+D Transcription factors KO #

  Transcription Factors - Bacillus selenitireducens

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Stork head/winged helix factors C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG TOX C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D Bsel_2937 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein C LysR family D Bsel_2037 transcriptional regulator, LysR family K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon C DeoR family D Bsel_0929 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Bsel_2350 Helix-turn-helix type 11 domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D Bsel_0321 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bsel_0417 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bsel_0907 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bsel_1274 global transcriptional regulator, catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bsel_2815 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bsel_0504 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D Bsel_2233 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D Bsel_0344 transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Bsel_2744 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D Bsel_2569 transcriptional regulator, GntR family K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D Bsel_0180 transcriptional regulator, GntR family K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator D Bsel_0177 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Bsel_1802 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Bsel_2169 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Bsel_3200 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator C TetR/AcrR family D Bsel_1286 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Bsel_1393 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D Bsel_2673 transcriptional regulator, TetR family K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor C Lrp/AsnC family C LuxR family C MarR family D Bsel_2487 transcriptional regulator, MarR family K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D Bsel_0428 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D Bsel_0616 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Bsel_1409 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D Bsel_0656 cobalamin B12-binding domain protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Bsel_2155 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Bsel_2226 transcriptional regulator, MerR family K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator C Fur family D Bsel_2201 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Bsel_2328 ferric uptake regulator, Fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D Bsel_2716 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D Bsel_1492 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Bsel_2849 putative transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D Bsel_2447 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D Bsel_0589 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Bsel_0330 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family C PadR family D Bsel_0010 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator C Other families D Bsel_2281 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Bsel_2103 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Bsel_0169 transcriptional regulator protein-like protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D Bsel_0050 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Bsel_0603 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Bsel_2395 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Bsel_0519 PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein D Bsel_0555 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Bsel_1737 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor B Ribbon-helix-helix C CopG family D Bsel_0531 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family D Bsel_1075 transcriptional antiterminator, BglG K03480 glcT; transcriptional antiterminator D Bsel_1406 transcriptional antiterminator, BglG K03480 glcT; transcriptional antiterminator C Others D Bsel_1839 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Bsel_0156 transcriptional regulator, CdaR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Bsel_0572 transcriptional regulator, PucR family K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Bsel_0042 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Bsel_2040 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Bsel_3316 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bsel_3318 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bsel_2339 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Bsel_2544 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator D Bsel_2262 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Bsel_2370 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Bsel_2597 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D Bsel_2693 thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D Bsel_0080 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Bsel_1112 transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator D Bsel_1006 basic membrane lipoprotein K05519 med; transcriptional activator of comK gene D Bsel_1534 basic membrane lipoprotein K05519 med; transcriptional activator of comK gene D Bsel_2137 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Bsel_1671 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Bsel_1364 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Bsel_1646 MraZ protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 21, 2025 #
Classification taken and modified from TRANSFAC 7.0