+D GENES KO #

  KEGG Orthology (KO) - Corynebacterium afermentans subsp. lipophilum

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cafe00010] D CAFEL_07515 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CAFEL_03235 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAFEL_04770 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CAFEL_03875 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CAFEL_09730 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAFEL_05960 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CAFEL_03540 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAFEL_05970 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAFEL_05965 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CAFEL_01090 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CAFEL_08045 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAFEL_07190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAFEL_07795 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CAFEL_07605 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_04415 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CAFEL_03570 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09765 adh2; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09855 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_06440 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CAFEL_10095 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cafe00020] D CAFEL_03130 gltA1; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D CAFEL_05805 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CAFEL_02240 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CAFEL_04345 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_09070 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CAFEL_01005 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAFEL_01010 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAFEL_01000 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAFEL_03865 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CAFEL_08510 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CAFEL_06915 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CAFEL_02350 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CAFEL_10095 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CAFEL_07795 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CAFEL_07605 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cafe00030] D CAFEL_03235 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAFEL_05940 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CAFEL_05950 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CAFEL_05515 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CAFEL_06020 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CAFEL_05930 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CAFEL_05935 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CAFEL_08620 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CAFEL_08315 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_03695 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CAFEL_09730 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAFEL_03875 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CAFEL_04770 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cafe00040] D CAFEL_09995 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CAFEL_03370 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAFEL_06020 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cafe00051] D CAFEL_01735 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CAFEL_02515 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CAFEL_02505 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CAFEL_02485 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CAFEL_04770 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CAFEL_03875 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CAFEL_09730 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAFEL_05960 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CAFEL_07610 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D CAFEL_08620 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:cafe00052] D CAFEL_07735 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CAFEL_01240 lnpD; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAFEL_06490 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAFEL_03370 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_07515 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CAFEL_10235 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CAFEL_04770 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CAFEL_04295 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] C 00053 Ascorbate and aldarate metabolism D CAFEL_09995 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:cafe00500] D CAFEL_04295 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CAFEL_03370 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAFEL_04305 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CAFEL_04660 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CAFEL_07165 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CAFEL_08230 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CAFEL_04665 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CAFEL_04300 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CAFEL_07245 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D CAFEL_07260 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D CAFEL_09255 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CAFEL_09265 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_07515 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CAFEL_03235 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAFEL_01735 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cafe00520] D CAFEL_10040 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CAFEL_06580 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CAFEL_01735 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CAFEL_01730 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CAFEL_01950 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CAFEL_03700 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CAFEL_09010 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CAFEL_01050 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CAFEL_08010 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CAFEL_07990 wbpA2; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CAFEL_07985 wbpA1; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D CAFEL_07515 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CAFEL_06440 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_03370 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAFEL_09995 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CAFEL_03555 wbiB; dTDP-L-rhamnose 4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D CAFEL_07735 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CAFEL_01240 lnpD; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAFEL_06490 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAFEL_10235 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CAFEL_03235 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAFEL_02515 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CAFEL_02505 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CAFEL_02485 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CAFEL_04305 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cafe00620] D CAFEL_07795 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CAFEL_07605 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_05540 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CAFEL_03570 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09765 adh2; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09695 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAFEL_09700 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CAFEL_07190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAFEL_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAFEL_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAFEL_02365 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_03495 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_07105 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CAFEL_09855 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CAFEL_09070 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CAFEL_04415 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CAFEL_09820 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CAFEL_03065 putative FAD-linked oxidoreductase K18930 dld; D-lactate dehydrogenase D CAFEL_06225 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CAFEL_02905 cfiA; 2-oxoglutarate carboxylase large subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D CAFEL_02350 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CAFEL_08510 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CAFEL_06915 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CAFEL_03865 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CAFEL_10095 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_00660 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cafe00630] D CAFEL_08510 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CAFEL_03130 gltA1; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D CAFEL_05805 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_02365 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_03495 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_02415 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CAFEL_02410 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CAFEL_02425 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] D CAFEL_07765 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CAFEL_07655 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07720 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_03825 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAFEL_07615 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CAFEL_07620 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_07625 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CAFEL_07145 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CAFEL_04345 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] C 00640 Propanoate metabolism [PATH:cafe00640] D CAFEL_09695 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAFEL_09700 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_05540 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CAFEL_10775 acuI; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CAFEL_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAFEL_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAFEL_02365 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_03495 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_02415 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CAFEL_02410 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CAFEL_04415 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CAFEL_04555 gldA; Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:cafe00650] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_05435 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CAFEL_01005 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAFEL_01010 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAFEL_01000 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAFEL_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_06785 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_07825 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_09070 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CAFEL_05540 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CAFEL_02990 scoA; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CAFEL_02985 scoB; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CAFEL_03490 yjmD; putative zinc-type alcohol dehydrogenase-like protein YjmD K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D CAFEL_04845 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAFEL_04850 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAFEL_02440 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CAFEL_08180 gutB; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:cafe00660] D CAFEL_04845 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAFEL_04850 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAFEL_02440 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CAFEL_05000 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CAFEL_05005 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CAFEL_04880 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cafe00562] D CAFEL_07210 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CAFEL_05960 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cafe00190] D CAFEL_05545 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CAFEL_01005 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CAFEL_01010 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CAFEL_01000 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CAFEL_07540 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CAFEL_07535 qcrB; Menaquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D CAFEL_07545 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D CAFEL_05925 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CAFEL_07555 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D CAFEL_07550 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CAFEL_08860 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CAFEL_07560 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CAFEL_05915 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CAFEL_04615 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CAFEL_04625 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CAFEL_04620 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CAFEL_04610 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CAFEL_04630 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CAFEL_04595 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAFEL_04605 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CAFEL_04600 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CAFEL_09460 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CAFEL_03515 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CAFEL_09555 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cafe00680] D CAFEL_03825 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAFEL_08045 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAFEL_08510 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CAFEL_07610 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D CAFEL_09730 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CAFEL_03875 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CAFEL_04770 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CAFEL_09695 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CAFEL_09700 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CAFEL_01090 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:cafe00910] D CAFEL_03650 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CAFEL_07140 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CAFEL_07655 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07720 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_09335 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cafe00920] D CAFEL_09885 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAFEL_09890 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAFEL_03195 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CAFEL_06830 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CAFEL_09895 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CAFEL_09905 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D CAFEL_02370 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAFEL_09755 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAFEL_09025 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAFEL_09020 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CAFEL_02225 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CAFEL_08635 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cafe00061] D CAFEL_02910 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CAFEL_02915 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CAFEL_02365 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_03495 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_07805 acyl carrier protein K02078 acpP; acyl carrier protein D CAFEL_01055 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_01060 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_08225 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cafe00071] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_10365 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CAFEL_01055 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_01060 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_08225 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_03570 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09765 adh2; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cafe00561] D CAFEL_07145 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CAFEL_07610 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D CAFEL_04555 gldA; Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CAFEL_10245 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CAFEL_05330 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D CAFEL_07510 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAFEL_04930 fbpC1; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CAFEL_10170 fbpC3; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CAFEL_03555 wbiB; dTDP-L-rhamnose 4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] C 00564 Glycerophospholipid metabolism [PATH:cafe00564] D CAFEL_05025 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CAFEL_07510 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CAFEL_10415 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CAFEL_10420 glpQ2; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CAFEL_06975 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CAFEL_06305 pgsA1; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CAFEL_06695 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CAFEL_09645 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cafe00230] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_03695 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CAFEL_09140 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CAFEL_09220 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CAFEL_03270 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CAFEL_09705 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CAFEL_09155 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CAFEL_09165 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CAFEL_09160 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CAFEL_09135 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CAFEL_02445 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CAFEL_02450 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CAFEL_09205 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CAFEL_09215 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CAFEL_03275 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CAFEL_06250 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CAFEL_04040 yhcR1; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_06240 yhcR2; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_07810 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_07390 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CAFEL_04380 rihA1; Pyrimidine-specific ribonucleoside hydrolase RihA K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D CAFEL_07850 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CAFEL_09435 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CAFEL_02050 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CAFEL_02055 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CAFEL_08480 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CAFEL_08810 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CAFEL_02065 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CAFEL_05815 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CAFEL_06075 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CAFEL_08875 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CAFEL_08865 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CAFEL_08120 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D CAFEL_06245 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CAFEL_01110 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CAFEL_08020 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CAFEL_00880 cyaB; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CAFEL_09710 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CAFEL_00290 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CAFEL_01845 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CAFEL_06310 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CAFEL_09885 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAFEL_09890 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:cafe00240] D CAFEL_06090 carB2; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CAFEL_06105 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CAFEL_06100 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CAFEL_05720 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CAFEL_09745 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CAFEL_06085 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CAFEL_06990 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CAFEL_08480 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CAFEL_02405 yceF; Maf-like protein YceF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CAFEL_05400 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CAFEL_04040 yhcR1; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_06240 yhcR2; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_07810 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_07850 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CAFEL_02320 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CAFEL_06110 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CAFEL_10005 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CAFEL_08875 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CAFEL_08865 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CAFEL_02530 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CAFEL_06425 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CAFEL_03190 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CAFEL_06740 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cafe00250] D CAFEL_07350 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CAFEL_06370 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CAFEL_07565 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CAFEL_09980 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAFEL_05690 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CAFEL_05275 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CAFEL_05280 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CAFEL_09710 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CAFEL_09215 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CAFEL_06105 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CAFEL_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_06785 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_07825 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_07140 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CAFEL_06530 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CAFEL_07655 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07720 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_06090 carB2; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CAFEL_09160 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CAFEL_01730 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CAFEL_09140 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cafe00260] D CAFEL_00670 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAFEL_00675 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAFEL_04545 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CAFEL_04550 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CAFEL_07700 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CAFEL_03825 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAFEL_07145 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CAFEL_01090 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CAFEL_07615 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CAFEL_07620 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_07625 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CAFEL_06215 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CAFEL_07285 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CAFEL_11040 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CAFEL_11035 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cafe00270] D CAFEL_09025 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CAFEL_09020 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CAFEL_08275 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CAFEL_00140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CAFEL_06060 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CAFEL_09870 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CAFEL_07390 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CAFEL_03775 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CAFEL_00670 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAFEL_00675 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAFEL_04545 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CAFEL_02225 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CAFEL_08635 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CAFEL_02230 metZ; O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CAFEL_07590 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAFEL_02370 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAFEL_09755 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAFEL_04415 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CAFEL_08510 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CAFEL_06215 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:cafe00280] D CAFEL_07590 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_02365 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_03495 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CAFEL_02415 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CAFEL_02410 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CAFEL_01205 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CAFEL_02990 scoA; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CAFEL_02985 scoB; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cafe00290] D CAFEL_07285 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CAFEL_05000 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CAFEL_05005 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CAFEL_04880 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CAFEL_04845 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAFEL_04850 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAFEL_04855 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CAFEL_04835 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CAFEL_07590 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CAFEL_09980 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAFEL_00660 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cafe00300] D CAFEL_04545 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CAFEL_00670 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAFEL_00675 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAFEL_06735 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CAFEL_06745 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CAFEL_04240 dapD1; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CAFEL_04255 dapD2; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CAFEL_05260 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CAFEL_04260 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CAFEL_06600 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CAFEL_04540 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CAFEL_07435 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CAFEL_07430 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cafe00310] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_10365 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_06785 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_07825 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:cafe00220] D CAFEL_05265 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CAFEL_05275 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CAFEL_05280 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CAFEL_09160 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CAFEL_07655 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07720 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07140 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CAFEL_09980 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAFEL_05250 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CAFEL_09635 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D CAFEL_05255 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CAFEL_05245 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CAFEL_05260 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cafe00330] D CAFEL_01120 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CAFEL_06530 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CAFEL_08450 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CAFEL_08435 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:cafe00340] D CAFEL_07215 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CAFEL_03680 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAFEL_04420 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CAFEL_10360 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CAFEL_10380 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CAFEL_10385 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CAFEL_10350 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] C 00350 Tyrosine metabolism [PATH:cafe00350] D CAFEL_03680 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAFEL_03570 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09765 adh2; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_06785 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_07825 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_03660 Ureidoglycolate lyase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:cafe00360] D CAFEL_03690 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CAFEL_05435 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CAFEL_03680 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAFEL_06525 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00380 Tryptophan metabolism [PATH:cafe00380] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_10365 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_02425 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cafe00400] D CAFEL_07495 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CAFEL_06155 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CAFEL_06150 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CAFEL_06160 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CAFEL_02585 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CAFEL_06165 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CAFEL_11015 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CAFEL_11020 phnB; Anthranilate synthase component 2, pyocyanine specific K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CAFEL_11025 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CAFEL_07200 trpC1; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CAFEL_11030 trpC2; Tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CAFEL_11040 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CAFEL_11035 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CAFEL_03245 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CAFEL_00550 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CAFEL_10290 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D CAFEL_03680 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D CAFEL_09390 panC1; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CAFEL_09775 panC2; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:cafe00430] D CAFEL_09700 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CAFEL_09695 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cafe00450] D CAFEL_08635 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CAFEL_08275 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CAFEL_00140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CAFEL_05875 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CAFEL_11110 trxB2; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CAFEL_09885 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAFEL_09890 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAFEL_03430 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cafe00460] D CAFEL_07350 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CAFEL_03825 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cafe00470] D CAFEL_01980 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CAFEL_05030 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAFEL_09160 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CAFEL_08825 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3] D CAFEL_07420 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CAFEL_06600 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CAFEL_04540 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CAFEL_06525 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:cafe00480] D CAFEL_03505 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CAFEL_09610 ybdK2; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CAFEL_07595 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CAFEL_08630 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CAFEL_02240 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CAFEL_05515 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CAFEL_05940 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:cafe00515] D CAFEL_03415 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:cafe00514] D CAFEL_03415 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cafe00542] D CAFEL_04585 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cafe00541] D CAFEL_03370 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CAFEL_01240 lnpD; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAFEL_06490 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CAFEL_10235 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CAFEL_09995 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CAFEL_00945 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAFEL_00955 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CAFEL_00950 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D CAFEL_02515 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CAFEL_02505 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CAFEL_03700 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CAFEL_08010 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CAFEL_07990 wbpA2; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CAFEL_07985 wbpA1; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] C 00550 Peptidoglycan biosynthesis [PATH:cafe00550] D CAFEL_09010 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CAFEL_01050 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CAFEL_07405 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CAFEL_07420 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CAFEL_07435 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CAFEL_05030 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAFEL_07430 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CAFEL_08155 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CAFEL_05710 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAFEL_07425 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CAFEL_07410 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CAFEL_07440 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CAFEL_00180 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D CAFEL_02295 dacB1; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAFEL_09455 dacB2; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CAFEL_00645 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CAFEL_00640 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cafe00552] D CAFEL_05710 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAFEL_04585 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cafe00543] D CAFEL_04585 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CAFEL_09025 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cafe00730] D CAFEL_02890 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CAFEL_01740 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CAFEL_04685 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAFEL_02840 thiO; Glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D CAFEL_06410 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CAFEL_02830 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CAFEL_02845 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CAFEL_05040 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CAFEL_02580 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CAFEL_01845 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cafe00740] D CAFEL_06005 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CAFEL_06015 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CAFEL_06000 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CAFEL_06010 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CAFEL_06805 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:cafe00750] D CAFEL_04110 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CAFEL_08175 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CAFEL_07700 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CAFEL_05645 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cafe00760] D CAFEL_04795 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CAFEL_04790 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CAFEL_08845 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CAFEL_04040 yhcR1; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_06240 yhcR2; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_07810 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CAFEL_08420 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CAFEL_02665 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CAFEL_08895 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CAFEL_06690 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CAFEL_08760 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CAFEL_06885 cobB2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CAFEL_05345 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CAFEL_02940 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_06785 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CAFEL_07825 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:cafe00770] D CAFEL_04845 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CAFEL_04850 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CAFEL_04855 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CAFEL_04835 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CAFEL_09770 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CAFEL_09390 panC1; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CAFEL_09775 panC2; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CAFEL_03820 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CAFEL_06065 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CAFEL_05065 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CAFEL_05150 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CAFEL_07590 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:cafe00780] D CAFEL_06640 bioW; 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14] D CAFEL_06635 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CAFEL_03615 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CAFEL_03620 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CAFEL_02250 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CAFEL_02430 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cafe00785] D CAFEL_07630 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CAFEL_07635 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_07795 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CAFEL_07605 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CAFEL_04345 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CAFEL_07615 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CAFEL_07620 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAFEL_07625 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cafe00790] D CAFEL_09425 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CAFEL_00600 pld1; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CAFEL_04980 pld2; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CAFEL_09415 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CAFEL_09410 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CAFEL_04270 folP1; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CAFEL_09420 folP2; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CAFEL_03185 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CAFEL_08500 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CAFEL_06005 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CAFEL_07175 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D CAFEL_09120 dat; D-alanine aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CAFEL_03375 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:cafe00670] D CAFEL_03185 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CAFEL_05680 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CAFEL_02190 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CAFEL_03825 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CAFEL_03270 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CAFEL_03275 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CAFEL_06030 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CAFEL_07620 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CAFEL_03190 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CAFEL_06740 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CAFEL_00135 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cafe00860] D CAFEL_00595 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04915 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_01145 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CAFEL_01210 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CAFEL_01160 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CAFEL_01150 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CAFEL_01180 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CAFEL_01185 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CAFEL_05790 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CAFEL_06395 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D CAFEL_01155 nasF; Uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CAFEL_06905 sumT; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CAFEL_05925 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CAFEL_05915 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CAFEL_09880 cbiX; Sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CAFEL_07585 cobU; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CAFEL_07750 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CAFEL_10315 copA1; Copper resistance protein A precursor K22552 mmcO; multicopper oxidase [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cafe00130] D CAFEL_01450 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CAFEL_04905 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] D CAFEL_01405 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CAFEL_01390 catB; Muconate cycloisomerase 1 K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CAFEL_01335 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CAFEL_01380 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CAFEL_01285 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cafe00900] D CAFEL_06410 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CAFEL_06960 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CAFEL_09310 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CAFEL_03460 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CAFEL_09300 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CAFEL_06950 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CAFEL_03895 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_07475 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CAFEL_03815 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CAFEL_08155 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CAFEL_05930 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cafe00523] D CAFEL_00945 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAFEL_00955 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CAFEL_00950 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D CAFEL_04905 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D CAFEL_00955 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:cafe00332] D CAFEL_08450 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CAFEL_08435 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cafe00261] D CAFEL_09885 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CAFEL_09890 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CAFEL_00670 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CAFEL_00675 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CAFEL_06735 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CAFEL_06745 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cafe00521] D CAFEL_07515 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CAFEL_08955 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CAFEL_07210 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CAFEL_00945 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAFEL_00955 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CAFEL_00950 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CAFEL_07515 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cafe00525] D CAFEL_00945 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CAFEL_00955 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cafe00401] D CAFEL_00550 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CAFEL_03680 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CAFEL_11015 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CAFEL_11020 phnB; Anthranilate synthase component 2, pyocyanine specific K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CAFEL_07805 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CAFEL_06060 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cafe00362] D CAFEL_08525 catD; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CAFEL_05105 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D CAFEL_10365 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CAFEL_05435 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D CAFEL_07105 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cafe00625] D CAFEL_03570 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09765 adh2; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cafe00626] D CAFEL_03570 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CAFEL_09765 adh2; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cafe03020] D CAFEL_01565 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CAFEL_01570 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CAFEL_01880 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CAFEL_06070 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CAFEL_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cafe03010] D CAFEL_05145 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CAFEL_07000 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CAFEL_01710 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CAFEL_01875 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CAFEL_01825 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CAFEL_10640 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CAFEL_01610 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CAFEL_01810 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CAFEL_01940 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CAFEL_01675 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CAFEL_01870 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CAFEL_01605 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CAFEL_01865 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CAFEL_03305 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CAFEL_06795 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CAFEL_07070 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CAFEL_01725 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CAFEL_03300 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D CAFEL_01700 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CAFEL_08370 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CAFEL_01505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CAFEL_01695 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CAFEL_01680 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CAFEL_01685 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CAFEL_01770 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CAFEL_01815 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CAFEL_01555 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CAFEL_10630 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CAFEL_01550 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CAFEL_01500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CAFEL_01935 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CAFEL_01760 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CAFEL_01835 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CAFEL_01715 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CAFEL_01885 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CAFEL_01820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CAFEL_07045 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CAFEL_05205 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CAFEL_08465 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CAFEL_01705 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CAFEL_01690 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CAFEL_01765 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CAFEL_03670 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CAFEL_08460 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CAFEL_03315 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CAFEL_01720 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CAFEL_01830 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CAFEL_03320 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CAFEL_03325 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CAFEL_03310 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D CAFEL_11155 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CAFEL_05200 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CAFEL_08890 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36 D CAFEL_03030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cafe00970] D CAFEL_00595 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04915 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04760 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CAFEL_04820 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CAFEL_04755 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CAFEL_06185 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CAFEL_06200 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CAFEL_08140 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CAFEL_06315 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CAFEL_10265 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CAFEL_09280 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CAFEL_03430 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CAFEL_06030 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CAFEL_08505 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CAFEL_10785 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAFEL_07365 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CAFEL_09380 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CAFEL_04535 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAFEL_06865 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CAFEL_06220 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CAFEL_05235 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CAFEL_05240 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CAFEL_05305 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAFEL_02275 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cafe03060] D CAFEL_01840 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAFEL_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAFEL_05955 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAFEL_06265 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CAFEL_06260 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CAFEL_11140 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAFEL_02560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_05465 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_07080 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAFEL_07085 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CAFEL_08115 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAFEL_05610 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA D CAFEL_04325 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D CAFEL_05605 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D CAFEL_07040 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CAFEL_07335 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cafe04122] D CAFEL_04685 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAFEL_02370 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAFEL_09755 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CAFEL_04720 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CAFEL_02825 moeZ; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CAFEL_02835 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome D CAFEL_05660 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:cafe03018] D CAFEL_08470 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D CAFEL_08045 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAFEL_06790 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CAFEL_04440 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CAFEL_10600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CAFEL_04565 hypothetical protein K03628 rho; transcription termination factor Rho D CAFEL_06730 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D CAFEL_09845 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CAFEL_02020 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_03515 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CAFEL_09555 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CAFEL_11085 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cafe03030] D CAFEL_00650 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04895 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_07250 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_07305 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAFEL_00620 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAFEL_00885 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAFEL_08385 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAFEL_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAFEL_10590 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CAFEL_08075 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CAFEL_02780 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein D CAFEL_08665 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_10635 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_07750 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CAFEL_07035 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CAFEL_05135 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAFEL_04740 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cafe03410] D CAFEL_00785 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CAFEL_05045 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CAFEL_09340 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CAFEL_03520 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CAFEL_07120 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CAFEL_10695 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CAFEL_03215 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CAFEL_03400 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CAFEL_04785 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CAFEL_02245 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAFEL_09640 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAFEL_05135 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAFEL_04740 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cafe03420] D CAFEL_03735 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CAFEL_05190 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CAFEL_07185 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CAFEL_05160 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CAFEL_05990 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CAFEL_02655 pcrA1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_02670 uvrD1; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_03250 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_05135 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAFEL_04740 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CAFEL_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:cafe03430] D CAFEL_02655 pcrA1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_02670 uvrD1; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_03250 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_03890 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CAFEL_03885 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CAFEL_02780 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein D CAFEL_08665 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_10635 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_07305 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAFEL_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAFEL_00620 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAFEL_08385 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAFEL_00885 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAFEL_00650 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04895 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_07250 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04740 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cafe03440] D CAFEL_02780 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein D CAFEL_08665 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_10635 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CAFEL_08160 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CAFEL_00630 recR; Recombination protein RecR K06187 recR; recombination protein RecR D CAFEL_06650 recombinase A K03553 recA; recombination protein RecA D CAFEL_05135 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAFEL_06275 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CAFEL_06270 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CAFEL_06280 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CAFEL_00085 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAFEL_05055 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAFEL_10995 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAFEL_07305 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAFEL_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAFEL_00620 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAFEL_08385 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAFEL_00885 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAFEL_00650 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04895 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_07250 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_06040 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:cafe03450] D CAFEL_04085 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku D CAFEL_04090 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:cafe03250] D CAFEL_00150 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cafe02010] D CAFEL_02205 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein D CAFEL_04935 fbpA2; Fe(3+)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CAFEL_02210 phnV1; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein D CAFEL_04940 phnV2; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein D CAFEL_04945 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CAFEL_02200 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CAFEL_10395 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CAFEL_10405 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CAFEL_10400 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CAFEL_10390 sugC; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CAFEL_09100 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D CAFEL_09965 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein D CAFEL_09095 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D CAFEL_09090 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CAFEL_09085 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CAFEL_02160 metQ1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CAFEL_02165 metQ2; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CAFEL_09365 metQ3; Methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CAFEL_02150 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein D CAFEL_02155 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein D CAFEL_04180 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein D CAFEL_04175 dppB; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein D CAFEL_04170 dppC; Dipeptide transport system permease protein DppC K13891 gsiD; glutathione transport system permease protein D CAFEL_04165 oppD; Oligopeptide transport ATP-binding protein OppD K13892 gsiA; glutathione transport system ATP-binding protein D CAFEL_10205 yfmC; Fe(3+)-citrate-binding protein YfmC precursor K25286 fagD; iron-siderophore transport system substrate-binding protein D CAFEL_10220 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein D CAFEL_10215 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D CAFEL_10210 yusV2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CAFEL_01440 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein D CAFEL_01430 mntB1; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein D CAFEL_01435 yusV1; putative siderophore transport system ATP-binding protein YusV K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D CAFEL_06660 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D CAFEL_06670 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein D CAFEL_06665 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CAFEL_04155 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CAFEL_04395 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D CAFEL_00480 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein D CAFEL_00475 tagH1; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CAFEL_07980 ABC-2 type transporter K09692 tagG; teichoic acid transport system permease protein D CAFEL_07975 tagH2; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CAFEL_10730 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein D CAFEL_10725 ytrE3; ABC transporter ATP-binding protein YtrE K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CAFEL_01365 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D CAFEL_01360 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein D CAFEL_02950 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CAFEL_02945 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CAFEL_09945 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CAFEL_09950 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:cafe02060] D CAFEL_09370 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CAFEL_06570 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CAFEL_09375 bglF; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cafe03070] D CAFEL_06265 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CAFEL_06260 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CAFEL_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAFEL_05955 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAFEL_01840 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAFEL_11140 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAFEL_02560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_05465 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_07085 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CAFEL_07080 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAFEL_05610 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA D CAFEL_04325 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D CAFEL_05605 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cafe02020] D CAFEL_00600 pld1; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CAFEL_04980 pld2; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CAFEL_01095 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CAFEL_01100 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CAFEL_09100 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D CAFEL_09965 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein D CAFEL_05915 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CAFEL_03335 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CAFEL_03330 mprA1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D CAFEL_03340 degQ; Periplasmic pH-dependent serine endoprotease DegQ precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CAFEL_02540 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CAFEL_02535 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CAFEL_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CAFEL_01440 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein D CAFEL_01435 yusV1; putative siderophore transport system ATP-binding protein YusV K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D CAFEL_01430 mntB1; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein D CAFEL_04015 prrB; Sensor-type histidine kinase PrrB K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CAFEL_01360 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein D CAFEL_01365 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D CAFEL_07055 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CAFEL_00825 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CAFEL_00830 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D CAFEL_07655 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07720 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_00780 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAFEL_07770 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CAFEL_08010 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CAFEL_07990 wbpA2; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cafe02024] D CAFEL_03775 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CAFEL_11015 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CAFEL_11020 phnB; Anthranilate synthase component 2, pyocyanine specific K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CAFEL_07495 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CAFEL_01055 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_01060 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_08225 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_00780 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAFEL_06015 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CAFEL_02920 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CAFEL_07835 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CAFEL_02090 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAFEL_06255 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAFEL_08295 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAFEL_02095 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D CAFEL_08300 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D CAFEL_02100 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CAFEL_08305 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CAFEL_02105 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CAFEL_08310 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CAFEL_11140 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAFEL_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAFEL_05955 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAFEL_01840 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAFEL_02560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_05465 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_07085 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CAFEL_07080 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAFEL_01360 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein D CAFEL_01365 hypothetical protein K20491 nisE; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D CAFEL_06445 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CAFEL_08045 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cafe01501] D CAFEL_10040 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CAFEL_07440 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cafe01502] D CAFEL_04015 prrB; Sensor-type histidine kinase PrrB K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CAFEL_05030 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAFEL_01980 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CAFEL_07430 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CAFEL_07425 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CAFEL_07410 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cafe01503] D CAFEL_11120 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CAFEL_00150 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cafe01000] C 01001 Protein kinases [BR:cafe01001] D CAFEL_09680 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D CAFEL_00170 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CAFEL_00175 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CAFEL_05440 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CAFEL_07490 pknL; Serine/threonine-protein kinase PknL K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D CAFEL_01095 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CAFEL_03335 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CAFEL_02540 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CAFEL_04015 prrB; Sensor-type histidine kinase PrrB K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CAFEL_09230 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cafe01009] D CAFEL_00190 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cafe01002] D CAFEL_07335 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CAFEL_02065 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CAFEL_05815 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CAFEL_07525 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CAFEL_09140 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CAFEL_01730 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CAFEL_06370 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CAFEL_07565 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CAFEL_09865 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124] D CAFEL_03740 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D CAFEL_03870 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D CAFEL_08360 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D CAFEL_10305 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D CAFEL_03990 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D CAFEL_08630 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CAFEL_08250 dcp; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CAFEL_00400 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CAFEL_07595 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CAFEL_04260 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CAFEL_09575 dapE3; putative succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CAFEL_01850 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CAFEL_06940 map; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CAFEL_09430 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CAFEL_04775 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CAFEL_04805 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CAFEL_03340 degQ; Periplasmic pH-dependent serine endoprotease DegQ precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CAFEL_01905 Subtilisin BL K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CAFEL_00970 Prolyl endopeptidase precursor K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CAFEL_09200 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CAFEL_02295 dacB1; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAFEL_09455 dacB2; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CAFEL_08535 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CAFEL_08540 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CAFEL_02690 lon; Lon protease K07177 K07177; Lon-like protease D CAFEL_06560 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CAFEL_07040 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 01003 Glycosyltransferases [BR:cafe01003] D CAFEL_05570 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CAFEL_03415 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D CAFEL_06295 pimA; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CAFEL_07520 pimB1; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D CAFEL_01420 mgtA1; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D CAFEL_04300 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CAFEL_04585 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CAFEL_07480 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CAFEL_05900 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CAFEL_00410 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D CAFEL_00415 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D CAFEL_10175 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D CAFEL_06385 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D CAFEL_10050 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D CAFEL_01895 hypothetical protein K22902 K22902; D-galactosaminyltransferase D CAFEL_00465 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D CAFEL_10190 glfT2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D CAFEL_02480 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D CAFEL_09255 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CAFEL_04275 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cafe01005] D CAFEL_04585 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cafe01011] D CAFEL_09010 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CAFEL_01050 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CAFEL_07405 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CAFEL_07420 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CAFEL_07435 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CAFEL_05030 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CAFEL_01980 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CAFEL_08825 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3] D CAFEL_07425 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CAFEL_07410 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CAFEL_05710 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CAFEL_11100 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D CAFEL_07440 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CAFEL_00180 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D CAFEL_02295 dacB1; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CAFEL_09455 dacB2; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CAFEL_07525 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CAFEL_06175 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CAFEL_11120 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cafe01004] D CAFEL_10145 ppsA; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13 D CAFEL_01055 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_01060 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_08225 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_10150 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32 D CAFEL_07510 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cafe01006] D CAFEL_07475 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CAFEL_03815 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CAFEL_08155 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CAFEL_06605 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CAFEL_01285 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CAFEL_05925 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CAFEL_10180 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:cafe01007] D CAFEL_00595 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04915 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_05305 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAFEL_02275 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CAFEL_09280 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CAFEL_04535 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAFEL_03430 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CAFEL_07365 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CAFEL_08505 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CAFEL_10785 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAFEL_09380 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CAFEL_06200 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CAFEL_06220 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CAFEL_08140 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CAFEL_10265 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CAFEL_06865 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CAFEL_06315 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CAFEL_06185 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CAFEL_05235 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CAFEL_05240 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CAFEL_09980 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CAFEL_03680 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CAFEL_06635 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CAFEL_08275 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CAFEL_05260 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CAFEL_03615 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CAFEL_01210 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CAFEL_07590 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cafe00194] D CAFEL_04630 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CAFEL_04625 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CAFEL_04620 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CAFEL_04615 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CAFEL_04610 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CAFEL_04605 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CAFEL_04600 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CAFEL_04595 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cafe03000] D CAFEL_06545 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CAFEL_06565 glcR; HTH-type transcriptional repressor GlcR K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CAFEL_10270 dasR; HTH-type transcriptional repressor DasR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D CAFEL_08290 yvoA; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator D CAFEL_05650 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CAFEL_07240 tetR1; Tetracycline repressor protein class H K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CAFEL_05810 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D CAFEL_09015 transcriptional regulator MalT K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D CAFEL_09830 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D CAFEL_08150 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CAFEL_02995 pcaR; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CAFEL_00780 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CAFEL_01305 kmtR; HTH-type transcriptional regulator KmtR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CAFEL_02285 cmtR1; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CAFEL_03955 cmtR2; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CAFEL_04500 cmtR3; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CAFEL_08145 smtB; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D CAFEL_06685 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator D CAFEL_06485 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D CAFEL_01425 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CAFEL_02430 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CAFEL_06530 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CAFEL_00760 whiB1; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CAFEL_02025 whiB2; Redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CAFEL_02490 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CAFEL_02615 whiB3; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CAFEL_04705 csoR; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CAFEL_11125 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CAFEL_09315 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CAFEL_05270 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CAFEL_08210 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CAFEL_06110 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CAFEL_11080 hypothetical protein K07735 algH; putative transcriptional regulator D CAFEL_06555 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D CAFEL_07455 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cafe03021] D CAFEL_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CAFEL_01880 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CAFEL_01565 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CAFEL_01570 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CAFEL_06070 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CAFEL_06445 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor D CAFEL_06480 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CAFEL_00690 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CAFEL_02030 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CAFEL_02600 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CAFEL_04315 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CAFEL_11105 sigM; ECF RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CAFEL_06850 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D CAFEL_06135 hypothetical protein K03625 nusB; transcription antitermination protein NusB D CAFEL_01495 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D CAFEL_03795 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CAFEL_04565 hypothetical protein K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cafe03019] D CAFEL_08470 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D CAFEL_07125 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CAFEL_06730 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D CAFEL_08080 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CAFEL_08710 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CAFEL_04440 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CAFEL_10600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CAFEL_08045 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAFEL_06790 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CAFEL_04565 hypothetical protein K03628 rho; transcription termination factor Rho D CAFEL_09845 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CAFEL_02020 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_03515 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CAFEL_09555 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CAFEL_11085 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CAFEL_05985 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D CAFEL_05600 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D CAFEL_06550 hrpB2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CAFEL_00350 hrpB1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cafe03011] D CAFEL_05145 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CAFEL_07000 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CAFEL_01710 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CAFEL_01875 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CAFEL_01825 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CAFEL_10640 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CAFEL_01610 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CAFEL_01810 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CAFEL_01940 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CAFEL_01675 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CAFEL_01870 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CAFEL_01605 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CAFEL_01865 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CAFEL_03305 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CAFEL_06795 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CAFEL_07070 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CAFEL_01725 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CAFEL_03300 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D CAFEL_01700 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CAFEL_08370 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CAFEL_01505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CAFEL_01695 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CAFEL_01680 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CAFEL_01685 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CAFEL_01770 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CAFEL_01815 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CAFEL_10630 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CAFEL_01550 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CAFEL_01500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CAFEL_01555 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CAFEL_01935 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CAFEL_01760 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CAFEL_01835 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CAFEL_01715 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CAFEL_01885 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CAFEL_01820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CAFEL_07045 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CAFEL_05205 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CAFEL_08465 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CAFEL_01705 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CAFEL_01690 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CAFEL_01765 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CAFEL_08460 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CAFEL_03315 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CAFEL_01720 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CAFEL_01830 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CAFEL_03320 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CAFEL_03325 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CAFEL_03310 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D CAFEL_11155 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CAFEL_05200 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CAFEL_08890 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36 D CAFEL_03670 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CAFEL_03030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cafe03009] D CAFEL_07125 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CAFEL_08710 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CAFEL_08165 era; GTPase Era K03595 era; GTPase D CAFEL_08455 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D CAFEL_06850 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D CAFEL_06135 hypothetical protein K03625 nusB; transcription antitermination protein NusB D CAFEL_01495 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D CAFEL_03455 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CAFEL_06025 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CAFEL_06900 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D CAFEL_05060 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CAFEL_08200 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CAFEL_11135 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CAFEL_07450 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CAFEL_03420 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CAFEL_05340 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CAFEL_04290 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CAFEL_09275 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CAFEL_06970 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CAFEL_10505 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CAFEL_05395 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CAFEL_07330 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CAFEL_03935 carB1; rRNA methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D CAFEL_02000 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CAFEL_07065 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CAFEL_08470 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D CAFEL_06180 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CAFEL_04440 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CAFEL_02580 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CAFEL_05405 der; GTPase Der K03977 engA; GTPase D CAFEL_06585 hflX; GTPase HflX K03665 hflX; GTPase D CAFEL_04580 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CAFEL_06245 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CAFEL_06835 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CAFEL_06855 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CAFEL_00385 ribosome-associated protein K14761 rlbA; ribosome-associated protein D CAFEL_08415 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D CAFEL_08190 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D CAFEL_03915 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D CAFEL_07130 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cafe03016] D CAFEL_08080 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CAFEL_00595 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04915 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_06865 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CAFEL_07365 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CAFEL_10785 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAFEL_03430 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CAFEL_04535 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAFEL_09380 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CAFEL_06200 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CAFEL_06185 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CAFEL_08140 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CAFEL_06315 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CAFEL_10265 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CAFEL_09280 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CAFEL_08505 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CAFEL_06220 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CAFEL_05235 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CAFEL_05240 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CAFEL_05305 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAFEL_02275 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CAFEL_06475 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CAFEL_05665 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CAFEL_10100 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CAFEL_01890 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CAFEL_06810 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CAFEL_04685 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAFEL_04580 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CAFEL_06605 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CAFEL_03195 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CAFEL_11150 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CAFEL_08815 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CAFEL_06405 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CAFEL_00355 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CAFEL_02595 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CAFEL_00560 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CAFEL_06630 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CAFEL_07060 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CAFEL_02185 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CAFEL_05230 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CAFEL_10505 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CAFEL_04720 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CAFEL_09125 putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ D CAFEL_00580 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CAFEL_09450 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CAFEL_01995 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CAFEL_02005 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CAFEL_01985 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CAFEL_06790 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CAFEL_10615 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:cafe03012] D CAFEL_06840 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CAFEL_05195 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CAFEL_06995 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D CAFEL_01620 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D CAFEL_01615 fusA; Elongation factor G K02355 fusA; elongation factor G D CAFEL_04570 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CAFEL_06980 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor D CAFEL_04575 prmC1; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CAFEL_03645 pth1; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CAFEL_03665 pth2; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CAFEL_01860 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CAFEL_06140 efp; Elongation factor P K02356 efp; elongation factor P D CAFEL_02895 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CAFEL_03630 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D CAFEL_03980 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:cafe03110] D CAFEL_09785 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CAFEL_09355 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CAFEL_08520 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CAFEL_09845 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CAFEL_02020 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_08205 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CAFEL_09835 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CAFEL_09840 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D CAFEL_07270 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D CAFEL_02015 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D CAFEL_09430 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CAFEL_04595 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CAFEL_06325 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CAFEL_01905 Subtilisin BL K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CAFEL_00150 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CAFEL_06230 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CAFEL_10560 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin D CAFEL_11115 Thioredoxin C-1 K03671 TXN; thioredoxin D CAFEL_04655 Thioredoxin K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:cafe04131] D CAFEL_08480 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CAFEL_08115 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAFEL_03540 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAFEL_05970 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAFEL_01090 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CAFEL_07190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system [BR:cafe04121] D CAFEL_05630 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:cafe03051] D CAFEL_05660 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase D CAFEL_05625 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D CAFEL_05620 hypothetical protein K13572 pafB; proteasome accessory factor B D CAFEL_05615 hypothetical protein K13573 pafC; proteasome accessory factor C D CAFEL_05635 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:cafe03032] D CAFEL_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CAFEL_10590 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CAFEL_08075 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CAFEL_02780 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein D CAFEL_08665 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_10635 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_07305 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAFEL_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAFEL_08385 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAFEL_00885 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAFEL_00650 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04895 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_07250 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_00620 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAFEL_07750 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CAFEL_07035 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CAFEL_05135 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAFEL_04740 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CAFEL_00060 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CAFEL_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CAFEL_00870 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cafe03036] D CAFEL_07125 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CAFEL_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CAFEL_07095 smc2; Chromosome partition protein Smc K03529 smc; chromosome segregation protein D CAFEL_05385 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D CAFEL_05390 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CAFEL_08030 Septum formation initiator K05589 ftsB; cell division protein FtsB D CAFEL_02945 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CAFEL_07440 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CAFEL_06710 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CAFEL_07400 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D CAFEL_07415 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CAFEL_02950 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CAFEL_07395 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CAFEL_11120 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CAFEL_07380 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF D CAFEL_05380 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CAFEL_11130 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CAFEL_11125 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CAFEL_11135 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CAFEL_07010 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CAFEL_05370 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CAFEL_04330 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning D CAFEL_05975 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cafe03400] D CAFEL_08915 ogt; Methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CAFEL_05045 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CAFEL_03520 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CAFEL_09340 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CAFEL_00785 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CAFEL_03045 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CAFEL_04410 nudG; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CAFEL_09665 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CAFEL_06425 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CAFEL_00365 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CAFEL_04785 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CAFEL_03400 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CAFEL_07120 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CAFEL_10695 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CAFEL_03215 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CAFEL_02245 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAFEL_09640 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CAFEL_04740 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CAFEL_05135 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CAFEL_05190 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CAFEL_07185 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CAFEL_05160 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CAFEL_05990 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CAFEL_02655 pcrA1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_02670 uvrD1; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_03250 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CAFEL_01565 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CAFEL_01570 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CAFEL_01880 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CAFEL_06070 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CAFEL_03735 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CAFEL_03890 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CAFEL_03885 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CAFEL_07305 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CAFEL_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CAFEL_08385 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CAFEL_00885 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CAFEL_00650 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_04895 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_07250 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CAFEL_00620 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CAFEL_02780 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein D CAFEL_08665 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_10635 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_06650 recombinase A K03553 recA; recombination protein RecA D CAFEL_06275 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CAFEL_06270 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CAFEL_06280 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CAFEL_06040 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CAFEL_09325 hypothetical protein K04485 radA; DNA repair protein RadA/Sms D CAFEL_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CAFEL_00085 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAFEL_05055 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAFEL_10995 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CAFEL_08160 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CAFEL_00630 recR; Recombination protein RecR K06187 recR; recombination protein RecR D CAFEL_05350 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CAFEL_04085 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku D CAFEL_04090 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D CAFEL_00060 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CAFEL_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CAFEL_00870 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CAFEL_10600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CAFEL_07355 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CAFEL_06560 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CAFEL_02130 DNA polymerase IV K14161 imuB; protein ImuB D CAFEL_02170 dnaE1; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CAFEL_06645 recX; Regulatory protein RecX K03565 recX; regulatory protein D CAFEL_08850 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CAFEL_03200 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CAFEL_05020 mutT1; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CAFEL_05365 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CAFEL_08875 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CAFEL_08865 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CAFEL_06830 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cafe03029] D CAFEL_06840 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CAFEL_05195 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CAFEL_06995 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D CAFEL_01620 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D CAFEL_01615 fusA; Elongation factor G K02355 fusA; elongation factor G D CAFEL_08165 era; GTPase Era K03595 era; GTPase D CAFEL_05305 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CAFEL_10785 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CAFEL_06200 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CAFEL_08140 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CAFEL_04535 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CAFEL_04760 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CAFEL_04820 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CAFEL_04755 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CAFEL_02780 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein D CAFEL_08665 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_10635 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CAFEL_09845 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CAFEL_09840 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D CAFEL_02020 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_02015 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D CAFEL_08205 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CAFEL_09835 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CAFEL_04685 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CAFEL_04330 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning D CAFEL_05925 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CAFEL_05915 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CAFEL_11140 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cafe02000] D CAFEL_09945 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CAFEL_09950 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CAFEL_04350 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CAFEL_08265 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CAFEL_05735 yheH; putative multidrug resistance ABC transporter ATP-binding/permease protein YheH K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D CAFEL_03465 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CAFEL_05740 yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K02021 ABC.MR; putative ABC transport system ATP-binding protein D CAFEL_02205 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein D CAFEL_04935 fbpA2; Fe(3+)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CAFEL_02210 phnV1; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein D CAFEL_04940 phnV2; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein D CAFEL_04945 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CAFEL_02200 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CAFEL_10395 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CAFEL_10405 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CAFEL_10400 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CAFEL_10390 sugC; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CAFEL_01270 D-ribose transporter subunit RbsB K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D CAFEL_01265 rbsC; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D CAFEL_01260 mglA; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D CAFEL_09100 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D CAFEL_09965 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein D CAFEL_09095 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D CAFEL_09090 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CAFEL_09085 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CAFEL_02160 metQ1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CAFEL_02165 metQ2; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CAFEL_09365 metQ3; Methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CAFEL_02150 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein D CAFEL_02155 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein D CAFEL_05085 glnH1; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CAFEL_09675 glnH2; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CAFEL_05080 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D CAFEL_05075 glnQ; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CAFEL_04180 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein D CAFEL_04175 dppB; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein D CAFEL_04170 dppC; Dipeptide transport system permease protein DppC K13891 gsiD; glutathione transport system permease protein D CAFEL_04165 oppD; Oligopeptide transport ATP-binding protein OppD K13892 gsiA; glutathione transport system ATP-binding protein D CAFEL_02090 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAFEL_06255 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAFEL_08295 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CAFEL_02095 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D CAFEL_08300 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D CAFEL_02100 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CAFEL_08305 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CAFEL_02105 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CAFEL_08310 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CAFEL_10205 yfmC; Fe(3+)-citrate-binding protein YfmC precursor K25286 fagD; iron-siderophore transport system substrate-binding protein D CAFEL_10220 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein D CAFEL_10215 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D CAFEL_10210 yusV2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CAFEL_03015 feuC; Iron-uptake system permease protein FeuC K25283 yclO; iron-siderophore transport system permease protein D CAFEL_03010 feuB; Iron-uptake system permease protein FeuB K25284 yclN; iron-siderophore transport system permease protein D CAFEL_03020 fhuC1; Iron(3+)-hydroxamate import ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D CAFEL_03005 yclQ; putative ABC transporter solute-binding protein YclQ precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CAFEL_04080 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CAFEL_04075 hmuU; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein D CAFEL_04070 fhuC2; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CAFEL_04670 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CAFEL_01440 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein D CAFEL_01430 mntB1; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein D CAFEL_01435 yusV1; putative siderophore transport system ATP-binding protein YusV K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D CAFEL_01535 mntB2; Manganese transport system membrane protein MntB K09819 ABC.MN.P; manganese/iron transport system permease protein D CAFEL_01530 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D CAFEL_06660 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D CAFEL_06670 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein D CAFEL_06665 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CAFEL_04390 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D CAFEL_04155 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CAFEL_04395 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D CAFEL_04150 ykoD1; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CAFEL_04145 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein D CAFEL_09175 Periplasmic solute binding protein family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CAFEL_09185 znuB; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CAFEL_09180 putative ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CAFEL_00480 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein D CAFEL_00475 tagH1; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CAFEL_07980 ABC-2 type transporter K09692 tagG; teichoic acid transport system permease protein D CAFEL_07975 tagH2; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CAFEL_01365 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D CAFEL_01360 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein D CAFEL_10730 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein D CAFEL_10725 ytrE3; ABC transporter ATP-binding protein YtrE K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CAFEL_02950 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CAFEL_02945 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CAFEL_03055 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CAFEL_05910 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CAFEL_08330 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D CAFEL_09655 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CAFEL_02265 ytrB; ABC transporter ATP-binding protein YtrB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_03060 ybhF; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_05905 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_08325 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_09660 yxlF2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_09930 drrA3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_10540 albC; Putative ABC transporter ATP-binding protein AlbC K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CAFEL_07310 macB2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein D CAFEL_08985 ytrF; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein D CAFEL_00430 ytrE1; ABC transporter ATP-binding protein YtrE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAFEL_03930 macB1; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAFEL_05750 ytrE2; ABC transporter ATP-binding protein YtrE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAFEL_07315 lolD; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAFEL_08990 bceA; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CAFEL_05880 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CAFEL_11050 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CAFEL_01395 sdcS; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CAFEL_09955 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CAFEL_06825 mdtK; Multidrug resistance protein MdtK K26937 dinF; MATE family, multidrug efflux pump D CAFEL_02900 kgtP; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D CAFEL_01280 ydhP; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein D CAFEL_00230 smvA; Methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CAFEL_05095 yfmO; Multidrug efflux protein YfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D CAFEL_10440 ynfM; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CAFEL_09370 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CAFEL_06570 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CAFEL_09375 bglF; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CAFEL_02660 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel D CAFEL_05290 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D CAFEL_09045 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D CAFEL_03355 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D CAFEL_08640 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel D CAFEL_00530 Magnesium transporter MgtE K06213 mgtE; magnesium transporter D CAFEL_05525 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter D CAFEL_08970 crcB1; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D CAFEL_05500 tlyC1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAFEL_05505 tlyC2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAFEL_08185 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAFEL_04245 gabP1; GABA permease K16237 aroP; aromatic amino acid permease D CAFEL_04250 gabP2; GABA permease K16237 aroP; aromatic amino acid permease D CAFEL_00340 arcD; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CAFEL_04865 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CAFEL_09060 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CAFEL_10110 ydfJ2; Membrane protein YdfJ K20470 mmpL3; trehalose monomycolate/heme transporter D CAFEL_02920 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CAFEL_07835 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CAFEL_05685 dcuA; Anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CAFEL_07055 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CAFEL_04530 lutP; L-lactate permease K03303 lutP; lactate permease D CAFEL_04460 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter D CAFEL_03150 actP; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter D CAFEL_09795 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family D CAFEL_10935 gltS; Sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family D CAFEL_10230 nhaK; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D CAFEL_01295 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein D CAFEL_01300 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein D CAFEL_03110 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease D CAFEL_10795 sdaC1; Serine transporter K03837 sdaC; serine transporter D CAFEL_10825 sdaC2; Serine transporter K03837 sdaC; serine transporter D CAFEL_03995 chrA; Chromate transport protein K07240 chrA; chromate transporter D CAFEL_10195 bicA; Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family D CAFEL_08115 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CAFEL_01310 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter D CAFEL_05115 dcuD1; Putative cryptic C4-dicarboxylate transporter DcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D CAFEL_10750 dcuD2; Putative cryptic C4-dicarboxylate transporter DcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D CAFEL_00720 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CAFEL_09580 mrpA2; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CAFEL_00715 mnhC1; Na(+)/H(+) antiporter subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CAFEL_09585 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CAFEL_00710 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CAFEL_09590 mrpD2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CAFEL_00705 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CAFEL_09595 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CAFEL_00700 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CAFEL_09600 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CAFEL_00695 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CAFEL_09605 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CAFEL_11100 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D CAFEL_01275 Membrane transport protein K13936 mdcF; malonate transporter and related proteins D CAFEL_00370 rhtC1; Threonine efflux protein K05835 rhtC; threonine efflux protein D CAFEL_08380 rhtC2; Threonine efflux protein K05835 rhtC; threonine efflux protein D CAFEL_10840 rhtC3; Threonine efflux protein K05835 rhtC; threonine efflux protein D CAFEL_11075 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump D CAFEL_11070 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump D CAFEL_00590 hypothetical protein K09125 yhhQ; queuosine precursor transporter D CAFEL_07660 VIT family protein K22736 VIT; vacuolar iron transporter family protein D CAFEL_07415 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CAFEL_02905 cfiA; 2-oxoglutarate carboxylase large subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D CAFEL_01225 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D CAFEL_10115 hypothetical protein K20468 K20468; putative heme transporter D CAFEL_06330 hypothetical protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:cafe02044] D CAFEL_00825 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CAFEL_00830 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D CAFEL_07375 YGGT family protein K02221 yggT; YggT family protein D CAFEL_08400 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA D CAFEL_01915 eccCa1; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC D CAFEL_01910 hypothetical protein K27087 eccD; ESX secretion system protein EccD D CAFEL_01905 Subtilisin BL K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CAFEL_01930 esxA; 6 kDa early secretory antigenic target K14956 esx; ESAT-6 family protein D CAFEL_01925 WXG domain conatining protein K14956 esx; ESAT-6 family protein D CAFEL_02560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_05465 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CAFEL_06265 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CAFEL_01490 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CAFEL_06260 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CAFEL_05955 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CAFEL_01840 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CAFEL_07080 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CAFEL_07085 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CAFEL_11140 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CAFEL_05610 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA D CAFEL_04325 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D CAFEL_05605 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:cafe02042] D CAFEL_05500 tlyC1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAFEL_05505 tlyC2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAFEL_08185 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CAFEL_03160 hemeolysin-III related K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cafe02022] D CAFEL_01095 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CAFEL_01100 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CAFEL_03335 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CAFEL_03330 mprA1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D CAFEL_02540 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CAFEL_02535 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CAFEL_04015 prrB; Sensor-type histidine kinase PrrB K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CAFEL_09230 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CAFEL_09235 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator C 02035 Bacterial motility proteins [BR:cafe02035] D CAFEL_00825 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cafe04812] D CAFEL_07395 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CAFEL_05380 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CAFEL_11130 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CAFEL_11125 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cafe04147] D CAFEL_08045 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CAFEL_03540 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAFEL_05970 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CAFEL_05965 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CAFEL_07190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CAFEL_00150 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CAFEL_02020 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CAFEL_09845 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CAFEL_03235 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CAFEL_02050 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CAFEL_02055 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CAFEL_01620 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D CAFEL_04415 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CAFEL_11050 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CAFEL_01055 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_01060 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_08225 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CAFEL_09955 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CAFEL_03000 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CAFEL_01845 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CAFEL_06250 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CAFEL_05280 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CAFEL_05275 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CAFEL_07735 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CAFEL_04660 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CAFEL_10245 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CAFEL_07655 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_07720 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CAFEL_01160 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CAFEL_03275 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CAFEL_00990 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CAFEL_08570 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CAFEL_05940 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CAFEL_05960 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CAFEL_01090 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cafe02048] D CAFEL_06890 yoeB; Toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D CAFEL_06895 relJ; Antitoxin RelJ K19159 yefM; antitoxin YefM D CAFEL_05440 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CAFEL_03050 parD1; Antitoxin ParD1 K07746 parD1_3_4; antitoxin ParD1/3/4 D CAFEL_03965 higB-1; Toxin HigB-1 K07334 higB-1; toxin HigB-1 D CAFEL_03970 ybaQ; putative HTH-type transcriptional regulator YbaQ K21498 higA-1; antitoxin HigA-1 D CAFEL_10835 hypothetical protein K21498 higA-1; antitoxin HigA-1 D CAFEL_10615 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CAFEL_10620 vapB2; Antitoxin VapB1 K18829 mvpT; antitoxin VapB D CAFEL_01190 fitB; Toxin FitB K07062 fitB; toxin FitB [EC:3.1.-.-] D CAFEL_01195 hypothetical protein K21495 fitA; antitoxin FitA D CAFEL_07395 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CAFEL_00595 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04915 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CAFEL_04685 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cafe01504] D CAFEL_03935 carB1; rRNA methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D CAFEL_01280 ydhP; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein D CAFEL_00230 smvA; Methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CAFEL_04015 prrB; Sensor-type histidine kinase PrrB K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cafe03100] D CAFEL_03030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CAFEL_00920 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D CAFEL_00440 novJ; Short-chain reductase protein NovJ K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D CAFEL_00445 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CAFEL_01455 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D CAFEL_02335 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CAFEL_05920 qorA2; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CAFEL_06925 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D CAFEL_10430 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CAFEL_06390 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CAFEL_06320 efeN; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D CAFEL_08780 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CAFEL_06535 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CAFEL_06540 Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CAFEL_04010 yfeX; putative deferrochelatase/peroxidase YfeX K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D CAFEL_10745 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CAFEL_00250 hmp; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CAFEL_03240 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D CAFEL_02805 merA; Mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CAFEL_09910 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CAFEL_03180 mrx1; Mycoredoxin 1 K18917 mrx1; mycoredoxin [EC:1.20.4.3] D CAFEL_05530 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CAFEL_05550 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CAFEL_10125 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CAFEL_01415 Putative acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CAFEL_09105 mshD2; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D CAFEL_05575 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CAFEL_10055 oatA2; O-acetyltransferase OatA K27307 tmaT; acetyltransferase [EC:2.3.1.-] D CAFEL_03100 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D CAFEL_01070 mshA; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CAFEL_07195 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CAFEL_05050 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CAFEL_07715 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CAFEL_06910 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CAFEL_10370 frc; Formyl-coenzyme A transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D CAFEL_01315 arsC1; Arsenate-mycothiol transferase ArsC1 K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D CAFEL_04360 pnbA1; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CAFEL_10155 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D CAFEL_08655 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CAFEL_08410 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D CAFEL_03445 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CAFEL_04640 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D CAFEL_04120 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D CAFEL_06035 def1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CAFEL_09625 def2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CAFEL_04205 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D CAFEL_06045 pdaC; Peptidoglycan-N-acetylmuramic acid deacetylase PdaC K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CAFEL_03805 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D CAFEL_09805 ramA; (R)-stereoselective amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CAFEL_10700 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CAFEL_02800 merB; Alkylmercury lyase K00221 E4.99.1.2; alkylmercury lyase [EC:4.99.1.2] D CAFEL_05705 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D CAFEL_10140 accD2; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] D CAFEL_04710 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CAFEL_02280 zosA1; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] D CAFEL_03950 zosA2; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] C 99981 Carbohydrate metabolism D CAFEL_04525 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE D CAFEL_04520 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF D CAFEL_04515 lutC; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D CAFEL_01780 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D CAFEL_05870 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins D CAFEL_08565 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D CAFEL_08705 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D CAFEL_08880 Putative NrdI-like protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CAFEL_07385 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CAFEL_03080 rpfA; Resuscitation-promoting factor RpfA precursor K21687 rpfA; resuscitation-promoting factor RpfA D CAFEL_03450 rpf2; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB D CAFEL_00935 Undecaprenyl-phosphate mannosyltransferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase C 99987 Cofactor metabolism D CAFEL_02470 abgT1; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein D CAFEL_07875 abgT2; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D CAFEL_05410 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase D CAFEL_09270 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D CAFEL_03405 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CAFEL_00860 cspA1; putative cold shock protein A K03704 cspA; cold shock protein D CAFEL_03090 cspA2; Major cold shock protein CspA K03704 cspA; cold shock protein D CAFEL_07050 hypothetical protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CAFEL_08840 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CAFEL_08545 tig; Trigger factor K03545 tig; trigger factor D CAFEL_02955 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D CAFEL_08885 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D CAFEL_07020 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein D CAFEL_01230 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D CAFEL_03905 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CAFEL_07025 hypothetical protein K07460 yraN; putative endonuclease D CAFEL_05675 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease D CAFEL_07015 hypothetical protein K04096 smf; DNA processing protein D CAFEL_06190 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase D CAFEL_02810 Transposase IS66 family protein K18320 IS15; transposase, IS6 family D CAFEL_03360 SAF domain protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CAFEL_06680 PspA/IM30 family protein K03969 pspA; phage shock protein A D CAFEL_00625 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CAFEL_04425 proY; Proline-specific permease ProY K03293 TC.AAT; amino acid transporter, AAT family D CAFEL_04430 citN; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CAFEL_05640 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CAFEL_10820 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family D CAFEL_07110 alsT1; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CAFEL_08960 alsT2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CAFEL_10340 alsT3; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CAFEL_08280 brnQ; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CAFEL_08105 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein D CAFEL_04195 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D CAFEL_05825 hypothetical protein K07166 K07166; ACT domain-containing protein D CAFEL_08195 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CAFEL_04890 hrp1; Hypoxic response protein 1 K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D CAFEL_04690 acm1; Lysozyme M1 precursor K07273 acm; lysozyme D CAFEL_00930 hypothetical protein K09153 K09153; small membrane protein C 99994 Others D CAFEL_09080 hypothetical protein K02039 phoU; phosphate transport system protein D CAFEL_06705 alx; Inner membrane protein alx K05794 terC; tellurite resistance protein TerC D CAFEL_10705 czcO; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D CAFEL_02870 yjcF; putative N-acetyltransferase YjcF K02348 elaA; ElaA protein D CAFEL_00855 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein D CAFEL_08645 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin D CAFEL_00575 ydfJ1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D CAFEL_05890 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CAFEL_05885 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CAFEL_02290 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein D CAFEL_03605 hypothetical protein K07058 K07058; membrane protein D CAFEL_10465 hypothetical protein K07146 K07146; UPF0176 protein D CAFEL_10680 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D CAFEL_00115 ABC-2 family transporter protein K01421 yhgE; putative membrane protein D CAFEL_04985 ABC-2 family transporter protein K01421 yhgE; putative membrane protein D CAFEL_04990 smc1; Chromosome partition protein Smc K01421 yhgE; putative membrane protein D CAFEL_10765 yidH; Inner membrane protein YidH K00389 yidH; putative membrane protein D CAFEL_02180 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein D CAFEL_05455 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D CAFEL_10105 hypothetical protein K06860 K06860; putative heme uptake system protein D CAFEL_05070 Sulfite exporter TauE/SafE K06867 K06867; uncharacterized protein D CAFEL_08220 hypothetical protein K06867 K06867; uncharacterized protein D CAFEL_09030 hypothetical protein K06975 K06975; uncharacterized protein D CAFEL_09190 hypothetical protein K06986 K06986; uncharacterized protein D CAFEL_00390 Glyoxalase-like domain protein K06996 K06996; uncharacterized protein D CAFEL_09170 flagellar hook protein FlgE K07004 K07004; uncharacterized protein D CAFEL_06205 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D CAFEL_08900 hypothetical protein K07064 K07064; uncharacterized protein D CAFEL_06115 Epimerase family protein K07071 K07071; uncharacterized protein D CAFEL_09875 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein D CAFEL_00745 phosphodiesterase YaeI K07098 K07098; uncharacterized protein D CAFEL_00330 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein D CAFEL_00335 hypothetical protein K07120 K07120; uncharacterized protein D CAFEL_00260 hypothetical protein K07133 K07133; uncharacterized protein D CAFEL_02420 hypothetical protein K07133 K07133; uncharacterized protein D CAFEL_07755 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein D CAFEL_11145 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D CAFEL_05480 hypothetical protein K08999 K08999; uncharacterized protein D CAFEL_08025 hypothetical protein K09009 K09009; uncharacterized protein D CAFEL_00750 Yqey-like protein K09117 K09117; uncharacterized protein D CAFEL_02705 hypothetical protein K09118 K09118; uncharacterized protein D CAFEL_04185 hypothetical protein K09146 K09146; uncharacterized protein D CAFEL_05830 hypothetical protein K09157 K09157; uncharacterized protein D CAFEL_02175 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein D CAFEL_06700 YciI-like protein K09780 K09780; uncharacterized protein D CAFEL_04135 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein D CAFEL_05300 hypothetical protein K09791 K09791; uncharacterized protein D CAFEL_06870 hypothetical protein K09861 K09861; uncharacterized protein D CAFEL_04140 hypothetical protein K09956 K09956; uncharacterized protein D CAFEL_03975 hypothetical protein K09957 K09957; uncharacterized protein D CAFEL_06845 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024