+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Bradyrhizobium amphicarpaeae

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E CIT40_17600 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D CIT40_27470 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CIT40_15010 flotillin domain-containing protein K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D CIT40_17030 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D CIT40_14645 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D CIT40_17380 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CIT40_31715 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D CIT40_31265 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CIT40_15710 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D CIT40_00890 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D CIT40_11455 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D CIT40_04630 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D CIT40_15130 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D CIT40_05050 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CIT40_01165 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CIT40_03540 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CIT40_10475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CIT40_08585 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D CIT40_06950 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CIT40_16245 ScpA family protein K05896 scpA; segregation and condensation protein A D CIT40_16240 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D CIT40_24825 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D CIT40_02795 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CIT40_24885 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CIT40_32380 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CIT40_24890 hypothetical protein K03586 ftsL; cell division protein FtsL D CIT40_24830 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D CIT40_24855 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CIT40_02800 ABC transporter permease K09811 ftsX; cell division transport system permease protein D CIT40_24820 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CIT40_27440 cell division protein ZapA K09888 zapA; cell division protein ZapA D CIT40_00125 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D CIT40_14120 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CIT40_30825 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CIT40_27510 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CIT40_09150 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D CIT40_13770 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CIT40_13775 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CIT40_13780 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor C Other chromosome partitioning proteins D CIT40_18100 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D CIT40_04735 AAA family ATPase K03496 parA; chromosome partitioning protein D CIT40_24330 ParA family protein K03496 parA; chromosome partitioning protein D CIT40_31600 ParA family protein K03496 parA; chromosome partitioning protein D CIT40_32290 ParA family protein K03496 parA; chromosome partitioning protein D CIT40_04575 ParA family protein K03496 parA; chromosome partitioning protein D CIT40_22775 AAA family ATPase K03496 parA; chromosome partitioning protein D CIT40_32295 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CIT40_17575 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CIT40_14320 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CIT40_32280 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CIT40_32285 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CIT40_16140 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D CIT40_00185 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CIT40_01450 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CIT40_11570 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CIT40_29455 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024