+E Transcription factors KO #

  Transcription Factors - Burkholderia thailandensis 2003015869

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D DR62_1123 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D DR62_4287 AraC family transcriptional regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D DR62_456 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D DR62_1296 AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D DR62_4208 transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D DR62_4308 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D DR62_80 AraC family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D DR62_4327 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D DR62_3937 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator C LysR family D DR62_1444 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_3547 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_1577 XRE family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_2520 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_3998 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_4265 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_5166 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DR62_3849 LysR family transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D DR62_245 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D DR62_5233 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D DR62_2879 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D DR62_586 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D DR62_4665 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D DR62_4920 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D DR62_08065 transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D DR62_664 transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D DR62_2025 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D DR62_2761 transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D DR62_5138 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D DR62_4647 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D DR62_4900 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D DR62_4628 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DR62_1828 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DR62_2424 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DR62_642 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D DR62_4107 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D DR62_4062 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D DR62_5384 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D DR62_5395 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes C DeoR family D DR62_1801 DeoR faimly transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D DR62_3428 AraC family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D DR62_4329 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DR62_2765 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DR62_2903 AraC family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DR62_2937 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D DR62_3443 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor C GntR family D DR62_32 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D DR62_1951 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DR62_1640 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DR62_5615 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DR62_3872 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DR62_4599 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DR62_663 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DR62_3927 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DR62_4140 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DR62_5598 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DR62_4372 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DR62_4636 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DR62_3758 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D DR62_3895 BetI family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D DR62_1874 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D DR62_1351 dihydroorotate oxidase K05501 slmA; TetR/AcrR family transcriptional regulator D DR62_4644 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D DR62_4148 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DR62_3255 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DR62_2790 TetR family transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor D DR62_5210 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family D DR62_1503 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_194 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_1012 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_5626 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_5763 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_3512 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_1042 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_1179 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_1911 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_4042 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DR62_2384 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D DR62_1513 AsnC family transcriptional regulator K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon C LuxR family D DR62_3487 LuxR family transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D DR62_4128 LuxR family transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D DR62_5759 LuxR family transcriptional regulator K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR C MarR family D DR62_5517 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D DR62_4556 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D DR62_4059 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D DR62_3021 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon C Fur family D DR62_659 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DR62_1886 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D DR62_4643 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DR62_3746 4-hydroxyphenylpyruvate dioxygenase K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DR62_2378 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis C CRP/FNR family D DR62_1944 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DR62_4921 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DR62_5371 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DR62_3722 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DR62_52 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D DR62_3335 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D DR62_3032 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D DR62_64 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D DR62_3946 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family D DR62_1244 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D DR62_649 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D DR62_1564 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DR62_615 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D DR62_4709 Fis family transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D DR62_5737 gluconate transporter K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DR62_4276 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DR62_5119 transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D DR62_5509 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D DR62_842 DNA-binding protein K07726 K07726; putative transcriptional regulator D DR62_2951 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D DR62_1145 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D DR62_2919 FMN-binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D DR62_3096 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D DR62_4885 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DR62_4507 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DR62_1161 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DR62_565 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor D DR62_1247 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D DR62_3480 elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase D DR62_417 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DR62_2013 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D DR62_06115 transcriptional regulator K07733 alpA; prophage regulatory protein D DR62_2154 transcriptional regulator K07733 alpA; prophage regulatory protein D DR62_2421 transcriptional regulator K07734 paiB; transcriptional regulator D DR62_419 hypothetical protein K07735 algH; putative transcriptional regulator D DR62_1359 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D DR62_482 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D DR62_755 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0