+D GENES KO
#
KEGG Orthology (KO) - Brachybacterium sp. GU-2
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:brac00010]
D RBL05_05345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBL05_03025 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBL05_02995 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBL05_08440 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RBL05_15610 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBL05_12035 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBL05_05865 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBL05_05855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBL05_05860 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBL05_01885 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RBL05_04840 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBL05_05715 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBL05_14590 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBL05_06890 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RBL05_06715 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_00900 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RBL05_07810 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RBL05_00905 adh; (GenBank) aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_06820 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RBL05_15170 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:brac00020]
D RBL05_03080 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RBL05_03510 bifunctional 2-methylcitrate synthase/citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RBL05_05490 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RBL05_09770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBL05_08400 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_02000 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBL05_01995 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBL05_09385 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RBL05_09390 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RBL05_09375 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RBL05_09380 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RBL05_10235 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RBL05_04075 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D RBL05_06890 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RBL05_06715 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:brac00030]
D RBL05_03025 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBL05_05880 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RBL05_08595 NAD(P)-dependent oxidoreductase K19243 azf; NAD+ dependent glucose-6-phosphate dehydrogenase [EC:1.1.1.388]
D RBL05_01525 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RBL05_06530 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBL05_05890 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBL05_07405 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBL05_05885 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RBL05_03380 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_13585 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_15040 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_03615 hxlA; (GenBank) 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D RBL05_03620 hxlB; (GenBank) 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D RBL05_09810 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D RBL05_09325 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RBL05_14550 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_17010 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBL05_15455 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBL05_14385 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D RBL05_12035 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBL05_15610 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBL05_02995 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBL05_08440 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:brac00040]
D RBL05_14395 uxaC; (GenBank) glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D RBL05_12370 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RBL05_07385 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBL05_13515 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RBL05_06530 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBL05_13520 araA; (GenBank) L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RBL05_15550 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RBL05_15545 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RBL05_06355 NAD(P)-dependent alcohol dehydrogenase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
C 00051 Fructose and mannose metabolism [PATH:brac00051]
D RBL05_15975 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RBL05_09315 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RBL05_02995 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBL05_08440 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RBL05_15610 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBL05_15545 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RBL05_13050 mannitol dehydrogenase family protein K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67]
D RBL05_12035 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBL05_05865 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBL05_03380 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_13585 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_15040 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_09850 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:brac00052]
D RBL05_10735 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RBL05_12995 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6]
D RBL05_02055 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBL05_07385 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_05345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBL05_12305 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBL05_03580 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RBL05_09150 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RBL05_13520 araA; (GenBank) L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RBL05_02995 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBL05_11070 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:brac00053]
D RBL05_12370 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RBL05_13255 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RBL05_13515 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:brac00500]
D RBL05_11070 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RBL05_07385 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBL05_09720 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBL05_15170 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RBL05_08225 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RBL05_03325 glgP; (GenBank) alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RBL05_01310 treS; (GenBank) maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RBL05_06410 glgA; (GenBank) glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RBL05_05015 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RBL05_05010 treY; (GenBank) malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_05345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBL05_03025 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:brac00620]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBL05_06890 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RBL05_06715 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_03085 pyruvate formate lyase family protein K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RBL05_00900 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RBL05_07810 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RBL05_01825 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBL05_01830 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RBL05_05715 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBL05_09300 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RBL05_00905 adh; (GenBank) aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RBL05_03495 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RBL05_15865 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D RBL05_00245 dld; (GenBank) D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D RBL05_08805 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBL05_04075 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D RBL05_10235 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RBL05_01140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RBL05_14590 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBL05_14905 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_07195 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RBL05_07970 cimA; (GenBank) citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RBL05_00375
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:brac00630]
D RBL05_14900 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D RBL05_14905 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RBL05_03080 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RBL05_03510 bifunctional 2-methylcitrate synthase/citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RBL05_05490 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_09300 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RBL05_09280 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RBL05_01435 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RBL05_11695 catalase K03781 katE; catalase [EC:1.11.1.6]
D RBL05_14695 catalase K03781 katE; catalase [EC:1.11.1.6]
D RBL05_02200 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBL05_06745 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_06790 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_09410 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBL05_03775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_03770 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RBL05_13885 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RBL05_15440 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RBL05_15455 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBL05_08400 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RBL05_03550 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:brac00640]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBL05_01825 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBL05_01830 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RBL05_11905 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RBL05_11900 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RBL05_11895 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_03085 pyruvate formate lyase family protein K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RBL05_10465 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RBL05_01010 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RBL05_09300 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RBL05_09280 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RBL05_01995 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBL05_02000 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBL05_15120 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RBL05_03510 bifunctional 2-methylcitrate synthase/citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RBL05_03520 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D RBL05_05490 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RBL05_03515 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D RBL05_14900 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D RBL05_14360 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:brac00650]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_15065 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RBL05_09385 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RBL05_09390 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RBL05_09375 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RBL05_09380 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RBL05_14650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RBL05_03085 pyruvate formate lyase family protein K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RBL05_08000 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBL05_07995 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:brac00660]
D RBL05_08000 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBL05_07995 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RBL05_01995 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBL05_02000 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBL05_07855 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RBL05_07850 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RBL05_07980 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:brac00562]
D RBL05_15155 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RBL05_15115 TIM barrel protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RBL05_15125 iolD; (GenBank) 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D RBL05_15150 iolB; (GenBank) 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D RBL05_15140 iolC; (GenBank) 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D RBL05_15120 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RBL05_05865 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:brac00190]
D RBL05_06090 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RBL05_06080 complex I subunit 1 family protein K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RBL05_06075 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RBL05_06060 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RBL05_06055 proton-conducting transporter membrane subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RBL05_06070 NADH-quinone oxidoreductase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D RBL05_04860 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RBL05_12800 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RBL05_09385 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RBL05_09390 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RBL05_09375 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RBL05_09380 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RBL05_05310 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RBL05_05305 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D RBL05_05315 cytochrome c K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D RBL05_05895 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RBL05_05165 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RBL05_05160 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RBL05_07720 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RBL05_07725 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RBL05_08275 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RBL05_08270 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RBL05_08260 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RBL05_08285 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RBL05_08290 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RBL05_03975 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RBL05_10760 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:brac00710]
D RBL05_05860 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBL05_05855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBL05_12035 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBL05_15610 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBL05_05890 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBL05_07405 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBL05_03380 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_13585 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_15040 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBL05_05865 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBL05_06530 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBL05_05885 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RBL05_01140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:brac00720]
D RBL05_14590 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBL05_01140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RBL05_10235 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RBL05_09385 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RBL05_09390 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RBL05_09375 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RBL05_09380 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RBL05_02000 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBL05_01995 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_09770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBL05_05490 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RBL05_11770 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBL05_09405 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RBL05_01830 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RBL05_01825 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:brac00680]
D RBL05_03610 alcohol dehydrogenase catalytic domain-containing protein K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D RBL05_09410 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBL05_04840 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBL05_01140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RBL05_12035 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBL05_15610 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBL05_02995 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBL05_03620 hxlB; (GenBank) 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D RBL05_03615 hxlA; (GenBank) 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D RBL05_01825 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBL05_01830 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBL05_14590 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBL05_01885 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RBL05_07985 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBL05_04880 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RBL05_06420 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:brac00910]
D RBL05_03550 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D RBL05_08005 nirB; (GenBank) nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D RBL05_15320 nirB; (GenBank) nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D RBL05_08010 nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D RBL05_15325 nirD; (GenBank) nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D RBL05_14275 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RBL05_06745 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_06790 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_05705 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RBL05_05710 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBL05_14555 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:brac00920]
D RBL05_16470 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RBL05_03740 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RBL05_03735 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBL05_13835 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:brac00061]
D RBL05_09300 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RBL05_06905 acyl carrier protein K02078 acpP; acyl carrier protein
D RBL05_06895 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBL05_06900 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBL05_12710 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBL05_06910 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBL05_06430 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_10450 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_14185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_15570 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_01455 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_05340 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:brac00071]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_10465 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RBL05_13940 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RBL05_01455 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_05340 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_04650 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RBL05_00900 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:brac00074]
D RBL05_09300 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RBL05_06905 acyl carrier protein K02078 acpP; acyl carrier protein
D RBL05_06895 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBL05_09280 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:brac00561]
D RBL05_07810 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RBL05_15365 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D RBL05_14360 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RBL05_13635 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RBL05_12500 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:brac00564]
D RBL05_07830 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RBL05_13645 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RBL05_02570 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RBL05_02740 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RBL05_01585 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D RBL05_12620 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:brac00600]
D RBL05_12305 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBL05_12220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:brac00592]
D RBL05_10465 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:brac01040]
D RBL05_10465 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RBL05_03335 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:brac00230]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_17010 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBL05_10360 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RBL05_10770 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBL05_10470 purL; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RBL05_10400 purS; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RBL05_10405 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBL05_01930 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RBL05_09250 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RBL05_10365 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RBL05_11940 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RBL05_10765 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBL05_05755 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RBL05_09310 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RBL05_10435 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D RBL05_03990 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RBL05_01795 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBL05_01810 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBL05_02395 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RBL05_08755 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RBL05_16230 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RBL05_16225 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RBL05_16220 2Fe-2S iron-sulfur cluster-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RBL05_01845 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RBL05_02050 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D RBL05_00670 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RBL05_05640 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RBL05_11665 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBL05_11600 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RBL05_07115 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RBL05_05105 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RBL05_04855 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RBL05_08580 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RBL05_01910 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RBL05_10730 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RBL05_00250 add; (GenBank) adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D RBL05_10515 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RBL05_05060 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D RBL05_00175 pucL; (GenBank) urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D RBL05_00595 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RBL05_00590 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RBL05_00585 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:brac00240]
D RBL05_05625 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBL05_05620 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RBL05_05605 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RBL05_05610 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RBL05_06690 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RBL05_12055 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RBL05_02560 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RBL05_02395 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RBL05_04965 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RBL05_05755 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RBL05_16340 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBL05_05600 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBL05_15300 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RBL05_11815 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RBL05_11665 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBL05_11600 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RBL05_09335 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RBL05_07365 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RBL05_13455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:brac00250]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_02720 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RBL05_01235 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RBL05_05555 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RBL05_10755 aspA; (GenBank) aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RBL05_09580 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBL05_09575 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBL05_01910 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RBL05_11940 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RBL05_05605 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RBL05_14650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RBL05_05705 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RBL05_05710 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBL05_14275 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RBL05_06745 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_06790 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_05625 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBL05_05620 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RBL05_00930 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBL05_10405 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBL05_10325 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:brac00260]
D RBL05_13040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBL05_13035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBL05_08360 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBL05_08350 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RBL05_08355 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBL05_09410 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBL05_01885 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RBL05_07985 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBL05_04880 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RBL05_06420 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RBL05_16140 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RBL05_16135 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D RBL05_03775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_03770 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RBL05_13715 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RBL05_10070 GMC family oxidoreductase N-terminal domain-containing protein K17755 codA; choline oxidase [EC:1.1.3.17]
D RBL05_10065 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RBL05_06265 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D RBL05_06270 iron-sulfur cluster-binding domain-containing protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D RBL05_06275 FAD-dependent oxidoreductase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D RBL05_13680 2Fe-2S iron-sulfur cluster-binding protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D RBL05_13690 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D RBL05_03880 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBL05_02060 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RBL05_05695 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RBL05_05690 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RBL05_05965 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RBL05_11555 ectB; (GenBank) diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RBL05_11560 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:brac00270]
D RBL05_03740 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RBL05_03735 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBL05_13835 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBL05_01560 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBL05_02430 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RBL05_05655 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RBL05_04445 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RBL05_13040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBL05_13035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBL05_08360 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBL05_08350 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RBL05_07420 PLP-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RBL05_11850 PLP-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_16470 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RBL05_03880 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBL05_07985 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBL05_04880 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:brac00280]
D RBL05_11905 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RBL05_11900 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RBL05_11895 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_09300 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RBL05_09280 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RBL05_15080 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RBL05_15120 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:brac00290]
D RBL05_02060 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RBL05_07855 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RBL05_07850 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RBL05_07980 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RBL05_08000 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBL05_07995 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RBL05_07990 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RBL05_03490 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBL05_08025 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBL05_01235 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RBL05_07195 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RBL05_07970 cimA; (GenBank) citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:brac00300]
D RBL05_08360 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBL05_13040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBL05_13035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBL05_02725 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBL05_02695 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RBL05_03105 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RBL05_09595 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RBL05_13790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RBL05_03130 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBL05_02795 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RBL05_08365 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RBL05_02200 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
C 00310 Lysine degradation [PATH:brac00310]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_13940 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:brac00220]
D RBL05_09590 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RBL05_09580 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBL05_09575 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBL05_00595 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RBL05_00590 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RBL05_00585 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RBL05_00930 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBL05_10405 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBL05_06745 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_06790 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_05625 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBL05_05620 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RBL05_14275 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_01235 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RBL05_04095 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RBL05_09605 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RBL05_09600 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RBL05_09610 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RBL05_09595 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:brac00330]
D RBL05_15300 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RBL05_13715 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RBL05_07695 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RBL05_07685 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:brac00340]
D RBL05_06515 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RBL05_06520 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RBL05_09685 priA; (GenBank) bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RBL05_05420 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RBL05_09705 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RBL05_09710 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_11930 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_08435 hisN; (GenBank) histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RBL05_16130 PHP domain-containing protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RBL05_09750 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RBL05_14200 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RBL05_14215 hutU; (GenBank) urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RBL05_14210 amidohydrolase family protein K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RBL05_14230 hutG; (GenBank) formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:brac00350]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_09710 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_11930 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_00900 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RBL05_14650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:brac00360]
D RBL05_15065 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_09710 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_11930 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_05540 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D RBL05_04650 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:brac00380]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_13940 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_11695 catalase K03781 katE; catalase [EC:1.11.1.6]
D RBL05_14695 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:brac00400]
D RBL05_00470 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RBL05_05365 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RBL05_05775 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RBL05_08425 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RBL05_05765 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RBL05_05665 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RBL05_09685 priA; (GenBank) bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RBL05_05685 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RBL05_05695 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RBL05_05690 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RBL05_05915 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RBL05_00970 pheA; (GenBank) prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_09710 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_11930 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:brac00410]
D RBL05_03865 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RBL05_04035 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RBL05_10465 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RBL05_15120 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:brac00430]
D RBL05_05555 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RBL05_01830 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RBL05_01825 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:brac00450]
D RBL05_01560 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBL05_02430 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RBL05_06845 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RBL05_14735 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RBL05_00190 molybdopterin cofactor-binding domain-containing protein K12528 xdhD; putative selenate reductase molybdopterin-binding subunit
D RBL05_02265 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RBL05_07395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:brac00460]
D RBL05_09720 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBL05_09410 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBL05_03550 acetamidase/formamidase family protein K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:brac00470]
D RBL05_10310 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBL05_07825 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBL05_00930 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBL05_10405 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBL05_08770 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RBL05_02900 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBL05_02795 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RBL05_08365 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:brac00480]
D RBL05_13565 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RBL05_03355 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RBL05_09770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBL05_01525 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RBL05_05880 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:brac00520]
D RBL05_11855 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RBL05_03530 nagE; (GenBank) N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RBL05_17015 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RBL05_07450 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBL05_07845 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBL05_09415 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBL05_00550 glycoside hydrolase family 3 N-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RBL05_12220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBL05_10335 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RBL05_10325 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBL05_03025 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBL05_15975 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RBL05_13440 alpha-L-arabinofuranosidase C-terminal domain-containing protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RBL05_13445 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RBL05_05345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBL05_06820 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_07385 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBL05_12370 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RBL05_12500 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RBL05_10735 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RBL05_12995 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6]
D RBL05_02055 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBL05_09150 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RBL05_09315 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RBL05_12920 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_13000 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_16120 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:brac00541]
D RBL05_17015 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RBL05_09190 pseB; (GenBank) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]
D RBL05_07385 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBL05_12370 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RBL05_12920 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_13000 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_16120 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_12915 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_16125 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_12910 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:brac00511]
D RBL05_12305 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBL05_12220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBL05_12510 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:brac00542]
D RBL05_08310 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:brac00550]
D RBL05_07450 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBL05_07845 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBL05_09415 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBL05_02900 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBL05_07825 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBL05_07165 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RBL05_06610 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBL05_02895 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBL05_02910 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBL05_02905 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_12545 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
C 00552 Teichoic acid biosynthesis [PATH:brac00552]
D RBL05_06610 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBL05_08310 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D RBL05_08310 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:brac00543]
D RBL05_08310 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RBL05_03740 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:brac00730]
D RBL05_05495 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RBL05_08430 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RBL05_10515 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:brac00740]
D RBL05_02665 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:brac00750]
D RBL05_13780 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RBL05_04880 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RBL05_08355 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBL05_14985 pdxS; (GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:brac00760]
D RBL05_08785 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RBL05_09310 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RBL05_05755 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RBL05_07675 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RBL05_03270 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RBL05_13075 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RBL05_03745 Sir2 family NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RBL05_04925 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RBL05_06245 N-carbamoylsarcosine amidohydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D RBL05_14650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:brac00770]
D RBL05_08000 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBL05_07995 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RBL05_07990 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RBL05_03490 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBL05_08025 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBL05_04035 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RBL05_10330 coaA; (GenBank) type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RBL05_05650 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RBL05_07765 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RBL05_03865 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:brac00780]
D RBL05_06910 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBL05_06430 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_10450 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_14185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_15570 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00785 Lipoic acid metabolism [PATH:brac00785]
D RBL05_06725 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RBL05_06730 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RBL05_02310 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_06890 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RBL05_06715 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBL05_08400 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RBL05_11905 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RBL05_11900 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RBL05_11895 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RBL05_03775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RBL05_03770 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:brac00790]
D RBL05_04000 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RBL05_10105 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RBL05_12935 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RBL05_04005 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RBL05_13460 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RBL05_02385 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RBL05_12565 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D RBL05_16575 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D RBL05_01730 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
C 00670 One carbon pool by folate [PATH:brac00670]
D RBL05_13460 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RBL05_11770 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBL05_09405 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RBL05_09410 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBL05_10770 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBL05_10765 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBL05_13455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RBL05_05655 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RBL05_06275 FAD-dependent oxidoreductase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D RBL05_03775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_03770 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RBL05_10070 GMC family oxidoreductase N-terminal domain-containing protein K17755 codA; choline oxidase [EC:1.1.3.17]
D RBL05_10065 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:brac00860]
D RBL05_07890 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_15650 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_12440 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RBL05_12435 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RBL05_12425 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RBL05_12405 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RBL05_14975 flavodoxin domain-containing protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D RBL05_12420 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RBL05_05895 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RBL05_06095 multicopper oxidase family protein K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:brac00130]
D RBL05_04885 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RBL05_10800 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RBL05_10810 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RBL05_10820 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RBL05_13730 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:brac00900]
D RBL05_05495 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RBL05_02585 dxr; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RBL05_02075 IspD/TarI family cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RBL05_04480 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RBL05_02595 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RBL05_10210 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_10250 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RBL05_07165 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RBL05_05890 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBL05_07405 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:brac00523]
D RBL05_12920 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_13000 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_16120 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_12915 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_16125 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_12910 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RBL05_12915 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_16125 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:brac00946]
D RBL05_09720 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D RBL05_00175 pucL; (GenBank) urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RBL05_16630 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:brac00332]
D RBL05_07695 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RBL05_07685 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:brac00261]
D RBL05_13040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBL05_13035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBL05_02725 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBL05_02695 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:brac00521]
D RBL05_05345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBL05_01170 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBL05_15155 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RBL05_12920 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_13000 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_16120 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_12915 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_16125 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_12910 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RBL05_05345 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:brac00525]
D RBL05_12920 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_13000 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_16120 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RBL05_12915 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RBL05_16125 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:brac00401]
D RBL05_05915 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_09710 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_11930 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RBL05_05665 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RBL05_06895 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBL05_06430 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_10450 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_14185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_15570 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RBL05_06905 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:brac00999]
D RBL05_05655 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RBL05_09720 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:brac00362]
D RBL05_15620 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RBL05_04650 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RBL05_13940 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RBL05_15065 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation [PATH:brac00364]
D RBL05_11015 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:brac00625]
D RBL05_00900 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RBL05_03610 alcohol dehydrogenase catalytic domain-containing protein K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:brac00361]
D RBL05_11015 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RBL05_15620 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:brac00623]
D RBL05_11015 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:brac00622]
D RBL05_15620 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D RBL05_15620 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D RBL05_00595 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RBL05_00590 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RBL05_00585 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:brac00626]
D RBL05_00900 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:brac03020]
D RBL05_10685 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBL05_10680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBL05_10485 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBL05_05645 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D RBL05_01515 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:brac03010]
D RBL05_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_04890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_09565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_04895 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_09560 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_00015 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_04900 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_09555 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_05750 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RBL05_02550 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RBL05_10595 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RBL05_06680 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RBL05_10535 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RBL05_14685 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RBL05_10665 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RBL05_10550 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RBL05_10345 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RBL05_10630 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RBL05_10490 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RBL05_10670 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RBL05_10495 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RBL05_10555 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBL05_16740 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBL05_02670 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RBL05_02470 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RBL05_10580 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RBL05_14675 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RBL05_10605 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RBL05_07310 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RBL05_10700 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RBL05_10610 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RBL05_10625 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RBL05_10620 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RBL05_10560 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RBL05_10545 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RBL05_14670 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RBL05_10695 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RBL05_10705 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RBL05_10690 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RBL05_10350 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RBL05_10570 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RBL05_10525 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RBL05_10590 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RBL05_10480 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RBL05_10540 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RBL05_02500 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RBL05_09655 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RBL05_07710 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RBL05_10600 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RBL05_10615 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RBL05_10565 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RBL05_04820 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RBL05_07705 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RBL05_07800 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RBL05_10585 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RBL05_10530 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RBL05_08330 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBL05_16735 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBL05_04465 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RBL05_16745 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RBL05_14780 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RBL05_09660 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RBL05_10500 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBL05_16730 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:brac00970]
D RBL05_04150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RBL05_07655 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RBL05_14865 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RBL05_08375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_08495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_10955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_12595 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_06930 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RBL05_11745 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RBL05_04695 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RBL05_05040 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RBL05_04805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RBL05_07885 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RBL05_07875 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RBL05_07880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RBL05_11740 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RBL05_02205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_05025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_05035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_11820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_08570 tRNA-His K14226 tRNA-His; tRNA His
D RBL05_14855 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RBL05_01540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_05720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_06650 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_08720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_14660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_08665 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RBL05_11535 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RBL05_06935 tRNA-Ile K14230 tRNA-Met; tRNA Met
D RBL05_08460 tRNA-Met K14230 tRNA-Met; tRNA Met
D RBL05_09435 tRNA-Met K14230 tRNA-Met; tRNA Met
D RBL05_12475 tRNA-Met K14230 tRNA-Met; tRNA Met
D RBL05_11755 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RBL05_02210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RBL05_06150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RBL05_12210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RBL05_01015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_01110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_13295 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_16435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_01295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RBL05_09440 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RBL05_11705 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RBL05_10720 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RBL05_09445 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RBL05_05020 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_05030 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_05045 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_06880 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_02270 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RBL05_07890 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_15650 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_08055 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RBL05_08050 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RBL05_08060 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RBL05_06675 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBL05_05135 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBL05_07135 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBL05_05055 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBL05_00990 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBL05_03940 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBL05_07395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBL05_06540 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RBL05_02305 valS; (GenBank) valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBL05_03855 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBL05_02365 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBL05_04040 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBL05_00845 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBL05_02615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBL05_05120 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBL05_09625 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBL05_09620 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBL05_09570 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBL05_03720 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D RBL05_07755 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:brac03060]
D RBL05_10520 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBL05_10715 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBL05_05870 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBL05_09020 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBL05_02445 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBL05_13175 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:brac04122]
D RBL05_16470 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RBL05_08175 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBL05_01730 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
C 03050 Proteasome
D RBL05_06585 arc; (GenBank) proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:brac03018]
D RBL05_04840 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBL05_02675 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RBL05_05130 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBL05_07540 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RBL05_08085 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RBL05_02730 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBL05_13430 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBL05_03640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBL05_01330 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_01770 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_10760 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RBL05_14710 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:brac03030]
D RBL05_01805 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_05335 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_02980 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBL05_12150 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBL05_07315 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBL05_14790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBL05_16215 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RBL05_07110 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RBL05_14680 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBL05_08140 helix-hairpin-helix domain-containing protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:brac03410]
D RBL05_01315 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RBL05_07750 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RBL05_08490 DNA-formamidopyrimidine glycosylase family protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RBL05_09870 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D RBL05_09400 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RBL05_12065 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RBL05_14335 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RBL05_08140 helix-hairpin-helix domain-containing protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:brac03420]
D RBL05_04830 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RBL05_03605 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBL05_05830 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBL05_05795 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RBL05_05835 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RBL05_01970 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBL05_03275 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBL05_08140 helix-hairpin-helix domain-containing protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBL05_01515 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:brac03430]
D RBL05_01970 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBL05_03275 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBL05_10215 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RBL05_14680 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBL05_02980 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBL05_14790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBL05_07315 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBL05_12150 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBL05_01805 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_05335 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_08140 helix-hairpin-helix domain-containing protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:brac03440]
D RBL05_14680 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBL05_14795 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RBL05_07170 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RBL05_13110 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D RBL05_02760 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D RBL05_05080 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RBL05_05085 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RBL05_05075 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RBL05_07795 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RBL05_02980 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBL05_14790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBL05_07315 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBL05_12150 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBL05_01805 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_05335 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining [PATH:brac03450]
D RBL05_01060 Ku protein K10979 ku; DNA end-binding protein Ku
D RBL05_01065 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:brac03250]
D RBL05_15665 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:brac02010]
D RBL05_07640 ABC transporter permease K02018 modB; molybdate transport system permease protein
D RBL05_11025 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D RBL05_13735 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RBL05_13740 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RBL05_13745 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D RBL05_13750 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RBL05_03960 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBL05_03700 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RBL05_11055 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RBL05_15180 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RBL05_15530 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RBL05_11060 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15185 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15525 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RBL05_11065 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15190 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15520 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RBL05_13060 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RBL05_13065 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D RBL05_13070 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D RBL05_13415 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBL05_13410 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D RBL05_13405 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RBL05_12130 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D RBL05_05575 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RBL05_12125 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RBL05_13495 chvE; (GenBank) sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RBL05_13485 gguB; (GenBank) sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RBL05_13490 gguA; (GenBank) sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBL05_09360 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBL05_09345 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBL05_09355 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBL05_14300 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RBL05_14310 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RBL05_14305 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RBL05_11985 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RBL05_11980 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBL05_11975 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RBL05_11970 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBL05_13770 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RBL05_13765 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D RBL05_13760 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D RBL05_13775 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RBL05_01565 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBL05_01570 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D RBL05_16400 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RBL05_16395 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RBL05_03030 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBL05_03035 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RBL05_03040 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBL05_03045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBL05_01700 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D RBL05_01705 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RBL05_12270 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D RBL05_12265 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D RBL05_12260 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D RBL05_07150 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RBL05_01090 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RBL05_01365 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBL05_13270 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBL05_09240 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D RBL05_09245 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D RBL05_14950 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D RBL05_14945 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D RBL05_12665 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBL05_12660 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBL05_07730 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:brac02060]
D RBL05_01040 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RBL05_01045 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBL05_16440 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBL05_03530 nagE; (GenBank) N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RBL05_13255 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RBL05_09850 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:brac03070]
D RBL05_10715 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBL05_05870 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBL05_10520 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBL05_09020 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBL05_02445 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBL05_04195
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:brac02020]
D RBL05_10105 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RBL05_12935 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RBL05_02105 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RBL05_02100 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RBL05_11985 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RBL05_09050 mtrA; (GenBank) MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RBL05_08805 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBL05_00765 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D RBL05_16380 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D RBL05_07745 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D RBL05_08910 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RBL05_08925 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBL05_12075 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBL05_08920 type II secretion system F family protein K12510 tadB; tight adherence protein B
D RBL05_12080 type II secretion system F family protein K12510 tadB; tight adherence protein B
D RBL05_08915 type II secretion system F family protein K12511 tadC; tight adherence protein C
D RBL05_02425 HD domain-containing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RBL05_02420 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D RBL05_06745 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_06790 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_01345 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RBL05_08160 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RBL05_01350 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RBL05_08155 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RBL05_01355 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RBL05_08150 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RBL05_12175 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RBL05_00930 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBL05_07720 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RBL05_07725 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
D RBL05_12220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 04146 Peroxisome [PATH:brac04146]
D RBL05_10465 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RBL05_01455 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_05340 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_03270 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RBL05_12620 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D RBL05_09770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBL05_11695 catalase K03781 katE; catalase [EC:1.11.1.6]
D RBL05_14695 catalase K03781 katE; catalase [EC:1.11.1.6]
D RBL05_08480 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
D RBL05_14940 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:brac02024]
D RBL05_04445 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RBL05_05665 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RBL05_00470 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RBL05_05365 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RBL05_01455 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_05340 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_12175 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RBL05_03030 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBL05_03035 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RBL05_03040 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBL05_03045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBL05_07570 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBL05_15095 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBL05_01420 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBL05_15090 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBL05_01415 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBL05_07560 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBL05_15085 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBL05_01410 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBL05_07555 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBL05_15100 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBL05_10715 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBL05_05870 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBL05_10520 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBL05_09020 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBL05_02445 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:brac02040]
D RBL05_01565 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBL05_05400 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RBL05_04840 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:brac04981]
D RBL05_13460 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RBL05_09410 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBL05_13455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D RBL05_14200 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:brac01501]
D RBL05_00550 glycoside hydrolase family 3 N-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RBL05_03030 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBL05_03035 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RBL05_03040 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBL05_03045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBL05_16630 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:brac01502]
D RBL05_07825 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBL05_10310 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBL05_02895 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBL05_02910 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D RBL05_15665 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:brac01000]
C 01001 Protein kinases [BR:brac01001]
D RBL05_02105 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RBL05_08975 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:brac01009]
D RBL05_12540 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RBL05_06420 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:brac01002]
D RBL05_01845 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RBL05_03790 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D RBL05_02225 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RBL05_05705 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RBL05_10325 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBL05_02720 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RBL05_03600 type 1 glutamine amidotransferase domain-containing protein K05520 yhbO; deglycase [EC:3.5.1.124]
D RBL05_00255 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D RBL05_03355 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RBL05_03415 M13-type metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RBL05_03130 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBL05_05500 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RBL05_06815 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RBL05_10510 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RBL05_03170 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RBL05_03995 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RBL05_01615 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RBL05_16410 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RBL05_02230 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RBL05_02235 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RBL05_02815 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RBL05_14350 PDZ domain-containing protein K08676 tri; tricorn protease [EC:3.4.21.-]
C 01003 Glycosyltransferases [BR:brac01003]
D RBL05_06465 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RBL05_03785 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D RBL05_06410 glgA; (GenBank) glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RBL05_02905 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_12545 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_08310 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:brac01005]
D RBL05_08310 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:brac01011]
D RBL05_07450 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBL05_07845 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBL05_09415 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBL05_02900 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBL05_07825 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBL05_10310 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBL05_08770 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RBL05_02895 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBL05_02910 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBL05_06610 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBL05_02905 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_12545 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_02225 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
C 01004 Lipid biosynthesis proteins [BR:brac01004]
D RBL05_06895 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBL05_06900 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBL05_12710 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBL05_06910 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBL05_06430 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_10450 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_14185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_15570 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBL05_03335 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RBL05_03905 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBL05_01455 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_05340 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:brac01006]
D RBL05_10250 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RBL05_07165 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RBL05_10820 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RBL05_05895 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:brac01007]
D RBL05_07890 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_15650 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_09570 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBL05_03720 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RBL05_03940 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBL05_00845 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBL05_07395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBL05_02365 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBL05_02305 valS; (GenBank) valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBL05_03855 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBL05_04040 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBL05_05135 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBL05_05120 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBL05_07135 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBL05_00990 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBL05_02615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBL05_05055 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBL05_06675 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBL05_09625 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBL05_09620 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBL05_10725 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBL05_01235 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RBL05_13790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RBL05_09710 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_11930 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBL05_16140 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RBL05_09595 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RBL05_05965 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RBL05_11555 ectB; (GenBank) diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RBL05_12440 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RBL05_04880 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:brac00194]
D RBL05_08260 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RBL05_08270 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RBL05_08275 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RBL05_08285 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RBL05_08290 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:brac03000]
D RBL05_10935 DeoR/GlpR family DNA-binding transcription regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D RBL05_15535 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RBL05_14935 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D RBL05_03655 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D RBL05_07155 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RBL05_11700 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D RBL05_12175 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RBL05_15820 metalloregulator ArsR/SmtB family transcription factor K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D RBL05_14895 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RBL05_02750 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D RBL05_11620 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RBL05_02010 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D RBL05_08970 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RBL05_09120 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RBL05_12195 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RBL05_03280 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RBL05_04645 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RBL05_04675 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RBL05_02090 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RBL05_02170 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RBL05_09585 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D RBL05_07260 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RBL05_05600 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBL05_02825 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RBL05_02865 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:brac03021]
D RBL05_01515 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D RBL05_10485 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBL05_10685 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBL05_10680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBL05_05645 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RBL05_05400 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D RBL05_02630 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RBL05_05595 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RBL05_10275 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:brac03019]
D RBL05_07755 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBL05_02730 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBL05_13430 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBL05_05130 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBL05_07540 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RBL05_08085 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RBL05_04840 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBL05_02675 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RBL05_03640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBL05_01330 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_01770 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_10760 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RBL05_06480 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D RBL05_08840 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D RBL05_16515 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:brac03011]
D RBL05_05750 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RBL05_02550 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RBL05_10595 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RBL05_06680 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RBL05_10535 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RBL05_14685 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RBL05_10665 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RBL05_10550 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RBL05_10345 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RBL05_10630 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RBL05_10490 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RBL05_10670 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RBL05_10495 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RBL05_10555 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBL05_16740 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBL05_02670 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RBL05_02470 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RBL05_10580 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RBL05_14675 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RBL05_10605 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RBL05_07310 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RBL05_10700 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RBL05_10610 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RBL05_10625 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RBL05_10620 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RBL05_10560 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RBL05_10545 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RBL05_14670 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RBL05_10695 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RBL05_10705 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RBL05_10690 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RBL05_10350 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RBL05_10570 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RBL05_10525 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RBL05_10590 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RBL05_10480 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RBL05_10540 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RBL05_02500 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RBL05_09655 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RBL05_07710 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RBL05_10600 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RBL05_10615 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RBL05_10565 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RBL05_07705 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RBL05_07800 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RBL05_10585 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RBL05_10530 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RBL05_08330 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBL05_16735 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBL05_04465 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RBL05_16745 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RBL05_14780 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RBL05_09660 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RBL05_10500 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBL05_16730 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBL05_04820 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RBL05_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_04890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_09565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_04895 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_09560 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_00015 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_04900 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_09555 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:brac03009]
D RBL05_07755 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBL05_07215 era; (GenBank) GTPase Era K03595 era; GTPase
D RBL05_07700 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RBL05_02630 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RBL05_05595 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RBL05_04475 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RBL05_06535 transcription antitermination factor NusB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RBL05_07790 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RBL05_14755 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RBL05_02870 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RBL05_04460 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RBL05_03945 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RBL05_02575 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RBL05_16495 rlmC; (GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D RBL05_05910 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RBL05_02955 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RBL05_02490 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RBL05_05130 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBL05_08430 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RBL05_05920 der; (GenBank) bifunctional cytidylate kinase/GTPase Der K03977 engA; GTPase
D RBL05_02805 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D RBL05_05105 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RBL05_02650 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RBL05_07665 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RBL05_07230 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RBL05_04365 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RBL05_10185 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:brac03016]
D RBL05_14710 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RBL05_07890 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_15650 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_02615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBL05_02365 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBL05_03855 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBL05_07395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBL05_00845 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBL05_04040 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBL05_05135 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBL05_06675 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBL05_07135 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBL05_05055 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBL05_00990 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBL05_03940 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBL05_02305 valS; (GenBank) valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBL05_05120 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBL05_09625 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBL05_09620 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBL05_09570 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBL05_03720 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RBL05_01895 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RBL05_07240 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RBL05_06590 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D RBL05_10355 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RBL05_02265 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RBL05_06825 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D RBL05_08760 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RBL05_03315 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D RBL05_14840 YbaK/EbsC family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RBL05_16345 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RBL05_02780 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RBL05_02495 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RBL05_06635 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RBL05_09650 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RBL05_08175 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBL05_12015 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RBL05_12320 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RBL05_03985 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RBL05_10300 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RBL05_08380 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RBL05_02675 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:brac03012]
D RBL05_02640 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RBL05_09665 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RBL05_02555 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D RBL05_10655 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RBL05_10660 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D RBL05_02280 SelB C-terminal domain-containing protein K03833 selB; selenocysteine-specific elongation factor
D RBL05_08325 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RBL05_02565 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D RBL05_04825 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RBL05_10505 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RBL05_05590 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D RBL05_08885 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:brac03110]
D RBL05_03845 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RBL05_04085 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RBL05_02240 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RBL05_03640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBL05_01330 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_01770 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_03650 DnaJ C-terminal domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D RBL05_07255 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RBL05_03645 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RBL05_01765 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D RBL05_03995 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RBL05_12220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBL05_15665 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RBL05_04725 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D RBL05_05125 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:brac04131]
D RBL05_02395 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RBL05_03000 SPFH domain-containing protein K07192 FLOT; flotillin
D RBL05_12510 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBL05_05855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBL05_01885 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RBL05_05715 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:brac04121]
D RBL05_06575 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:brac03051]
D RBL05_06585 arc; (GenBank) proteasome ATPase K13527 mpa; proteasome-associated ATPase
D RBL05_06570 pafA; (GenBank) Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D RBL05_06580 dop; (GenBank) depupylase/deamidase Dop K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:brac03032]
D RBL05_16215 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RBL05_07110 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RBL05_14680 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBL05_02980 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBL05_14790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBL05_07315 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBL05_12150 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBL05_01805 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_05335 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_08140 helix-hairpin-helix domain-containing protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBL05_05440 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBL05_14830 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBL05_05415 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBL05_14825 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBL05_12120 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:brac03036]
D RBL05_07755 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBL05_03000 SPFH domain-containing protein K07192 FLOT; flotillin
D RBL05_04050 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D RBL05_00455 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D RBL05_16455 dps; (GenBank) DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D RBL05_02735 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RBL05_02905 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_12545 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_02925 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBL05_05000 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D RBL05_02935 sepF; (GenBank) cell division protein SepF K09772 sepF; cell division inhibitor SepF
D RBL05_05905 AAA family ATPase K03496 parA; chromosome partitioning protein
D RBL05_06185 ParA family protein K03496 parA; chromosome partitioning protein
D RBL05_14750 ParA family protein K03496 parA; chromosome partitioning protein
D RBL05_14755 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RBL05_05900 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RBL05_03155 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RBL05_05850 whiA; (GenBank) DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:brac03400]
D RBL05_01315 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RBL05_01515 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D RBL05_09870 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D RBL05_07750 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RBL05_08490 DNA-formamidopyrimidine glycosylase family protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RBL05_09400 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RBL05_12065 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RBL05_14335 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RBL05_08140 helix-hairpin-helix domain-containing protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBL05_03605 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBL05_05830 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBL05_05795 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RBL05_05835 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RBL05_01970 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBL05_03275 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBL05_10685 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBL05_10680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBL05_10485 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBL05_05645 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RBL05_04830 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RBL05_10215 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RBL05_02980 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBL05_14790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBL05_07315 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBL05_12150 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBL05_01805 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_05335 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RBL05_14680 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBL05_02760 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D RBL05_05080 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RBL05_05085 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RBL05_05075 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RBL05_12735 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D RBL05_14795 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RBL05_07795 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RBL05_07170 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RBL05_13110 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D RBL05_04930 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RBL05_01880 helicase HerA-like domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RBL05_01060 Ku protein K10979 ku; DNA end-binding protein Ku
D RBL05_01065 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RBL05_05440 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBL05_14830 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBL05_05415 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBL05_14825 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBL05_12120 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RBL05_07540 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RBL05_08085 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RBL05_02815 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RBL05_06320 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RBL05_02810 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RBL05_08485 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RBL05_11665 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBL05_11600 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:brac03029]
D RBL05_02640 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RBL05_09665 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RBL05_02555 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D RBL05_10655 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RBL05_10660 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D RBL05_07215 era; (GenBank) GTPase Era K03595 era; GTPase
D RBL05_09570 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBL05_03855 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBL05_05135 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBL05_07135 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBL05_00845 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBL05_08055 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RBL05_08050 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RBL05_08060 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RBL05_14680 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBL05_03640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBL05_03645 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RBL05_01330 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_01770 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_01765 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D RBL05_03650 DnaJ C-terminal domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D RBL05_07255 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RBL05_03155 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RBL05_05895 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:brac02000]
D RBL05_12665 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBL05_12660 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBL05_00775 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBL05_02345 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBL05_12695 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBL05_12700 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBL05_15705 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBL05_15710 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBL05_07730 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RBL05_04785 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D RBL05_07640 ABC transporter permease K02018 modB; molybdate transport system permease protein
D RBL05_11025 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D RBL05_13735 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RBL05_13740 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RBL05_13745 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D RBL05_13750 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RBL05_16375 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RBL05_00205 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RBL05_03960 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBL05_03700 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RBL05_11055 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RBL05_15180 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RBL05_15530 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RBL05_11060 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15185 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15525 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RBL05_11065 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15190 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RBL05_15520 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RBL05_12130 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D RBL05_05575 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RBL05_12125 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RBL05_13415 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBL05_13410 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D RBL05_13405 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RBL05_13495 chvE; (GenBank) sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RBL05_13485 gguB; (GenBank) sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RBL05_13490 gguA; (GenBank) sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBL05_14300 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RBL05_14310 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RBL05_14305 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RBL05_13060 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RBL05_13065 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D RBL05_13070 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D RBL05_09360 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBL05_09345 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBL05_09355 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBL05_05945 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBL05_09740 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBL05_13480 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBL05_13855 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBL05_16700 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBL05_01220 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_03570 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_05950 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_09735 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_13080 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_13475 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_13850 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_16615 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_16705 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBL05_01215 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_03565 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_09730 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_13085 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_13470 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_16610 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_16710 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBL05_11985 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RBL05_11980 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBL05_11975 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RBL05_11970 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBL05_13770 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RBL05_13765 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D RBL05_13760 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D RBL05_13775 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RBL05_01565 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBL05_01570 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D RBL05_16400 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RBL05_16395 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RBL05_01120 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RBL05_12655 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RBL05_01125 ehuC; (GenBank) ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein
D RBL05_01130 ehuD; (GenBank) ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein
D RBL05_12650 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RBL05_12645 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RBL05_03030 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBL05_03035 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RBL05_03040 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBL05_03045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBL05_01700 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D RBL05_01705 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RBL05_07570 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBL05_15095 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBL05_01420 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBL05_15090 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBL05_01415 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBL05_07560 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBL05_15085 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBL05_01410 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBL05_07555 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBL05_15100 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBL05_12270 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D RBL05_12265 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D RBL05_12260 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D RBL05_14140 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D RBL05_14130 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D RBL05_14135 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D RBL05_14125 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D RBL05_06400 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RBL05_07150 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RBL05_01090 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RBL05_01375 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D RBL05_01365 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBL05_13270 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBL05_13275 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBL05_03405 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D RBL05_10380 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D RBL05_09240 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D RBL05_09245 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D RBL05_14950 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D RBL05_14945 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D RBL05_06765 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D RBL05_02325 ABC-2 family transporter protein K25154 evrC; viologen exporter family transport system permease protein
D RBL05_02330 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein
D RBL05_02320 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D RBL05_09140 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RBL05_00750 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBL05_09135 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBL05_10285 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBL05_08955 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RBL05_05545 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RBL05_06550 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RBL05_16145 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBL05_15130 MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D RBL05_06285 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RBL05_00045 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RBL05_09965 MDR family MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RBL05_04295 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RBL05_15470 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D RBL05_01040 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RBL05_01045 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBL05_16440 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBL05_03530 nagE; (GenBank) N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RBL05_09850 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RBL05_13255 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RBL05_13640 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D RBL05_01100 NAD-binding protein K10716 kch; voltage-gated potassium channel
D RBL05_02415 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RBL05_15415 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter
D RBL05_14605 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBL05_14610 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBL05_15860 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBL05_04715 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RBL05_05190 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RBL05_14500 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RBL05_09755 zupT; (GenBank) zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D RBL05_15070 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RBL05_15430 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RBL05_03500 L-lactate permease K03303 lutP; lactate permease
D RBL05_00890 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D RBL05_10060 betT; (GenBank) choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D RBL05_16545 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D RBL05_13630 putP; (GenBank) sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D RBL05_16250 cation acetate symporter K14393 actP; cation/acetate symporter
D RBL05_10900 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D RBL05_10905 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RBL05_15295 codB; (GenBank) cytosine permease K10974 codB; cytosine permease
D RBL05_16275 solute carrier family 23 protein K24206 uacT; uric acid transporter
D RBL05_04870 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RBL05_10995 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D RBL05_01345 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RBL05_08160 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RBL05_01350 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RBL05_08155 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RBL05_01355 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RBL05_08150 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RBL05_11170 arsB; (GenBank) ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D RBL05_11800 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RBL05_14095 DUF4040 family protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RBL05_14090 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RBL05_11790 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RBL05_14085 proton-conducting transporter membrane subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RBL05_14070 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RBL05_03860 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RBL05_02705 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D RBL05_06295 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D RBL05_02905 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_12545 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RBL05_00495 carbon starvation protein A K06200 cstA; carbon starvation protein
D RBL05_06115 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D RBL05_10845 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D RBL05_06525 pnuC; (GenBank) nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
C 02044 Secretion system [BR:brac02044]
D RBL05_08925 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBL05_12075 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBL05_08920 type II secretion system F family protein K12510 tadB; tight adherence protein B
D RBL05_12080 type II secretion system F family protein K12510 tadB; tight adherence protein B
D RBL05_08915 type II secretion system F family protein K12511 tadC; tight adherence protein C
D RBL05_08905 pilus assembly protein K12513 tadE; tight adherence protein E
D RBL05_08910 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RBL05_02940 YggT family protein K02221 yggT; YggT family protein
D RBL05_07330 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D RBL05_09020 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBL05_10715 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBL05_05870 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBL05_10520 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBL05_02445 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 02042 Bacterial toxins [BR:brac02042]
D RBL05_14605 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBL05_14610 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBL05_15860 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBL05_10255 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:brac02022]
D RBL05_02105 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RBL05_02100 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RBL05_09050 mtrA; (GenBank) MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RBL05_01505 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RBL05_00765 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D RBL05_16380 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D RBL05_07745 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D RBL05_08975 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D RBL05_05725 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:brac02035]
D RBL05_01565 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBL05_08910 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RBL05_08925 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBL05_12075 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:brac04812]
D RBL05_02925 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBL05_05905 AAA family ATPase K03496 parA; chromosome partitioning protein
D RBL05_06185 ParA family protein K03496 parA; chromosome partitioning protein
D RBL05_14750 ParA family protein K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:brac04147]
D RBL05_04840 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBL05_05855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBL05_05860 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBL05_05715 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBL05_15665 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RBL05_03000 SPFH domain-containing protein K07192 FLOT; flotillin
D RBL05_01330 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_01770 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBL05_03640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBL05_03025 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBL05_01795 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBL05_01810 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBL05_10655 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RBL05_07240 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RBL05_01455 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_05340 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RBL05_10455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_13945 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_14475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBL05_10515 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RBL05_09575 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBL05_09580 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBL05_10735 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RBL05_12995 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6]
D RBL05_08225 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RBL05_13635 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RBL05_06745 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_06790 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBL05_12435 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RBL05_07985 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBL05_10765 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBL05_06710 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBL05_05880 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RBL05_05865 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBL05_01885 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:brac02048]
D RBL05_00315 restriction endonuclease K07448 mrr; restriction system protein
D RBL05_02925 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBL05_07890 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBL05_15650 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:brac01504]
D RBL05_04295 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RBL05_16630 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:brac03100]
D RBL05_04150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RBL05_07655 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RBL05_14865 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RBL05_08375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_08495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_10955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_12595 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RBL05_06930 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RBL05_11745 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RBL05_04695 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RBL05_05040 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RBL05_04805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RBL05_07885 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RBL05_07875 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RBL05_07880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RBL05_11740 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RBL05_02205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_05025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_05035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_11820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RBL05_08570 tRNA-His K14226 tRNA-His; tRNA His
D RBL05_14855 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RBL05_01540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_05720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_06650 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_08720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_14660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RBL05_08665 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RBL05_11535 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RBL05_06935 tRNA-Ile K14230 tRNA-Met; tRNA Met
D RBL05_08460 tRNA-Met K14230 tRNA-Met; tRNA Met
D RBL05_09435 tRNA-Met K14230 tRNA-Met; tRNA Met
D RBL05_12475 tRNA-Met K14230 tRNA-Met; tRNA Met
D RBL05_11755 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RBL05_02210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RBL05_06150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RBL05_12210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RBL05_01015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_01110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_13295 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_16435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RBL05_01295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RBL05_09440 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RBL05_11705 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RBL05_10720 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RBL05_09445 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RBL05_05020 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_05030 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_05045 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_06880 tRNA-Val K14237 tRNA-Val; tRNA Val
D RBL05_02270 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RBL05_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_04890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_09565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RBL05_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_04895 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_09560 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RBL05_00015 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_04900 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_09555 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RBL05_06825 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D RBL05_08855 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D RBL05_13175 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RBL05_15460 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D RBL05_09630 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D RBL05_14120 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RBL05_15165 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RBL05_16595 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RBL05_07340 NAD-dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D RBL05_13610 zinc-binding dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D RBL05_15830 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D RBL05_00675 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RBL05_11750 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D RBL05_09305 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RBL05_05050 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RBL05_02040 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D RBL05_01645 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RBL05_05520 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RBL05_14380 Dyp-type peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D RBL05_01105 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RBL05_09795 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RBL05_01250 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RBL05_16260 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RBL05_10415 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RBL05_13890 antibiotic biosynthesis monooxygenase K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D RBL05_14320 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D RBL05_11160 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RBL05_03095 pflA; (GenBank) pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBL05_14480 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D RBL05_07350 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D RBL05_14425 larB; (GenBank) nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RBL05_05700 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RBL05_13590 dihydroxyacetone kinase family protein K20901 lerK; L-erythrulose 1-kinase [EC:2.7.1.209]
D RBL05_15045 dihydroxyacetone kinase family protein K20901 lerK; L-erythrulose 1-kinase [EC:2.7.1.209]
D RBL05_14595 ppsR; (GenBank) pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RBL05_11175 low molecular weight phosphatase family protein K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D RBL05_04375 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RBL05_15725 alpha/beta hydrolase family protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D RBL05_03175 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RBL05_04470 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RBL05_08245 nucS; (GenBank) endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D RBL05_02140 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RBL05_06920 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RBL05_10265 mca; (GenBank) mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D RBL05_10950 nitrilase-related carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RBL05_00225 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D RBL05_01665 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBL05_08210 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBL05_09070 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBL05_09530 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBL05_12815 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBL05_08560 orn; (GenBank) oligoribonuclease K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D RBL05_17205 triose-phosphate isomerase K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33]
D RBL05_06605 mshC; (GenBank) cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D RBL05_04670 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RBL05_06020 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RBL05_14490 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D RBL05_15110 sugar phosphate isomerase/epimerase K06605 iolH; myo-inositol catabolism protein IolH
D RBL05_04070 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RBL05_04065 lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
C 99982 Energy metabolism
D RBL05_13660 fdhD; (GenBank) formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D RBL05_06840 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D RBL05_16670 FAD-dependent oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D RBL05_11670 nrdI; (GenBank) class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D RBL05_01545 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D RBL05_12490 GNAT family protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RBL05_12350 lysylphosphatidylglycerol synthase domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D RBL05_09170 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
D RBL05_13240 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RBL05_01070 cold-shock protein K03704 cspA; cold shock protein
D RBL05_02840 cold-shock protein K03704 cspA; cold shock protein
D RBL05_12160 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D RBL05_08780 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RBL05_02215 tig; (GenBank) trigger factor K03545 tig; trigger factor
D RBL05_00600 urease accessory UreF family protein K03188 ureF; urease accessory protein
D RBL05_00605 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein
D RBL05_08865 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RBL05_11675 nrdH; (GenBank) glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D RBL05_10840 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D RBL05_16240 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RBL05_02525 YraN family protein K07460 yraN; putative endonuclease
D RBL05_04770 DNA-protecting protein DprA K04096 smf; DNA processing protein
D RBL05_05180 IS30 family transposase K07482 K07482; transposase, IS30 family
D RBL05_02190 ISL3 family transposase K07485 K07485; transposase
D RBL05_03210 ISL3 family transposase K07485 K07485; transposase
D RBL05_04360 ISL3 family transposase K07485 K07485; transposase
D RBL05_04570 ISL3 family transposase K07485 K07485; transposase
D RBL05_04755 ISL3 family transposase K07485 K07485; transposase
D RBL05_12690 ISL3 family transposase K07485 K07485; transposase
D RBL05_13400 ISL3 family transposase K07485 K07485; transposase
D RBL05_04370 IS256 family transposase K07493 K07493; putative transposase
D RBL05_05285 IS256 family transposase K07493 K07493; putative transposase
D RBL05_05990 IS256 family transposase K07493 K07493; putative transposase
D RBL05_07085 IS256 family transposase K07493 K07493; putative transposase
D RBL05_11645 IS256 family transposase K07493 K07493; putative transposase
D RBL05_07070 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RBL05_14460 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D RBL05_12785 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RBL05_07435 oligopeptide:H+ symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RBL05_01790 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RBL05_12970 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D RBL05_16690 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RBL05_13260 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBL05_11545 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RBL05_13180 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RBL05_14175 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RBL05_15495 TrkA C-terminal domain-containing protein K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D RBL05_03050 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D RBL05_07235 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RBL05_10245 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RBL05_09450 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D RBL05_17070 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RBL05_12105 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RBL05_03345 globin K06886 glbN; hemoglobin
D RBL05_05530 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RBL05_05535 sufD; (GenBank) Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RBL05_16465 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D RBL05_14540 VOC family protein K04750 phnB; PhnB protein
D RBL05_08740 histidine phosphatase family protein K15640 K15640; uncharacterized phosphatase
D RBL05_11935 phage holin family protein K08972 K08972; putative membrane protein
D RBL05_10915 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D RBL05_08705 YchJ family protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RBL05_14645 NYN domain-containing protein K06860 K06860; putative heme uptake system protein
D RBL05_02475 RNA-binding protein K06960 K06960; uncharacterized protein
D RBL05_16200 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D RBL05_06220 TSUP family transporter K07090 K07090; uncharacterized protein
D RBL05_14245 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RBL05_14100 PhoX family phosphatase K07093 K07093; uncharacterized protein
D RBL05_12205 metallophosphoesterase K07098 K07098; uncharacterized protein
D RBL05_09830 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RBL05_00060 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RBL05_10190 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D RBL05_12060 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D RBL05_12630 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D RBL05_14770 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RBL05_08465 UPF0182 family protein K09118 K09118; uncharacterized protein
D RBL05_13115 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein
D RBL05_15745 YciI family protein K09780 K09780; uncharacterized protein
D RBL05_12705 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D RBL05_13190 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D RBL05_15510 ThuA domain-containing protein K09992 K09992; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 2, 2025