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  Transfer RNA Biogenesis - Calothrix sp. PCC 7507

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D Cal7507_3314 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Cal7507_3291 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors D Cal7507_0847 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Cal7507_2581 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D Cal7507_5949 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Cal7507_0046 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Cal7507_1410 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Cal7507_5836 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Cal7507_6055 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Cal7507_6018 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Cal7507_2901 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Cal7507_2253 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D Cal7507_4709 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Cal7507_4818 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Cal7507_1721 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Cal7507_3367 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Cal7507_1748 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Cal7507_0987 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Cal7507_5734 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Cal7507_2735 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Cal7507_1502 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Cal7507_4672 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Cal7507_2229 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D Cal7507_1746 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D Cal7507_5073 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D Cal7507_0288 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] C Psudouridine synthases D Cal7507_3495 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Cal7507_1406 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D Cal7507_0572 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_0079 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_4946 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_3103 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D Cal7507_0908 SUA5/yciO/yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Cal7507_2750 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Cal7507_3233 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Cal7507_5845 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Cal7507_3479 tRNA(His)-5'-guanylyltransferase K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D Cal7507_3177 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D Cal7507_3346 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Cal7507_R0010 RNA component of RNaseP K01978 rnpB; M1 RNA B 3'processing and CCA adding factors C 3'processing factors D Cal7507_3314 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Cal7507_0218 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Cal7507_3420 Exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Cal7507_5214 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D Cal7507_5443 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D Cal7507_3291 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors D Cal7507_0847 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Cal7507_2581 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors D Cal7507_4374 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D Cal7507_5836 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Cal7507_0046 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D Cal7507_4672 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Cal7507_2229 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Cal7507_1721 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Cal7507_1410 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Cal7507_2901 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Cal7507_4709 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Cal7507_0987 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Cal7507_6055 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Cal7507_3367 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Cal7507_2253 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cal7507_4908 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Cal7507_3865 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Cal7507_1748 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Cal7507_5949 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Cal7507_6018 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Cal7507_2735 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Cal7507_1502 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Cal7507_5734 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Cal7507_4818 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] C Trans-editing factors D Cal7507_1746 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] B tRNA modification factors C Deaminases D Cal7507_2964 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Cal7507_2353 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D Cal7507_1085 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] C Methylthiotransferases D Cal7507_5669 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D Cal7507_5288 Methyltransferase type 11 K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Cal7507_2271 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Cal7507_4188 Methylenetetrahydrofolate--tRNA-(uracil-5-)-meth yltransferasetrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Cal7507_0288 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Cal7507_0826 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Cal7507_3233 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Cal7507_2989 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Cal7507_4050 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family C Psudouridine synthases D Cal7507_3495 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Cal7507_1406 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Cal7507_3306 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] C Thiolation factors D Cal7507_3158 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Cal7507_0122 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D Cal7507_4287 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D Cal7507_0572 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_0079 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_4946 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_3103 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cal7507_5662 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D Cal7507_5845 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Cal7507_2750 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Cal7507_0619 tRNA-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Cal7507_0596 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Cal7507_5369 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Cal7507_0872 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Cal7507_3749 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Cal7507_3563 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Cal7507_5427 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Cal7507_2838 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Cal7507_0481 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Cal7507_2175 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Cal7507_0852 universal protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Cal7507_0908 SUA5/yciO/yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Cal7507_0901 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Cal7507_4237 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE B tRNA degradation factors C Cal7507_3028 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] C Cal7507_4978 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C Cal7507_4859 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_5888 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_4021 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_2557 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_5076 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_1873 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_4864 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_5046 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_3105 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_1902 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_1600 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C Cal7507_5110 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024