+E	Replication protein	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; DNA Replication Proteins - Bradyrhizobium sp. BF49</h2>
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A<b>Eukaryotic type</b>
B  DNA Replication Initiation Factors
C    pre-RC (pre-replication complex)
C    CDK (cyclin dependent kinase)
C    DDK (Dbf-4 dependent kinase)
C    GINS complex
C    Other initiation factors
B  DNA Replication Elongation Factors
C    DNA polymerase alpha / primase complex
C    DNA polymerase epsilon complex
C    DNA polymerase delta complex
C    DNA polymerase gamma complex (mitochondrial)
C    RPA (replication protein A)
C    RFC (replication factor C)
C    RNase H
D      BF49_3347 Ribonuclease HI EC 31264	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
C    Other elongation factors
B  DNA Replication Termination Factors
C    DNA methylation enzymes
D      BF49_0785 DNAcytosine methyltransferase EC 21137	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
C    Prevention of re-replication factors
C    Telomere proteins
D      Shelterin complex
D      TERB1-TERB2-MAJIN complex
D      CST complex (animals)
D      CST complex (yeast)
D      RIF proteins
D      SIR proteins
C    Telomerase complex (animals)
D      Dyskerin complex
C    Telomerase complex (fungi)
D      Sm core complex
C    ELG1-RFC complex
C    MRN complex
C    Other termination factors
B  DNA Topoisomerases
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A<b>Prokaryotic type</b>
B  DNA Replication Initiation Factors
C    Initiation factors (bacterial)
D      BF49_6630 Histonelike DNAbinding protein	K03530 hupB; DNA-binding protein HU-beta 
D      BF49_3658 histonelike DNAbinding protein	K03530 hupB; DNA-binding protein HU-beta 
D      BF49_7118 histonelike DNAbinding protein	K03530 hupB; DNA-binding protein HU-beta 
D      BF49_6562 Integration host factor alpha subunit	K04764 ihfA; integration host factor subunit alpha 
D      BF49_0098 Integration host factor beta subunit	K05788 ihfB; integration host factor subunit beta 
D      BF49_7322 Chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein 
D      BF49_0997 Replicative DNA helicase EC 361	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] 
D      BF49_2860 DNA primase EC 277	K02316 dnaG; DNA primase [EC:2.7.7.101] 
D      BF49_6829 Singlestranded DNAbinding protein	K03111 ssb; single-strand DNA-binding protein 
C    Initiation factors (archaeal)
B  DNA Replication Elongation Factors
C    Elongation factors (bacterial)
D      DNA polymerase III holoenzyme
E        BF49_6697 DNA polymerase III alpha subunit EC 2777	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] 
E        BF49_7325 DNA polymerase III beta subunit EC 2777	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] 
E        BF49_0961 DNA polymerase III chi subunit EC 2777	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] 
E        BF49_0218 DNA polymerase III delta subunit EC 2777	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] 
E        BF49_6989 DNA polymerase III delta prime subunit EC 2777	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] 
E        BF49_3859 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        BF49_0203 DNA polymerase III epsilon subunit EC 2777	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        BF49_3736 DNA polymerase III epsilon subunit EC 2777	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        BF49_3713 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        BF49_4523 DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
E        BF49_3494 DNA polymerase III subunits gamma and tau EC 2777	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] 
D      RNase H
E        BF49_3347 Ribonuclease HI EC 31264	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        BF49_3872 Ribonuclease HII EC 31264	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
E        BF49_2270 Ribonuclease HII EC 31264	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      Other elongation factors
E        BF49_3969 DNA polymerase I EC 2777	K02335 polA; DNA polymerase I [EC:2.7.7.7] 
E        BF49_5066 DNA ligase EC 6512	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
C    Elongation factors (archaeal)
D      B-family DNA polymerases
D      D-family DNA polymerases
D      RNase H
E        BF49_3347 Ribonuclease HI EC 31264	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        BF49_3872 Ribonuclease HII EC 31264	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
E        BF49_2270 Ribonuclease HII EC 31264	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      RFC (replication factor C)
D      Other elongation factors
B  DNA Replication Termination Factors
C    Terminus site-binding protein
C    DNA methylation enzymes
C    Prevention of re-replication factors
B  DNA Topoisomerases
C    BF49_6830 DNA gyrase subunit A EC 59913	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] 
C    BF49_0004 DNA gyrase subunit B EC 59913	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] 
C    BF49_7330 DNA gyrase subunit B EC 59913	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] 
C    BF49_6521 Topoisomerase IV subunit A EC 5991	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
C    BF49_0700 Topoisomerase IV subunit B EC 5991	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
C    BF49_0268 hypothetical protein	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
C    BF49_3873 DNA topoisomerase IB poxvirus type EC 59912	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
C    BF49_6466 DNA topoisomerase I EC 59912	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
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#Last updated: November 2, 2022