+D #

  Transfer RNA Biogenesis - Bremerella volcania

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D Pan97_02290 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Pan97_14700 hypothetical protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] C CCA adding factors B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex D Pan97_36220 rtcB; RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D Pan97_13070 gltX; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pan97_18130 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pan97_35800 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pan97_30350 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pan97_50020 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pan97_02980 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pan97_02680 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pan97_36440 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D Pan97_13170 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pan97_43340 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Pan97_13030 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Pan97_44890 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pan97_40440 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pan97_17840 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pan97_30560 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pan97_01120 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pan97_44970 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pan97_44980 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pan97_42280 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pan97_34260 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D Pan97_17180 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D Pan97_04540 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D Pan97_09140 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] C Psudouridine synthases D Pan97_17250 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Pan97_30610 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D Pan97_33160 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pan97_41180 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pan97_53840 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D Pan97_33350 miaA; IPP transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Pan97_01180 mnmE_1; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Pan97_30870 mnmE_2; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Pan97_09500 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D Pan97_23550 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Pan97_36820 RNaseP_bact_a K01978 rnpB; M1 RNA B 3'processing and CCA adding factors C 3'processing factors D Pan97_02290 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Pan97_50530 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Pan97_21610 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D Pan97_14700 hypothetical protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] C CCA adding factors B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases D Pan97_36220 rtcB; RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] C Other tRNA splicing factors D Pan97_13150 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Pan97_26870 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] B tRNA transport factors C tRNA export factors D Pan97_20100 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D Pan97_30350 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pan97_18130 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D Pan97_42280 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pan97_34260 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Pan97_44890 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pan97_35800 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pan97_02680 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pan97_13170 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pan97_30560 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pan97_50020 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pan97_40440 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pan97_36440 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pan97_17840 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pan97_13070 gltX; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pan97_02980 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pan97_44970 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pan97_44980 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pan97_01120 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pan97_43340 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] C Trans-editing factors D Pan97_17180 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] B tRNA modification factors C Deaminases D Pan97_41150 tadA_1; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D Pan97_22000 dusC; tRNA-dihydrouridine synthase C K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Pan97_22050 dus; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] C Methylthiotransferases D Pan97_51960 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Pan97_40410 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] C Methyltransferases D Pan97_31710 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Pan97_48580 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Pan97_09140 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Pan97_43430 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Pan97_01180 mnmE_1; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Pan97_30870 mnmE_2; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Pan97_25610 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Pan97_18610 tsnR; 23S rRNA (adenosine(1067)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family C Psudouridine synthases D Pan97_17250 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Pan97_30610 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D Pan97_21830 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Pan97_33150 erpA; Iron-sulfur cluster insertion protein ErpA K13628 iscA; iron-sulfur cluster assembly protein D Pan97_33160 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pan97_41180 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pan97_53840 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pan97_40880 putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D Pan97_09500 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Pan97_33350 miaA; IPP transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Pan97_12450 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Pan97_33180 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Pan97_50930 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Pan97_07920 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pan97_23500 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pan97_27230 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pan97_09020 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Pan97_09010 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Pan97_22020 queG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Pan97_19040 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Pan97_19170 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Pan97_30830 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Pan97_36270 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Pan97_23390 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE B tRNA degradation factors C Pan97_18170 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C Pan97_15170 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024