+E	Ribosome biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Ribosome Biogenesis - Candidatus Bandiella euplotis</h2>
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A<b>Eukaryotic type</b>
B  Sno RNPs
C    Box C/D snoRNPs
C    Box H/ACA snoRNPs
B  90S particles
C    U3 small nucleolar RNA-associated proteins
C    Helicases
C    GTPase
C    RNase
D      Bandiella_00581 Ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
C    Kinase
C    Other 90S particles
B  Pre-40S particles
C    Kinases
C    Export and cytoplasmic maturation factors
C    Other pre-40S particles
B  Pre-60S particles
C    Helicases
C    GTPases
C    RNases
D      RNase MRP
C    Kinases
C    Export and cytoplasmic maturation factors
C    5-FMC complex
C    Ribosome quality control proteins
C    Other pre-60S particles
B  Other ribosome biogenesis factors
C    Bandiella_00582 GTPase Era	K03595 era; GTPase 
C    Bandiella_00334 GTPase ObgE	K03979 obgE; GTPase [EC:3.6.5.-] 
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A<b>Prokaryotic type</b>
B  Sno RNPs
C    Box C/D snoRNPs
C    Box H/ACA snoRNPs
B  rRNA transcription factors
C    Bandiella_00872 RNA polymerase-binding transcription factor DksA	K06204 dksA; RNA polymerase-binding transcription factor 
C    Bandiella_01475 Transcription termination/antitermination protein NusA	K02600 nusA; transcription termination/antitermination protein NusA 
C    Bandiella_01370 Transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB 
C    Bandiella_00107 Transcription termination/antitermination factor NusG	K02601 nusG; transcription termination/antitermination protein NusG 
B  rRNA modification factors
C    16S rRNA modification factors
D      Bandiella_00669 Ribosomal RNA small subunit methyltransferase A	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] 
D      Bandiella_01275 Ribosomal RNA small subunit methyltransferase D	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] 
D      Bandiella_00644 Ribosomal RNA small subunit methyltransferase E	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] 
D      Bandiella_01205 Ribosomal RNA small subunit methyltransferase H	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] 
C    23S rRNA modification factors
D      Bandiella_01421 RNA methyltransferase family protein	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] 
D      Bandiella_00210 Ribosomal RNA large subunit methyltransferase E	K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] 
D      Bandiella_01139 RsuA superfamily rRNA pseudouridine synthase	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] 
D      Bandiella_01354 RluA family pseudouridine synthase	K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] 
D      Bandiella_00639 RluA family ribosomal large subunit pseudouridine synthase	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] 
B  ribosomal protein modification factors
C    Bandiella_00949 Ribosome maturation factor RimM	K02860 rimM; 16S rRNA processing protein RimM 
B  rRNA processing factors
C    Bandiella_00581 Ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
C    Bandiella_01331 Rne/Rng family ribonuclease	K08300 rne; ribonuclease E [EC:3.1.26.12] 
C    Bandiella_00724 Putative Holliday junction resolvase RuvX domain protein	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] 
B  rRNA helicases
B  GTPases
C    Bandiella_00582 GTPase Era	K03595 era; GTPase 
C    Bandiella_00458 GTPase Der	K03977 engA; GTPase 
C    Bandiella_00334 GTPase ObgE	K03979 obgE; GTPase [EC:3.6.5.-] 
B  Other maturation factors
C    Bandiella_01086 Putative YrdC/YwlC family threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
C    Bandiella_00225 Putative GTP pyrophosphokinase N-terminal domain protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] 
C    Bandiella_01262 Ribosome-binding factor A	K02834 rbfA; ribosome-binding factor A 
C    Bandiella_01474 Ribosome maturation factor RimP	K09748 rimP; ribosome maturation factor RimP 
C    Bandiella_00829 Ribosomal silencing factor RsfS	K09710 ybeB; ribosome-associated protein 
C    Bandiella_00054 Endoribonuclease YbeY	K07042 ybeY; probable rRNA maturation factor 
C    Bandiella_00336 Redox-regulated ATPase YchF	K06942 ychF; ribosome-binding ATPase 
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A<b>Related small nucleolar RNAs</b>
B  Box C/D snoRNAs
C    SnoRNAs involved in processing reactions
C    SnoRNAs act as guides for 2'-O-ribose methylation
B  Box H/ACA snoRNAs
C    SnoRNAs involved in processing reactions
C    SnoRNAs act as guides for pseudouridynation
B  Other snoRNA
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#Last updated: August 22, 2025