG K19549 bacF; bacilysin biosynthesis transaminase BacF [EC:2.6.1.-]
D LL3_03916 bacC; bacilysin biosynthesis oxidoreductase K19548 bacC; dihydroanticapsin dehydrogenase [EC:1.1.1.385]
D LL3_03915 bacD; Alanine-anticapsin ligase BacD K13037 bacD; L-alanine-L-anticapsin ligase [EC:6.3.2.49]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bql00999]
D LL3_03134 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LL3_02762 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bql00362]
D LL3_03403 fadA; acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LL3_00850 Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LL3_03891 ywhB; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D LL3_03404 fadN; 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA) K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LL3_02941 fadB; putative enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D LL3_02602 mmgB; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:bql00627]
D LL3_00787 yflL; putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LL3_00334 bsdC; phenolic acid decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D LL3_00335 Phenolic acid decarboxylase subunit D K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D LL3_00333 bsdB; phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LL3_00756 yfmT; putative aldehyde dehydrogenase K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67]
D LL3_02155 yodS; putative aminoacyloate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D LL3_02154 yodR; putative acyloate-acetoacetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D LL3_02800 yrhJ; putative bifunctional P-450/NADPH-P450 reductase 2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D LL3_00745 yetO; putative cytochrome P450 CYP102A2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bql00625]
D LL3_01930 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_02102 dhaS; aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_04121 aldX; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LL3_00540 Abhydrolase domain-containing protein 7 Epoxide hydrolase protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D LL3_00194 yfnB; putative hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:bql00361]
D LL3_00850 Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LL3_00194 yfnB; putative hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D LL3_00540 Abhydrolase domain-containing protein 7 Epoxide hydrolase protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:bql00622]
D LL3_00850 Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LL3_03891 ywhB; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D LL3_03403 fadA; acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
D LL3_00850 Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D LL3_03810 ureC; urease (alpha subunit) K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D LL3_03811 ureB; urease (beta subunit) K01429 ureB; urease subunit beta [EC:3.5.1.5]
D LL3_03812 ureA; urease (gamma subunit) K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D LL3_03891 ywhB; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:bql00626]
D LL3_01930 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LL3_00311 putative glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LL3_00523 adhB; putative oxidoreductase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bql03020]
D LL3_00110 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LL3_00111 rpoC; RNA polymerase (beta'' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LL3_00141 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LL3_01729 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LL3_03864 rpoE; RNA polymerase (delta subunit) K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bql03010]
D LL3_02472 ypfD; RNA degradation presenting factor K02945 RP-S1; small subunit ribosomal protein S1
D LL3_01809 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LL3_00123 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LL3_03046 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LL3_00133 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LL3_04236 rpsF; ribosomal protein S6 (BS9) K02990 RP-S6; small subunit ribosomal protein S6
D LL3_00113 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LL3_00130 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LL3_00140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LL3_00967 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LL3_00129 rpsN; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D LL3_01758 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LL3_00126 rpsQ; ribosomal protein S17 (BS16) K02961 RP-S17; small subunit ribosomal protein S17
D LL3_00122 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LL3_02750 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LL3_02736 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LL3_00106 rplA; ribosomal protein L1 (BL1) K02863 RP-L1; large subunit ribosomal protein L1
D LL3_00121 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LL3_00118 rplC; ribosomal protein L3 (BL3) K02906 RP-L3; large subunit ribosomal protein L3
D LL3_00119 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LL3_00128 rplE; ribosomal protein L5 (BL6) K02931 RP-L5; large subunit ribosomal protein L5
D LL3_00131 rplF; ribosomal protein L6 (BL8) K02933 RP-L6; large subunit ribosomal protein L6
D LL3_00108 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LL3_04200 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LL3_00107 rplJ; ribosomal protein L10 (BL5) K02864 RP-L10; large subunit ribosomal protein L10
D LL3_00105 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LL3_00146 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LL3_00135 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LL3_02974 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LL3_02881 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LL3_00120 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LL3_00127 rplX; ribosomal protein L24 (BL23) K02895 RP-L24; large subunit ribosomal protein L24
D LL3_00054 ctc; 50S ribosomal protein L25 General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D LL3_02879 rpmA; ribosomal protein L27 (BL24) K02899 RP-L27; large subunit ribosomal protein L27
D LL3_01742 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LL3_00125 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LL3_00134 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LL3_03149 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LL3_03855 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LL3_01665 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LL3_00102 rpmG; 50S ribosomal protein L33 3 K02913 RP-L33; large subunit ribosomal protein L33
D LL3_02572 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LL3_00139 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LL3_00112 alternative ribosomal protein L7A K07590 RP-L7A; large subunit ribosomal protein L7A
D LL3_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bql00970]
D LL3_t0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0057 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0048 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0047 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0024 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LL3_t0067 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LL3_t0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LL3_t0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0029 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LL3_t0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0016 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0007 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0026 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0069 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0065 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0034 tRNA-His K14226 tRNA-His; tRNA His
D LL3_t0064 tRNA-His K14226 tRNA-His; tRNA His
D LL3_t0001 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LL3_t0004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LL3_t0066 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LL3_t0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0017 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LL3_t0051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LL3_t0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LL3_t0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0061 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0006 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0058 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0059 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0030 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LL3_t0063 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LL3_t0046 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LL3_t0056 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LL3_t0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0068 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0050 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LL3_t0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LL3_t0010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LL3_t0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LL3_t0032 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LL3_t0011 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LL3_t0041 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_t0009 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_t0027 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_t0049 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_00094 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D LL3_00712 gatA; glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LL3_00713 gatB; glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LL3_00711 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LL3_02827 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LL3_02844 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LL3_02417 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LL3_02721 glyQ; glycyl-tRNA synthetase (alpha subunit) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LL3_02720 glyS; glycyl-tRNA synthetase (beta subunit) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LL3_02982 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LL3_00013 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LL3_00097 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LL3_00040 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LL3_01733 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LL3_02894 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LL3_03107 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LL3_01700 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LL3_00084 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LL3_03879 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LL3_01817 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LL3_02845 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LL3_02953 pheS; phenylalanyl-tRNA synthetase (alpha subunit) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LL3_02952 pheT; phenylalanyl-tRNA synthetase (beta subunit) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LL3_03057 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LL3_01221 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bql03060]
D LL3_00136 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D LL3_00103 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LL3_03501 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D LL3_02855 secD; protein-export membrane protein K12257 secDF; SecD/SecF fusion protein
D LL3_02860 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D LL3_02578 oxaA; Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_04250 spoI; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_03665 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LL3_01757 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LL3_01755 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D LL3_00248 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D LL3_00572 tatA; Sec-independent protein translocase protein tatAy K03116 tatA; sec-independent protein translocase protein TatA
D LL3_00249 tatC; component of the twin-arginine pre-protein translocation pathway K03118 tatC; sec-independent protein translocase protein TatC
D LL3_00573 tatC; component of the twin-arginine pre-protein translocation pathway K03118 tatC; sec-independent protein translocase protein TatC
D LL3_02515 sipS; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LL3_01138 sipV; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LL3_01545 sipT; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LL3_01702 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LL3_02660 sipW; Signal peptidase type I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bql04122]
D LL3_02839 iscS; cysteine desulfurase involved in tRNA thiolation K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03037 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_02873 nifS; putative desulfurase involved in iron-sulfur clusters for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_02838 trmU; tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LL3_01535 moaE; molybdopterin synthase (large subunit) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LL3_03817 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LL3_01536 moaD; molybdopterin synthase (small subunit) K03636 moaD; sulfur-carrier protein
D LL3_01532 moeB; molybdopterin biosynthesis adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D LL3_00570 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LL3_03024 moaB; molybdopterin GTP-binding precursor Z biosynthesis component K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D LL3_03036 thiI; persulfide ATP pyrophosphatase involved in thiamine biosynthesis and tRNA modification K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D LL3_01249 thiS; Sulfur carrier for synthesis of hydroxyethylthiazole phosphate K03154 thiS; sulfur carrier protein
D LL3_01251 thiF; adenylate transferase and sulfur transferase (thiamine biosynthesis) K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bql03018]
D LL3_03536 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LL3_01828 pnpA; polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LL3_03499 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LL3_04057 hbs3; non-specific DNA-binding protein Hbsu K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LL3_00458 cshA; DEAD-box ATP-dependent RNA helicase ydbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LL3_02486 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LL3_02090 yocI; putative ATP-dependent nucleic acid helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LL3_03856 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LL3_01855 ymdA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D LL3_01837 rnjB; ribonuclease J2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LL3_01557 rnjA; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_02742 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK
D LL3_00577 groEL; class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LL3_01894 ymaH; Protein hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bql03030]
D LL3_02268 yorL; putative DNA polymerase yorL K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_03012 dnaE; DNA polymerase III (alpha subunit) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_01818 polC; DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D LL3_00021 dnaX; DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LL3_00033 holB; DNA polymerase III delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LL3_02751 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LL3_00002 dnaN; DNA polymerase III (beta subunit) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LL3_00899 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LL3_04189 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LL3_02716 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LL3_03779 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04235 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_02202 ypeP; putative ribonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LL3_02204 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LL3_02328 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LL3_01765 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LL3_02951 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D LL3_02997 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LL3_00706 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bql03410]
D LL3_02415 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LL3_03942 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LL3_00933 yfhQ; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LL3_04010 aag; putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LL3_02996 mutM; formamidopyrimidine-DNA glycosidase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LL3_00826 yfjP; putative DNA-modified purine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LL3_04231 apurinic/apyrimidinic endonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LL3_02708 nvfO; type IV apurinic/apyrimidinic endonuclease K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D LL3_02997 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LL3_02852 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_02269 yorK; Putative SPBc2 prophage-derived single-strand DNA-specific exonuclease yorK K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_00706 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bql03420]
D LL3_00057 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LL3_03648 uvrA; excinuclease ABC (subunit A) K03701 uvrA; excinuclease ABC subunit A
D LL3_03649 uvrB; excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B
D LL3_02936 uvrC; excinuclease ABC (subunit C) K03703 uvrC; excinuclease ABC subunit C
D LL3_03475 helD; DNA 3'-5' helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_01266 yjcD; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_00705 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_02330 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_02997 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LL3_00706 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bql03430]
D LL3_01863 mutS; DNA mismatch repair recognition factor K03555 mutS; DNA mismatch repair protein MutS
D LL3_02947 mutS; putative DNA mismatch repair enzyme K07456 mutS2; DNA mismatch repair protein MutS2
D LL3_01864 mutL; DNA mismatch repair factor K03572 mutL; DNA mismatch repair protein MutL
D LL3_03475 helD; DNA 3'-5' helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_01266 yjcD; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_00705 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_02330 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_02625 xseA; exodeoxyribonuclease VII (large subunit) K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LL3_02624 xseB; exodeoxyribonuclease VII (small subunit) K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LL3_02852 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_02269 yorK; Putative SPBc2 prophage-derived single-strand DNA-specific exonuclease yorK K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_03779 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04235 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_02268 yorL; putative DNA polymerase yorL K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_03012 dnaE; DNA polymerase III (alpha subunit) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_01818 polC; DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D LL3_00002 dnaN; DNA polymerase III (beta subunit) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LL3_00021 dnaX; DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LL3_02751 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LL3_00033 holB; DNA polymerase III delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LL3_00706 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bql03440]
D LL3_02852 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_02269 yorK; Putative SPBc2 prophage-derived single-strand DNA-specific exonuclease yorK K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_03779 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04235 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_00004 recF; DNA repair and genetic recombination factor K03629 recF; DNA replication and repair protein RecF
D LL3_02722 recO; DNA double strand break repair and recombination factor K03584 recO; DNA repair protein RecO (recombination protein O)
D LL3_00023 recR; Recombination protein recR K06187 recR; recombination protein RecR
D LL3_01853 recA; Protein recA K03553 recA; recombination protein RecA
D LL3_02997 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LL3_02865 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D LL3_02864 ruvB; Holliday junction DNA helicase, ATP-dependent component K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LL3_01747 recG; branch migrating ATP-dependent DNA helicase involved in DNA recombination and repair K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LL3_02836 yrrC; putative exonuclease with DNA/RNA helicase motif K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LL3_02268 yorL; putative DNA polymerase yorL K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_03012 dnaE; DNA polymerase III (alpha subunit) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_01818 polC; DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D LL3_00002 dnaN; DNA polymerase III (beta subunit) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LL3_00021 dnaX; DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LL3_02751 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LL3_00033 holB; DNA polymerase III delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LL3_01731 priA; primosomal replication factor Y (primosomal protein N'') K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:bql03450]
D LL3_01441 ykoV; ATP-dependent DNA ligase subunit K10979 ku; DNA end-binding protein Ku
D LL3_01440 ykoU; ATP-dependent DNA ligase subunit K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bql02010]
D LL3_00963 ssuA; aliphatic sulfonate ABC transporter (binding lipoprotein) K15553 ssuA; sulfonate transport system substrate-binding protein
D LL3_00964 ssuC; aliphatic sulfonate ABC transporter (permease) K15554 ssuC; sulfonate transport system permease protein
D LL3_00962 ssuB; aliphatic sulfonate ABC transporter (ATP-binding protein) K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LL3_03463 yvgL; putative molybdate-binding lipoprotein K02020 modA; molybdate transport system substrate-binding protein
D LL3_03464 yvgM; putative sulfate transport system permease protein cysT K02018 modB; molybdate transport system permease protein
D LL3_00283 opuA; glycine betaine ABC transporter (binding protein) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D LL3_00282 opuA; Glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D LL3_00281 opuA; glycine betaine ABC transporter (ATP-binding protein) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D LL3_03512 opuB; choline ABC transporter (binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D LL3_03517 opuC; Glycine betaine/carnitine/choline-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D LL3_03511 opuB; osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03516 opuC; glycine betaine/carnitine/choline ABC transporter OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03518 opuC; Glycine betaine/carnitine/choline transport system permease protein opuCB K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03513 opuC; Glycine betaine/carnitine/choline transport system permease protein opuCD K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03519 opuC; glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LL3_03514 opuB; Glycine betaine/carnitine/choline transport ATP-binding protein opuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LL3_03327 yurJ; putative multiple sugar ABC transporter (ATP-binding protein) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LL3_04034 msmX; multiple sugar-binding transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LL3_03101 msmE; multiple sugar-binding lipoprotein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LL3_03332 frlO; multiple sugar transport system substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LL3_03331 frlN; multiple sugar transport system permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LL3_03102 amyD; carbohydrate ABC transporter (permease) K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LL3_03330 frlM; multiple sugar transport system permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LL3_03103 amyC; maltose and multiple sugars ABC transporter (permease) K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LL3_02964 araN; sugar-binding lipoprotein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D LL3_02963 araP; arabinose/arabinan permease K17235 araP; arabinooligosaccharide transport system permease protein
D LL3_02962 araQ; arabinose/arabinan permease K17236 araQ; arabinooligosaccharide transport system permease protein
D LL3_01183 Uncharacterized lipoprotein yufN K07335 bmpA; basic membrane protein A and related proteins
D LL3_03223 yufN; putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D LL3_03226 yufP; putative permease of ABC transporter K23535 nupB; general nucleoside transport system permease protein
D LL3_03227 yufQ; putative permease of ABC transporter K23536 nupC; general nucleoside transport system permease protein
D LL3_03225 yufO; putative carbohydrate ABC transporter (ATP-binding protein) K23537 nupA; general nucleoside transport system ATP-binding protein
D LL3_03738 rbsB; ribose ABC transporter (ribose-binding lipoprotein) K10439 rbsB; ribose transport system substrate-binding protein
D LL3_03737 rbsC; ribose ABC transporter (permease) K10440 rbsC; ribose transport system permease protein
D LL3_03736 rbsA; ribose ABC transporter (ATP-binding protein) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D LL3_03735 rbsD; ribose ABC transporter (membrane bound ribose binding) K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D LL3_02695 pstS; phosphate ABC transporter (binding lipoprotein) K02040 pstS; phosphate transport system substrate-binding protein
D LL3_02694 pstC; phosphate ABC transporter (permease) K02037 pstC; phosphate transport system permease protein
D LL3_02693 pstA; phosphate ABC transporter (permease) K02038 pstA; phosphate transport system permease protein
D LL3_02691 pstB; phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LL3_02692 pstB; phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LL3_02830 glnH; glutamine ABC transporter (glutamine-binding lipoprotein) K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D LL3_02832 glnP; glutamine ABC transporter (permease) K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D LL3_02831 glnM; putative glutamine transport system permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D LL3_02829 glnQ; glutamine ABC transporter (ATP-binding protein) K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_00331 yckK; polar amino acid transport system substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LL3_00330 tcyB; cystine ABC transporter (permease), membrane protein K10009 tcyB; L-cystine transport system permease protein
D LL3_00329 tcyC; cystine ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_03493 tcyJ; cystine ABC transporter (binding protein) K16956 tcyJ; L-cystine transport system substrate-binding protein
D LL3_03491 ytmL; polar amino acid transport system permease protein K16958 tcyL; L-cystine transport system permease protein
D LL3_03490 tcyM; L-cystine transport system permease protein TcyM K16959 tcyM; L-cystine transport system permease protein
D LL3_03489 tcyN; cystine ABC transporter (ATP-binding protein) K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_00346 yxeM; amino acid ABC transporter (binding protein)-like protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D LL3_00348 yxeO; amino acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D LL3_02586 artP; high affinity arginine ABC transporter (ATP-binding protein) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D LL3_02585 artQ; high affinity arginine ABC transporter (permease) K17077 artQ; arginine/lysine/histidine transport system permease protein
D LL3_02584 artM; high affinity arginine ABC transporter (ATP-binding protein) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_00992 yhcJ; putative ABC transporter (binding lipoprotein) K02073 metQ; D-methionine transport system substrate-binding protein
D LL3_03392 metN; methionine ABC transporter (binding lipoprotein) K02073 metQ; D-methionine transport system substrate-binding protein
D LL3_03393 metP; methionine ABC transporter, permease K02072 metI; D-methionine transport system permease protein
D LL3_03394 metQ; methionine ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D LL3_01222 oppA; oligopeptide ABC transporter (binding lipoprotein) K15580 oppA; oligopeptide transport system substrate-binding protein
D LL3_01223 oppB; oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D LL3_01224 oppC; oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D LL3_01225 oppD; oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D LL3_01226 oppF; oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D LL3_01398 dppE; dipeptide ABC transporter (dipeptide-binding lipoprotein) K16199 dppE; dipeptide transport system substrate-binding protein
D LL3_01395 dppB; dipeptide ABC transporter (permease) K16200 dppB1; dipeptide transport system permease protein
D LL3_01396 dppC; dipeptide ABC transporter (permease) K16201 dppC; dipeptide transport system permease protein
D LL3_01397 dppD; dipeptide ABC transporter (ATP-binding protein) K16202 dppD; dipeptide transport system ATP-binding protein
D LL3_00269 ycdH; zinc transport in via ABC system K09815 znuA; zinc transport system substrate-binding protein
D LL3_00271 yceA; zinc ABC transporter (permease) K09816 znuB; zinc transport system permease protein
D LL3_00270 ycdI; zinc transport in via ABC system K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LL3_03272 bioY; putative biotin transporter K03523 bioY; biotin transport system substrate-specific component
D LL3_01123 bioY; putative biotin transporter bioY K03523 bioY; biotin transport system substrate-specific component
D LL3_00144 ybaF; putative permease K16785 ecfT; energy-coupling factor transport system permease protein
D LL3_01426 thiX; thiamine ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein
D LL3_00142 ybxA; ABC efflux transporter (ATP-binding protein) K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D LL3_00143 ybaE; ABC efflux transporter (ATP-binding protein) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D LL3_00720 yfiN; putative transport permease yfiN K11051 cylB; multidrug/hemolysin transport system permease protein
D LL3_00719 metN; Methionine import ATP-binding protein metN K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D LL3_03705 tagG; teichoic acid precursors permease K09692 tagG; teichoic acid transport system permease protein
D LL3_03704 tagH; ATP-binding teichoic acid precursor transporter component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D LL3_03113 bceB; ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D LL3_03114 bceA; bacitracin ABC efflux transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D LL3_03509 spaE; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D LL3_03508 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
D LL3_03510 spaF; antibiotic transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D LL3_03660 hypothetical protein K09811 ftsX; cell division transport system permease protein
D LL3_03661 ftsE; cell-division ABC transporter (ATP-binding protein) K09812 ftsE; cell division transport system ATP-binding protein
D LL3_03117 ytrF; metabolite permease K16918 ytrF; acetoin utilization transport system permease protein
D LL3_03119 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D LL3_03120 ABC transporter, permease component K16919 ytrC_D; acetoin utilization transport system permease protein
D LL3_03121 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D LL3_03122 ytrB; ABC transporter (ATP-binding protein) K16921 ytrB; acetoin utilization transport system ATP-binding protein
D LL3_03118 ytrE; ABC transporter (ATP-binding protein) K16920 ytrE; acetoin utilization transport system ATP-binding protein
D LL3_01054 yheI; ABC transporter (ATP-binding protein), also involved in the signaling pathway to activate KinA at the onset of sporulation-like protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_01055 yheH; ABC transporter (ATP-binding protein) involved in the signaling pathway that activates KinA during sporulation initiation K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_00829 yvcC; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_03624 bmrA; efflux transporter (ATP-binding and permease protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_00847 malQ; maltose and maltodextrin ABC transporter subunit (ATP-binding protein) K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_00848 yfiC; putative ABC transporter (ATP-binding protein) K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_04028 cydD; ABC membrane transporter (ATP-binding protein) required for cytochrome bd function K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D LL3_04029 cydC; ABC membrane transporter (ATP-binding protein) required for cytochrome bd function K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D LL3_00528 vmlR; antibiotic efflux ATP-binding transport protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:bql02060]
D LL3_01495 ptsI; phosphotransferase system (PTS) enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LL3_01494 phos; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D LL3_01493 ptsG; phosphotransferase system (PTS) glucose-specific enzyme IICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D LL3_02404 ypqE; putative phosphotransferase system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LL3_00793 nagP; phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D LL3_03948 sacP; phosphotransferase system (PTS) sucrose-specific enzyme IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D LL3_00171 murP; N-acetyl muramic acid-specific phosphotransferase system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D LL3_04072 bglP; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D LL3_00845 malP; PTS system, maltose-specific enzyme IIBC component, putative K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D LL3_00800 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D LL3_02791 manP; PTS system, mannose-specific IIA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D LL3_00383 mtlA; PTS system, mannitol specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D LL3_00382 mtlA; PTS system, mannitol-specific enzyme II, BC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D LL3_01304 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D LL3_01303 lacE; PTS system, lactose-specific IIB component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D LL3_04005 licA; lichenan-specific phosphotransferase system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D LL3_04018 gmuA; glucomannan-specific phosphotransferase system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D LL3_04007 licB; trigger enzyme: lichenan-specific phosphotransferase system, EIIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D LL3_04017 ydhM; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D LL3_03990 ywbA; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D LL3_04006 licC; lichenan-specific phosphotransferase system, EIIC component K02761 celB; cellobiose PTS system EIIC component
D LL3_04019 gmuC; oligo-alpha-mannoside phosphotransferase system enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D LL3_01544 fruA; phosphotransferase system (PTS) fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LL3_01543 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:bql03070]
D LL3_02855 secD; protein-export membrane protein K12257 secDF; SecD/SecF fusion protein
D LL3_00103 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LL3_03501 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D LL3_00136 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D LL3_02860 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D LL3_02578 oxaA; Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_04250 spoI; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_03665 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LL3_01755 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D LL3_01757 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LL3_00248 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D LL3_00572 tatA; Sec-independent protein translocase protein tatAy K03116 tatA; sec-independent protein translocase protein TatA
D LL3_00249 tatC; component of the twin-arginine pre-protein translocation pathway K03118 tatC; sec-independent protein translocase protein TatC
D LL3_00573 tatC; component of the twin-arginine pre-protein translocation pathway K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bql02020]
D LL3_02998 phoR; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LL3_03622 Alkaline phosphatase synthesis sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LL3_02999 phoP; two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D LL3_01022 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LL3_00247 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LL3_02695 pstS; phosphate ABC transporter (binding lipoprotein) K02040 pstS; phosphate transport system substrate-binding protein
D LL3_03423 cssS; two-component sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D LL3_03422 cssR; two-component response regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D LL3_01392 htrA; membrane bound serine protease Do, quality control protease (heat-shock protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_03420 htrB; putative serine protease YvtA K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_03671 hag; flagellin protein K02406 fliC; flagellin
D LL3_01807 sigD; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LL3_03063 motP; motility protein (flagellar motor rotation) K02556 motA; chemotaxis protein MotA
D LL3_01470 motA; motility protein A; MotA component of the stator flagellum complex K02556 motA; chemotaxis protein MotA
D LL3_02495 resE; two-component sensor histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D LL3_02496 resD; Transcriptional regulatory protein resD K07775 resD; two-component system, OmpR family, response regulator ResD
D LL3_01642 ctaA; heme-A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D LL3_04182 walK; sensory box histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D LL3_04183 walR; Transcriptional regulatory protein yycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D LL3_01996 yvrH; Transcriptional regulatory protein yvrH K07668 vicR; two-component system, OmpR family, response regulator VicR
D LL3_04208 hypothetical protein K00692 sacB; levansucrase [EC:2.4.1.10]
D LL3_00001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LL3_03115 bceS; two-component sensor histidine kinase controlling resistance to antibiotics affecting the envelope K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D LL3_03116 bceR; two-component response regulator controlling resistance to antibiotics affecting the envelope K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D LL3_03114 bceA; bacitracin ABC efflux transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D LL3_03113 bceB; ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D LL3_03999 dltA; D-alanine:D-alanyl-carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D LL3_04000 dltB; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D LL3_04001 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D LL3_04002 dltD; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid synthesis K03740 dltD; D-alanine transfer protein
D LL3_00862 mprF; lysylphosphatidylglycerol synthase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D LL3_04100 yxdK; two-component sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D LL3_04101 yxdJ; two-component response regulator YxdJ K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D LL3_04099 yxdL; ABC transporter (ATP-binding protein); efflux of cationic peptides K11635 yxdL; putative ABC transport system ATP-binding protein
D LL3_04098 yxdM; ABC transporter (permease); efflux of cationic peptides K11636 yxdM; putative ABC transport system permease protein
D LL3_02140 yodJ; D-alanyl-D-alanine carboxypeptidase lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LL3_03506 spaK; lantibiotic biosynthesis sensor histidine kinase, putative K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D LL3_03507 spaR; two-component response regulator SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D LL3_00828 bsaP; subtilisin-type proteinase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D LL3_03510 spaF; antibiotic transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D LL3_03509 spaE; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D LL3_03508 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
D LL3_01502 kinA; sporulation-specific ATP-dependent protein histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D LL3_03214 kinB; two-component sensor histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D LL3_03215 kapB; factor required for KinB signal transduction and activation of the phosphorelay to sporulation K06347 kapB; kinase-associated protein B
D LL3_01553 kinC; two-component sensor histidine kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D LL3_01466 kinD; histidine kinase phosphorylating Spo0A K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D LL3_01454 kinE; two-component sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D LL3_03861 stage 0 sporulation protein F K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D LL3_02878 sporulation initiation phosphotransferase K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D LL3_02617 response regulator K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D LL3_00781 citS; two-component sensor histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D LL3_00782 citT; two-component response regulator K11638 K11638; two-component system, CitB family, response regulator CitT
D LL3_00784 citM; transporter of divalent metal ions/citrate complexes K11639 citM; Mg2+/citrate complex secondary transporter
D LL3_00443 dctS; sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D LL3_00444 dctR; putative C4-dicarboxylate response regulator dctR K11692 K11692; two-component system, CitB family, response regulator DctR
D LL3_03221 malK; sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D LL3_03222 two-component response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D LL3_03011 ytsJ; NADP-dependent malic enzyme (conversion of malate into pyruvate) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_03853 maeA; putative NAD-dependent malate dehydrogenase II (NAD-ME II) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_02541 mleA; NAD-dependent malic enzyme (conversion of malate into pyruvate) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_03079 malS; putative NAD-dependent malic enzyme 3 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LL3_04032 cimH; transporter for citrate and malate (proton symport) K11616 maeN; malate:Na+ symporter
D LL3_02979 lytS; two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D LL3_02978 lytT; two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D LL3_02977 lrgA; murein hydrolase regulator LrgA K05338 lrgA; holin-like protein
D LL3_02976 lrgB; antiholin-like protein K05339 lrgB; holin-like protein LrgB
D LL3_03874 narG; nitrate reductase (alpha subunit) K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03873 narH; nitrate reductase (beta subunit) K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03871 narI; nitrate reductase (gamma subunit) K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03872 narJ; nitrate reductase (protein J) K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D LL3_03672 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator
D LL3_03239 comX; Competence pheromone Flags: Precursor K02253 comX; competence protein ComX
D LL3_03238 comP; two-component sensor histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D LL3_03237 comA; two-component response regulator K07691 comA; two-component system, NarL family, competent response regulator ComA
D LL3_03685 degS; two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D LL3_03684 degU; Transcriptional regulatory protein degU K07692 degU; two-component system, NarL family, response regulator DegU
D LL3_04118 desK; two-component sensor kinase (NarL family) DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LL3_04117 desR; two-component response regulator DesR K07693 desR; two-component system, NarL family, response regulator DesR
D LL3_04119 des; fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D LL3_03432 liaS; sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D LL3_03431 liaR; Transcriptional regulatory protein liaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D LL3_03436 liaI; Protein LiaI K11619 liaI; lia operon protein LiaI
D LL3_03435 liaH; Laminin subunit gamma-2 Laminin 5 gamma 2 subunit K11620 liaH; lia operon protein LiaH
D LL3_03434 liaG; Protein LiaG K11621 liaG; lia operon protein LiaG
D LL3_03433 liaF; Protein LiaF K11622 liaF; lia operon protein LiaF
D LL3_03796 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D LL3_01907 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LL3_02183 yplP; transcriptional enhancer K07714 atoC; two-component system, NtrC family, response regulator AtoC
D LL3_02155 yodS; putative aminoacyloate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D LL3_02154 yodR; putative acyloate-acetoacetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_00445 dctP; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D LL3_03562 sigL; RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D LL3_02457 cheR; methyl-accepting chemotaxis proteins (MCPs) methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LL3_03186 tlpB; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03187 mcpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03188 tlpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03189 mcpB; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_01498 mcpC; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_01804 cheW; modulation of CheA activity in response to attractants (chemotaxis) K03408 cheW; purine-binding chemotaxis protein CheW
D LL3_01803 cheA; chemotactic two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LL3_01793 cheY; regulator of chemotaxis and motility K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01966 ccdB; two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01802 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LL3_01506 cheV; coupling protein and response regulator for CheA activity in response to attractants (chemotaxis) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D LL3_00231 glnK; two-component sensor kinase, regulation of the glsA-glnT operon K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D LL3_00232 glnL; two-component response regulator, regulation of the glsA-glnT operon K07719 glnL; two-component system, response regulator GlnL
D LL3_00229 ybgJ; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_01638 glsB; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LL3_00228 glnT; glutamine transporter (proton symport) K11626 glnT; putative sodium/glutamine symporter
D LL3_03150 ythA; putative cytochrome d oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LL3_04031 cydA; cytochrome bd ubiquinol oxidase (subunit I) K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LL3_03151 ythB; putative cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LL3_04030 cydB; cytochrome bd ubiquinol oxidase (subunit II) K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LL3_00813 yfkJ; protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LL3_03701 mnaA; UDP-N-acetylmannosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LL3_03678 flgM; anti-sigma factor repressor of sigma(D)-dependent transcription K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D LL3_04167 argI; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bql02024]
D LL3_03146 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D LL3_01894 ymaH; Protein hfq K03666 hfq; host factor-I protein
D LL3_02453 trpE; anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LL3_00769 pel; pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D LL3_01115 lcfB; long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_02943 lcfA; long chain acyl-CoA ligase (degradative) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_04023 gmuG; Beta-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D LL3_02512 ribD; fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LL3_01222 oppA; oligopeptide ABC transporter (binding lipoprotein) K15580 oppA; oligopeptide transport system substrate-binding protein
D LL3_01223 oppB; oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D LL3_01224 oppC; oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D LL3_01225 oppD; oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D LL3_01226 oppF; oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D LL3_01217 appA; oligopeptide ABC transporter (oligopeptide-binding lipoprotein); C-terminal part of AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LL3_00954 Periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LL3_01218 appB; oligopeptide ABC transporter (permease) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LL3_00955 Glutathione transport system permease protein gsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LL3_01219 appC; oligopeptide ABC transporter (permease) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LL3_00956 Oligopeptide transport system permease protein oppC Stage 0 sporulation protein KC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LL3_00957 Phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LL3_01215 appD; oligopeptide ABC transporter (ATP-binding protein) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LL3_01216 appF; oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D LL3_01402 ykfD; putative cell wall oligopeptide ABC transporter (ATP binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D LL3_02578 oxaA; Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_04250 spoI; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_00873 mpr; Extracellular metalloprotease K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D LL3_03239 comX; Competence pheromone Flags: Precursor K02253 comX; competence protein ComX
D LL3_03240 comQ; isoprenyl transferase (pre-ComX modification) K02251 comQ; competence protein ComQ
D LL3_03238 comP; two-component sensor histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D LL3_03237 comA; two-component response regulator K07691 comA; two-component system, NarL family, competent response regulator ComA
D LL3_01128 comK; competence transcription factor (CTF) K02250 comK; competence protein ComK
D LL3_00321 srfA; non-ribosomal surfactin synthetase SrfAA K15654 srfAA; surfactin/lichenysin synthetase A
D LL3_00322 nonribosomal surfactin synthetase SrfAB K15655 srfAB; surfactin/lichenysin synthetase B
D LL3_00323 nonribosomal surfactin synthetase C K15656 srfAC; surfactin/lichenysin synthetase C
D LL3_00324 nonribosomal surfactin synthetase D K15657 srfATE; external thioesterase TEII
D LL3_00358 phrC; inhibitory peptide of RapC K06353 phrC; phosphatase RapC regulator
D LL3_03884 phrF; phosphatase RapF regulator K06355 phrF; phosphatase RapF regulator
D LL3_01338 phrA; Phosphatase rapA inhibitor K06352 phrA; phosphatase RapA inhibitor
D LL3_02855 secD; protein-export membrane protein K12257 secDF; SecD/SecF fusion protein
D LL3_00103 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LL3_03501 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D LL3_00136 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D LL3_02860 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D LL3_03665 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LL3_01755 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D LL3_01757 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LL3_00357 rapC; response regulator aspartate phosphatase K06361 rapC; response regulator aspartate phosphatase C [EC:3.1.-.-]
D LL3_03883 rapF; response regulator aspartate phosphatase RapF K06364 rapF; response regulator aspartate phosphatase F [EC:3.1.-.-]
D LL3_01926 rapK; response regulator aspartate phosphatase K06369 rapK; response regulator aspartate phosphatase K [EC:3.1.-.-]
D LL3_03180 rapH; response regulator aspartate phosphatase K06366 rapH; response regulator aspartate phosphatase H [EC:3.1.-.-]
D LL3_00425 rapH; response regulator aspartate phosphatase K06366 rapH; response regulator aspartate phosphatase H [EC:3.1.-.-]
D LL3_01608 rapA; response regulator aspartate phosphatase A K06359 rapA; response regulator aspartate phosphatase A (stage 0 sporulation protein L) [EC:3.1.-.-]
D LL3_01337 rapA; response regulator aspartate phosphatase K06359 rapA; response regulator aspartate phosphatase A (stage 0 sporulation protein L) [EC:3.1.-.-]
D LL3_03816 rapB; response regulator aspartate phosphatase B K06360 rapB; response regulator aspartate phosphatase B [EC:3.1.-.-]
D LL3_03684 degU; Transcriptional regulatory protein degU K07692 degU; two-component system, NarL family, response regulator DegU
D LL3_03861 stage 0 sporulation protein F K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D LL3_02878 sporulation initiation phosphotransferase K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D LL3_02617 response regulator K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D LL3_00828 bsaP; subtilisin-type proteinase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D LL3_03506 spaK; lantibiotic biosynthesis sensor histidine kinase, putative K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D LL3_03507 spaR; two-component response regulator SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D LL3_03510 spaF; antibiotic transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D LL3_03509 spaE; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D LL3_03508 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bql02030]
D LL3_03186 tlpB; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03187 mcpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03188 tlpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03189 mcpB; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_01498 mcpC; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03738 rbsB; ribose ABC transporter (ribose-binding lipoprotein) K10439 rbsB; ribose transport system substrate-binding protein
D LL3_01803 cheA; chemotactic two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LL3_01804 cheW; modulation of CheA activity in response to attractants (chemotaxis) K03408 cheW; purine-binding chemotaxis protein CheW
D LL3_01793 cheY; regulator of chemotaxis and motility K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01966 ccdB; two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01805 cheC; signal terminating phosphatase of CheR-mediated methylation of methyl-accepting chemotaxis proteins (MCPs) K03410 cheC; chemotaxis protein CheC
D LL3_01802 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LL3_01506 cheV; coupling protein and response regulator for CheA activity in response to attractants (chemotaxis) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D LL3_01806 cheD; sequence specific deamidase required for methylation of methyl-accepting chemotaxis proteins (MCPs) by CheR K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D LL3_02457 cheR; methyl-accepting chemotaxis proteins (MCPs) methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LL3_01781 fliG; flagellar motor switching and energizing component K02410 fliG; flagellar motor switch protein FliG
D LL3_01791 fliM; flagellar motor switching and energizing component K02416 fliM; flagellar motor switch protein FliM
D LL3_01792 fliY; flagellar motor switching and energizing phosphatase K02417 fliN; flagellar motor switch protein FliN
D LL3_03063 motP; motility protein (flagellar motor rotation) K02556 motA; chemotaxis protein MotA
D LL3_01470 motA; motility protein A; MotA component of the stator flagellum complex K02556 motA; chemotaxis protein MotA
D LL3_03062 motS; motility protein (flagellar motor rotation) K02557 motB; chemotaxis protein MotB
D LL3_01469 motB; motility protein B; MotB component of the stator flagellum complex K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bql02040]
D LL3_01779 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LL3_01780 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF
D LL3_01781 fliG; flagellar motor switching and energizing component K02410 fliG; flagellar motor switch protein FliG
D LL3_01782 fliH; flagellar export apparatus component K02411 fliH; flagellar assembly protein FliH
D LL3_01783 fliI; flagellar-specific ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LL3_01784 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D LL3_01786 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D LL3_01790 fliL; flagellar basal-body associated protein K02415 fliL; flagellar protein FliL
D LL3_01791 fliM; flagellar motor switching and energizing component K02416 fliM; flagellar motor switch protein FliM
D LL3_01792 fliY; flagellar motor switching and energizing phosphatase K02417 fliN; flagellar motor switch protein FliN
D LL3_01794 fliZ; flagellar regulatory protein K02418 fliO; flagellar protein FliO/FliZ
D LL3_01795 fliP; component of the flagellar export machinery K02419 fliP; flagellar biosynthesis protein FliP
D LL3_01796 fliQ; component of the flagellar export machinery K02420 fliQ; flagellar biosynthesis protein FliQ
D LL3_01797 fliR; component of the flagellar export machinery K02421 fliR; flagellar biosynthesis protein FliR
D LL3_01799 flhA; component of the flagellar export machinery K02400 flhA; flagellar biosynthesis protein FlhA
D LL3_01798 flhB; component of the flagellar export machinery K02401 flhB; flagellar biosynthesis protein FlhB
D LL3_01777 flgB; flagellar component of cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D LL3_01778 flgC; flagellar component of cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D LL3_01787 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D LL3_01788 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D LL3_03786 flhO; putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D LL3_03785 flhP; putative flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D LL3_03676 flgK; flagellar hook-filament junction K02396 flgK; flagellar hook-associated protein 1
D LL3_03675 flgL; flagellar hook-filament junction K02397 flgL; flagellar hook-associated protein 3 FlgL
D LL3_03671 hag; flagellin protein K02406 fliC; flagellin
D LL3_03670 fliD; Flagellar hook-associated protein 2 HAP2; Filament cap protein; Flagellar cap protein K02407 fliD; flagellar hook-associated protein 2
D LL3_03669 fliS; flagellar assembly protein FliS K02422 fliS; flagellar secretion chaperone FliS
D LL3_03668 fliT; flagellar assembly protein FliT involved in control of flagella expression K02423 fliT; flagellar protein FliT
D LL3_03063 motP; motility protein (flagellar motor rotation) K02556 motA; chemotaxis protein MotA
D LL3_01470 motA; motility protein A; MotA component of the stator flagellum complex K02556 motA; chemotaxis protein MotA
D LL3_03062 motS; motility protein (flagellar motor rotation) K02557 motB; chemotaxis protein MotB
D LL3_01469 motB; motility protein B; MotB component of the stator flagellum complex K02557 motB; chemotaxis protein MotB
D LL3_03678 flgM; anti-sigma factor repressor of sigma(D)-dependent transcription K02398 flgM; negative regulator of flagellin synthesis FlgM
D LL3_00331 yckK; polar amino acid transport system substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LL3_02715 sigA; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D LL3_03562 sigL; RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D LL3_01807 sigD; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LL3_03536 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D LL3_03438 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bql01501]
D LL3_00169 ybbD; putative beta-hexosaminidase, putative lipoprotein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LL3_01222 oppA; oligopeptide ABC transporter (binding lipoprotein) K15580 oppA; oligopeptide transport system substrate-binding protein
D LL3_01223 oppB; oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D LL3_01224 oppC; oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D LL3_01225 oppD; oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D LL3_01226 oppF; oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D LL3_01297 penP; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LL3_00829 yvcC; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_03624 bmrA; efflux transporter (ATP-binding and permease protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_02413 ponA; peptidoglycan glycosyltransferase (penicillin-binding proteins 1A and 1B) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LL3_01100 pbpF; penicillin-binding protein 2C required for spore germination K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D LL3_01268 blm; beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:bql01502]
D LL3_00455 ddl; D-alanyl-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LL3_02615 alrB; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LL3_00465 alrA; D-alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LL3_00456 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LL3_01676 mraY; phospho-N-acetylmuramoyl-pentapeptidetransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LL3_01679 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LL3_02140 yodJ; D-alanyl-D-alanine carboxypeptidase lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bql01503]
D LL3_00150 cwlD; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02848 yrvJ; putative N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_03697 lytC; N-acetylmuramoyl-L-alanine amidase (major autolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02605 yqiI; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_01392 htrA; membrane bound serine protease Do, quality control protease (heat-shock protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_03420 htrB; putative serine protease YvtA K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_03999 dltA; D-alanine:D-alanyl-carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D LL3_04000 dltB; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D LL3_04001 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D LL3_04002 dltD; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid synthesis K03740 dltD; D-alanine transfer protein
D LL3_00862 mprF; lysylphosphatidylglycerol synthase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bql01000]
C 01001 Protein kinases [BR:bql01001]
D LL3_01737 prkC; protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LL3_00470 rsbT; switch protein/serine-threonine kinase; controls the activity of the piezosome (stressosome) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D LL3_00473 rsbW; switch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D LL3_00068 yabT; putative serine/threonine-protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D LL3_03577 epsB; extracellular polysaccharide synthesis, putative protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D LL3_03772 ptkA; protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D LL3_02998 phoR; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LL3_03622 Alkaline phosphatase synthesis sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LL3_03423 cssS; two-component sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D LL3_02495 resE; two-component sensor histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D LL3_04182 walK; sensory box histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D LL3_03115 bceS; two-component sensor histidine kinase controlling resistance to antibiotics affecting the envelope K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D LL3_04100 yxdK; two-component sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D LL3_03506 spaK; lantibiotic biosynthesis sensor histidine kinase, putative K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D LL3_04175 Phosphate regulon sensor protein phoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LL3_03238 comP; two-component sensor histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D LL3_03685 degS; two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D LL3_04118 desK; two-component sensor kinase (NarL family) DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LL3_03432 liaS; sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D LL3_01013 yhcY; two-component sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D LL3_01502 kinA; sporulation-specific ATP-dependent protein histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D LL3_03214 kinB; two-component sensor histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D LL3_01553 kinC; two-component sensor histidine kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D LL3_01466 kinD; histidine kinase phosphorylating Spo0A K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D LL3_01454 kinE; two-component sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D LL3_00781 citS; two-component sensor histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D LL3_00443 dctS; sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D LL3_03221 malK; sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D LL3_02979 lytS; two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D LL3_01803 cheA; chemotactic two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LL3_00231 glnK; two-component sensor kinase, regulation of the glsA-glnT operon K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D LL3_00776 ywpD; putative two-component sensor histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:bql01009]
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_04115 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LL3_01736 phosphorylated protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:bql01002]
D LL3_01702 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LL3_02749 gpr; Germination protease K06012 gpr; spore protease [EC:3.4.24.78]
D LL3_01686 spoI; protease processing pro-sigma-E K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D LL3_00250 pcp; Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D LL3_00674 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LL3_00527 Putative glutamine amidotransferase-like protein yvdE K07010 K07010; putative glutamine amidotransferase
D LL3_01018 lytF; D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D LL3_01024 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D LL3_02113 cwlS; D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwlS K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D LL3_03618 cwlO; secreted cell wall DL-endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D LL3_01401 ykfC; cell wall endopeptidase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D LL3_00691 purF; glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LL3_02044 gltA; glutamate synthase (large subunit) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LL3_00183 glmS; L-glutamine-D-fructose-6-phosphateamidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LL3_01167 asnO; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LL3_03133 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LL3_03185 Intracellular protease 1 K05520 yhbO; deglycase [EC:3.5.1.124]
D LL3_04025 yxeI; putative hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D LL3_00779 ywpE; sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D LL3_01001 yhcS; putative secreted enzyme; sortase K07284 srtA; sortase A [EC:3.4.22.70]
D LL3_02485 ypbD; putative membrane protease K07052 K07052; CAAX protease family protein
D LL3_04227 yyaK; putative integral inner membrane protein K07052 K07052; CAAX protease family protein
D LL3_00575 ydiL; putative membrane protease K07052 K07052; CAAX protease family protein
D LL3_01233 pepF; Oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D LL3_01578 nprE; extracellular neutral metalloprotease K01400 nprE; bacillolysin [EC:3.4.24.28]
D LL3_02681 yqgT; putative gamma-D-glutamyl-L-diamino acid endopeptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D LL3_02140 yodJ; D-alanyl-D-alanine carboxypeptidase lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LL3_00263 cwlK; Peptidoglycan L-alanyl-D-glutamate endopeptidase cwlK Flags: Precursor K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D LL3_03274 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LL3_03088 ytjP; putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LL3_04040 pepT; peptidase T (tripeptidase) K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D LL3_02579 yqjE; putative deacylase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D LL3_01097 yhaA; putative amidohydrolase K01436 yhaA; amidohydrolase [EC:3.5.1.-]
D LL3_00349 yxeP; N-acyl-L-amino acid amidohydrolase K21613 scmP; N-acetylcysteine deacetylase [EC:3.5.1.-]
D LL3_00284 amhX; amidohydrolase K14665 amhX; amidohydrolase [EC:3.5.1.-]
D LL3_01523 dapL; N-acetyl-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D LL3_03325 pucF; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D LL3_03312 hypothetical protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D LL3_00138 mapA; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LL3_00792 mapB; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LL3_02642 yqhT; putative aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LL3_03534 ywaD; double-zinc aminopeptidase K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D LL3_01549 ampS; aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D LL3_02394 ypwA; metal-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D LL3_00071 ftsH; cell-division protein and general stress protein (class III heat-shock) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LL3_01109 yhfE; putative endoglucanase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D LL3_01449 htpX; membrane protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LL3_02882 spoI; membrane metalloprotease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D LL3_01816 rseP; inner membrane zinc metalloprotease required for the extracytoplasmic stress response mediated by sigma(E) (YaeL) K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LL3_01394 dppA; D-alanyl-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D LL3_02659 tasA; major biofilm matrix component K06336 tasA; spore coat-associated protein N
D LL3_02478 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D LL3_00873 mpr; Extracellular metalloprotease K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D LL3_01392 htrA; membrane bound serine protease Do, quality control protease (heat-shock protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_03420 htrB; putative serine protease YvtA K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_01118 aprE; Subtilisin BPN K01342 aprE; subtilisin [EC:3.4.21.62]
D LL3_01165 wprA; cell wall-associated protease K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D LL3_01685 bpr; bacillopeptidase F K13276 bpr; bacillopeptidase F [EC:3.4.21.-]
D LL3_01424 ispA; intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D LL3_00828 bsaP; subtilisin-type proteinase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D LL3_03951 vpr; extracellular serine protease K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D LL3_03991 epr; extracellular serine protease K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D LL3_01883 aprX; alkaline serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D LL3_02532 dacF; D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_00010 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_02503 dacB; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_00170 ybbE; putative protein precursor; beta-lactamase-like protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D LL3_02030 dacC; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LL3_03598 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LL3_02906 lonA; class III heat-shock ATP-dependent LonA protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LL3_02907 lonB; LonB ATP-dependent protease K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D LL3_01662 ylbL; putative degradative enzyme K07177 K07177; Lon-like protease
D LL3_01957 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D LL3_02515 sipS; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LL3_01138 sipV; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LL3_01545 sipT; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LL3_02660 sipW; Signal peptidase type I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D LL3_00879 hypothetical protein K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D LL3_03658 ctpB; carboxy-terminal processing serine protease, cleaves SpoIVFA, this results in processing of pro-SigK K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LL3_02137 ctpA; carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LL3_03031 sppA; signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D LL3_00949 ygaJ; putative peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21]
D LL3_02618 spoI; regulatory membrane-associated serine protease K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D LL3_01399 ykfA; putative L,D-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LL3_02085 yocD; putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LL3_03364 prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D LL3_01774 clpQ; two-component ATP-dependent protease (N-terminal serine protease) K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LL3_02037 ggt; membrane bound gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LL3_03753 ywrD; putative gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D LL3_02820 yrrO; putative hydrolase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D LL3_02821 yrrN; putative hydrolase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D LL3_02034 hypothetical protein K23598 iseA; iseA protein
C 01003 Glycosyltransferases [BR:bql01003]
D LL3_02197 ugtP; UDP-glucose diacylglyceroltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D LL3_02413 ponA; peptidoglycan glycosyltransferase (penicillin-binding proteins 1A and 1B) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LL3_01100 pbpF; penicillin-binding protein 2C required for spore germination K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D LL3_03218 pbpD; penicillin-binding protein 4 K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D LL3_03887 pbpG; penicillin-binding protein 2d K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D LL3_03709 tagA; N-acetylmannosamine (ManNAc) C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid (GlcNAc-pp-undecaprenyl, lipid I) glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D LL3_03707 tagE; UDP-glucose:polyglycerol phosphate alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D LL3_03688 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D LL3_00881 csbB; putative glycosyl transferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D LL3_00882 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein
D LL3_04208 hypothetical protein K00692 sacB; levansucrase [EC:2.4.1.10]
D LL3_03574 epsE; glycosyltransferase K19423 epsE; glycosyltransferase EpsE [EC:2.4.-.-]
D LL3_03573 epsF; Glycogen synthase Starch [bacterial glycogen] synthase K19424 epsF; glycosyltransferase EpsF [EC:2.4.-.-]
D LL3_03571 epsH; putative glycosyltransferase involved in biofilm formation K19425 epsH; glycosyltransferase EpsH [EC:2.4.-.-]
D LL3_03694 tuaC; putative glycosyltransferase K16697 tuaC; teichuronic acid biosynthesis glycosyltransferase TuaC [EC:2.4.-.-]
D LL3_03690 tuaG; putative glycosyltransferase K16698 tuaG; teichuronic acid biosynthesis glycosyltransferase TuaG [EC:2.4.-.-]
D LL3_03689 tuaH; putative glycosyltransferase K16699 tuaH; teichuronic acid biosynthesis glycosyltransferase TuaH [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bql01005]
D LL3_01390 ykcC; putative glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LL3_03688 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bql01011]
D LL3_03823 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LL3_03858 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LL3_01680 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LL3_03070 murC; UDP-N-acetyl muramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LL3_01677 murD; UDP-N-acetylmuramoylalanyl-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LL3_01675 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LL3_00455 ddl; D-alanyl-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LL3_02615 alrB; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LL3_00465 alrA; D-alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LL3_02926 racE; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LL3_01399 ykfA; putative L,D-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LL3_02085 yocD; putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LL3_01676 mraY; phospho-N-acetylmuramoyl-pentapeptidetransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LL3_01679 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LL3_03181 yubB; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LL3_03798 bcrC; undecaprenyl pyrophosphate phosphatase, bacitracin resistance K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LL3_02413 ponA; peptidoglycan glycosyltransferase (penicillin-binding proteins 1A and 1B) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LL3_01100 pbpF; penicillin-binding protein 2C required for spore germination K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D LL3_03218 pbpD; penicillin-binding protein 4 K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D LL3_03887 pbpG; penicillin-binding protein 2d K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D LL3_01673 pbpB; penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B
D LL3_01674 spoV; penicillin-binding protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D LL3_02696 pbpA; transpeptidase (penicillin-binding protein 2A) K21465 pbpA; penicillin-binding protein A
D LL3_01501 pbpH; penicillin-binding enzyme for formation of rod-shaped peptidoglycan cell wall K21466 pbpH; penicillin-binding protein H
D LL3_00397 pbpC; penicillin-binding lipoprotein 3 K21467 pbpC; penicillin-binding protein 3
D LL3_02817 yrrR; Penicillin-binding protein 4B K21468 pbpI; penicillin-binding protein 4B
D LL3_02532 dacF; D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_00010 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_02503 dacB; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LL3_02030 dacC; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LL3_00170 ybbE; putative protein precursor; beta-lactamase-like protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D LL3_02140 yodJ; D-alanyl-D-alanine carboxypeptidase lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LL3_01024 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D LL3_01018 lytF; D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D LL3_03618 cwlO; secreted cell wall DL-endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D LL3_02113 cwlS; D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwlS K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D LL3_03312 hypothetical protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D LL3_00263 cwlK; Peptidoglycan L-alanyl-D-glutamate endopeptidase cwlK Flags: Precursor K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D LL3_00779 ywpE; sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D LL3_01001 yhcS; putative secreted enzyme; sortase K07284 srtA; sortase A [EC:3.4.22.70]
D LL3_02823 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D LL3_02477 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LL3_03822 spoI; Stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D LL3_00150 cwlD; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02848 yrvJ; putative N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_03697 lytC; N-acetylmuramoyl-L-alanine amidase (major autolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02605 yqiI; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bql01004]
D LL3_02003 ituD; malonyl-CoA transacylase ItuD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LL3_01750 fabD; malonyl CoA:acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LL3_01212 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LL3_01107 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III, putative K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LL3_01213 fabF; beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LL3_00533 beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LL3_03496 yvaG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01847 ymfI; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03020 ytkK; putative 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_01751 fabG; beta-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LL3_03783 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LL3_01253 fabI; enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LL3_00935 fabL; enoyl-acyl carrier protein reductase III K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D LL3_04119 des; fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D LL3_01873 baeJ; bacillaene synthesis; hybrid NRPS/PKS protein K13611 pksJ; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksJ/BaeJ
D LL3_01874 baeL; bacillaene synthesis; polyketide synthase of type I K13612 pksL; bacillaene polyketide synthase PksL/BaeL
D LL3_01875 baeL; bacillaene synthesis; polyketide synthase of type I K13613 pksM; bacillaene polyketide synthase PksM/BaeM
D LL3_01876 baeM; bacillaene synthesis; polyketide synthase of type I K13614 pksN; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksN/BaeN
D LL3_01877 baeR; bacillaene synthesis; polyketide synthase of type I K13615 pksR; bacillaene polyketide synthase PksR/BaeR
D LL3_03034 ytcI; putative acyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_03058 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LL3_01115 lcfB; long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_02943 lcfA; long chain acyl-CoA ligase (degradative) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_02023 yngI; AMP-binding domain protein,fatty-acyl-CoA synthase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D LL3_01749 plsX; phosphate:acyl-ACP acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LL3_01980 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LL3_01033 plsC; acyl-ACP:1-acylglycerolphosphateacyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LL3_02185 ypkP; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bql01008]
D LL3_01868 baeE; bacillaene synthesis K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
D LL3_01867 baeD; bacillaene synthesis K15328 pksD; bacillaene synthase trans-acting acyltransferase
D LL3_01873 baeJ; bacillaene synthesis; hybrid NRPS/PKS protein K13611 pksJ; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksJ/BaeJ
D LL3_01874 baeL; bacillaene synthesis; polyketide synthase of type I K13612 pksL; bacillaene polyketide synthase PksL/BaeL
D LL3_01875 baeL; bacillaene synthesis; polyketide synthase of type I K13613 pksM; bacillaene polyketide synthase PksM/BaeM
D LL3_01876 baeM; bacillaene synthesis; polyketide synthase of type I K13614 pksN; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksN/BaeN
D LL3_01877 baeR; bacillaene synthesis; polyketide synthase of type I K13615 pksR; bacillaene polyketide synthase PksR/BaeR
D LL3_02213 bcsA; terpene family molecule synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D LL3_00321 srfA; non-ribosomal surfactin synthetase SrfAA K15654 srfAA; surfactin/lichenysin synthetase A
D LL3_00322 nonribosomal surfactin synthetase SrfAB K15655 srfAB; surfactin/lichenysin synthetase B
D LL3_00323 nonribosomal surfactin synthetase C K15656 srfAC; surfactin/lichenysin synthetase C
D LL3_02002 ituA; iturin A synthetase A K15661 ituA; iturin family lipopeptide synthetase A
D LL3_02001 ituB; iturin A synthetase B K15662 ituB; iturin family lipopeptide synthetase B
D LL3_02000 ituC; iturin A synthetase C K15663 ituC; iturin family lipopeptide synthetase C
D LL3_02028 fenD; nonribosomal fengycin synthesis K15667 ppsD; plipastatin/fengycin lipopeptide synthetase D
D LL3_02027 fenE; nonribosomal fengycin synthesis K15668 ppsE; plipastatin/fengycin lipopeptide synthetase E
D LL3_03264 Uncharacterized protein ybdZ K05375 mbtH; MbtH protein
D LL3_03266 dhbB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D LL3_03267 dhbE; 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E) K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D LL3_03265 dhbF; siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase K04780 dhbF; glyine---[glycyl-carrier protein] ligase [EC:6.2.1.66]
D LL3_01878 baeS; bacillaene synthesis; putative cytochrome P450 oxidase 107K1 K15468 pksS; cytochrome P450 family 107 subfamily K polypeptide 1
D LL3_02212 hypothetical protein K16168 bpsB; methyltransferase
D LL3_01866 baeC; malonyl-CoA-acyltransferase involved in bacillaene synthesis K15327 pksC; polyketide biosynthesis malonyl-CoA-[acyl-carrier-protein] transacylase
D LL3_01037 pksF; putative beta-ketoacyl-synthase K00646 pksF; malonyl-[acp] decarboxylase [EC:4.1.1.124]
D LL3_01869 acpK; bacillaene synthesis; acyl-carrier protein K15337 acpK; polyketide biosynthesis acyl carrier protein
D LL3_01870 baeG; hydroxymethylglutaryl-CoA synthase K15311 pksG; 3-carboxymethyl-3-hydroxy-acyl-[acp] synthase [EC:2.3.3.22]
D LL3_01871 baeH; bacillaene synthesis; enoyl-CoA hydratase K15312 pksH; 3-carboxymethyl-3-hydroxy-acyl-[acp] dehydratase [EC:4.2.1.181]
D LL3_01872 baeI; bacillaene synthesis; enoyl-CoA-hydratase K15313 pksI; 4-carboxy-3-alkylbut-2-enoyl-[acp] decarboxylase [EC:4.1.1.125]
D LL3_00324 nonribosomal surfactin synthetase D K15657 srfATE; external thioesterase TEII
C 01006 Prenyltransferases [BR:bql01006]
D LL3_02623 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LL3_02461 hepS; heptaprenyl diphosphate synthase component I K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D LL3_02459 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D LL3_01813 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LL3_01168 yisP; putative squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D LL3_01893 miaA; tRNA isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LL3_03996 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D LL3_00852 heme O synthase (minor enzyme) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_00853 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01643 ctaB; cytochrome caa3 oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bql01007]
D LL3_00094 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D LL3_03057 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LL3_01221 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LL3_00097 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LL3_03879 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LL3_00040 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LL3_01700 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LL3_02894 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LL3_03107 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LL3_00084 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LL3_02844 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LL3_02417 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LL3_02845 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LL3_02721 glyQ; glycyl-tRNA synthetase (alpha subunit) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LL3_02720 glyS; glycyl-tRNA synthetase (beta subunit) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LL3_00013 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LL3_01817 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LL3_02982 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LL3_02827 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LL3_02953 pheS; phenylalanyl-tRNA synthetase (alpha subunit) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LL3_02952 pheT; phenylalanyl-tRNA synthetase (beta subunit) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LL3_02418 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01036 yhdR; putative aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D LL3_01460 mtnE; methionine-glutamine aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D LL3_01503 patA; aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D LL3_03209 yugH; putative aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D LL3_02447 hisC; histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LL3_01859 kbl; 2-amino-3-ketobutyrate CoA ligase (glycine acetyl transferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LL3_02012 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LL3_03213 patB; C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LL3_04169 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D LL3_01201 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LL3_00373 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D LL3_01007 yhxA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like protein K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D LL3_00942 gsaB; glutamate-1-semialdehyde aminotransferase, class III aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LL3_02898 hemL; glutamate-1-semialdehyde 2,1-aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LL3_01047 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LL3_00225 ybgE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_04003 ilvK; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LL3_01092 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LL3_03324 pucG; putative ureidoglycolate lyase (ureidoglycolase) K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D LL3_03530 Pleiotropic regulatory protein K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:bql00199]
D LL3_02800 yrhJ; putative bifunctional P-450/NADPH-P450 reductase 2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D LL3_00745 yetO; putative cytochrome P450 CYP102A2 K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D LL3_02009 bioI; cytochrome P450 for pimelic acid formation for biotin biosynthesis K16593 bioI; pimeloyl-[acyl-carrier protein] synthase [EC:1.14.14.46]
D LL3_01878 baeS; bacillaene synthesis; putative cytochrome P450 oxidase 107K1 K15468 pksS; cytochrome P450 family 107 subfamily K polypeptide 1
D LL3_01316 yjiB; putative monooxygenase (cytochrome P450) K23138 CYP109; cytochrome P450 family 109 [EC:1.14.-.-]
D LL3_01185 cypC; fatty acid beta-hydroxylating cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:bql00194]
D LL3_03827 atpC; ATP synthase (subunit epsilon, F1 subunit) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LL3_03828 atpD; ATP synthase (subunit beta, component F1) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LL3_03829 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LL3_03830 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LL3_03831 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LL3_03832 atpF; ATP synthase (subunit b, component F0) K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LL3_03833 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LL3_03834 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LL3_03835 atpI; ATP synthase (subunit i) K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bql03000]
D LL3_04074 ddeM; DNA (cytosine-5)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_03374 ydiP; putative DNA (Cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02261 mtbP; Modification methylase Rho11sI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00602 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00167 btr; transcription activator (AraC family DNA-binding domain fused to FeuA-like substrate-binding domain), regulation of the feuABC-ybbA operon K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D LL3_00505 ydeE; putative transcriptional regulator (AraC/XylS family) K13653 K13653; AraC family transcriptional regulator
D LL3_04233 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D LL3_02045 gltC; transcriptional regulator (LysR family) K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D LL3_01025 citR; transcriptional regulator CitR (LysR family) K19242 citR; LysR family transcriptional regulator, repressor for citA
D LL3_00332 bsdA; transcriptional activator of the bsdB-bsdC-bsdD operon K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D LL3_03908 cysL; regulator of sulfur assimilation CysL, activates cysJI expression K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D LL3_03495 ytlI; transcriptional activator of the tcy operon K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
D LL3_01306 lacR; Lactose phosphotransferase system represso K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D LL3_01542 fruR; transcriptional regulator (DeoR family) K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D LL3_03789 spoI; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D LL3_04112 iolR; transcriptional regulator (DeoR family) K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D LL3_03778 glcR; transcriptional regulator (DeoR family) K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D LL3_02719 ccpN; transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D LL3_00379 ycnK; putative transcriptional regulator (DeoR family) K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor
D LL3_03733 rbsR; transcriptional regulator (LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LL3_03064 ccpA; transcriptional regulator (Lacl family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LL3_03100 msmR; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LL3_00808 HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LL3_03597 Sucrose operon repressor; AltName: Scr operon regulatory protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D LL3_01328 exuR; transcriptional regulator (LacI family) K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor
D LL3_03545 araR; Arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D LL3_00802 treR; transcriptional regulator (GntR family) K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D LL3_02136 yydK; putative transcriptional regulator (GntR family) K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D LL3_00553 gmuR; HTH-type transcriptional repressor GmuR K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D LL3_03328 frlR; GntR family transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D LL3_03640 yvoA; transcriptional regulator (GntR family) K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D LL3_01841 ymfC; putative transcriptional regulator (GntR family) K03710 K03710; GntR family transcriptional regulator
D LL3_03560 lutR; repressor of the lutA-lutB-lutC operon K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D LL3_00372 gabR; transcriptional regulator (GntR/MocR family) with PLP binding site K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LL3_00515 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LL3_00520 ydeL; transcriptional regulator (GntR family)-like protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LL3_03123 ytrA; transcriptional regulator (GntR family) K07979 ytrA; GntR family transcriptional regulator
D LL3_02942 fadR; Fatty acid metabolism regulator protein K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D LL3_00253 lmrA; HTH-type transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D LL3_03641 yxaF; transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D LL3_02801 yrhI; HTH-type transcriptional repressor BscR K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D LL3_00409 lrpC; transcriptional regulator (Lrp/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LL3_03755 ywrC; putative transcriptional regulator (Lrp/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LL3_00696 yezC; putative transcriptional regulator (Lrp/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LL3_02929 gerE; transcriptional regulator of spore coat protein K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D LL3_00647 gutR; transcriptional regulator of the glucitol operon K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator
D LL3_03790 ywoH; putative transcriptional regulator (MarR family) K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D LL3_01087 scoC; transcriptional regulator of extracellular protease production and sporulation (MarR family) K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D LL3_01437 ykoM; putative transcriptional regulator (MarR family) K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D LL3_01468 mhqR; transcriptional repressor (MarR family) MhqR K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D LL3_00742 yetL; Uncharacterized HTH-type transcriptional regulator yetL K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D LL3_00481 Putative transcriptional regulato K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LL3_01414 ohrR; transcriptional regulator sensing organic peroxides K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LL3_01309 marR; HTH-type transcriptional regulator sarZ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LL3_01906 glnR; transcriptional regulator (nitrogen metabolism) K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D LL3_01035 cueR; HTH-type transcriptional regulator CueR K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D LL3_00512 adhR; transcriptional activator of adhA-yraA and yraC K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D LL3_01433 tnrA; nitrogen sensing transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D LL3_00762 yfmP; transcriptional regulator (MerR family) of metal efflux transporter expression K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D LL3_02537 fur; transcriptional regulator for iron transport and metabolism K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LL3_02705 zur; transcriptional regulator (Fur family) K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D LL3_00944 perR; transcriptional regulator (Fur family) K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D LL3_00393 kipR; transcriptional regulator (IclR family) K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D LL3_01422 Regulatory protein nsr K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D LL3_01019 nsrR; nitric oxide-responsive regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D LL3_02840 cymR; transcription repressor K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D LL3_04015 aseR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LL3_02079 czrA; HTH-type transcriptional repressor czrA K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D LL3_04171 sdpR; Transcriptional repressor sdpR K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D LL3_02658 sinR; transcriptional regulator for post-exponential-phase response K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation
D LL3_03579 slrR; HTH-type transcriptional regulator slrR K19417 slrR; XRE family transcriptional regulator, biofilm formation regulator
D LL3_00854 padR; transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D LL3_03899 Putative DNA-binding protein yizB K10947 K10947; PadR family transcriptional regulator
D LL3_02647 mntR; transcriptional regulator (DtxR family) K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D LL3_00844 transcriptional activator of maltose utilization K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D LL3_02427 birA; biotin acetyl-CoA-carboxylase ligase and biotin regulon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LL3_02319 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D LL3_03503 rghR; Transcriptional repressor RghR RapGH repressor K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D LL3_03504 rghR; Transcriptional repressor rghRB K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D LL3_03170 yuaC; putative transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D LL3_03515 hypothetical protein K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D LL3_03520 yvbF; putative transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D LL3_03053 Uncharacterized protein yrhO K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D LL3_00049 purR; transcriptional regulator of the purine biosynthesis operon K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D LL3_00841 acoR; transcriptional activator of the acoA-acoB-acoC-acoL operon K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D LL3_03447 yvrH; co-sigma factor (with YvrI) K26990 rsoA; sigma-O factor regulatory protein RsoA
D LL3_02957 ysfB; putative regulator K02647 cdaR; carbohydrate diacid regulator
D LL3_04172 rocR; transcriptional regulator (NtrC/NifA family) K06714 rocR; arginine utilization regulatory protein
D LL3_00571 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D LL3_01776 codY; transcriptional regulator, GTP and BCAA-dependent K03706 codY; transcriptional pleiotropic repressor
D LL3_02306 yopS; SPBc2 prophage-derived uncharacterized HTH-type transcriptional regulator yopS K07727 K07727; putative transcriptional regulator
D LL3_00969 ygzD; putative HTH-type transcriptional regulator K07729 K07729; putative transcriptional regulator
D LL3_00466 ndoA; antitoxin EndoAI EndoA inhibitor K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D LL3_04055 licT; transcriptional antiterminator (BglG family) K03488 licT; beta-glucoside operon transcriptional antiterminator
D LL3_03949 sacT; transcriptional antiterminator K26932 sacT; sacPA operon transcriptional antiterminator
D LL3_01492 glcT; transcriptional antiterminator (BglG family) K03480 glcT; transcriptional antiterminator
D LL3_00400 mtlR; transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D LL3_02792 manR; transcriptional antiterminator K02538 manR; mannose operon transcriptional activator
D LL3_01605 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D LL3_03483 csoR; Copper-sensing transcriptional repressor csoR Copper-sensitive operon repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D LL3_03319 pucR; transcriptional regulator of the purine degradation operon K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D LL3_00304 ycgP; putative transcriptional regulator K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D LL3_00039 abrB; Transition state regulatory protein AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D LL3_01552 abh; transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D LL3_00058 spoV; transcriptional regulator K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D LL3_04243 parB; chromosome positioning near the pole and transport through the polar septum / antagonist of Soj-dependent inhibition of sporulation initiation K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LL3_04245 noc; DNA-binding protein Spo0J-like Noc K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LL3_01008 glpP; glycerol-3-phosphate responding transcription antiterminator K02443 glpP; glycerol uptake operon antiterminator
D LL3_02620 ahrC; transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D LL3_01918 xylR; Xylose repressor K02565 nagC; N-acetylglucosamine repressor
D LL3_02744 hrcA; transcriptional regulator of heat-shock genes K03705 hrcA; heat-inducible transcriptional repressor
D LL3_01246 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D LL3_01247 tenI; inhibitor of thiaminase TenA K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D LL3_00085 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D LL3_03644 yvlC; putative regulator (stress mediated) K03973 pspC; phage shock protein C
D LL3_03542 cggR; transcriptional regulator of gapA K05311 cggR; central glycolytic genes regulator
D LL3_04089 deoR; transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D LL3_01209 med; positive regulator of comK K05519 med; transcriptional activator of comK gene
D LL3_02462 mtrB; Transcription attenuation protein mtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D LL3_01704 pyrR; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LL3_03898 rsfA; prespore-specific regulator K06314 rsfA; prespore-specific regulator
D LL3_01666 ylbO; DNA-binding regulator K06314 rsfA; prespore-specific regulator
D LL3_01496 splA; TRAP-like transcriptional regulator K06315 splA; transcriptional regulator of the spore photoproduct lyase operon
D LL3_00516 Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator
D LL3_02988 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D LL3_04080 hutP; transcriptional antiterminator K09683 hutP; hut operon positive regulatory protein
D LL3_01128 comK; competence transcription factor (CTF) K02250 comK; competence protein ComK
D LL3_01670 mraZ; putative protein involved in cell division or replication K03925 mraZ; transcriptional regulator MraZ
D LL3_03451 yvrL; anti-Sig(YvrI-YvrHa) K26991 yvrL; membrane-bound negative regulator
C 03021 Transcription machinery [BR:bql03021]
D LL3_00141 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LL3_00110 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LL3_00111 rpoC; RNA polymerase (beta'' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LL3_03864 rpoE; RNA polymerase (delta subunit) K03048 rpoE; DNA-directed RNA polymerase subunit delta
D LL3_01729 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LL3_02715 sigA; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D LL3_00176 sigW; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LL3_02494 sigX; RNA polymerase ECF(extracytoplasmic function)-type sigma factor sigma(X) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LL3_00660 sigV; RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma(V)) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LL3_01032 sigM; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LL3_00474 sigB; RNA polymerase sigma-37 factor (sigma(B)) K03090 sigB; RNA polymerase sigma-B factor
D LL3_02774 spoI; RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D LL3_01687 sigE; RNA polymerase sporulation-specific sigma-29 factor (sigma-E) K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D LL3_01688 sigG; RNA polymerase sporulation-specific sigma factor (sigma-G) K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D LL3_02529 sigF; RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D LL3_00101 sigH; RNA polymerase sigma-30 factor (sigma(H)) K27000 sigH; RNA polymerase sigma-H factor
D LL3_01445 sigI; RNA polymerase sigma factor K03093 sigI; RNA polymerase sigma-I factor
D LL3_03448 yvrI; co-sigma factor with YvrHa K26992 sigO; RNA polymerase sigma-O factor
D LL3_03562 sigL; RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D LL3_01807 sigD; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LL3_01352 xpf3; putative RNA polymerase PBSX sigma factor-like protein K24072 xpf; positive control factor
D LL3_00611 xpf1; positive control sigma-like factor K24072 xpf; positive control factor
D LL3_01820 nusA; transcription translation coupling factor involved in Rho-dependent transcription termination K02600 nusA; transcription termination/antitermination protein NusA
D LL3_02627 nusB; transcription termination factor NusB K03625 nusB; transcription antitermination protein NusB
D LL3_00104 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D LL3_00470 rsbT; switch protein/serine-threonine kinase; controls the activity of the piezosome (stressosome) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D LL3_00469 rsbS; antagonist of RsbT K17762 rsbS; rsbT antagonist protein RsbS
D LL3_01425 RsbT co-antagonist protein rsbRB K17763 rsbR; rsbT co-antagonist protein RsbR
D LL3_02119 RsbT co-antagonist protein rsbRC K17763 rsbR; rsbT co-antagonist protein RsbR
D LL3_02674 RsbT co-antagonist protein rsbRD K17763 rsbR; rsbT co-antagonist protein RsbR
D LL3_00468 rsbR; positive regulation of sigma(B) activity in response to salt and heat stress K17763 rsbR; rsbT co-antagonist protein RsbR
D LL3_00471 rsbU; serine phosphatase; controls the activity of the piezosome (stressosome) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D LL3_00475 rsbX; serine phosphatase K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
D LL3_00472 rsbV; anti-anti-sigma factor (antagonist of RsbW) K04749 rsbV; anti-sigma B factor antagonist
D LL3_00473 rsbW; switch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D LL3_02818 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D LL3_03856 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bql03019]
D LL3_01753 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LL3_01837 rnjB; ribonuclease J2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LL3_01557 rnjA; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LL3_01855 ymdA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D LL3_03499 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LL3_01079 yhaM; 3'-5' exonuclease K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D LL3_04057 hbs3; non-specific DNA-binding protein Hbsu K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LL3_00458 cshA; DEAD-box ATP-dependent RNA helicase ydbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LL3_02709 cshB; DEAD-box RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D LL3_02486 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LL3_02090 yocI; putative ATP-dependent nucleic acid helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LL3_03536 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LL3_01828 pnpA; polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LL3_03856 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LL3_03007 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D LL3_02742 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK
D LL3_00577 groEL; class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LL3_01894 ymaH; Protein hfq K03666 hfq; host factor-I protein
D LL3_03672 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator
D LL3_03614 yvcJ; putative ATPase/kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:bql03011]
D LL3_02472 ypfD; RNA degradation presenting factor K02945 RP-S1; small subunit ribosomal protein S1
D LL3_01809 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LL3_00123 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LL3_03046 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LL3_00133 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LL3_04236 rpsF; ribosomal protein S6 (BS9) K02990 RP-S6; small subunit ribosomal protein S6
D LL3_00113 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LL3_00130 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LL3_00140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LL3_00967 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LL3_00129 rpsN; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D LL3_01758 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LL3_00126 rpsQ; ribosomal protein S17 (BS16) K02961 RP-S17; small subunit ribosomal protein S17
D LL3_00122 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LL3_02750 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LL3_02736 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LL3_00106 rplA; ribosomal protein L1 (BL1) K02863 RP-L1; large subunit ribosomal protein L1
D LL3_00121 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LL3_00118 rplC; ribosomal protein L3 (BL3) K02906 RP-L3; large subunit ribosomal protein L3
D LL3_00119 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LL3_00128 rplE; ribosomal protein L5 (BL6) K02931 RP-L5; large subunit ribosomal protein L5
D LL3_00131 rplF; ribosomal protein L6 (BL8) K02933 RP-L6; large subunit ribosomal protein L6
D LL3_04200 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LL3_00107 rplJ; ribosomal protein L10 (BL5) K02864 RP-L10; large subunit ribosomal protein L10
D LL3_00105 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LL3_00108 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LL3_00146 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LL3_00135 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LL3_02974 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LL3_02881 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LL3_00120 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LL3_00127 rplX; ribosomal protein L24 (BL23) K02895 RP-L24; large subunit ribosomal protein L24
D LL3_02879 rpmA; ribosomal protein L27 (BL24) K02899 RP-L27; large subunit ribosomal protein L27
D LL3_01742 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LL3_00125 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LL3_00134 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LL3_03149 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LL3_03855 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LL3_01665 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LL3_00102 rpmG; 50S ribosomal protein L33 3 K02913 RP-L33; large subunit ribosomal protein L33
D LL3_02572 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LL3_00139 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LL3_00054 ctc; 50S ribosomal protein L25 General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D LL3_00112 alternative ribosomal protein L7A K07590 RP-L7A; large subunit ribosomal protein L7A
D LL3_r0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bql03009]
D LL3_01753 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LL3_02724 era; GTP-binding protein K03595 era; GTPase
D LL3_02877 obg; GTPase involved in cell partioning and DNA repair K03979 obgE; GTPase [EC:3.6.5.-]
D LL3_01820 nusA; transcription translation coupling factor involved in Rho-dependent transcription termination K02600 nusA; transcription termination/antitermination protein NusA
D LL3_02627 nusB; transcription termination factor NusB K03625 nusB; transcription antitermination protein NusB
D LL3_00104 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D LL3_03093 ytzG; putative 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D LL3_00044 ksgA; dimethyladenosine 16S ribosomal RNA transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LL3_01734 rsmB; RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LL3_00109 ybxB; ribosomal RNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D LL3_01658 ylbH; putative enzyme with adenosyl binding site K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LL3_02739 rsmE; methylase of U1498 in 16S rRNA K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LL3_04246 rsmG; 7-methylguanosine methyltransferase specific for the 16S rRNA K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LL3_01671 mraW; S-adenosyl-dependent methyltransferase active on membrane-located substrates K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LL3_00038 yabC; putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LL3_02621 yqxC; putative methyltransferase with RNA binding domain K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D LL3_04046 yxjB; rRNA (guanine-N1-)-methyltransferase, putative K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D LL3_00099 rlmB; 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LL3_04158 yydA; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LL3_03988 ywbD; putative AdoMet-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D LL3_01735 yloN; putative Fe-S-cluster AdoMet radical enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LL3_00507 florfenicol/chloramphenicol resistance like protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D LL3_00827 yfjO; putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LL3_00717 yefA; RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LL3_02500 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LL3_01242 yjbO; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LL3_01002 yhcT; putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LL3_01703 rluD; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LL3_00567 ydiD; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LL3_03292 yjcK; putative ribosomal-protein-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D LL3_00405 ydaF; putative ribosomal protein N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D LL3_01761 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D LL3_02740 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LL3_02825 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LL3_00098 mrnC; RNase Mini-III MrnC K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D LL3_04057 hbs3; non-specific DNA-binding protein Hbsu K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LL3_00458 cshA; DEAD-box ATP-dependent RNA helicase ydbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LL3_02709 cshB; DEAD-box RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D LL3_01738 cpgA; GTPase involved in ribosome and sacculus morphogenesis K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LL3_02469 engA; GTPase essential for ribosome 50S subunit assembly K03977 engA; GTPase
D LL3_01764 rbgA; ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D LL3_01904 ynbA; putative GTP-binding protein protease modulator K03665 hflX; GTPase
D LL3_02763 yqeH; GTPase involved in ribosome 30S assembly K06948 yqeH; 30S ribosome assembly GTPase
D LL3_03843 ywlC; putative ribosome maturation factor; RNA binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LL3_02850 relA; GTP pyrophosphokinase (RelA/SpoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LL3_01825 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D LL3_01819 ylxS; putative RNA-binding protein K09748 rimP; ribosome maturation factor RimP
D LL3_00003 yaaA; putative RNA binding protein K14761 rlbA; ribosome-associated protein
D LL3_02758 hypothetical protein K09710 ybeB; ribosome-associated protein
D LL3_02727 yqfG; putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D LL3_02761 yqeI; putative RNA-binding protein K07574 yhbY; RNA-binding protein
D LL3_03666 yvyD; ribosome-associated sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D LL3_04237 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D LL3_01664 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bql03016]
D LL3_02573 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D LL3_02428 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LL3_01817 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LL3_01700 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LL3_03107 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LL3_00040 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LL3_03879 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LL3_00084 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LL3_02844 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LL3_02827 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LL3_02417 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LL3_02982 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LL3_00013 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LL3_00097 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LL3_02894 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LL3_02845 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LL3_02953 pheS; phenylalanyl-tRNA synthetase (alpha subunit) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LL3_02952 pheT; phenylalanyl-tRNA synthetase (beta subunit) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LL3_03057 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LL3_01221 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LL3_02849 dtd; D-Tyr-tRNATyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LL3_01093 hinT; Hit-family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LL3_03081 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LL3_00145 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LL3_01826 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LL3_02839 iscS; cysteine desulfurase involved in tRNA thiolation K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03037 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_02873 nifS; putative desulfurase involved in iron-sulfur clusters for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03843 ywlC; putative ribosome maturation factor; RNA binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LL3_01893 miaA; tRNA isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LL3_04248 thdF; tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LL3_04247 trmF; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LL3_04251 rnpA; protein component of ribonuclease P (RNase P) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LL3_02924 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LL3_03086 ytlP; 2'-5' RNA-ligase family protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D LL3_02721 glyQ; glycyl-tRNA synthetase (alpha subunit) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LL3_02720 glyS; glycyl-tRNA synthetase (beta subunit) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LL3_00094 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D LL3_02795 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D LL3_00019 tadA; tRNA specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LL3_00083 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LL3_01860 ymcB; putative AdoMet radical enzyme for tRNA modification K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LL3_02738 rimO; ribosomal protein S12 methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D LL3_01772 trmF; m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D LL3_01762 trmD; tRNA(m1G37)methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LL3_02713 trmK; tRNA:m1A22 methyl transferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D LL3_00973 cspR; putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LL3_02955 ysgA; putative RNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D LL3_02838 trmU; tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LL3_03294 yutM; putative chaperone involved in Fe-S cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D LL3_02862 queA; S-adenosylmethionine tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LL3_01476 ykvJ; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LL3_01477 queD; 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LL3_01478 queE; queuosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LL3_01479 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LL3_00971 yhbA; putative iron-sulfur containing oxidoreductase subunit K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D LL3_02861 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LL3_03036 thiI; persulfide ATP pyrophosphatase involved in thiamine biosynthesis and tRNA modification K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D LL3_00069 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LL3_00566 ydiC; putative chaperone or protease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LL3_00568 gcp; metalloprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LL3_00565 ydiB; putative ATPase or kinase UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LL3_02843 yrvM; putative enzyme of sulfur-containing coenzyme synthesis K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D LL3_01663 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D LL3_03499 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LL3_01828 pnpA; polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bql03012]
D LL3_01823 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LL3_02975 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LL3_00569 ydiF; putative ABC transporter ATP-binding YdiF K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LL3_01810 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D LL3_00115 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D LL3_00114 fusA; Elongation factor G K02355 fusA; elongation factor G
D LL3_03849 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LL3_01812 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D LL3_03848 prmC; glutamine methylase of release factor 1 K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LL3_00055 spoV; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LL3_02641 efp; elongation factor P K02356 efp; elongation factor P
D LL3_03664 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bql03110]
D LL3_00088 clpC; class III stress response ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D LL3_01472 clpE; ATP-dependent Clp protease (class III stress protein) K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D LL3_02908 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LL3_01775 clpY; two-component ATP-dependent protease (ATPase and chaperone) K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LL3_04115 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LL3_02742 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK
D LL3_00577 groEL; class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LL3_02741 dnaJ; co-factor of molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D LL3_00073 yacC; 33 kDa chaperonin Heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D LL3_02743 grpE; nucleotide exchange factor for DnaK activity K03687 GRPE; molecular chaperone GrpE
D LL3_02096 yocM; putative spore coat protein K13993 HSP20; HSP20 family protein
D LL3_00797 cotP; Spore coat protein P K13993 HSP20; HSP20 family protein
D LL3_00576 groES; class I heat-shock protein (chaperonin) GroES K04078 groES; chaperonin GroES
D LL3_01392 htrA; membrane bound serine protease Do, quality control protease (heat-shock protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_03420 htrB; putative serine protease YvtA K04771 degP; serine protease Do [EC:3.4.21.107]
D LL3_00071 ftsH; cell-division protein and general stress protein (class III heat-shock) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LL3_03834 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LL3_01118 aprE; Subtilisin BPN K01342 aprE; subtilisin [EC:3.4.21.62]
D LL3_01165 wprA; cell wall-associated protease K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D LL3_01685 bpr; bacillopeptidase F K13276 bpr; bacillopeptidase F [EC:3.4.21.-]
D LL3_01424 ispA; intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D LL3_03951 vpr; extracellular serine protease K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D LL3_03991 epr; extracellular serine protease K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D LL3_02518 ppiB; peptidyl-prolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D LL3_01081 prsA; molecular chaperone lipoprotein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D LL3_02937 trxA; Thioredoxin K03671 TXN; thioredoxin
D LL3_02241 yosR; SPBc2 prophage-derived thioredoxin-like protein yosR K03671 TXN; thioredoxin
D LL3_03487 ytnI; putative redoxin K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:bql04131]
D LL3_02458 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LL3_03164 yuaG; putative flotillin-like protein K07192 FLOT; flotillin
D LL3_03541 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LL3_03006 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LL3_04115 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LL3_04056 yxiO; putative efflux transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:bql04121]
C 03051 Proteasome [BR:bql03051]
D LL3_04115 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bql03032]
D LL3_02202 ypeP; putative ribonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LL3_02204 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LL3_02328 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LL3_04074 ddeM; DNA (cytosine-5)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_03374 ydiP; putative DNA (Cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02261 mtbP; Modification methylase Rho11sI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00602 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02464 DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D LL3_02340 yonN; SPBc2 prophage-derived DNA-binding protein HU 2 K03530 hupB; DNA-binding protein HU-beta
D LL3_00001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LL3_00899 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LL3_04189 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LL3_01347 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D LL3_00594 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D LL3_02716 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LL3_02987 dnaB; helicase loading protein; replication initiation membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D LL3_02986 dnaI; helicase loader K11144 dnaI; primosomal protein DnaI
D LL3_03779 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04235 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_02268 yorL; putative DNA polymerase yorL K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_03012 dnaE; DNA polymerase III (alpha subunit) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_01818 polC; DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D LL3_00002 dnaN; DNA polymerase III (beta subunit) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LL3_02751 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LL3_00033 holB; DNA polymerase III delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LL3_00021 dnaX; DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LL3_01765 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LL3_02951 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D LL3_02997 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LL3_00706 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LL3_02206 exoA; 5'3'-exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D LL3_00007 gyrA; DNA gyrase (subunit A) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LL3_00006 gyrB; DNA gyrase (subunit B) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LL3_01983 parC; subunit A of DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LL3_01982 parE; subunit B of DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LL3_01771 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LL3_00410 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bql03036]
D LL3_04074 ddeM; DNA (cytosine-5)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_03374 ydiP; putative DNA (Cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02261 mtbP; Modification methylase Rho11sI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00602 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_01753 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LL3_03164 yuaG; putative flotillin-like protein K07192 FLOT; flotillin
D LL3_01529 rok; repressor of comK K26248 rok; repressor Rok
D LL3_02464 DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D LL3_02340 yonN; SPBc2 prophage-derived DNA-binding protein HU 2 K03530 hupB; DNA-binding protein HU-beta
D LL3_00001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LL3_03143 dps; DNA-protecting protein, ferritin K04047 dps; starvation-inducible DNA-binding protein
D LL3_03419 mrgA; metalloregulation DNA-binding stress protein K04047 dps; starvation-inducible DNA-binding protein
D LL3_01894 ymaH; Protein hfq K03666 hfq; host factor-I protein
D LL3_00409 lrpC; transcriptional regulator (Lrp/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LL3_03755 ywrC; putative transcriptional regulator (Lrp/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LL3_00696 yezC; putative transcriptional regulator (Lrp/AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LL3_01754 smc; chromosome condensation and segregation SMC ATPase K03529 smc; chromosome segregation protein
D LL3_02506 scpA; chromosome condensation and partitioning factor K05896 scpA; segregation and condensation protein A
D LL3_02505 spcB; chromosome condensation and segregation factor K06024 scpB; segregation and condensation protein B
D LL3_01683 ftsA; cell-division protein essential fo Z-ring assembly K03590 ftsA; cell division protein FtsA
D LL3_00064 divI; Cell division protein divIC K13052 divIC; cell division protein DivIC
D LL3_03661 ftsE; cell-division ABC transporter (ATP-binding protein) K09812 ftsE; cell division transport system ATP-binding protein
D LL3_03256 yukB; putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LL3_01840 spoI; spore DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LL3_03072 ytpS; putative DNA translocase stage III sporulation protein (modular protein) K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LL3_01672 ftsL; cell-division protein K03586 ftsL; cell division protein FtsL
D LL3_01681 divI; cell-division initiation protein K03589 ftsQ; cell division protein FtsQ
D LL3_03797 Cell division protein K03588 ftsW; cell division protein FtsW
D LL3_01640 ftsW; cell-division protein K03588 ftsW; cell division protein FtsW
D LL3_01678 spoV; factor for spore cortex peptidoglycan synthesis (stage V sporulation) K03588 ftsW; cell division protein FtsW
D LL3_03660 hypothetical protein K09811 ftsX; cell division transport system permease protein
D LL3_01684 ftsZ; cell-division initiation protein K03531 ftsZ; cell division protein FtsZ
D LL3_02950 hypothetical protein K09888 zapA; cell division protein ZapA
D LL3_00150 cwlD; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02848 yrvJ; putative N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_03697 lytC; N-acetylmuramoyl-L-alanine amidase (major autolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02605 yqiI; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_03039 ezrA; negative regulator of FtsZ ring formation K06286 ezrA; septation ring formation regulator
D LL3_02885 minC; cell-division regulator (septum placement) K03610 minC; septum site-determining protein MinC
D LL3_02884 minD; ATPase activator of MinC K03609 minD; septum site-determining protein MinD
D LL3_01699 divI; cell-division initiation protein K04074 divIVA; cell division initiation protein
D LL3_01696 sepF; cell division machinery factor K09772 sepF; cell division inhibitor SepF
D LL3_03788 mbl; rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_02888 mreB; cell-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_01551 mreB; cell-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_02887 mreC; cell-shape determining protein K03570 mreC; rod shape-determining protein MreC
D LL3_02886 mreD; Rod shape-determining protein mreD K03571 mreD; rod shape-determining protein MreD
D LL3_03958 rodA; factor involved in extension of the lateral walls of the cell K05837 rodA; rod shape determining protein RodA
D LL3_04244 parA; Chromosome partitioning protein parA K03496 parA; chromosome partitioning protein
D LL3_04243 parB; chromosome positioning near the pole and transport through the polar septum / antagonist of Soj-dependent inhibition of sporulation initiation K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LL3_04245 noc; DNA-binding protein Spo0J-like Noc K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LL3_01983 parC; subunit A of DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LL3_01982 parE; subunit B of DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LL3_04247 trmF; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LL3_04246 rsmG; 7-methylguanosine methyltransferase specific for the 16S rRNA K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LL3_01772 trmF; m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D LL3_01773 codV; site-specific tyrosine recombinase for chromosome partitioning K03733 xerC; integrase/recombinase XerC
D LL3_01614 putative tyrosine recombinase XerC-like protein K04763 xerD; integrase/recombinase XerD
D LL3_02535 ripX; site-specific tyrosine recombinase for chromosome partitioning K04763 xerD; integrase/recombinase XerD
D LL3_03851 racA; polar chromosome segregation protein K11686 racA; chromosome-anchoring protein RacA
D LL3_00060 yabN; putative fusion methylase and nucleotide pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D LL3_00151 salA; MRP family regulator SalA K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LL3_02905 ysxC; GTPase involved in ribosome 50S subunit assembly K03978 engB; GTP-binding protein
D LL3_03612 whiA; Putative sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:bql03400]
D LL3_01455 ogt; O6-alkylguanine DNA alkyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LL3_03942 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LL3_04010 aag; putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LL3_00933 yfhQ; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LL3_02415 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LL3_03615 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LL3_03141 mutT; nucleoside triphosphate phosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LL3_01950 yncF; putative deoxyuridine 5''-triphosphate pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LL3_02239 yncF; putative deoxyuridine 5'-triphosphate nucleotidohydrolase yncF K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LL3_04233 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D LL3_04232 adaB; O6-methylguanine-DNA methyltransferase AdaB K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LL3_00826 yfjP; putative DNA-modified purine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LL3_02996 mutM; formamidopyrimidine-DNA glycosidase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LL3_04231 apurinic/apyrimidinic endonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LL3_02708 nvfO; type IV apurinic/apyrimidinic endonuclease K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D LL3_02852 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_02269 yorK; Putative SPBc2 prophage-derived single-strand DNA-specific exonuclease yorK K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LL3_00706 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LL3_02997 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LL3_03648 uvrA; excinuclease ABC (subunit A) K03701 uvrA; excinuclease ABC subunit A
D LL3_03649 uvrB; excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B
D LL3_02936 uvrC; excinuclease ABC (subunit C) K03703 uvrC; excinuclease ABC subunit C
D LL3_03475 helD; DNA 3'-5' helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_01266 yjcD; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_00705 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_02330 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LL3_00110 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LL3_00111 rpoC; RNA polymerase (beta'' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LL3_00141 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LL3_03864 rpoE; RNA polymerase (delta subunit) K03048 rpoE; DNA-directed RNA polymerase subunit delta
D LL3_01729 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LL3_00057 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LL3_01863 mutS; DNA mismatch repair recognition factor K03555 mutS; DNA mismatch repair protein MutS
D LL3_02947 mutS; putative DNA mismatch repair enzyme K07456 mutS2; DNA mismatch repair protein MutS2
D LL3_01864 mutL; DNA mismatch repair factor K03572 mutL; DNA mismatch repair protein MutL
D LL3_02625 xseA; exodeoxyribonuclease VII (large subunit) K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LL3_02624 xseB; exodeoxyribonuclease VII (small subunit) K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LL3_02268 yorL; putative DNA polymerase yorL K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_03012 dnaE; DNA polymerase III (alpha subunit) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LL3_01818 polC; DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D LL3_00002 dnaN; DNA polymerase III (beta subunit) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LL3_02751 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LL3_00033 holB; DNA polymerase III delta'' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LL3_00021 dnaX; DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LL3_03779 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04235 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04073 vsr; DNA mismatch endonuclease, patch repair protein Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D LL3_02836 yrrC; putative exonuclease with DNA/RNA helicase motif K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LL3_01853 recA; Protein recA K03553 recA; recombination protein RecA
D LL3_02865 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D LL3_02864 ruvB; Holliday junction DNA helicase, ATP-dependent component K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LL3_01731 priA; primosomal replication factor Y (primosomal protein N'') K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LL3_01151 sbcC; DNA repair exonuclease subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D LL3_01150 sbcD; DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D LL3_00089 radA; DNA repair protein; 6-O-methylguanine-DNA methyltransferase K04485 radA; DNA repair protein RadA/Sms
D LL3_00004 recF; DNA repair and genetic recombination factor K03629 recF; DNA replication and repair protein RecF
D LL3_01747 recG; branch migrating ATP-dependent DNA helicase involved in DNA recombination and repair K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LL3_02722 recO; DNA double strand break repair and recombination factor K03584 recO; DNA repair protein RecO (recombination protein O)
D LL3_00023 recR; Recombination protein recR K06187 recR; recombination protein RecR
D LL3_02619 recN; factor for double strand breaks DNA repair and genetic recombination K03631 recN; DNA repair protein RecN (Recombination protein N)
D LL3_02412 recU; Holliday junction resolvase K03700 recU; recombination protein U
D LL3_01149 addA; ATP-dependent deoxyribonuclease (subunit A) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D LL3_01148 addB; ATP-dependent deoxyribonuclease (subunit B) K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D LL3_01441 ykoV; ATP-dependent DNA ligase subunit K10979 ku; DNA end-binding protein Ku
D LL3_01440 ykoU; ATP-dependent DNA ligase subunit K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LL3_00007 gyrA; DNA gyrase (subunit A) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LL3_00006 gyrB; DNA gyrase (subunit B) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LL3_01771 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LL3_02464 DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D LL3_02340 yonN; SPBc2 prophage-derived DNA-binding protein HU 2 K03530 hupB; DNA-binding protein HU-beta
D LL3_00591 yqaK; putative DNA recombination protein; skin element K07455 recT; recombination protein RecT
D LL3_02486 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LL3_02090 yocI; putative ATP-dependent nucleic acid helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LL3_02576 polY; translesion synthesis (TLS-) DNA polymerase Y1 K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LL3_02383 uvrX; lesion bypass phage DNA polymerase K03502 umuC; DNA polymerase V
D LL3_01957 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D LL3_00868 recX; regulatory protein RecX K03565 recX; regulatory protein
D LL3_02948 polX; DNA polymerase (family X) K02347 polX; DNA polymerase (family X)
D LL3_02395 ypvA; putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D LL3_02422 dinG; damage inducible ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D LL3_02247 nrdE; Ribonucleoside-diphosphate reductase nrdEB subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LL3_01898 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LL3_02243 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LL3_01899 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LL3_03016 nrnA; oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bql03029]
D LL3_01823 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LL3_02975 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LL3_01810 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D LL3_00115 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D LL3_00114 fusA; Elongation factor G K02355 fusA; elongation factor G
D LL3_02724 era; GTP-binding protein K03595 era; GTPase
D LL3_03057 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LL3_03107 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LL3_02844 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LL3_03879 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LL3_00712 gatA; glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LL3_00713 gatB; glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LL3_00711 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LL3_03779 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_04235 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LL3_02742 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK
D LL3_02743 grpE; nucleotide exchange factor for DnaK activity K03687 GRPE; molecular chaperone GrpE
D LL3_00577 groEL; class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LL3_00576 groES; class I heat-shock protein (chaperonin) GroES K04078 groES; chaperonin GroES
D LL3_02741 dnaJ; co-factor of molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D LL3_02839 iscS; cysteine desulfurase involved in tRNA thiolation K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03037 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_02873 nifS; putative desulfurase involved in iron-sulfur clusters for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_00151 salA; MRP family regulator SalA K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LL3_00852 heme O synthase (minor enzyme) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_00853 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01643 ctaB; cytochrome caa3 oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D LL3_01642 ctaA; heme-A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D LL3_02578 oxaA; Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_04250 spoI; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_02180 scuA; assembly factor BSco of the Cu(A) site of cytochrome c oxidase K07152 SCO1; protein SCO1
D LL3_04115 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bql02000]
D LL3_00940 ygaD; putative ABC transporter ATP-binding protein YgaD K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D LL3_01054 yheI; ABC transporter (ATP-binding protein), also involved in the signaling pathway to activate KinA at the onset of sporulation-like protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_01055 yheH; ABC transporter (ATP-binding protein) involved in the signaling pathway that activates KinA during sporulation initiation K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_00829 yvcC; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_03624 bmrA; efflux transporter (ATP-binding and permease protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_00847 malQ; maltose and maltodextrin ABC transporter subunit (ATP-binding protein) K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_00848 yfiC; putative ABC transporter (ATP-binding protein) K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LL3_03869 ywjA; putative ABC lipid transporter (ATP-binding protein) K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LL3_04028 cydD; ABC membrane transporter (ATP-binding protein) required for cytochrome bd function K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D LL3_04029 cydC; ABC membrane transporter (ATP-binding protein) required for cytochrome bd function K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D LL3_00528 vmlR; antibiotic efflux ATP-binding transport protein K18231 msr; macrolide transport system ATP-binding/permease protein
D LL3_00760 yfmR; putative ABC transporter (ATP-binding protein) YfmR K15738 uup; ABC transport system ATP-binding/permease protein
D LL3_03463 yvgL; putative molybdate-binding lipoprotein K02020 modA; molybdate transport system substrate-binding protein
D LL3_03464 yvgM; putative sulfate transport system permease protein cysT K02018 modB; molybdate transport system permease protein
D LL3_00963 ssuA; aliphatic sulfonate ABC transporter (binding lipoprotein) K15553 ssuA; sulfonate transport system substrate-binding protein
D LL3_00964 ssuC; aliphatic sulfonate ABC transporter (permease) K15554 ssuC; sulfonate transport system permease protein
D LL3_00962 ssuB; aliphatic sulfonate ABC transporter (ATP-binding protein) K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LL3_00283 opuA; glycine betaine ABC transporter (binding protein) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D LL3_00282 opuA; Glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D LL3_00281 opuA; glycine betaine ABC transporter (ATP-binding protein) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D LL3_03512 opuB; choline ABC transporter (binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D LL3_03517 opuC; Glycine betaine/carnitine/choline-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D LL3_03511 opuB; osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03516 opuC; glycine betaine/carnitine/choline ABC transporter OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03518 opuC; Glycine betaine/carnitine/choline transport system permease protein opuCB K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03513 opuC; Glycine betaine/carnitine/choline transport system permease protein opuCD K05846 opuBD; osmoprotectant transport system permease protein
D LL3_03519 opuC; glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LL3_03514 opuB; Glycine betaine/carnitine/choline transport ATP-binding protein opuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LL3_03138 ytlA; putative ABC transporter component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LL3_03140 ytlD; putative permease of ABC transporter K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LL3_03139 ytlC; putative ABC transporter component, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LL3_03327 yurJ; putative multiple sugar ABC transporter (ATP-binding protein) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LL3_04034 msmX; multiple sugar-binding transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LL3_03101 msmE; multiple sugar-binding lipoprotein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LL3_03332 frlO; multiple sugar transport system substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D LL3_03331 frlN; multiple sugar transport system permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LL3_03102 amyD; carbohydrate ABC transporter (permease) K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D LL3_03330 frlM; multiple sugar transport system permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LL3_03103 amyC; maltose and multiple sugars ABC transporter (permease) K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D LL3_03738 rbsB; ribose ABC transporter (ribose-binding lipoprotein) K10439 rbsB; ribose transport system substrate-binding protein
D LL3_03737 rbsC; ribose ABC transporter (permease) K10440 rbsC; ribose transport system permease protein
D LL3_03736 rbsA; ribose ABC transporter (ATP-binding protein) K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D LL3_02964 araN; sugar-binding lipoprotein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D LL3_02963 araP; arabinose/arabinan permease K17235 araP; arabinooligosaccharide transport system permease protein
D LL3_02962 araQ; arabinose/arabinan permease K17236 araQ; arabinooligosaccharide transport system permease protein
D LL3_01183 Uncharacterized lipoprotein yufN K07335 bmpA; basic membrane protein A and related proteins
D LL3_03223 yufN; putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D LL3_03226 yufP; putative permease of ABC transporter K23535 nupB; general nucleoside transport system permease protein
D LL3_03227 yufQ; putative permease of ABC transporter K23536 nupC; general nucleoside transport system permease protein
D LL3_03225 yufO; putative carbohydrate ABC transporter (ATP-binding protein) K23537 nupA; general nucleoside transport system ATP-binding protein
D LL3_01320 yjkA; putative ABC transporter (permease) K02069 STAR2; UDP-glucose/iron transport system permease protein
D LL3_01321 yjkB; Putative ABC transporter ATP-binding protein yjkB K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D LL3_02695 pstS; phosphate ABC transporter (binding lipoprotein) K02040 pstS; phosphate transport system substrate-binding protein
D LL3_02694 pstC; phosphate ABC transporter (permease) K02037 pstC; phosphate transport system permease protein
D LL3_02693 pstA; phosphate ABC transporter (permease) K02038 pstA; phosphate transport system permease protein
D LL3_02691 pstB; phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LL3_02692 pstB; phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LL3_02830 glnH; glutamine ABC transporter (glutamine-binding lipoprotein) K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D LL3_02832 glnP; glutamine ABC transporter (permease) K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D LL3_02831 glnM; putative glutamine transport system permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D LL3_02829 glnQ; glutamine ABC transporter (ATP-binding protein) K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_00331 yckK; polar amino acid transport system substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LL3_00330 tcyB; cystine ABC transporter (permease), membrane protein K10009 tcyB; L-cystine transport system permease protein
D LL3_00329 tcyC; cystine ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_03493 tcyJ; cystine ABC transporter (binding protein) K16956 tcyJ; L-cystine transport system substrate-binding protein
D LL3_03491 ytmL; polar amino acid transport system permease protein K16958 tcyL; L-cystine transport system permease protein
D LL3_03490 tcyM; L-cystine transport system permease protein TcyM K16959 tcyM; L-cystine transport system permease protein
D LL3_03489 tcyN; cystine ABC transporter (ATP-binding protein) K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_02586 artP; high affinity arginine ABC transporter (ATP-binding protein) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D LL3_02585 artQ; high affinity arginine ABC transporter (permease) K17077 artQ; arginine/lysine/histidine transport system permease protein
D LL3_02584 artM; high affinity arginine ABC transporter (ATP-binding protein) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D LL3_00992 yhcJ; putative ABC transporter (binding lipoprotein) K02073 metQ; D-methionine transport system substrate-binding protein
D LL3_03392 metN; methionine ABC transporter (binding lipoprotein) K02073 metQ; D-methionine transport system substrate-binding protein
D LL3_03393 metP; methionine ABC transporter, permease K02072 metI; D-methionine transport system permease protein
D LL3_03394 metQ; methionine ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D LL3_00346 yxeM; amino acid ABC transporter (binding protein)-like protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D LL3_00348 yxeO; amino acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D LL3_01222 oppA; oligopeptide ABC transporter (binding lipoprotein) K15580 oppA; oligopeptide transport system substrate-binding protein
D LL3_01223 oppB; oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D LL3_01224 oppC; oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D LL3_01225 oppD; oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D LL3_01226 oppF; oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D LL3_01398 dppE; dipeptide ABC transporter (dipeptide-binding lipoprotein) K16199 dppE; dipeptide transport system substrate-binding protein
D LL3_01395 dppB; dipeptide ABC transporter (permease) K16200 dppB1; dipeptide transport system permease protein
D LL3_01396 dppC; dipeptide ABC transporter (permease) K16201 dppC; dipeptide transport system permease protein
D LL3_01397 dppD; dipeptide ABC transporter (ATP-binding protein) K16202 dppD; dipeptide transport system ATP-binding protein
D LL3_01217 appA; oligopeptide ABC transporter (oligopeptide-binding lipoprotein); C-terminal part of AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LL3_00954 Periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LL3_01218 appB; oligopeptide ABC transporter (permease) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LL3_00955 Glutathione transport system permease protein gsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LL3_01219 appC; oligopeptide ABC transporter (permease) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LL3_00956 Oligopeptide transport system permease protein oppC Stage 0 sporulation protein KC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LL3_00957 Phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LL3_01215 appD; oligopeptide ABC transporter (ATP-binding protein) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LL3_01216 appF; oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D LL3_01402 ykfD; putative cell wall oligopeptide ABC transporter (ATP binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D LL3_03455 fhuD; ferrichrome ABC transporter (ferrichrome-binding lipoprotein) K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D LL3_04014 iron compound ABC transporter, substrate-binding protein FeuA K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D LL3_04096 yxeB; ABC transporter (ferrioxamine binding lipoprotein) K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D LL3_04012 Ferrichrome transport system permease protein fhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D LL3_03454 fhuB; ferrichrome ABC transporter (permease) K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D LL3_03453 fhuG; ferrichrome ABC transporter (permease) K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D LL3_04013 Ferrichrome transport system permease protein fhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D LL3_03452 fhuC; ferrichrome ABC transporter (ATP-binding protein) K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D LL3_03415 yusV; iron(III)-siderophore transporter (ATP binding component) K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D LL3_00366 yclQ; putative iron-siderophore ABC transporter (binding lipoprotein) K25282 yclQ; iron-siderophore transport system substrate-binding protein
D LL3_00364 yclO; putative iron-siderophore ABC transporter (permease) K25283 yclO; iron-siderophore transport system permease protein
D LL3_00363 yclN; putative iron-siderophore ABC transporter (permease) K25284 yclN; iron-siderophore transport system permease protein
D LL3_00365 yclP; putative iron-siderophore ABC transporter (ATP-binding protein) K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D LL3_01119 yhfQ; putative iron(III) dicitrate-binding lipoprotein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LL3_00166 feuA; iron hydroxamate-binding lipoprotein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LL3_00164 feuC; ABC-transporter for the siderophores enterobactin and bacillibactin FeuC K02015 ABC.FEV.P; iron complex transport system permease protein
D LL3_00165 feuB; iron-uptake protein K02015 ABC.FEV.P; iron complex transport system permease protein
D LL3_01690 ylmA; putative ABC transporter (ATP-binding protein) K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D LL3_03441 yvrC; putative lipoprotein binding vitamin B12 K25034 btuF; cobalamin transport system substrate-binding protein
D LL3_03440 yvrB; putative vitamin B12 permease K25027 btuC; cobalamin transport system permease protein
D LL3_03439 yvrA; putative vitamin B12 transport system, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D LL3_00269 ycdH; zinc transport in via ABC system K09815 znuA; zinc transport system substrate-binding protein
D LL3_00271 yceA; zinc ABC transporter (permease) K09816 znuB; zinc transport system permease protein
D LL3_00270 ycdI; zinc transport in via ABC system K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LL3_03272 bioY; putative biotin transporter K03523 bioY; biotin transport system substrate-specific component
D LL3_01123 bioY; putative biotin transporter bioY K03523 bioY; biotin transport system substrate-specific component
D LL3_00144 ybaF; putative permease K16785 ecfT; energy-coupling factor transport system permease protein
D LL3_01426 thiX; thiamine ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein
D LL3_00142 ybxA; ABC efflux transporter (ATP-binding protein) K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D LL3_00143 ybaE; ABC efflux transporter (ATP-binding protein) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D LL3_01427 thiW; thiamine ABC transporter (ATP-binding protein) K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D LL3_01428 thiV; thiamine ABC transporter ThiV K16925 ykoE; energy-coupling factor transport system permease protein
D LL3_00720 yfiN; putative transport permease yfiN K11051 cylB; multidrug/hemolysin transport system permease protein
D LL3_00719 metN; Methionine import ATP-binding protein metN K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D LL3_03705 tagG; teichoic acid precursors permease K09692 tagG; teichoic acid transport system permease protein
D LL3_03704 tagH; ATP-binding teichoic acid precursor transporter component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D LL3_03509 spaE; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D LL3_03508 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
D LL3_03510 spaF; antibiotic transport system ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D LL3_03469 putative multidrug ABC transporter, permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D LL3_00199 yfiN; Pleiotropic drug resistance protein yfiN1 K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D LL3_00198 yfiM; putative transport permease yfiM K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D LL3_03468 putative multidrug ABC transporter, permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D LL3_00197 yfiL; putative ABC transporter (ATP-binding protein) K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D LL3_03467 putative multidrug ABC transporter, ATPase K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D LL3_03113 bceB; ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D LL3_03114 bceA; bacitracin ABC efflux transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D LL3_04098 yxdM; ABC transporter (permease); efflux of cationic peptides K11636 yxdM; putative ABC transport system permease protein
D LL3_04099 yxdL; ABC transporter (ATP-binding protein); efflux of cationic peptides K11635 yxdL; putative ABC transport system ATP-binding protein
D LL3_03117 ytrF; metabolite permease K16918 ytrF; acetoin utilization transport system permease protein
D LL3_03119 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D LL3_03120 ABC transporter, permease component K16919 ytrC_D; acetoin utilization transport system permease protein
D LL3_03121 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D LL3_03118 ytrE; ABC transporter (ATP-binding protein) K16920 ytrE; acetoin utilization transport system ATP-binding protein
D LL3_03122 ytrB; ABC transporter (ATP-binding protein) K16921 ytrB; acetoin utilization transport system ATP-binding protein
D LL3_01541 yknZ; putative permease K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D LL3_01540 yknY; putative ABC transporter (ATP-binding protein) K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D LL3_03660 hypothetical protein K09811 ftsX; cell division transport system permease protein
D LL3_03661 ftsE; cell-division ABC transporter (ATP-binding protein) K09812 ftsE; cell division transport system ATP-binding protein
D LL3_01095 ecsB; ABC transporter (membrane protein) K25157 ecsB; ABC-2 type transport system permease protein
D LL3_01094 ecsA; ABC transporter (ATP-binding protein) K25158 ecsA; ABC-2 type transport system ATP-binding protein
D LL3_01096 ecsC; putative hydrolase K25159 ecsC; protein EcsC
D LL3_00990 yhcI; ABC transporter (membrane protein)-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_03902 Uncharacterized protein yhcI K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_00448 ydbK; putative efflux ABC-transporter (permease component) K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_01269 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_03090 ythQ; putative ABC transporter (permease) K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_01076 natB; Na+ exporter (ABC permease) K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_03287 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LL3_00989 yhcH; ABC transporter (ATP-binding protein)-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_03091 ythP; putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_03286 Uncharacterized ABC transporter ATP-binding protein yfiL K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_00988 yhcG; putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_01075 natA; Na+-efflux ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_00447 ydbJ; putative ABC transporter (ATP-binding protein) YdbJ K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_01270 Uncharacterized ABC transporter ATP-binding protein yfiL K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LL3_00352 yclI; putative transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D LL3_00351 yclH; putative ABC transporter (ATPase component) K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LL3_03389 sufC; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D LL3_02118 norM; MatE Na+-driven efflux family protein K26939 norM; MATE family, multidrug efflux pump
D LL3_02032 yoeA; putative efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D LL3_01169 yisQ; putative Na+driven efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D LL3_03544 araE; arabinose-like compounds permease K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D LL3_00563 iolT; Sugar/inositol transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D LL3_04106 iolF; inositol transport protein K06610 iolF; MFS transporter, SP family, inositol transporter
D LL3_03595 lacY; Lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D LL3_00156 glcP; Major facilitator superfamily MFS-1 K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D LL3_00297 ycbE; D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D LL3_00811 hypothetical protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D LL3_00555 yycB; putative anion ABC transporter (permease) K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D LL3_01421 putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D LL3_00208 glpT; glycerol-3-phosphate permease K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D LL3_03878 narK; nitrite extrusion permease K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LL3_00532 ydgK; putative efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LL3_03920 putative drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LL3_01143 efflux transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D LL3_03323 Multidrug resistance protein 2 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D LL3_03217 yuxJ; putative exporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D LL3_00552 pbuE; Purine efflux pump pbuE K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D LL3_03919 ywfA; putative efflux transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D LL3_04125 prob; Uncharacterized MFS-type transporter ytbD K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D LL3_02038 ybcL; putative efflux transporter K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D LL3_02782 tetB; multifunctional tetracycline-metal/H+ antiporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D LL3_00252 lmrB; efflux transporter; drug-export protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D LL3_01393 yubD; putative efflux transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D LL3_03437 yvqJ; putative efflux protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LL3_03914 bacE; Putative bacilysin exporter BacE K19552 bacE; MFS transporter, DHA3 family, bacilysin exporter BacE
D LL3_01842 hypothetical protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D LL3_00763 yfmO; metal efflux transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D LL3_00754 yfnC; putative efflux transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D LL3_02799 yybF1; putative permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D LL3_04056 yxiO; putative efflux transporter K06902 UMF1; MFS transporter, UMF1 family
D LL3_02697 yqgE; putative efflux transporter K08222 yqgE; MFS transporter, YQGE family, putative transporter
D LL3_00280 yceI; putative transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D LL3_04228 yyaJ; putative transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D LL3_03601 Hexose transporter 2 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D LL3_01495 ptsI; phosphotransferase system (PTS) enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LL3_01494 phos; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D LL3_02404 ypqE; putative phosphotransferase system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D LL3_01493 ptsG; phosphotransferase system (PTS) glucose-specific enzyme IICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D LL3_00793 nagP; phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D LL3_03948 sacP; phosphotransferase system (PTS) sucrose-specific enzyme IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D LL3_00171 murP; N-acetyl muramic acid-specific phosphotransferase system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D LL3_04072 bglP; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D LL3_00800 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D LL3_00845 malP; PTS system, maltose-specific enzyme IIBC component, putative K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D LL3_01544 fruA; phosphotransferase system (PTS) fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LL3_00383 mtlA; PTS system, mannitol specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D LL3_00382 mtlA; PTS system, mannitol-specific enzyme II, BC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D LL3_01304 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D LL3_01303 lacE; PTS system, lactose-specific IIB component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D LL3_04005 licA; lichenan-specific phosphotransferase system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D LL3_04018 gmuA; glucomannan-specific phosphotransferase system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D LL3_04007 licB; trigger enzyme: lichenan-specific phosphotransferase system, EIIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D LL3_04017 ydhM; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D LL3_03990 ywbA; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D LL3_04006 licC; lichenan-specific phosphotransferase system, EIIC component K02761 celB; cellobiose PTS system EIIC component
D LL3_04019 gmuC; oligo-alpha-mannoside phosphotransferase system enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D LL3_02791 manP; PTS system, mannose-specific IIA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D LL3_01009 glpF; glycerol facilitator K02440 glpF; glycerol uptake facilitator
D LL3_03199 yugO; putative potassium channel protein K10716 kch; voltage-gated potassium channel
D LL3_03795 amtB; Ammonium transporter 1 member 1 AtAMT1;1; Flags: Precursor K03320 amt; ammonium transporter, Amt family
D LL3_00067 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D LL3_03820 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D LL3_03821 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D LL3_02806 hypothetical protein K21993 fdhC; formate transporter
D LL3_03782 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D LL3_01525 ykuT; putative small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D LL3_01044 yhdY; putative integral membrane protein; putative small conductance mechano-sensitive channel K16052 ynaI; MscS family membrane protein
D LL3_01432 mgtE; magnesium transport via permease (no H+) K06213 mgtE; magnesium transporter
D LL3_03063 motP; motility protein (flagellar motor rotation) K02556 motA; chemotaxis protein MotA
D LL3_01470 motA; motility protein A; MotA component of the stator flagellum complex K02556 motA; chemotaxis protein MotA
D LL3_03062 motS; motility protein (flagellar motor rotation) K02557 motB; chemotaxis protein MotB
D LL3_01469 motB; motility protein B; MotB component of the stator flagellum complex K02557 motB; chemotaxis protein MotB
D LL3_00825 yfjQ; magnesium transport in/out via permease (no H+) K03284 corA; magnesium transporter
D LL3_01040 crcB; integral membrane protein possibly involved in chromosome condensation K06199 crcB; fluoride exporter
D LL3_01041 yhdV; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D LL3_03195 yugS; putative membrane protein involved in divalent ion export K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_02673 yqhB; putative membrane associated protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_01039 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_01034 yhdP; hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_02977 lrgA; murein hydrolase regulator LrgA K05338 lrgA; holin-like protein
D LL3_00191 yxzK; UPF0299 membrane protein K06518 cidA; holin-like protein
D LL3_03982 cidA; Holin-like protein CidA K06518 cidA; holin-like protein
D LL3_00650 gutP; Uncharacterized symporter ynaJ K16248 gutA; probable glucitol transport protein GutA
D LL3_00667 gabP; gamma-aminobutyrate (GABA) permease K11735 gabP; GABA permease
D LL3_04131 ydgF; putative amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D LL3_00226 ybgF; putative aminoacid permease K16235 mmuP; S-methylmethionine transporter
D LL3_03921 rocC; arginine/ornithine permease K02205 rocE; arginine/ornithine permease
D LL3_04168 rocE; arginine/ornithine/gamma-aminobutyrate permease K02205 rocE; arginine/ornithine permease
D LL3_04085 hutM; histidine permease K16236 hutM; histidine permease
D LL3_03457 lysP; Y+L amino acid transporter 2 y(+)L-type amino acid transporter 2 K03758 arcD; arginine:ornithine antiporter / lysine permease
D LL3_03429 gerA; component of the germination receptor GerA K06289 gerAB; spore germination protein AB
D LL3_03715 gerB; Spore germination protein yndE K06292 gerBB; spore germination protein BB
D LL3_00343 gerKB; Spore germination protein KB K06296 gerKB; spore germination protein KB
D LL3_00697 yecA; putative amino acid/polyamine permease K16263 yjeH; amino acid efflux transporter
D LL3_00501 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D LL3_00436 yvaE; small multidrug resistance protein, SMR family K03297 emrE; small multidrug resistance pump
D LL3_00556 yydR; molecular chaperone-like protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D LL3_01408 ykkC; efflux transporter K18924 ykkC; paired small multidrug resistance pump
D LL3_00557 hypothetical protein K18924 ykkC; paired small multidrug resistance pump
D LL3_01409 ykkD; efflux transporter K18925 ykkD; paired small multidrug resistance pump
D LL3_01890 ebrA; small multidrug resistance efflux transporter K11814 ebrA; multidrug resistance protein EbrA
D LL3_01889 ebrB; small multidrug efflux transporter K11815 ebrB; multidrug resistance protein EbrB
D LL3_00375 glcU; glucose permease K05340 glcU; glucose uptake protein
D LL3_02123 yojE; putative integral inner membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D LL3_03273 yuiF; amino acid transporter K07084 yuiF; putative amino acid transporter
D LL3_03555 yojA; putative H+/anion permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D LL3_03561 lutP; putative L-lactate permease LutP K03303 lutP; lactate permease
D LL3_03097 opuD; glycine betaine transporter K05020 opuD; glycine betaine transporter
D LL3_00817 chaA; H+/Ca2+ exchanger K07300 chaA; Ca2+:H+ antiporter
D LL3_01717 cysP; sulfate permease K16331 ylnA; sulfate permease
D LL3_00303 ycgO; putative proline/ornithine permease K11928 putP; sodium/proline symporter
D LL3_00223 gltP; proton/glutamate symport protein K11102 gltP; proton glutamate symport protein
D LL3_01110 gltT; proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein
D LL3_00445 dctP; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D LL3_02684 nhaC; Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D LL3_02542 mleN; malate-H+/Na+-lactate antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D LL3_00948 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D LL3_03472 yvgP; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D LL3_02854 yrvC; putative potassium transport accessory component K07228 khtT; K+:H+ antiporter subunit KhtT
D LL3_01071 yhaT; K+/H+ antiporter for K+ efflux K07228 khtT; K+:H+ antiporter subunit KhtT
D LL3_01070 yhaU; K+/H+ antiporter for K+ efflux K26732 khtU; K+:H+ antiporter subunit KhtU
D LL3_01072 khtS; K+/H+ antiporter for K+ efflux K26733 khtS; K+:H+ antiporter modulator KhtS
D LL3_01450 ktrD; K+-transporting ATPase K03498 trkH; trk/ktr system potassium uptake protein
D LL3_01555 ktrC; Ktr system potassium uptake protein C K03499 trkA; trk/ktr system potassium uptake protein
D LL3_03172 ktrA; high affinity potassium transporter KtrAB, peripheric membrane component (proton symport) K03499 trkA; trk/ktr system potassium uptake protein
D LL3_01706 pyrP; uracil permease K02824 uraA; uracil permease
D LL3_02218 pbuX; xanthine permease K16169 pbuX; xanthine permease
D LL3_00677 pbuG; hypoxanthine/guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D LL3_03089 pbuO; putative MFS transporter, AGZA family, xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D LL3_04087 nupC; pyrimidine-nucleoside Na+(H+) cotransporter K11535 nupC; nucleoside transport protein
D LL3_04048 nupG; purine nucleoside transporter NupG K16323 yxjA; purine nucleoside transport protein
D LL3_03756 ywrB; putative anion transporter K07240 chrA; chromate transporter
D LL3_03757 ywrA; putative anion transporter K07240 chrA; chromate transporter
D LL3_03605 yvdB; High affinity sulfate transporter 2 K03321 TC.SULP; sulfate permease, SulP family
D LL3_00161 ybaR; putative permease K03321 TC.SULP; sulfate permease, SulP family
D LL3_00430 mntH; manganese transporter K03322 mntH; manganese transport protein
D LL3_02737 yqeW; phosphate transporter in via three Na+ symporter K03324 yjbB; phosphate:Na+ symporter
D LL3_03744 ywrK; putative Na+/H+ antiporter K03893 arsB; arsenical pump membrane protein
D LL3_04016 aseA; Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D LL3_00509 Arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D LL3_03229 mrpA; Na+/H+ antiporter K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D LL3_03230 mrpB; Na+/H+ antiporter complex K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D LL3_03231 mrpC; component of Na+/H+ antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D LL3_03232 mrpD; component of Na+/H+ antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D LL3_03233 mrpE; non essential component of Na+/H+ antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D LL3_03234 mrpF; efflux transporter for Na+ and cholate K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D LL3_03235 mrpG; non essential component of Na+/H+ antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D LL3_03695 tuaB; colanic acid exporter K16694 tuaB; teichuronic acid exporter
D LL3_02857 spoV; putative translocase with flippase function for teichoic acid synthesis K06409 spoVB; stage V sporulation protein B
D LL3_01486 ykvU; spore membrane protein involved in germination K06409 spoVB; stage V sporulation protein B
D LL3_03568 epsK; putative O-antigen transporter K19418 epsK; membrane protein EpsK
D LL3_03852 ywkB; putative transporter K13936 mdcF; malonate transporter and related proteins
D LL3_01175 yisU; putative aminoacid like metabolite efflux transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D LL3_03054 Inner membrane protein ygaZ K26605 azlC; branched chain amino acid efflux pump
D LL3_03055 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D LL3_02490 ribU; riboflavin transporter K23675 fmnP; riboflavin transporter
D LL3_03163 thiT; thiamine permease K16789 thiT; thiamine transporter
D LL3_02203 ypdP; putative integral inner membrane protein K09125 yhhQ; queuosine precursor transporter
D LL3_03521 yvbG; putative integral inner membrane protein K05595 marC; multiple antibiotic resistance protein
D LL3_03797 Cell division protein K03588 ftsW; cell division protein FtsW
D LL3_01640 ftsW; cell-division protein K03588 ftsW; cell division protein FtsW
D LL3_01678 spoV; factor for spore cortex peptidoglycan synthesis (stage V sporulation) K03588 ftsW; cell division protein FtsW
D LL3_03842 ywlD; putative integral inner membrane protein UPF0059 DUF0204 family K23242 mntP; manganese efflux pump family protein
D LL3_03978 efeU; ferrous ion permease K07243 FTR; high-affinity iron transporter
D LL3_03977 efeM; lipoprotein binding ferrous or ferric iron for transport K07224 efeO; iron uptake system component EfeO
D LL3_03976 efeN; iron-dependent peroxidase convert ferric iron into ferrous iron K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D LL3_01965 ccdA; Cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D LL3_03874 narG; nitrate reductase (alpha subunit) K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03873 narH; nitrate reductase (beta subunit) K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LL3_03871 narI; nitrate reductase (gamma subunit) K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LL3_01539 yknX; putative efflux permease K24950 yknX; membrane fusion protein, antimicrobial resistance system
D LL3_03577 epsB; extracellular polysaccharide synthesis, putative protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D LL3_03772 ptkA; protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D LL3_03578 epsA; modulator of protein tyrosine kinase EpsB K19420 epsA; protein tyrosine kinase modulator
D LL3_03773 tkmA; transmembrane modulator of PtkA activity, activates PtkA autophosphorylation and substrate phosphorylation K19420 epsA; protein tyrosine kinase modulator
D LL3_03161 ytaB; putative receptor K05770 TSPO; translocator protein
D LL3_01310 Uncharacterized protein yhiD K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D LL3_00709 sapB; membrane component K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D LL3_01538 yknW; putative permease K24951 yknW; membrane protein, antimicrobial resistance system
D LL3_03572 epsG; biofilm extracellular matrix formation enzyme K19419 epsG; transmembrane protein EpsG
D LL3_00378 ycnJ; Copper resistance protein D K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:bql02044]
D LL3_02755 comE; ComE operon protein 1 K02237 comEA; competence protein ComEA
D LL3_02754 comE; ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D LL3_02756 comE; ComE operon protein 4 K02239 comER; competence protein ComER
D LL3_03682 comF; helicase competence protein K02240 comFA; competence protein ComFA
D LL3_03681 comF; competence protein FB K02241 comFB; competence protein ComFB
D LL3_03680 comF; competence protein FC K02242 comFC; competence protein ComFC
D LL3_02670 comG; membrane associated factor for DNA competence K02243 comGA; competence protein ComGA
D LL3_02669 comG; membrane platform component of the DNA transport machinery K02244 comGB; competence protein ComGB
D LL3_02668 comG; pilin-like component of the DNA transport membrane platform K02245 comGC; competence protein ComGC
D LL3_02667 comG; membrane component of the DNA transport platform K02246 comGD; competence protein ComGD
D LL3_02666 comG; ComG operon protein 5 K02247 comGE; competence protein ComGE
D LL3_02665 comG; component of the DNA transport platform K02248 comGF; competence protein ComGF
D LL3_02664 comG; component of the DNA transport platform K02249 comGG; competence protein ComGG
D LL3_02892 comC; membrane protease and transmethylase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LL3_01128 comK; competence transcription factor (CTF) K02250 comK; competence protein ComK
D LL3_03240 comQ; isoprenyl transferase (pre-ComX modification) K02251 comQ; competence protein ComQ
D LL3_03239 comX; Competence pheromone Flags: Precursor K02253 comX; competence protein ComX
D LL3_01210 comZ; putative late competence protein K02254 comZ; competence protein ComZ
D LL3_01799 flhA; component of the flagellar export machinery K02400 flhA; flagellar biosynthesis protein FlhA
D LL3_01798 flhB; component of the flagellar export machinery K02401 flhB; flagellar biosynthesis protein FlhB
D LL3_01767 ylqH; putative flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein
D LL3_01780 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF
D LL3_01782 fliH; flagellar export apparatus component K02411 fliH; flagellar assembly protein FliH
D LL3_01783 fliI; flagellar-specific ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LL3_01792 fliY; flagellar motor switching and energizing phosphatase K02417 fliN; flagellar motor switch protein FliN
D LL3_01794 fliZ; flagellar regulatory protein K02418 fliO; flagellar protein FliO/FliZ
D LL3_01795 fliP; component of the flagellar export machinery K02419 fliP; flagellar biosynthesis protein FliP
D LL3_01796 fliQ; component of the flagellar export machinery K02420 fliQ; flagellar biosynthesis protein FliQ
D LL3_01797 fliR; component of the flagellar export machinery K02421 fliR; flagellar biosynthesis protein FliR
D LL3_03665 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LL3_02855 secD; protein-export membrane protein K12257 secDF; SecD/SecF fusion protein
D LL3_00103 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LL3_03501 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D LL3_00136 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D LL3_01757 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LL3_01755 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D LL3_02860 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D LL3_02578 oxaA; Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_04250 spoI; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LL3_00248 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D LL3_00572 tatA; Sec-independent protein translocase protein tatAy K03116 tatA; sec-independent protein translocase protein TatA
D LL3_00249 tatC; component of the twin-arginine pre-protein translocation pathway K03118 tatC; sec-independent protein translocase protein TatC
D LL3_00573 tatC; component of the twin-arginine pre-protein translocation pathway K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bql02042]
D LL3_03195 yugS; putative membrane protein involved in divalent ion export K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_02673 yqhB; putative membrane associated protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_01039 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_01034 yhdP; hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LL3_02184 hypothetical protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bql02022]
D LL3_02998 phoR; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LL3_03622 Alkaline phosphatase synthesis sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LL3_02999 phoP; two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D LL3_03423 cssS; two-component sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D LL3_03422 cssR; two-component response regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D LL3_02495 resE; two-component sensor histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D LL3_02496 resD; Transcriptional regulatory protein resD K07775 resD; two-component system, OmpR family, response regulator ResD
D LL3_04182 walK; sensory box histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D LL3_04183 walR; Transcriptional regulatory protein yycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D LL3_01996 yvrH; Transcriptional regulatory protein yvrH K07668 vicR; two-component system, OmpR family, response regulator VicR
D LL3_03115 bceS; two-component sensor histidine kinase controlling resistance to antibiotics affecting the envelope K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D LL3_03116 bceR; two-component response regulator controlling resistance to antibiotics affecting the envelope K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D LL3_04100 yxdK; two-component sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D LL3_04101 yxdJ; two-component response regulator YxdJ K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D LL3_03506 spaK; lantibiotic biosynthesis sensor histidine kinase, putative K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D LL3_03507 spaR; two-component response regulator SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D LL3_04175 Phosphate regulon sensor protein phoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LL3_04176 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D LL3_00354 yclJ; two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D LL3_03623 Uncharacterized transcriptional regulatory protein K02483 K02483; two-component system, OmpR family, response regulator
D LL3_03238 comP; two-component sensor histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D LL3_03237 comA; two-component response regulator K07691 comA; two-component system, NarL family, competent response regulator ComA
D LL3_03685 degS; two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D LL3_03684 degU; Transcriptional regulatory protein degU K07692 degU; two-component system, NarL family, response regulator DegU
D LL3_04118 desK; two-component sensor kinase (NarL family) DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LL3_04117 desR; two-component response regulator DesR K07693 desR; two-component system, NarL family, response regulator DesR
D LL3_03432 liaS; sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D LL3_03431 liaR; Transcriptional regulatory protein liaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D LL3_01013 yhcY; two-component sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D LL3_01502 kinA; sporulation-specific ATP-dependent protein histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D LL3_03214 kinB; two-component sensor histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D LL3_01553 kinC; two-component sensor histidine kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D LL3_01466 kinD; histidine kinase phosphorylating Spo0A K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D LL3_01454 kinE; two-component sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D LL3_03861 stage 0 sporulation protein F K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D LL3_02617 response regulator K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D LL3_00781 citS; two-component sensor histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D LL3_00782 citT; two-component response regulator K11638 K11638; two-component system, CitB family, response regulator CitT
D LL3_00443 dctS; sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D LL3_00444 dctR; putative C4-dicarboxylate response regulator dctR K11692 K11692; two-component system, CitB family, response regulator DctR
D LL3_03221 malK; sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D LL3_03222 two-component response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D LL3_02979 lytS; two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D LL3_02978 lytT; two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D LL3_02183 yplP; transcriptional enhancer K07714 atoC; two-component system, NtrC family, response regulator AtoC
D LL3_01803 cheA; chemotactic two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LL3_01793 cheY; regulator of chemotaxis and motility K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01966 ccdB; two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01802 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LL3_01506 cheV; coupling protein and response regulator for CheA activity in response to attractants (chemotaxis) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D LL3_00231 glnK; two-component sensor kinase, regulation of the glsA-glnT operon K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D LL3_00232 glnL; two-component response regulator, regulation of the glsA-glnT operon K07719 glnL; two-component system, response regulator GlnL
D LL3_00776 ywpD; putative two-component sensor histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:bql02035]
D LL3_01803 cheA; chemotactic two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LL3_01804 cheW; modulation of CheA activity in response to attractants (chemotaxis) K03408 cheW; purine-binding chemotaxis protein CheW
D LL3_01805 cheC; signal terminating phosphatase of CheR-mediated methylation of methyl-accepting chemotaxis proteins (MCPs) K03410 cheC; chemotaxis protein CheC
D LL3_01806 cheD; sequence specific deamidase required for methylation of methyl-accepting chemotaxis proteins (MCPs) by CheR K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D LL3_02457 cheR; methyl-accepting chemotaxis proteins (MCPs) methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LL3_01802 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LL3_01793 cheY; regulator of chemotaxis and motility K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01966 ccdB; two-component system, chemotaxis family, response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LL3_01506 cheV; coupling protein and response regulator for CheA activity in response to attractants (chemotaxis) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D LL3_03186 tlpB; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03187 mcpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03188 tlpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_03189 mcpB; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_01498 mcpC; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LL3_01124 hemA; heme-based aerotactic trancducer K06595 hemAT; heam-based aerotactic trancducer
D LL3_01782 fliH; flagellar export apparatus component K02411 fliH; flagellar assembly protein FliH
D LL3_01783 fliI; flagellar-specific ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LL3_01784 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D LL3_01794 fliZ; flagellar regulatory protein K02418 fliO; flagellar protein FliO/FliZ
D LL3_01795 fliP; component of the flagellar export machinery K02419 fliP; flagellar biosynthesis protein FliP
D LL3_01796 fliQ; component of the flagellar export machinery K02420 fliQ; flagellar biosynthesis protein FliQ
D LL3_01797 fliR; component of the flagellar export machinery K02421 fliR; flagellar biosynthesis protein FliR
D LL3_01799 flhA; component of the flagellar export machinery K02400 flhA; flagellar biosynthesis protein FlhA
D LL3_01798 flhB; component of the flagellar export machinery K02401 flhB; flagellar biosynthesis protein FlhB
D LL3_01781 fliG; flagellar motor switching and energizing component K02410 fliG; flagellar motor switch protein FliG
D LL3_01791 fliM; flagellar motor switching and energizing component K02416 fliM; flagellar motor switch protein FliM
D LL3_01792 fliY; flagellar motor switching and energizing phosphatase K02417 fliN; flagellar motor switch protein FliN
D LL3_01780 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF
D LL3_01790 fliL; flagellar basal-body associated protein K02415 fliL; flagellar protein FliL
D LL3_01779 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LL3_01786 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D LL3_01777 flgB; flagellar component of cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D LL3_01778 flgC; flagellar component of cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D LL3_01787 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D LL3_03786 flhO; putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D LL3_03785 flhP; putative flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D LL3_01788 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D LL3_03676 flgK; flagellar hook-filament junction K02396 flgK; flagellar hook-associated protein 1
D LL3_03675 flgL; flagellar hook-filament junction K02397 flgL; flagellar hook-associated protein 3 FlgL
D LL3_03671 hag; flagellin protein K02406 fliC; flagellin
D LL3_03670 fliD; Flagellar hook-associated protein 2 HAP2; Filament cap protein; Flagellar cap protein K02407 fliD; flagellar hook-associated protein 2
D LL3_03669 fliS; flagellar assembly protein FliS K02422 fliS; flagellar secretion chaperone FliS
D LL3_03668 fliT; flagellar assembly protein FliT involved in control of flagella expression K02423 fliT; flagellar protein FliT
D LL3_01807 sigD; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LL3_03063 motP; motility protein (flagellar motor rotation) K02556 motA; chemotaxis protein MotA
D LL3_01470 motA; motility protein A; MotA component of the stator flagellum complex K02556 motA; chemotaxis protein MotA
D LL3_03062 motS; motility protein (flagellar motor rotation) K02557 motB; chemotaxis protein MotB
D LL3_01469 motB; motility protein B; MotB component of the stator flagellum complex K02557 motB; chemotaxis protein MotB
D LL3_00331 yckK; polar amino acid transport system substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D LL3_03673 fliW; Flagellar assembly factor fliW K13626 fliW; flagellar assembly factor FliW
D LL3_03678 flgM; anti-sigma factor repressor of sigma(D)-dependent transcription K02398 flgM; negative regulator of flagellin synthesis FlgM
D LL3_01789 ylzI; flagellar protein K02385 flbD; flagellar protein FlbD
D LL3_01800 flhF; GTPase involved in the export of flagella K02404 flhF; flagellar biosynthesis protein FlhF
D LL3_01801 ylxH; essential component of the flagellar assembly machinery K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bql04812]
D LL3_03788 mbl; rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_02888 mreB; cell-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_01551 mreB; cell-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_01684 ftsZ; cell-division initiation protein K03531 ftsZ; cell division protein FtsZ
D LL3_01683 ftsA; cell-division protein essential fo Z-ring assembly K03590 ftsA; cell division protein FtsA
D LL3_02337 Cell division protein FtsZ K22222 cetZ; tubulin-like protein CetZ
D LL3_02885 minC; cell-division regulator (septum placement) K03610 minC; septum site-determining protein MinC
D LL3_02884 minD; ATPase activator of MinC K03609 minD; septum site-determining protein MinD
D LL3_04244 parA; Chromosome partitioning protein parA K03496 parA; chromosome partitioning protein
D LL3_04243 parB; chromosome positioning near the pole and transport through the polar septum / antagonist of Soj-dependent inhibition of sporulation initiation K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LL3_04245 noc; DNA-binding protein Spo0J-like Noc K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bql04147]
D LL3_04115 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LL3_03536 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LL3_03541 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LL3_03539 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LL3_03006 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LL3_03164 yuaG; putative flotillin-like protein K07192 FLOT; flotillin
D LL3_00577 groEL; class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LL3_02742 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK
D LL3_03202 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LL3_00009 guaB; inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LL3_00115 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D LL3_01093 hinT; Hit-family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LL3_00288 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D LL3_01115 lcfB; long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_02943 lcfA; long chain acyl-CoA ligase (degradative) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LL3_01121 yhfS; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_02603 mmgA; degradative acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LL3_00137 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LL3_02851 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LL3_03022 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LL3_03023 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LL3_03968 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D LL3_01010 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LL3_01907 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LL3_02899 hemB; delta-aminolevulinic acid dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LL3_01022 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LL3_02066 yoaD; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_02492 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LL3_00694 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LL3_01567 pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_00840 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02592 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LL3_02939 etfA; electron transfer flavoprotein (alpha subunit) K03522 fixB; electron transfer flavoprotein alpha subunit
D LL3_02574 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LL3_03538 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:bql02048]
D LL3_03026 ytxK; putative nucleic acid methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D LL3_03413 Modification methylase BamHI; M.BamHI; N K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D LL3_04074 ddeM; DNA (cytosine-5)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_03374 ydiP; putative DNA (Cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_02261 mtbP; Modification methylase Rho11sI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00602 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LL3_00906 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D LL3_00467 endo; Endoribonuclease EndoA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D LL3_00466 ndoA; antitoxin EndoAI EndoA inhibitor K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D LL3_02319 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D LL3_03644 yvlC; putative regulator (stress mediated) K03973 pspC; phage shock protein C
D LL3_03760 yxxD; Uncharacterized protein YxxD K21494 yxxD; antitoxin YxxD
D LL3_01684 ftsZ; cell-division initiation protein K03531 ftsZ; cell division protein FtsZ
D LL3_03788 mbl; rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_02888 mreB; cell-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_01551 mreB; cell-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LL3_01983 parC; subunit A of DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LL3_01982 parE; subunit B of DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LL3_02839 iscS; cysteine desulfurase involved in tRNA thiolation K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_03037 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LL3_02873 nifS; putative desulfurase involved in iron-sulfur clusters for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:bql04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:bql04090]
C 01504 Antimicrobial resistance genes [BR:bql01504]
D LL3_00504 putative acetyl-transferase K19273 sat4; streptothricin acetyltransferase [EC:2.3.-.-]
D LL3_00728 aadK; aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D LL3_02782 tetB; multifunctional tetracycline-metal/H+ antiporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D LL3_00948 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D LL3_00507 florfenicol/chloramphenicol resistance like protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D LL3_00528 vmlR; antibiotic efflux ATP-binding transport protein K18231 msr; macrolide transport system ATP-binding/permease protein
D LL3_03437 yvqJ; putative efflux protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LL3_00233 ycbJ; putative phosphotransferase K06979 mph; macrolide phosphotransferase
D LL3_01297 penP; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LL3_02140 yodJ; D-alanyl-D-alanine carboxypeptidase lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LL3_03999 dltA; D-alanine:D-alanyl-carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D LL3_04000 dltB; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D LL3_04001 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D LL3_04002 dltD; putative D-alanine esterase for lipoteichoic acid and wall teichoic acid synthesis K03740 dltD; D-alanine transfer protein
D LL3_00862 mprF; lysylphosphatidylglycerol synthase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D LL3_00829 yvcC; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D LL3_03624 bmrA; efflux transporter (ATP-binding and permease protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bql00537]
D LL3_01022 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bql03100]
D LL3_t0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0057 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0048 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LL3_t0047 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LL3_t0024 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LL3_t0067 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LL3_t0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LL3_t0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0029 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LL3_t0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LL3_t0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0016 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LL3_t0007 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0026 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0069 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LL3_t0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0065 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LL3_t0034 tRNA-His K14226 tRNA-His; tRNA His
D LL3_t0064 tRNA-His K14226 tRNA-His; tRNA His
D LL3_t0001 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LL3_t0004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LL3_t0066 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LL3_t0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LL3_t0017 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LL3_t0051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LL3_t0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LL3_t0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0061 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0006 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0058 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0059 tRNA-Met K14230 tRNA-Met; tRNA Met
D LL3_t0030 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LL3_t0063 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LL3_t0046 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LL3_t0056 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LL3_t0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0068 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LL3_t0050 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LL3_t0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LL3_t0010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LL3_t0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LL3_t0032 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LL3_t0011 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LL3_t0041 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_t0009 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_t0027 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_t0049 tRNA-Val K14237 tRNA-Val; tRNA Val
D LL3_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LL3_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LL3_r0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LL3_r0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LL3_03253 yueD; putative aromatic compound reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D LL3_04113 iolS; aldo-keto reductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D LL3_00259 yccK; Uncharacterized oxidoreductase yccK K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D LL3_00215 glycerol dehydrogenase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D LL3_03204 yugK; putative NADH-dependent butanol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D LL3_03205 yugJ; putative NADH-dependent butanol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D LL3_00837 acoA; acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D LL3_00838 acoB; acetoin dehydrogenase E1 component (TPP-dependent beta subunit) K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D LL3_04148 oxidoreductase, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D LL3_02601 mmgC; short chain acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LL3_00766 yfmJ; Putative NADP-dependent oxidoreductase yfmJ K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D LL3_02570 yqjM; NADPH dehydrogenase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D LL3_01015 yhdA; oxidoreductase, NAD(P)H-FMN and ferric iron reductase K03206 azr; azobenzene reductase [EC:1.7.1.6]
D LL3_03485 azoR; azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D LL3_02092 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D LL3_00485 acyl carrier protein phosphodiesterase 3; NAD(P)H dehydrogenase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D LL3_04129 ahpF; alkyl hydroperoxide reductase (large subunit) K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D LL3_02479 ypdA; putative FAD-dependent disulfide oxidoreductase YpdA K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D LL3_02176 msrA; peptide methionine S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D LL3_02175 msrB; peptide methionine R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D LL3_00441 ydbD; putative manganese-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D LL3_00560 ydhU; putative Mn catalase; C-terminal part of YhdU K07217 ydbD; manganese catalase [EC:1.11.1.6]
D LL3_00943 hypothetical protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LL3_03027 tpx; putative peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LL3_04128 ahpC; alkyl hydroperoxide reductase (small subunit) K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D LL3_01415 ohrB; organic hydroperoxide resistance reductase B K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LL3_00480 ohrB; Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LL3_01413 ohrA; peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LL3_03047 hmp; flavohemoglobin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D LL3_03175 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D LL3_01069 monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D LL3_00344 yxeK; xenobiotic compound monooxygenase, DszA family, A subunit K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D LL3_00666 cotA; spore copper-dependent laccase K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3]
D LL3_00305 ycgT; putative thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D LL3_03281 yumC; ferredoxin-NAD(P)+ oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D LL3_03293 dltE; putative oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D LL3_00238 mhqN; nitroreductase family protein K15976 K15976; putative NAD(P)H nitroreductase [EC:1.-.-.-]
D LL3_02399 ypsC; putative methylase with RNA interaction domain K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D LL3_03586 paiA; polyamine N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D LL3_01283 GCN5-like N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D LL3_03610 yvcN; putative acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D LL3_02152 yodP; putative acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D LL3_03494 hypothetical protein K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-]
D LL3_03959 ysnE; acetyltransferase, GNAT family K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D LL3_03059 acuA; protein acetyltransferase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D LL3_03566 epsM; putative acetyltransferase epsM K19429 epsM; acetyltransferase EpsM [EC:2.3.1.-]
D LL3_00345 hypothetical protein K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-]
D LL3_03190 tgl; protein-glutamine gamma-glutamyltransferase (transglutaminase) K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D LL3_01317 yjiC; putative glycosyltransferase K25230 yjiC; NDP-glycosyltransferase [EC:2.4.1.384]
D LL3_02429 ypjH; putative enzyme in leucine catabolism or biotin metabolism K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D LL3_03575 epsD; Glycogen synthase Starch [bacterial glycogen] synthase K19422 epsD; glycosyltransferase EpsD [EC:2.4.-.-]
D LL3_03569 epsJ; putative glycosyl transferase EpsJ K19427 epsJ; glycosyltransferase EpsJ [EC:2.4.-.-]
D LL3_03636 lgt; prelipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LL3_01195 fosB; metallothiol transferase K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D LL3_03565 epsN; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase UDP-(beta-L-threo-pentapyranosyl-4'-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase K19430 epsN; pyridoxal phosphate-dependent aminotransferase EpsN [EC:2.6.1.-]
D LL3_03329 frlD; Fructosamine kinase frlD K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D LL3_00708 yerI; putative kinase K23983 amiN; amicoumacin kinase [EC:2.7.1.230]
D LL3_01744 yloV; putative dihydroxyacetone/glyceraldehyde kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D LL3_02718 yqfL; modulator of CcpN activity K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D LL3_03375 polL; DNA-dependent DNA polymerase, family A K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D LL3_00993 yhcK; putative diguanylate cyclase or phosphodiesterase K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D LL3_00090 disA; DNA integrity scanning protein DisA (YacK) K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D LL3_00178 ybbP; YbbP K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D LL3_02116 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D LL3_01922 pps; Putative phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D LL3_02530 spoI; anti-sigma factor (antagonist of sigma(F)) and serine kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D LL3_03637 hprK; serine/threonine protein kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D LL3_00087 mcsB; protein arginine kinase, phosphorylates CtsR, modulator of CtsR-dependent repression K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D LL3_03570 epsI; putative pyruvyl transferase epsI K19426 epsI; pyruvyl transferase EpsI [EC:2.-.-.-]
D LL3_03567 epsL; Sugar transferases involved in lipopolysaccharide synthesis K19428 epsL; sugar transferase EpsL [EC:2.-.-.-]
D LL3_03564 epsO; putative pyruvyl transferase epsO K19431 epsO; pyruvyl transferase EpsO [EC:2.-.-.-]
D LL3_03500 yvaK; carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D LL3_01854 pbpX; penicillin-binding endopeptidase X K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D LL3_03580 pnbA; para-nitrobenzyl esterase (intracellular esterase B) K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D LL3_01977 yneP; putative acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LL3_02930 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LL3_00066 spoI; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D LL3_02966 araL; putative phosphatase K02101 araL; sugar-phosphatase [EC:3.1.3.23]
D LL3_03771 ptpZ; phosphotyrosin protein phosphatase, antagonist to PtkA K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D LL3_02764 yqeG; putative hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D LL3_04201 yybT; putative phosphodiesterase yybT K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D LL3_02728 yqfF; putative membrane associate hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D LL3_00041 yabD; metal-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LL3_00043 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D LL3_02390 nuc; thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D LL3_03784 rapD; response regulator aspartate phosphatase K06362 rapD; response regulator aspartate phosphatase D [EC:3.1.-.-]
D LL3_02380 rapI; Response regulator aspartate phosphatase I K06367 rapI; response regulator aspartate phosphatase I [EC:3.1.-.-]
D LL3_00264 rapJ; response regulator aspartate phosphatase K06368 rapJ; response regulator aspartate phosphatase J [EC:3.1.-.-]
D LL3_03270 besA; trilactone hydrolase K07017 besA; ferri-bacillibactin esterase [EC:3.1.-.-]
D LL3_01921 xynA; endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D LL3_04054 bglS; Beta-1,3-1,4-glucanase K01216 bglS; licheninase [EC:3.2.1.73]
D LL3_01301 ganA; secreted arabinogalactan oligomer endo-hydrolase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D LL3_02970 abnA; arabinan-endo 1,5-alpha-L-arabinase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D LL3_04079 abn2; endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D LL3_01997 xynC; Glucuronoxylanase xynC K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D LL3_00017 yaaH; spore peptidoglycan hydrolase K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D LL3_02769 cwlH; N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_01381 xlyA; bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_01339 N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_00640 blyA; bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_02376 xlyA; N-acetylmuramoyl-L-alanine amidase, family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_03346 xlyA; N-acetylmuramoyl-L-alanine amidase, family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_00929 blyA; bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LL3_01561 defB; formylmethionine deformylase A K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LL3_01732 defA; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LL3_02768 Chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LL3_01569 Bifunctional xylanase/deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LL3_02430 hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D LL3_03527 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase Phosphatidylinositol-glycan biosynthesis class L protein; PIG-L K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D LL3_00822 pdaA; exported N-acetylmuramic acid deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D LL3_02120 yojG; putative deacetylase K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D LL3_00050 yabJ; putative gene expression enzyme alteration protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D LL3_03333 frlB; Fructosamine deglycase frlB K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D LL3_00670 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LL3_03841 ywlE; protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D LL3_03867 ywjD; putative UV damage repair endonuclease K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D LL3_03587 padC; Phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D LL3_01497 splB; spore photoproduct (thymine dimer) lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D LL3_04027 hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D LL3_02103 sqhC; squalene-hopene cyclase K18115 sqhC; sporulenol synthase [EC:4.2.1.137]
D LL3_04068 pelB; pectin lyase K01732 E4.2.2.10; pectin lyase [EC:4.2.2.10]
D LL3_03129 hypothetical protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D LL3_04196 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D LL3_03727 ywsC; PGA synthase CapB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D LL3_01725 yloB; P-type calcium transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D LL3_03480 cadA; cation transport P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D LL3_01488 zosA; P-type zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D LL3_03611 crh; catabolite repression HPr-like protein K11184 chr; catabolite repression HPr-like protein
D LL3_04104 iolH; putative sugar-phosphate epimerase/isomerase K06605 iolH; myo-inositol catabolism protein IolH
D LL3_03060 acuB; component of the acetoin degradation regulation pathway K04767 acuB; acetoin utilization protein AcuB
D LL3_03061 acuC; protein deacetylase K04768 acuC; acetoin utilization protein AcuC
D LL3_03558 lutA; lactate oxidase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D LL3_03557 lutB; lactate oxidase K18929 lldF; L-lactate dehydrogenase complex protein LldF
D LL3_03556 lutC; lactate catabolic enzyme K00782 lldG; L-lactate dehydrogenase complex protein LldG
D LL3_01669 yllA; putative nucleoid associated protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D LL3_03818 fdhD; putative subunit of an respiration oxidoreductase K02379 fdhD; FdhD protein
D LL3_02488 fer; Ferredoxin K05337 fer; ferredoxin
D LL3_02714 cccA; cytochrome c550 K13300 cccA; cytochrome c550
D LL3_03662 cccB; cytochrome c551 K12263 cccB; cytochrome c551
D LL3_03386 iscU; nitrogen fixation protein NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D LL3_02111 yojN; putative nitric-oxide reductase K04748 norQ; nitric oxide reductase NorQ protein
D LL3_01519 ykuN; short-chain flavodoxin K03839 fldA; flavodoxin I
D LL3_01521 ykuP; short-chain flavodoxin K03839 fldA; flavodoxin I
D LL3_02940 etfB; electron transfer flavoprotein (beta subunit) K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D LL3_03683 degV; fatty acid binding protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D LL3_01187 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D LL3_01897 nrdI; co-factor of ribonucleotide diphosphate reductase K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D LL3_03850 ywkD; Lactoylglutathione lyase Methylglyoxalase K08234 yaeR; glyoxylase I family protein
D LL3_01695 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D LL3_03576 epsC; putative UDP-sugar epimerase K19421 epsC; polysaccharide biosynthesis protein EpsC
D LL3_03692 tuaE; putative polymerase of teichuronic acid repeating units K16705 tuaE; teichuronic acid biosynthesis protein TuaE
D LL3_03691 tuaF; putative hydrolase involved in teichuronic acid synthesis K16706 tuaF; teichuronic acid biosynthesis protein TuaF
D LL3_00246 cwlJ; N-acetylmuramoyl-L-alanine amidase K01449 cwlJ; cell wall hydrolase
D LL3_01485 ykvT; cell wall hydrolase-like spore cortex-lytic enzyme K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D LL3_02508 ypzK; putative acetyltransferase K02859 ribT; riboflavin biosynthesis RibT protein
D LL3_01534 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D LL3_03881 albG; Antilisterial bacteriocin subtilosin biosynthesis protein AlbG K27618 albG; antilisterial bacteriocin subtilosin biosynthesis protein AlbG
C 99999 Others
D LL3_02131 mhqE; dioxygenase/glyoxalase K15975 K15975; glyoxalase family protein
D LL3_01388 mhqA; hydroquinone-specific dioxygenase K15975 K15975; glyoxalase family protein
D LL3_00240 mhqP; Uncharacterized protein yfiD K15977 K15977; putative oxidoreductase
D LL3_00849 catD; essential for viability in the presence of catechol K15977 K15977; putative oxidoreductase
D LL3_02130 hypothetical protein K06999 K06999; phospholipase/carboxylesterase
D LL3_02190 hypothetical protein K26958 brxA_B; bacilliredoxin
D LL3_02587 hypothetical protein K26958 brxA_B; bacilliredoxin
D LL3_03067 hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LL3_03497 yrdF; putative ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D LL3_00858 ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D LL3_00991 cspB; major cold-shock protein K03704 cspA; cold shock protein
D LL3_02198 Cold-shock protein, molecular chaperone, RNA-helicase co-factor K03704 cspA; cold shock protein
D LL3_00486 cold-shock protein K03704 cspA; cold shock protein
D LL3_00585 phage antirepressor K07741 antB; anti-repressor protein
D LL3_02329 yoqD; SPBc2 prophage-derived putative antirepressor protein yoqD K07741 antB; anti-repressor protein
D LL3_01229 spxA; Regulatory protein spx K16509 spxA; regulatory protein spx
D LL3_02675 mgsR; transcriptional regulator K16509 spxA; regulatory protein spx
D LL3_03971 anti-repressor of SlrR K19432 slrA; anti-repressor of SlrR
D LL3_00476 ydcI; putative RNA binding protein containing S1 RNA binding domain,YdcI K06959 tex; protein Tex
D LL3_01727 UPF0296 protein ylzA K09777 remA; extracellular matrix regulatory protein A
D LL3_00005 remB; regulator of the extracellular matrix, regulation of biofilm formation K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D LL3_03208 yugI; putative RNA degradation protein; putative phosphorylase or nucleotidyl transferase K07570 GSP13; general stress protein 13
D LL3_00065 hypothetical protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D LL3_00086 mcsA; activator of protein kinase McsB K19411 mcsA; protein arginine kinase activator
D LL3_02909 tig; prolyl isomerase (trigger factor) K03545 tig; trigger factor
D LL3_03498 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D LL3_02498 resB; factor required for cytochrome c synthesis K07399 resB; cytochrome c biogenesis protein
D LL3_04152 putative xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor
D LL3_02734 yqeZ; putative membrane bound hydrolase K07403 nfeD; membrane-bound serine protease (ClpP class)
D LL3_02481 mecB; regulator of competence and sporulation K16511 mecA1_2; adapter protein MecA 1/2
D LL3_01231 mecA; adaptor protein controlling oligomerization of the AAA+ protein ClpC K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D LL3_02216 Uncharacterized protein ybaZ K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D LL3_02889 radC; putative DNA repair protein K03630 radC; DNA repair protein RadC
D LL3_04157 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D LL3_00037 yazA; putative UvrC-Intron-type (URI) endonuclease K07461 K07461; putative endonuclease
D LL3_01770 dprA; DNA processing Smf single strand binding protein K04096 smf; DNA processing protein
D LL3_02416 dnaD; DNA-remodelling primosomal protein K02086 dnaD; DNA replication protein
D LL3_01353 xtmA; PBSX defective prophage terminase (small subunit) K07474 xtmA; phage terminase small subunit
D LL3_01354 xtmB; PBSX terminase (large subunit) K06909 xtmB; phage terminase large subunit
D LL3_00617 xtmB; phage terminase, large subunit, pbsx family K06909 xtmB; phage terminase large subunit
D LL3_03398 hypothetical protein K07476 yusF; toprim domain protein
D LL3_02841 yrvN; putative helicase associated protein (ATPase, AAA family) K07478 ycaJ; putative ATPase
D LL3_03373 hypothetical protein K06919 K06919; putative DNA primase/helicase
C 99979 Viral proteins
C 99998 Others
D LL3_00653 pspA; phage shock protein A K03969 pspA; phage shock protein A
D LL3_00022 yaaK; DNA binding protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LL3_01916 xynP; Uncharacterized symporter ynaJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D LL3_03549 yvbW; putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D LL3_00193 ybxG; putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D LL3_03132 ytnA; putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D LL3_00755 yfnA; metabolite permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LL3_01028 ctrA; branched-chain amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LL3_01387 steT; serine/threonine exchanger transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LL3_03893 Uncharacterized amino acid permease yfnA K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LL3_00715 swrC; swarming motility protein SwrC K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D LL3_04053 citH; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D LL3_00337 dtpT; di-tripeptide-proton ABC symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LL3_01385 pit; low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LL3_02133 yodF; putative Na+/metabolite permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D LL3_01134 yhjB; Na+ symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D LL3_00710 opuE; proline transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D LL3_02105 yocR; putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D LL3_01029 yhdH; sodium-dependent transporter-like protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D LL3_01986 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D LL3_03038 braB; branched-chain amino acid-Na+ symporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D LL3_02106 yocS; putative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D LL3_04026 yxlA; putative purine-cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D LL3_03792 pucI; allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D LL3_03296 yutK; putative Na+(H+)/nucleoside cotransporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D LL3_00770 yflS; 2-oxoglutarate/malate transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D LL3_00059 yabM; putative exporter K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D LL3_00025 bofA; inhibitor of the pro-sigma(K) processing machinery K06317 bofA; inhibitor of the pro-sigma K processing machinery
D LL3_02866 bofC; Bypass of forespore C, intercompartmental signaling factor K06318 bofC; forespore regulator of the sigma-K checkpoint
D LL3_02164 cgeA; spore outermost layer component K06319 cgeA; spore maturation protein CgeA
D LL3_02165 cgeB; protein involved in maturation of the outermost layer of the spore K06320 cgeB; spore maturation protein CgeB
D LL3_02163 cgeC; protein involved in maturation of the outermost layer of the spore K06321 cgeC; spore maturation protein CgeC
D LL3_02162 cgeD; protein involved in maturation of the outermost layer of the spore K06322 cgeD; spore maturation protein CgeD
D LL3_02161 cgeE; protein involved in maturation of the outermost layer of the spore K06323 cgeE; spore maturation protein CgeE
D LL3_03746 cotB; spore coat protein (outer) K06325 cotB; spore coat protein B
D LL3_01862 cotE; morphogenic spore protein K06328 cotE; spore coat protein E
D LL3_04204 cotF; spore coat protein K06329 cotF; spore coat protein F
D LL3_03747 cotH; spore coat protein (inner) K06330 cotH; spore coat protein H
D LL3_00729 cotJA; Protein cotJA K06332 cotJA; spore coat protein JA
D LL3_00730 cotJB; Protein cotJB K06333 cotJB; spore coat protein JB
D LL3_00731 cotJC; Protein cotJC K06334 cotJC; spore coat protein JC
D LL3_01969 cotM; spore coat protein M K06335 cotM; spore coat protein M
D LL3_00496 cotR; Putative sporulation hydrolase CotR K25519 cotR; putative sporulation hydrolase
D LL3_01260 cotV; spore coat protein V K06340 cotV; spore coat protein V
D LL3_01259 cotW; spore coat protein (insoluble fraction) K06341 cotW; spore coat protein W
D LL3_01258 cotX; spore coat protein (insoluble fraction) K06342 cotX; spore coat protein X
D LL3_01257 cotY; outer spore coat protein (insoluble fraction) K06343 cotY_Z; CotY/CotZ family spore coat protein
D LL3_01255 cotZ; spore coat protein (insoluble fraction) K06343 cotY_Z; CotY/CotZ family spore coat protein
D LL3_02868 hypothetical protein K06345 coxA; spore cortex protein
D LL3_04249 jag; SpoIIIJ-associated RNA/ssDNA-binding protein K06346 jag; spoIIIJ-associated protein
D LL3_03216 kapD; putative exoribonuclease (3'-5') K06348 kapD; sporulation inhibitor KapD
D LL3_00153 kbaA; inner membrane protein involved in activation of the KinB signaling pathway to sporulation K06349 kbaA; KinB signaling pathway activation protein
D LL3_00392 kipA; putative hydrolase subunit antagonist of KipI K06350 kipA; antagonist of KipI
D LL3_00391 kipI; putative inhibitor of the autophosphorylation reaction of KinA K06351 kipI; inhibitor of KinA
D LL3_02869 safA; morphogenetic protein associated with SpoVID K06370 safA; morphogenetic protein associated with SpoVID
D LL3_02765 sda; Sporulation inhibitor sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D LL3_02657 sinI; antagonist of SinR K06372 sinI; antagonist of SinR
D LL3_02502 spmA; spore maturation protein K06373 spmA; spore maturation protein A
D LL3_02501 spmB; spore maturation protein K06374 spmB; spore maturation protein B
D LL3_01465 negative regulatory phosphatase acting on Spo0A-P (sporulation) K06376 spo0E; stage 0 sporulation regulatory protein
D LL3_02531 spoI; anti-anti-sigma factor (antagonist of SpoIIAB) K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D LL3_02891 spoI; spatial and temporal regulator of the dissolution of septal peptidoglycan during engulfment (stage II sporulation) K06380 spoIIB; stage II sporulation protein B
D LL3_02538 spoI; autolysin component for dissolution of the septal cell wall (stage II sporulation) K06384 spoIIM; stage II sporulation protein M
D LL3_03285 Uncharacterized protein K06384 spoIIM; stage II sporulation protein M
D LL3_02748 spoI; Stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D LL3_03800 spoI; forespore protein required for alternative engulfment K06386 spoIIQ; stage II sporulation protein Q
D LL3_03845 spoI; Stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D LL3_01384 spoI; two-component apoptosis factor K06388 spoIISA; stage II sporulation protein SA
D LL3_01383 spoI; stage II sporulation protein SB K06389 spoIISB; stage II sporulation protein SB
D LL3_02639 spoI; ATP-binding stage III sporulation protein K06390 spoIIIAA; stage III sporulation protein AA
D LL3_02638 spoI; stage III sporulation protein K06391 spoIIIAB; stage III sporulation protein AB
D LL3_02637 spoI; Stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D LL3_02636 spoI; stage III sporulation protein K06393 spoIIIAD; stage III sporulation protein AD
D LL3_02635 spoI; stage III sporulation protein K06394 spoIIIAE; stage III sporulation protein AE
D LL3_02634 spoI; stage III sporulation protein K06395 spoIIIAF; stage III sporulation protein AF
D LL3_02633 spoI; stage III sporulation engulfment assembly protein K06396 spoIIIAG; stage III sporulation protein AG
D LL3_02632 spoI; stage III sporulation ratchet engulfment protein K06397 spoIIIAH; stage III sporulation protein AH
D LL3_02465 spoI; morphogenetic stage IV sporulation protein K06398 spoIVA; stage IV sporulation protein A
D LL3_02173 yokA; putative DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D LL3_02391 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D LL3_01637 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase
D LL3_02883 spoI; regulator of SpoIVFB (stage IV sporulation) K06401 spoIVFA; stage IV sporulation protein FA
D LL3_02528 spoV; stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D LL3_02527 spoV; Stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D LL3_04141 spoV; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D LL3_02057 spoV; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D LL3_02526 spoV; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D LL3_02525 spoV; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D LL3_04142 spoV; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D LL3_02056 spoV; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D LL3_02523 spoV; stage V sporulation germinant protein K06407 spoVAE; stage V sporulation protein AE
D LL3_02524 spoV; spore germinant protein K06407 spoVAE; stage V sporulation protein AE
D LL3_04143 spoV; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D LL3_02055 spoV; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D LL3_02522 spoV; stage V sporulation protein AF K06408 spoVAF; stage V sporulation protein AF
D LL3_01832 spoV; spore dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A
D LL3_01833 spoV; spore dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D LL3_00051 spoV; Putative septation protein spoVG K06412 spoVG; stage V sporulation protein G
D LL3_01903 spoV; mother cell sporulation ATPase K06413 spoVK; stage V sporulation protein K
D LL3_01741 hypothetical protein K06414 spoVM; stage V sporulation protein M
D LL3_01021 spoV; Stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D LL3_01857 spoV; Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D LL3_02897 spoV; morphogenetic spore protein (stage VI sporulation) K06417 spoVID; stage VI sporulation protein D
D LL3_03932 spsF; putative glycosyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D LL3_03035 sspA; putative acyl-coenzyme A synthetase K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D LL3_01058 sspB; small acid-soluble spore protein (beta-type SASP) K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D LL3_01447 sspD; small acid-soluble spore protein (alpha/beta-type SASP) K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D LL3_00936 sspE; Small acid-soluble spore protein gamma-type K06422 sspE; small acid-soluble spore protein E (minor gamma-type SASP)
D LL3_00047 sspF; small acid-soluble spore protein F K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D LL3_00842 sspH; small acid-soluble spore protein K06425 sspH; small acid-soluble spore protein H (minor)
D LL3_02956 sspI; small acid-soluble spore protein K06426 sspI; small acid-soluble spore protein I (minor)
D LL3_03458 sspJ; small acid-soluble spore protein K06427 sspJ; small acid-soluble spore protein J (minor)
D LL3_00874 sspK; Small, acid-soluble spore protein K K06428 sspK; small acid-soluble spore protein K (minor)
D LL3_02205 sspL; small acid-soluble spore protein SspL K06429 sspL; small acid-soluble spore protein L (minor)
D LL3_02410 sspM; acid-soluble spore protein SspM K06430 sspM; small acid-soluble spore protein M (minor)
D LL3_01975 sspN; Small, acid-soluble spore protein N K06431 sspN; small acid-soluble spore protein N (minor)
D LL3_01971 sspO; Small, acid-soluble spore protein O K06432 sspO; small acid-soluble spore protein O (minor)
D LL3_01970 sspP; Small, acid-soluble spore protein P K06433 sspP; small acid-soluble spore protein P (minor)
D LL3_01976 tlp; small acid-soluble spore protein K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D LL3_00045 yabG; sporulation-specific protease K06436 yabG; spore coat assemly protein
D LL3_01530 hypothetical protein K06437 yknT; sigma-E controlled sporulation protein
D LL3_02730 yqfD; stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D LL3_00521 yraD; putative spore coat protein K06439 yraD; similar to spore coat protein
D LL3_00525 yraG; putative spore coat protein K06440 yraG; similar to spore coat protein
D LL3_00522 hypothetical protein K06440 yraG; similar to spore coat protein
D LL3_03428 gerA; Spore germination protein A1 K06288 gerAA; spore germination protein AA
D LL3_03716 gerB; lipoprotein component of the germination receptor B K06293 gerBC; spore germination protein BC
D LL3_00152 gerD; lipoprotein with a role in spores' rapid response to nutrient germinants K06294 gerD; spore germination protein D
D LL3_00341 gerKA; Spore germination protein KA K06295 gerKA; spore germination protein KA
D LL3_03729 gerK; germinationprotein GerKA1 K06295 gerKA; spore germination protein KA
D LL3_00342 gerKC; Spore germination protein KC K06297 gerKC; spore germination protein KC
D LL3_02925 gerM; germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa) lytic enzyme K06298 gerM; germination protein M
D LL3_03249 yueG; putative spore germination protein K06299 gerPA; spore germination protein PA
D LL3_01158 gerP; putative spore germination protein gerPA K06299 gerPA; spore germination protein PA
D LL3_01157 gerP; putative spore germination protein gerPB K06300 gerPB; spore germination protein PB
D LL3_01156 gerP; putative spore germination protein gerPC K06301 gerPC; spore germination protein PC
D LL3_01155 gerP; putative spore germination protein gerPD K06302 gerPD; spore germination protein PD
D LL3_01154 gerP; putative spore germination protein gerPE K06303 gerPE; spore germination protein PE
D LL3_01153 gerP; putative spore germination protein gerPF K06304 gerPF; spore germination protein PF
D LL3_02614 Spore germination protein-like protein ypzD K06304 gerPF; spore germination protein PF
D LL3_02613 ypzD; Uncharacterized protein ypzD K06304 gerPF; spore germination protein PF
D LL3_03938 gerQ; spore coat protein K06305 gerQ; spore germination protein Q
D LL3_02476 ypeB; spore membrane component K06313 ypeB; spore germination protein
C 99993 Cell motility
D LL3_02661 yqxM; lipoprotein for biofilm formation K19433 tapA; TasA anchoring/assembly protein
C 99995 Signaling proteins
D LL3_00275 yceD; general stress protein K05795 terD; tellurium resistance protein TerD
D LL3_00276 yceE; general stress protein K05795 terD; tellurium resistance protein TerD
D LL3_02960 cstA; carbon starvation-induced membrane protein K06200 cstA; carbon starvation protein
D LL3_01583 bipA; GTPase K06207 typA; GTP-binding protein
D LL3_02729 phoH; phosphate starvation-induced protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D LL3_01587 ylaK; putative phosphate starvation inducible protein K07175 phoH2; PhoH-like ATPase
D LL3_00978 prkA; serine protein kinase K07180 prkA; serine protein kinase
D LL3_01181 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D LL3_03725 Polyglutamic acid synthase A K07282 capA; gamma-polyglutamate biosynthesis protein CapA
D LL3_03726 capC; PGA biosynthesis protein CapC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D LL3_02321 hypothetical protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D LL3_02902 hemX; negative effector of the concentration of glutamyl-tRNA reductase HemA K02497 hemX; HemX protein
C 99994 Others
D LL3_03462 yvgK; Uncharacterized protein YvgK K07219 K07219; putative molybdopterin biosynthesis protein
D LL3_03337 hypothetical protein K26994 sdpA; sporulation delaying protein A
D LL3_03336 yitO; putative integral inner membrane protein with HTTM domain K26995 sdpB; sporulation delaying protein B
D LL3_04170 sdpI; Immunity protein sdpI K26996 sdpI; immunity protein, SdpI family
D LL3_00878 hypothetical protein K26996 sdpI; immunity protein, SdpI family
D LL3_03335 hypothetical protein K26997 sdpC; cannibalism toxin, SdpC family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LL3_01232 coiA; protein involved in establishment of DNA transport in competence K06198 coiA; competence protein CoiA
D LL3_02403 yprA; putative ATP-dependent helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D LL3_02073 csaA; molecular chaperone K06878 K06878; tRNA-binding protein
D LL3_03073 ytpR; putative protein with RNA binding domain K06878 K06878; tRNA-binding protein
D LL3_01236 yjbI; putative thiol management oxidoreductase component K06886 glbN; hemoglobin
D LL3_01844 Putative membrane protein ydgH K06994 K06994; putative drug exporter of the RND superfamily
D LL3_02646 hypothetical protein K07001 K07001; NTE family protein
D LL3_01661 ylbK; putative hydrolase K07001 K07001; NTE family protein
D LL3_03385 sufB; FeS cluster formation protein K09014 sufB; Fe-S cluster assembly protein SufB
D LL3_03388 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D LL3_03459 yvsG; putative membrane hydrolase K07038 K07038; inner membrane protein
D LL3_00883 yfhP; putative membrane hydrolase K07038 K07038; inner membrane protein
D LL3_00815 yfkH; putative integral inner membrane protein with ribonuclease fold K07058 K07058; membrane protein
D LL3_03005 ytzA; putative integral inner membrane protein K07113 fxsA; UPF0716 protein FxsA
D LL3_00222 ybfQ; putative enzyme with rhodanese domain K07146 K07146; UPF0176 protein
D LL3_01120 phoE; phosphatase K15640 K15640; uncharacterized phosphatase
D LL3_01649 ctaG; cytochrome aa(3) assembly factor K02862 ctaG; putative membrane protein
D LL3_00478 hypothetical protein K03095 sprL; SprT-like protein
D LL3_01105 yhgE; putative methyl-accepting protein K01421 yhgE; putative membrane protein
D LL3_03643 yvlD; putative integral inner membrane protein K08972 K08972; putative membrane protein
D LL3_02081 yozB; putative integral inner membrane protein K08976 K08976; putative membrane protein
D LL3_00460 hypothetical protein K08981 K08981; putative membrane protein
D LL3_04214 Uncharacterized protein K08987 K08987; putative membrane protein
D LL3_02946 yshE; putative integral inner membrane protein K08989 K08989; putative membrane protein
C 99997 Function unknown
D LL3_00655 hypothetical protein K06872 K06872; uncharacterized protein
D LL3_00438 gsiB; Glucose starvation-inducible protein B K06884 K06884; uncharacterized protein
D LL3_03895 ywfO; Uncharacterized protein YwfO K06885 K06885; uncharacterized protein
D LL3_01193 yitV; putative hydrolase K06889 K06889; uncharacterized protein
D LL3_02551 hypothetical protein K06889 K06889; uncharacterized protein
D LL3_00741 yetJ; putative integral inner membrane protein K06890 K06890; uncharacterized protein
D LL3_01981 yneT; putative CoA-binding protein K06929 K06929; uncharacterized protein
D LL3_03252 yueE; putative metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D LL3_02193 ypgQ; putative metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D LL3_00994 tcyP; L-cystine uptake protein tcyP K06956 K06956; uncharacterized protein
D LL3_01759 ylqC; putative RNA binding protein K06960 K06960; uncharacterized protein
D LL3_00100 yacP; putative ribonuclease with PIN and NYN domains K06962 K06962; uncharacterized protein
D LL3_03196 yugP; putative metal-dependent protease/peptidase K06973 K06973; uncharacterized protein
D LL3_00499 hypothetical protein K07032 K07032; uncharacterized protein
D LL3_00258 hypothetical protein K07039 K07039; uncharacterized protein
D LL3_00960 2-amino-3-carboxymuconate-6-semialdehydedecarboxylase K07045 K07045; uncharacterized protein
D LL3_00867 yfhF; putative nucleotide binding protein K07071 K07071; uncharacterized protein
D LL3_00300 hypothetical protein K07074 K07074; uncharacterized protein
D LL3_03315 yunE; putative integral inner membrane protein K07090 K07090; uncharacterized protein
D LL3_00535 ydhB; putative integral inner membrane protein K07090 K07090; uncharacterized protein
D LL3_01334 yjnA; putative integral inner membrane protein K07090 K07090; uncharacterized protein
D LL3_02922 ysnB; phosphoesterase K07095 K07095; uncharacterized protein
D LL3_01510 ykuE; putative metallophosphoesterase K07098 K07098; uncharacterized protein
D LL3_02482 ypbG; putative phosphoesterase K07098 K07098; uncharacterized protein
D LL3_02874 nadR; transcriptional repressor NadR K07105 K07105; uncharacterized protein
D LL3_03808 ywnB; putative oxidoreductase K07118 K07118; uncharacterized protein
D LL3_01056 yheG; putative NADH-flavin oxidoreductase K07118 K07118; uncharacterized protein
D LL3_01142 yhjN; putative integral inner membrane protein K07120 K07120; uncharacterized protein
D LL3_02564 yqjQ; putative metabolite dehydrogenase, NAD-binding protein K07124 K07124; uncharacterized protein
D LL3_03126 ytqA; putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D LL3_03585 yyaS; putative integral inner membrane protein K07149 K07149; uncharacterized protein
D LL3_00328 hypothetical protein K07149 K07149; uncharacterized protein
D LL3_03147 hypothetical protein K08998 K08998; uncharacterized protein
D LL3_02735 hypothetical protein K09117 K09117; uncharacterized protein
D LL3_00459 hypothetical protein K09167 K09167; uncharacterized protein
D LL3_00718 Uncharacterized protein K09384 K09384; uncharacterized protein
D LL3_03894 hypothetical protein K09388 K09388; uncharacterized protein
D LL3_02507 ypuF; SMC interacting protein K09763 K09763; uncharacterized protein
D LL3_01824 hypothetical protein K09764 K09764; uncharacterized protein
D LL3_02717 hypothetical protein K09768 K09768; uncharacterized protein
D LL3_00032 hypothetical protein K09770 K09770; uncharacterized protein
D LL3_03275 yuiD; putative integral inner membrane protein K09775 K09775; uncharacterized protein
D LL3_01515 ykuK; putative RNAse K09776 K09776; uncharacterized protein
D LL3_03207 hypothetical protein K09779 K09779; uncharacterized protein
D LL3_00980 yhbH; factor involved in shape determination (sporulation) K09786 K09786; uncharacterized protein
D LL3_01756 ylxM; UPF0122 protein K09787 K09787; uncharacterized protein
D LL3_02699 yqgC; putative integral inner membrane protein K09793 K09793; uncharacterized protein
D LL3_01182 yitL; putative RNA-binding protein K00243 K00243; uncharacterized protein
D LL3_01963 yneF; UPF0154 protein K09976 K09976; uncharacterized protein
D LL3_01129 hypothetical protein K05937 K05937; uncharacterized protein
D LL3_02704 yqfW; putative nucleotidase K05967 K05967; uncharacterized protein
D LL3_02402 yprB; putative nucleic acid binding enzyme K07502 yprB; uncharacterized protein
D LL3_02880 hypothetical protein K07584 ysxB; uncharacterized protein
D LL3_01386 ykaA; putative Pit accessory protein K07220 K07220; uncharacterized protein
D LL3_00939 hypothetical protein K07586 ygaC; uncharacterized protein
D LL3_01821 ylxR; putative RNA binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024