+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Bacillus mycoides WSBC 10204
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D bwei_1662 DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D bwei_1705 dcm3; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D bwei_4082 dcm2; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E bwei_1108 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
D bwei_5048 SPFH domain / Band 7 family protein K07192 FLOT; flotillin
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D bwei_1237 hup1; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D bwei_2658 hupA; DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D bwei_3482 hup2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
C Other nucleoid associated proteins
D bwei_4282 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D bwei_4716 dps2; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D bwei_3003 dps1; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D bwei_3362 hfq1; RNA chaperone Hfq K03666 hfq; host factor-I protein
D bwei_5763 hfq3; RNA chaperone Hfq K03666 hfq; host factor-I protein
D bwei_1253 hfq2; RNA chaperone Hfq K03666 hfq; host factor-I protein
D bwei_3636 lrpC; HTH-type transcriptional regulator lrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D bwei_4680 lrpB; Transcriptional regulator, Lrp/AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D bwei_4171 Transcriptional regulator, AsnC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D bwei_1109 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D bwei_0893 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D bwei_0894 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
C Divisome proteins
D bwei_1047 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D bwei_5687 divIC1; Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage K13052 divIC; cell division protein DivIC
D bwei_2177 divIC2; septum formation initiator family protein K13052 divIC; cell division protein DivIC
D bwei_2470 divIC3; Cell division protein DivIC, septum formation initiator K13052 divIC; cell division protein DivIC
D bwei_4609 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D bwei_5731 spoIIIE; ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D bwei_2834 essC; type VII secretion protein EssC / yukA K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D bwei_0200 sftA; DNA translocase sftA/spoIIIE/ytpT K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D bwei_1163 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D bwei_1037 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D bwei_1046 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D bwei_1043 ftsW5; Cell division protein, FtsW/RodA/SpoVE K03588 ftsW; cell division protein FtsW
D bwei_1006 ftsW3; Cell division protein,FtsW/RodA/SpoVE K03588 ftsW; cell division protein FtsW
D bwei_4610 ftsX; cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D bwei_1048 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D bwei_0342 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D bwei_3208 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_4110 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_2787 cwlC1; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_5650 cwlD1; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_1876 cwlD2; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_3164 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_3328 amiB; S-layer protein and N-acetylmuramoyl-L-alanine amidase fusion protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D bwei_0199 lytC; N-acetylmuramoyl-L-alanine amidase (Major autolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C Inhibitors of FtsZ assembly
D bwei_0242 ezrA; septation ring formation regulator, EzrA K06286 ezrA; septation ring formation regulator
D bwei_0491 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D bwei_0492 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D bwei_1058 divIVA; septum site-determining protein divIVA K04074 divIVA; cell division initiation protein
D bwei_1055 sepF; cell division protein sepF K09772 sepF; cell division inhibitor SepF
C Other chromosome partitioning proteins
D bwei_0488 cell rod shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D bwei_4506 mreB; cell rod shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D bwei_0489 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D bwei_0490 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D bwei_0787 ftsW4; Cell division protein, FtsW/RodA/SpoVE K05837 rodA; rod shape determining protein RodA
D bwei_3797 ftsW1; Cell division protein, FtsW/RodA/SpoVE K05837 rodA; rod shape determining protein RodA
D bwei_4292 soj; sporulation initiation inhibitor protein soj, Chromosome partitioning protein parA K03496 parA; chromosome partitioning protein
D bwei_4291 noc; nucleoid occlusion protein, noc/yyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D bwei_4293 spo0J; stage 0 sporulation protein J, ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D bwei_1359 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D bwei_1358 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D bwei_4289 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D bwei_4290 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D bwei_1125 trmFO; m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D bwei_1126 xerD; tyrosine recombinase XerD K03733 xerC; integrase/recombinase XerC
D bwei_0860 xerD2; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D bwei_2083 phage integrase, N-terminal SAM-like domain protein K04763 xerD; integrase/recombinase XerD
D bwei_5345 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D bwei_2757 racA; Chromosome-anchoring protein racA K11686 racA; chromosome-anchoring protein RacA
D bwei_5683 mazG; Tetrapyrrole methylase family protein/nucleoside triphosphate pyrophosphohydrolase MazG K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D bwei_5651 mrp; ATP-binding protein Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D bwei_3314 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D bwei_0412 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D bwei_4643 whiA; Putative sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024