+E Transcription factors KO
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Transcription Factors - Bacillus thuringiensis serovar chinensis CT-43
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D CT43_CH3024 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D CT43_CH4854 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CT43_CH1051 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CT43_CH3681 adaA; ADA regulatory protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
C LysR family
D CT43_CH1764 LysR family transcriptional regulator K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D CT43_CH5205 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D CT43_CH3658 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CT43_CH5320 spoIIID; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CT43_CH4313 CBS domain-containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D CT43_CH4699 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CT43_CH0588 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CT43_CH0730 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D CT43_CH0550 treR; trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CT43_CH3700 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D CT43_CH3337 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D CT43_CH4060 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CT43_CH3735 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CT43_CH1233 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CT43_CH0504 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CT43_CH2029 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CT43_CH0073 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CT43_CH2660 GntR family transcriptional regulator K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC
D CT43_CH4084 acetoin transport repressor K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D CT43_CH4865 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D CT43_CH4544 TetR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D CT43_CH1729 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CT43_CH3129 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CT43_CH1754 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CT43_CH2939 transcriptional repressor Bm3R1 K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
C Lrp/AsnC family
D CT43_CH5145 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CT43_CH1292 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CT43_CH0800 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CT43_CH2709 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D CT43_CH4520 gerE; germination protein gerE K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
C MarR family
D CT43_CH3214 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D CT43_CH0989 hpr; transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D CT43_CH1267 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D CT43_CH3090 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D CT43_CH2020 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D CT43_CH4481 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CT43_CH2982 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CT43_CH1626 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D CT43_CH3642 glnR; MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D CT43_CH3286 MerR family transcriptional regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D CT43_CH1416 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D CT43_CH5412 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D CT43_CH4709 mercuric resistance operon K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D CT43_CH4099 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CT43_CH4296 Zinc-specific metalloregulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D CT43_CH0459 peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D CT43_CH3062 transcriptional regulator kipR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D CT43_CH0354 Crp family transcriptional regulator K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D CT43_CH2296 catabolite gene activator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CT43_CH5449 DNA-binding transcriptional activator YeiL K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D CT43_CH4415 RRF2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D CT43_CH3115 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CT43_CH0517 cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CT43_P281025 hypothetical protein K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D CT43_P281214 transcriptional repressor PagR K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D CT43_CH4857 ArsR family transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D CT43_P281245 Transcriptional repressor sdpR K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
D CT43_CH1212 sinR; SinR protein K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation
D CT43_CH2356 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
D CT43_CH3640 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CT43_CH4035 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CT43_CH4220 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CT43_CH3374 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CT43_CH0979 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D CT43_CH4218 manganese transport transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D CT43_CH1028 Beta-lactamase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CT43_CH1464 birA; biotin operon repressor/biotin-[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CT43_CH0520 transcriptional activator NprR K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D CT43_CH5390 transcriptional activator plcR K20391 plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
D CT43_CH1599 transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CT43_CH0887 transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CT43_CH5074 transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CT43_CH0041 purR; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CT43_CH2753 sigma-54-dependent transcriptional activator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CT43_CH1228 carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D CT43_CH0416 rocR1; arginine utilization regulatory K06714 rocR; arginine utilization regulatory protein
D CT43_CH2216 rocR2; L-lysine aminomutase regulator K06714 rocR; arginine utilization regulatory protein
D CT43_CH0237 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CT43_CH3827 codY; transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CT43_CH4499 Predicted transcriptional regulator K07726 K07726; putative transcriptional regulator
D CT43_CH2990 Cro/CI family transcriptional regulator K07727 K07727; putative transcriptional regulator
D CT43_P825203 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D CT43_CH2146 Cro/CI family transcriptional regulator K07727 K07727; putative transcriptional regulator
D CT43_P851306 transcriptional regulator K07727 K07727; putative transcriptional regulator
D CT43_CH1193 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH0379 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH0604 hypothetical protein K07729 K07729; putative transcriptional regulator
D CT43_CH0605 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH5088 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH5203 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH0672 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH3792 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH4944 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH4981 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH3256 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_CH0661 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CT43_P83030 transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D CT43_CH5289 PbsX family transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D CT43_CH0227 putative cytoplasmic protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D CT43_CH4058 glcT; BigG family transcription antiterminator K03480 glcT; transcriptional antiterminator
D CT43_CH5298 BigG family transcription antiterminator K02538 manR; mannose operon transcriptional activator
D CT43_CH0761 BigG family transcription K03491 licR; probable licABCH operon transcriptional regulator
C Others
D CT43_CH3671 putative cytoplasmic protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CT43_CH2562 transcription state transcriptional K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_P127050 transition state regulatory protein AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_CH2405 transcription state transcriptional regulator AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_CH0032 abrB; transcription state transcriptional regulator AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_CH1827 transcription state transcriptional regulator AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_P281049 Transition state regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_P83052 Transition state regulatory protein abrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CT43_CH0049 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CT43_CH5520 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CT43_CH5522 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CT43_CH3592 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CT43_CH4737 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CT43_CH0487 glycerol uptake operon antiterminator K02443 glpP; glycerol uptake operon antiterminator
D CT43_CH0975 glpP; glycerol uptake operon antiterminator K02443 glpP; glycerol uptake operon antiterminator
D CT43_CH4189 argR_1; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CT43_CH0349 argR_2; arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism
D CT43_CH4333 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D CT43_CH0703 transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CT43_CH2541 tenA; transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CT43_CH0707 tenI; transcriptional regulator TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D CT43_CH0075 ctsR; transcriptional regulator ctsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CT43_CH5168 cggR; central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D CT43_CH1755 deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D CT43_CH2965 deoxyribonucleoside regulator K11531 lsrR; lsr operon transcriptional repressor
D CT43_CH3892 pyrR; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CT43_CH5425 prespore specific transcriptional activator rsfA K06314 rsfA; prespore-specific regulator
D CT43_CH4417 prespore specific transcriptional activator rsfA K06314 rsfA; prespore-specific regulator
D CT43_CH3439 paiB1; Transcriptional repressor of sporulation and protease synthase K07734 paiB; transcriptional regulator
D CT43_CH4599 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CT43_CH3597 hutP; anti-terminator HutP K09683 hutP; hut operon positive regulatory protein
D CT43_CH5283 comK; competence transcription factor K02250 comK; competence protein ComK
D CT43_CH1071 competence transcription factor K02250 comK; competence protein ComK
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0