+E Ribosome biogenesis KO
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Ribosome Biogenesis - Bacillus subtilis subsp. subtilis JH642
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D BSUA_01724 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C BSUA_02706 era; GTP-binding protein Era K03595 era; GTPase
C BSUA_02978 obg; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C BSUA_01792 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C BSUA_02607 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
C BSUA_00129 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D BSUA_03194 ytzG; 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D BSUA_00053 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BSUA_01705 rsmB; RNA-binding Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BSUA_00134 ybxB; ribosomal RNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D BSUA_01630 ylbH; hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BSUA_02721 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BSUA_04355 rsmG; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BSUA_01644 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BSUA_00047 yabC; methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BSUA_02601 yqxC; methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D BSUA_04141 yxjB; ribosomal RNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D BSUA_00124 rlmB; 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BSUA_04268 yydA; rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BSUA_04074 ywbD; AdoMet-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BSUA_01706 yloN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BSUA_02601 yqxC; methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BSUA_00744 rlmCD; RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BSUA_00876 yfjO; RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BSUA_02485 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BSUA_01676 rluD; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BSUA_01264 yjbO; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BSUA_01016 yhcT; RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C BSUA_00659 rimI; ribosomal protein S18 alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C BSUA_01292 yjcK; ribosomal-protein-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C BSUA_00474 ydaF; ribosomal protein N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C BSUA_01733 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C BSUA_02722 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C BSUA_04230 yxbC; hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
B rRNA processing factors
C BSUA_01724 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C BSUA_02921 yrrK; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C BSUA_00123 mrnC; ribonuclease for 23S RNA maturation K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C BSUA_04151 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C BSUA_00501 cshA; ATP-dependent RNA helicase; cold shock K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C BSUA_02691 cshB; ATP-dependent RNA helicase; cold shock K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C BSUA_02706 era; GTP-binding protein Era K03595 era; GTPase
C BSUA_01709 cpgA; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C BSUA_02451 engA; GTP-binding protein EngA K03977 engA; GTPase
C BSUA_02978 obg; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
C BSUA_01736 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
C BSUA_01874 ynbA; GTP-binding protein protease modulator K03665 hflX; GTPase
C BSUA_02745 yqeH; GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C BSUA_03930 ywlC; ribosome maturation factor; RNA binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C BSUA_02944 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BSUA_01797 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C BSUA_01791 ylxS; hypothetical protein K09748 rimP; ribosome maturation factor RimP
C BSUA_00003 yaaA; RNA binding protein K14761 rlbA; ribosome-associated protein
C BSUA_02740 yqeL; hypothetical protein K09710 ybeB; ribosome-associated protein
C BSUA_02709 yqfG; metalloprotease K07042 ybeY; probable rRNA maturation factor
C BSUA_02743 yqeI; RNA-binding protein K07574 yhbY; RNA-binding protein
C BSUA_03761 yvyD; ribosome-associated sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
C BSUA_04346 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C BSUA_01637 ylbN; hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024