+D GENES KO
#
KEGG Orthology (KO) - Calothrix sp. NIES-3974
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cals00010]
D NIES3974_12790 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NIES3974_21910 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D NIES3974_46500 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NIES3974_05450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NIES3974_00870 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NIES3974_44300 fructose-1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NIES3974_05850 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NIES3974_23550 fda; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NIES3974_20830 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NIES3974_14940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NIES3974_37220 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D NIES3974_38340 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NIES3974_16200 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D NIES3974_28000 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NIES3974_15110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_07350 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_41910 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_43370 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_09000 PEP-utilizing enzyme K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_23520 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NIES3974_27140 transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NIES3974_10040 dehydrogenase catalytic domain-containing protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_41690 ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_12630 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
C 00020 Citrate cycle (TCA cycle) [PATH:cals00020]
D NIES3974_15390 methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NIES3974_13290 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NIES3974_13990 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_21640 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NIES3974_21630 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NIES3974_01330 succinate dehydrogenase flavoprotein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NIES3974_11930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NIES3974_26310 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NIES3974_23520 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NIES3974_27140 transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NIES3974_10040 dehydrogenase catalytic domain-containing protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NIES3974_41690 ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cals00030]
D NIES3974_46500 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NIES3974_00880 zwf; glucose 6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NIES3974_16950 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D NIES3974_21730 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NIES3974_27110 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NIES3974_26280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NIES3974_33980 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NIES3974_34460 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NIES3974_41950 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D NIES3974_07360 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D NIES3974_35390 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D NIES3974_27130 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_01430 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NIES3974_39960 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NIES3974_05500 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D NIES3974_37060 carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D NIES3974_05850 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NIES3974_23550 fda; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NIES3974_00870 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NIES3974_44300 fructose-1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NIES3974_05450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cals00040]
D NIES3974_17650 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_13610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_02440 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NIES3974_27110 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NIES3974_27860 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D NIES3974_01640 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D NIES3974_38730 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D NIES3974_35710 carbohydrate kinase FGGY K22935 XK1; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:cals00051]
D NIES3974_21230 ribokinase-like domain-containing protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NIES3974_34070 mannose-6-phosphate isomerase type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NIES3974_39870 nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D NIES3974_41080 nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NIES3974_28610 nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NIES3974_36840 NAD-dependent epimerase/dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NIES3974_03530 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NIES3974_03520 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D NIES3974_05450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NIES3974_00870 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NIES3974_44300 fructose-1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NIES3974_27860 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D NIES3974_01640 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D NIES3974_05850 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NIES3974_23550 fda; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NIES3974_20830 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:cals00052]
D NIES3974_02430 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D NIES3974_33720 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NIES3974_03360 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NIES3974_02440 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_12790 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NIES3974_21910 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D NIES3974_05450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:cals00053]
D NIES3974_17650 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_13610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cals00500]
D NIES3974_11700 sps; sucrose phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D NIES3974_41930 sucrose-phosphate phosphatase K07024 SPP; sucrose-6-phosphatase [EC:3.1.3.24]
D NIES3974_21890 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
D NIES3974_05240 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
D NIES3974_02440 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NIES3974_19500 putative cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NIES3974_43000 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D NIES3974_23870 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D NIES3974_14330 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D NIES3974_03020 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D NIES3974_14340 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NIES3974_21740 glycoside hydrolase family protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NIES3974_24790 putative glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D NIES3974_25790 glucan 1,4-alpha-maltohexaosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D NIES3974_39440 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D NIES3974_14760 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_12790 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NIES3974_21910 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D NIES3974_46500 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NIES3974_21230 ribokinase-like domain-containing protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cals00520]
D NIES3974_22200 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NIES3974_14130 N-acetyl-glucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D NIES3974_30920 glucosamine/galactosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D NIES3974_21230 ribokinase-like domain-containing protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NIES3974_48610 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NIES3974_09250 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NIES3974_23400 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NIES3974_22620 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D NIES3974_48040 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D NIES3974_15150 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NIES3974_37190 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NIES3974_40030 N-acylglucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D NIES3974_39500 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D NIES3974_17640 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D NIES3974_12790 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NIES3974_21910 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D NIES3974_12630 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_02440 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NIES3974_17650 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_13610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_19030 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D NIES3974_02430 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D NIES3974_33720 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NIES3974_03360 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NIES3974_46500 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NIES3974_34070 mannose-6-phosphate isomerase type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NIES3974_39870 nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D NIES3974_28610 nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NIES3974_41080 nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NIES3974_36840 NAD-dependent epimerase/dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NIES3974_03530 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NIES3974_03520 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D NIES3974_43000 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D NIES3974_45180 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D NIES3974_23870 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cals00620]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NIES3974_41690 ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D NIES3974_23520 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NIES3974_27140 transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NIES3974_10040 dehydrogenase catalytic domain-containing protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_16000 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_12230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NIES3974_15110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_07350 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_39190 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NIES3974_47330 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NIES3974_11880 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NIES3974_26550 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_05580 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D NIES3974_08920 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D NIES3974_27340 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NIES3974_14240 malic enzyme, NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NIES3974_11590 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NIES3974_41910 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_43370 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_09000 PEP-utilizing enzyme K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_40510 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D NIES3974_45360 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cals00630]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NIES3974_15390 methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NIES3974_13290 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NIES3974_07600 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D NIES3974_21820 FAD linked oxidase-like protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D NIES3974_09010 hypothetical protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D NIES3974_22320 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NIES3974_08910 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NIES3974_14890 ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D NIES3974_14910 ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D NIES3974_44000 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D NIES3974_34050 ferredoxin-dependent glutamate synthase GltB K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D NIES3974_29200 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NIES3974_14610 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NIES3974_40940 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NIES3974_46460 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_46450 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D NIES3974_14770 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D NIES3974_39960 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NIES3974_02630 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cals00640]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NIES3974_12230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_16000 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NIES3974_39190 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NIES3974_47330 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NIES3974_11880 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NIES3974_26550 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NIES3974_24600 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D NIES3974_21630 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NIES3974_21640 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NIES3974_13290 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:cals00650]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NIES3974_01330 succinate dehydrogenase flavoprotein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NIES3974_11930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NIES3974_26310 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NIES3974_24600 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D NIES3974_20270 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NIES3974_16000 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NIES3974_41690 ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D NIES3974_31630 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_40990 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_35600 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cals00660]
D NIES3974_31630 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_40990 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_35600 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NIES3974_21630 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NIES3974_21640 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NIES3974_28090 leuC; 3-isopropylmalate dehydratase, large chain K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NIES3974_12090 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NIES3974_26510 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cals00562]
D NIES3974_30720 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NIES3974_34410 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NIES3974_20830 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cals00190]
D NIES3974_15400 NADH dehydrogenase subunit H K05572 ndhA; NAD(P)H-quinone oxidoreductase subunit 1 [EC:7.1.1.2]
D NIES3974_14590 proton-translocating NADH-quinone oxidoreductase, chain N K05573 ndhB; NAD(P)H-quinone oxidoreductase subunit 2 [EC:7.1.1.2]
D NIES3974_11310 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2]
D NIES3974_29030 proton-translocating NADH-quinone oxidoreductase, chain M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D NIES3974_35150 NAD(P)H-quinone oxidoreductase subunit D K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D NIES3974_08840 NAD(P)H-quinone oxidoreductase subunit M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D NIES3974_11110 proton-translocating NADH-quinone oxidoreductase, chain M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D NIES3974_12970 proton-translocating NADH-quinone oxidoreductase, chain M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D NIES3974_15430 NADH dehydrogenase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D NIES3974_36700 proton-translocating NADH-quinone oxidoreductase subunit L K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D NIES3974_08850 NAD(P)H-quinone oxidoreductase subunit F K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D NIES3974_12980 NdhF3 family NAD(P)H dehydrogenase K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D NIES3974_15420 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D NIES3974_28620 NADH dehydrogenase K05579 ndhH; NAD(P)H-quinone oxidoreductase subunit H [EC:7.1.1.2]
D NIES3974_47960 ndhH; NADH dehydrogenase subunit 7 K05579 ndhH; NAD(P)H-quinone oxidoreductase subunit H [EC:7.1.1.2]
D NIES3974_15410 ndhI; NADH dehydrogenase subunit I K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2]
D NIES3974_11290 NADH dehydrogenase (ubiquinone) 30 kDa subunit K05581 ndhJ; NAD(P)H-quinone oxidoreductase subunit J [EC:7.1.1.2]
D NIES3974_11300 NADH dehydrogenase subunit B K05582 ndhK; NAD(P)H-quinone oxidoreductase subunit K [EC:7.1.1.2]
D NIES3974_00260 hypothetical protein K05583 ndhL; NAD(P)H-quinone oxidoreductase subunit L [EC:7.1.1.2]
D NIES3974_00420 NADH dehydrogenase I subunit M K05584 ndhM; NAD(P)H-quinone oxidoreductase subunit M [EC:7.1.1.2]
D NIES3974_14310 NADH dehydrogenase I subunit N K05585 ndhN; NAD(P)H-quinone oxidoreductase subunit N [EC:7.1.1.2]
D NIES3974_30150 bidirectional hydrogenase complex protein HoxE K05586 hoxE; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D NIES3974_30160 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K05587 hoxF; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D NIES3974_30190 hoxU; hydrogenase chain U K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D NIES3974_18130 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NIES3974_33340 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NIES3974_10010 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NIES3974_01330 succinate dehydrogenase flavoprotein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NIES3974_11930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NIES3974_26310 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NIES3974_08510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NIES3974_15800 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NIES3974_33370 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NIES3974_08470 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NIES3974_08640 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NIES3974_15810 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NIES3974_33380 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NIES3974_08480 coxA; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NIES3974_08630 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NIES3974_15820 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D NIES3974_33390 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D NIES3974_08490 cytochrome C oxidase subunit II, transmembrane region K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D NIES3974_08620 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D NIES3974_08500 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D NIES3974_14270 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NIES3974_14280 cydB; cytochrome D ubiquinol oxidase chain II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NIES3974_25240 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NIES3974_45580 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NIES3974_25230 ATP synthase F1 subuint gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NIES3974_25250 ATP synthase F1 subuint delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NIES3974_45590 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NIES3974_25290 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NIES3974_25260 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NIES3974_25270 H+-transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NIES3974_25280 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NIES3974_28050 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D NIES3974_38190 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis [PATH:cals00195]
D NIES3974_22660 psbAI_2; photosystem II D1 protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_30140 Photosystem II reaction centre protein PsbA/D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_05820 photosystem Q(B) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_10630 photosystem Q(B) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_10640 photosystem Q(B) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_13820 psbAI_1; photosystem II D1 protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_35920 photosystem II chlorophyll-binding protein CP47 K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D NIES3974_10540 psbB; photosystem II P680 chlorophyll A apoprotein K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D NIES3974_02680 photosystem II 44 kDa subunit reaction center protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_07160 photosystem II CP43 protein PsbC homolog K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_07180 photosystem II CP43 protein PsbC homolog K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_07190 photosystem II CP43 protein PsbC homolog K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_10560 psbC; photosystem II CP43 protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_15700 Photosystem II reaction centre protein PsbD/D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D NIES3974_02670 Photosystem II reaction centre protein PsbD/D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D NIES3974_10570 psbD-2; photosystem II D2 protein K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D NIES3974_11340 cytochrome b559 alpha subunit K02707 psbE; photosystem II cytochrome b559 subunit alpha
D NIES3974_11350 cytochrome b559 beta subunit K02708 psbF; photosystem II cytochrome b559 subunit beta
D NIES3974_43820 photosystem II phosphoprotein PsbH K02709 psbH; photosystem II PsbH protein
D NIES3974_04200 photosystem II reaction center I protein PsbI K02710 psbI; photosystem II PsbI protein
D NIES3974_11360 photosystem II PsbJ protein K02711 psbJ; photosystem II PsbJ protein
D NIES3974_33210 photosystem II reaction center protein PsbK precursor K02712 psbK; photosystem II PsbK protein
D NIES3974_33230 photosystem II reaction center protein PsbM K02714 psbM; photosystem II PsbM protein
D NIES3974_30280 photosystem II manganese-stabilizing protein PsbO K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D NIES3974_38090 photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D NIES3974_01150 photosystem II complex extrinsic protein precursor PsuB K02719 psbU; photosystem II PsbU protein
D NIES3974_45750 cytochrome c class I K02720 psbV; photosystem II cytochrome c550
D NIES3974_09100 pbsY; photosystem II protein Y K02723 psbY; photosystem II PsbY protein
D NIES3974_47030 PsbZ protein K02724 psbZ; photosystem II PsbZ protein
D NIES3974_01940 photosystem II 11 kD protein K08902 psb27; photosystem II Psb27 protein
D NIES3974_21750 psbW; photosystem II protein W K08903 psb28; photosystem II 13kDa protein
D NIES3974_10490 photosystem II protein PsbW, class I K08904 psb28-2; photosystem II Psb28-2 protein
D NIES3974_08010 psaA; photosystem I core protein A1 K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D NIES3974_08560 PsaA protein K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D NIES3974_08020 photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D NIES3974_08570 psaB; P700 apoprotein subunit Ib K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D NIES3974_10470 photosystem I subunit VII K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D NIES3974_00400 psaD; photosystem I reaction center subunit II K02692 psaD; photosystem I subunit II
D NIES3974_38510 psaE; photosystem I protein E K02693 psaE; photosystem I subunit IV
D NIES3974_10530 photosystem I reaction center protein PsaF subunit III K02694 psaF; photosystem I subunit III
D NIES3974_12480 photosystem I reaction center protein PsaF subunit III K02694 psaF; photosystem I subunit III
D NIES3974_08590 psaI; photosystem I subunit VIII K02696 psaI; photosystem I subunit VIII
D NIES3974_10520 psaJ; photosystem I reaction center subunit IX K02697 psaJ; photosystem I subunit IX
D NIES3974_12490 photosystem I reaction centre subunit IX/PsaJ K02697 psaJ; photosystem I subunit IX
D NIES3974_39230 hypothetical protein K02698 psaK; photosystem I subunit X
D NIES3974_04770 photosystem I reaction center subunit PsaK K02698 psaK; photosystem I subunit X
D NIES3974_08580 photosystem I reaction center protein subunit XI K02699 psaL; photosystem I subunit XI
D NIES3974_12500 photosystem I reaction centre subunit XI/PsaL K02699 psaL; photosystem I subunit XI
D NIES3974_17470 photosystem I M family protein K02700 psaM; photosystem I subunit XII
D NIES3974_29290 psaX; photosystem I 4.8K protein PsaX K02702 psaX; photosystem I 4.8kDa protein
D NIES3974_48360 petA; apocytochrome f K02634 petA; apocytochrome f
D NIES3974_36870 cytochrome b6 K02635 petB; cytochrome b6
D NIES3974_48370 cytochrome b6/f complex Fe-S subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D NIES3974_05160 Rieske [2Fe-2S] domain-containing protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D NIES3974_36860 cytochrome b/b6-like protein K02637 petD; cytochrome b6-f complex subunit 4
D NIES3974_27010 cytochrome b6f complex subunit PetL K02642 petL; cytochrome b6-f complex subunit 6
D NIES3974_26970 PetM of cytochrome b6f complex subunit 7 K02643 petM; cytochrome b6-f complex subunit 7
D NIES3974_45740 plastocyanin K02638 petE; plastocyanin
D NIES3974_14720 petF; ferredoxin I, essential for growth K02639 petF; ferredoxin
D NIES3974_28720 2Fe-2S ferredoxin K02639 petF; ferredoxin
D NIES3974_32280 2Fe-2S ferredoxin K02639 petF; ferredoxin
D NIES3974_13300 2Fe-2S ferredoxin K02639 petF; ferredoxin
D NIES3974_02600 oxidoreductase FAD/NAD(P)-binding subunit K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D NIES3974_18010 cytochrome c class I K08906 petJ; cytochrome c6
D NIES3974_33830 petJ; cytochrome c6 K08906 petJ; cytochrome c6
D NIES3974_45590 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NIES3974_45580 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NIES3974_25230 ATP synthase F1 subuint gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NIES3974_25240 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NIES3974_25250 ATP synthase F1 subuint delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NIES3974_25260 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NIES3974_25270 H+-transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NIES3974_25280 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NIES3974_25290 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
C 00196 Photosynthesis - antenna proteins [PATH:cals00196]
D NIES3974_25380 phycocyanin K02092 apcA; allophycocyanin alpha subunit
D NIES3974_25390 allophycocyanin beta subunit K02093 apcB; allophycocyanin beta subunit
D NIES3974_10610 apcB; allophycocyanin beta subunit K02093 apcB; allophycocyanin beta subunit
D NIES3974_25400 CpcD phycobilisome linker-like protein K02094 apcC; phycobilisome core linker protein
D NIES3974_37410 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_10580 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_10600 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_10620 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_25360 phycobilisome protein K02096 apcE; phycobilisome core-membrane linker protein
D NIES3974_10590 apcE_1; phycobilisome core-membrane linker polypeptide K02096 apcE; phycobilisome core-membrane linker protein
D NIES3974_29210 allophycocyanin beta subunit K02097 apcF; phycobilisome core component
D NIES3974_44820 C-phycocyanin-1 alpha chain K02284 cpcA; phycocyanin alpha chain
D NIES3974_44810 cpcB1; phycocyanin beta subunit K02285 cpcB; phycocyanin beta chain
D NIES3974_44830 phycobilisome linker polypeptide CpcC2 K02286 cpcC; phycocyanin-associated rod linker protein
D NIES3974_44840 phycobilisome linker polypeptide CpcC K02286 cpcC; phycocyanin-associated rod linker protein
D NIES3974_44850 CpcD phycobilisome linker domain protein K02287 cpcD; phycocyanin-associated, rod
D NIES3974_44860 HEAT repeat-containing PBS lyase K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D NIES3974_44870 HEAT domain-containing protein K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32]
D NIES3974_44540 phycobilisome linker polypeptide CpcG2 K02290 cpcG; phycobilisome rod-core linker protein
D NIES3974_04230 phycobilisome linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D NIES3974_04240 phycobilisome linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D NIES3974_12890 phycobilisome protein CpeA K05376 cpeA; phycoerythrin alpha chain
D NIES3974_12880 phycobilisome protein K05377 cpeB; phycoerythrin beta chain
D NIES3974_21810 phycobilisome linker polypeptide K05378 cpeC; phycoerythrin-associated linker protein
D NIES3974_06560 cpeC; phycoerythrin-associated linker protein CpeC K05378 cpeC; phycoerythrin-associated linker protein
D NIES3974_21800 phycobilisome linker polypeptide K05379 cpeD; phycoerythrin-associated linker protein
D NIES3974_17550 phycoerythrin-associated linker protein, CpeR K05381 cpeR; phycoerythrin-associated linker protein
D NIES3974_44550 phycoerythrin-associated linker protein, CpeR K05381 cpeR; phycoerythrin-associated linker protein
D NIES3974_17570 putative phycoerythrin-associated linker protein, CpeS K05382 cpeS; phycoerythrin-associated linker protein
D NIES3974_17560 CpeT protein K05383 cpeT; CpeT protein
D NIES3974_35260 HEAT repeat-containing PBS lyase K05384 cpeU; bilin biosynthesis protein
D NIES3974_35280 HEAT repeat-containing PBS lyase K05385 cpeY; bilin biosynthesis protein
D NIES3974_15630 HEAT repeat-containing PBS lyase K05386 cpeZ; bilin biosynthesis protein
C 00710 Carbon fixation by Calvin cycle [PATH:cals00710]
D NIES3974_14890 ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D NIES3974_14910 ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D NIES3974_38340 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NIES3974_14940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NIES3974_37220 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D NIES3974_05850 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NIES3974_23550 fda; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NIES3974_00870 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NIES3974_44300 fructose-1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NIES3974_26280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NIES3974_41950 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D NIES3974_36600 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D NIES3974_02590 prk; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D NIES3974_20830 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NIES3974_27110 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NIES3974_33980 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NIES3974_34460 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NIES3974_11590 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cals00720]
D NIES3974_41690 ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D NIES3974_41910 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_43370 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_09000 PEP-utilizing enzyme K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_11590 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NIES3974_01330 succinate dehydrogenase flavoprotein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NIES3974_11930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NIES3974_26310 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NIES3974_21640 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NIES3974_21630 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NIES3974_13990 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NIES3974_13290 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NIES3974_39190 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NIES3974_47330 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NIES3974_11880 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NIES3974_26550 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NIES3974_15550 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NIES3974_02900 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NIES3974_12230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cals00680]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_28670 aroE; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D NIES3974_14610 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NIES3974_44000 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D NIES3974_28000 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NIES3974_11590 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NIES3974_05850 fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NIES3974_23550 fda; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NIES3974_00870 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NIES3974_44300 fructose-1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NIES3974_05450 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NIES3974_12230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NIES3974_41910 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_43370 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_09000 PEP-utilizing enzyme K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NIES3974_16200 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D NIES3974_33540 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NIES3974_28710 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NIES3974_07950 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D NIES3974_40850 hypothetical protein K11781 cofH; 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase [EC:2.5.1.147]
D NIES3974_20250 cofG; FO synthase subunit 1 K11780 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase [EC:4.3.1.32]
C 00910 Nitrogen metabolism [PATH:cals00910]
D NIES3974_19250 nrtA; nitrate/nitrite transport system substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D NIES3974_07240 twin-arginine translocation pathway signal K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D NIES3974_19260 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D NIES3974_07250 nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein
D NIES3974_28440 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D NIES3974_19280 nitrate transport ATP-binding subunits C and D K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D NIES3974_30470 assimilatory nitrate reductase (ferredoxin) precursor K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D NIES3974_19240 nirA; ferredoxin--nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D NIES3974_22060 precorrin-8X methylmutase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D NIES3974_31960 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D NIES3974_32070 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D NIES3974_31950 nitrogenase reductase K02588 nifH; nitrogenase iron protein NifH
D NIES3974_39900 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NIES3974_29200 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NIES3974_34050 ferredoxin-dependent glutamate synthase GltB K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
C 00920 Sulfur metabolism [PATH:cals00920]
D NIES3974_14990 sulfate ABC transporter periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NIES3974_14960 sulfate ABC transporter permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NIES3974_14950 sulfate ABC transporter inner membrane subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D NIES3974_17320 sulfate ABC transporter ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NIES3974_00160 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D NIES3974_14840 Ap4A phosphorylase II K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D NIES3974_08310 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NIES3974_21040 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D NIES3974_02000 sulfite reductase, ferredoxin dependent K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D NIES3974_21110 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D NIES3974_23370 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NIES3974_16190 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_45320 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_12310 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_47460 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NIES3974_04060 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NIES3974_09050 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NIES3974_14970 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cals00061]
D NIES3974_39190 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NIES3974_47330 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NIES3974_11880 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NIES3974_26550 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NIES3974_26300 acyl carrier protein K02078 acpP; acyl carrier protein
D NIES3974_48420 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NIES3974_40350 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NIES3974_48430 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NIES3974_26290 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NIES3974_11710 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NIES3974_45670 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NIES3974_17040 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NIES3974_07620 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NIES3974_38070 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cals00071]
D NIES3974_38070 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cals00561]
D NIES3974_14770 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_39640 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D NIES3974_39630 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D NIES3974_48440 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NIES3974_36480 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NIES3974_24390 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NIES3974_35110 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NIES3974_03510 hypothetical protein K27539 K27539; diacylglycerol/phytol O-acyltransferase [EC:2.3.1.20 2.3.1.314]
D NIES3974_18420 hypothetical protein K27539 K27539; diacylglycerol/phytol O-acyltransferase [EC:2.3.1.20 2.3.1.314]
D NIES3974_02160 lipase, class 2 K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D NIES3974_24560 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D NIES3974_02710 glycosyl transferase family protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D NIES3974_18530 hypothetical protein K20024 mgdE; monoglucosyldiacylglycerol epimerase [EC:5.1.3.34]
D NIES3974_19030 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:cals00564]
D NIES3974_25900 NAD-dependent glycerol-3-phosphate dehydrogenase-like protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D NIES3974_36480 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NIES3974_24390 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NIES3974_35110 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NIES3974_27770 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NIES3974_18810 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cals00600]
D NIES3974_29430 hypothetical protein K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
C 00590 Arachidonic acid metabolism
D NIES3974_45530 lipoxygenase-like protein K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33]
C 00591 Linoleic acid metabolism
D NIES3974_16680 desD; delta 6 acyl-lipid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cals00230]
D NIES3974_03790 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_01430 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NIES3974_46190 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NIES3974_33480 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D NIES3974_01190 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NIES3974_03110 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D NIES3974_41160 phosphoribosylformyl glycinamidine synthetase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D NIES3974_24490 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D NIES3974_24480 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NIES3974_09200 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D NIES3974_42760 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D NIES3974_14140 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D NIES3974_17010 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D NIES3974_09340 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NIES3974_14400 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NIES3974_19300 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NIES3974_23410 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NIES3974_29540 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NIES3974_43980 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NIES3974_29220 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NIES3974_35840 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NIES3974_20840 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NIES3974_45230 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NIES3974_09180 GMP synthase large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NIES3974_12510 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NIES3974_30850 RP ribonucleotide reductase-like protein K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2]
D NIES3974_05900 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D NIES3974_36190 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NIES3974_00040 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NIES3974_16990 adenylate/guanylate cyclase with GAF and PAS/PAC sensors K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D NIES3974_20750 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D NIES3974_39090 adenylate/guanylate cyclase with GAF and PAS/PAC sensors K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D NIES3974_18760 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NIES3974_25490 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D NIES3974_16350 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NIES3974_06310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NIES3974_39850 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D NIES3974_14840 Ap4A phosphorylase II K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D NIES3974_00160 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cals00240]
D NIES3974_48070 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NIES3974_31050 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NIES3974_28130 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NIES3974_10440 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D NIES3974_12020 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D NIES3974_44980 dihydroorotate dehydrogenase 2 K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D NIES3974_29780 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D NIES3974_47260 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NIES3974_17300 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D NIES3974_25870 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NIES3974_20840 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NIES3974_38110 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D NIES3974_21930 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D NIES3974_27170 panC; pantothenate synthetase PanC K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D NIES3974_23410 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NIES3974_29540 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NIES3974_43980 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NIES3974_00810 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D NIES3974_33440 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NIES3974_19660 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NIES3974_30850 RP ribonucleotide reductase-like protein K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2]
D NIES3974_23220 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D NIES3974_35700 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NIES3974_14700 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D NIES3974_05910 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cals00250]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_01140 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D NIES3974_22350 L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D NIES3974_32990 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NIES3974_28810 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NIES3974_36460 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NIES3974_02380 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NIES3974_44000 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D NIES3974_27790 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D NIES3974_08770 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D NIES3974_44350 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NIES3974_36580 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NIES3974_18760 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NIES3974_09340 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NIES3974_28130 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NIES3974_24600 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D NIES3974_20270 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NIES3974_39900 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NIES3974_47540 putative delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NIES3974_29200 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NIES3974_48070 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NIES3974_31050 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NIES3974_27150 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D NIES3974_24480 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NIES3974_48610 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NIES3974_46190 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cals00260]
D NIES3974_26120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NIES3974_48580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NIES3974_02610 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NIES3974_11280 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D NIES3974_15460 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NIES3974_21440 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NIES3974_14610 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NIES3974_44000 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D NIES3974_16200 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D NIES3974_14770 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D NIES3974_33540 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NIES3974_28710 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NIES3974_05910 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D NIES3974_40940 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NIES3974_46460 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_46450 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D NIES3974_42540 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NIES3974_00240 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NIES3974_08300 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cals00270]
D NIES3974_16190 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_45320 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_12310 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_47460 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NIES3974_04060 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NIES3974_09050 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NIES3974_41470 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NIES3974_25170 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NIES3974_30040 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NIES3974_41700 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D NIES3974_22540 speE_1; putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NIES3974_47290 speE_2; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NIES3974_29860 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D NIES3974_29220 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NIES3974_43690 aIF-2BI family translation initiation factor K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D NIES3974_08100 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D NIES3974_38130 ribulose-bisphosphate carboxylase K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D NIES3974_08090 HAD-superfamily hydrolase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D NIES3974_08080 acireductone dioxygenase ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D NIES3974_17070 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_24060 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_09450 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_02500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NIES3974_31470 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D NIES3974_26120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NIES3974_48580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NIES3974_02610 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NIES3974_18430 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D NIES3974_36940 iron-sulfur cluster binding protein homolog K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D NIES3974_14970 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NIES3974_14980 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D NIES3974_23150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NIES3974_02120 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_23370 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NIES3974_21280 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NIES3974_33540 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NIES3974_28710 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cals00280]
D NIES3974_23150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_09120 6-phosphogluconate dehydrogenase NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cals00290]
D NIES3974_42540 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NIES3974_28090 leuC; 3-isopropylmalate dehydratase, large chain K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NIES3974_12090 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NIES3974_26510 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D NIES3974_31630 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_40990 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_35600 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NIES3974_35670 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NIES3974_48650 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NIES3974_23150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NIES3974_40510 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cals00300]
D NIES3974_02610 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NIES3974_26120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NIES3974_48580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NIES3974_48590 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NIES3974_25120 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NIES3974_40060 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NIES3974_28850 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NIES3974_37730 L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D NIES3974_46390 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D NIES3974_01480 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NIES3974_06710 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NIES3974_24180 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NIES3974_37850 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cals00310]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_20270 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NIES3974_43010 FAD dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cals00220]
D NIES3974_03800 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D NIES3974_44350 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NIES3974_36580 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NIES3974_41170 hypothetical protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27]
D NIES3974_27150 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D NIES3974_24480 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NIES3974_29200 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NIES3974_48070 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NIES3974_31050 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NIES3974_39900 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_24250 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D NIES3974_47870 acetyltransferase, GNAT family protein K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D NIES3974_19360 ArgJ protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D NIES3974_13690 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D NIES3974_31640 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D NIES3974_40060 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cals00330]
D NIES3974_00580 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D NIES3974_18740 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D NIES3974_19660 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NIES3974_38600 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D NIES3974_03540 hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D NIES3974_03550 putative hydratase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D NIES3974_22540 speE_1; putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NIES3974_47290 speE_2; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NIES3974_41700 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_21660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NIES3974_41170 hypothetical protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27]
D NIES3974_11090 aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D NIES3974_35330 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NIES3974_47540 putative delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NIES3974_27540 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NIES3974_19850 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NIES3974_24280 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cals00340]
D NIES3974_12280 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D NIES3974_37470 putative histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D NIES3974_17380 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D NIES3974_29840 hisA; phosphorybosilformimino-5-amino-phosphorybosil-4-imidazolecarboxamideisomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D NIES3974_26760 imidazole glycerol phosphate synthase glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D NIES3974_32840 imidazoleglycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D NIES3974_07610 HisB protein K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D NIES3974_03100 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_06990 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_19490 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D NIES3974_46200 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_21520 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:cals00350]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_03100 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_06990 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_39420 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NIES3974_20270 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:cals00360]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_03100 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_06990 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_39420 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NIES3974_21660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:cals00380]
D NIES3974_07330 kmo; putative kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_21660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cals00400]
D NIES3974_05790 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NIES3974_11780 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NIES3974_30410 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D NIES3974_14550 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D NIES3974_31610 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NIES3974_12130 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D NIES3974_20020 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D NIES3974_00390 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NIES3974_35100 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NIES3974_31070 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NIES3974_39220 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D NIES3974_47050 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D NIES3974_00240 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NIES3974_08300 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NIES3974_13890 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D NIES3974_37710 arogenate dehydrogenase K15226 tyrAa; arogenate dehydrogenase (NADP+) [EC:1.3.1.78]
D NIES3974_34150 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_03100 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_06990 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cals00410]
D NIES3974_28040 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D NIES3974_24600 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_27170 panC; pantothenate synthetase PanC K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
C 00430 Taurine and hypotaurine metabolism [PATH:cals00430]
D NIES3974_27790 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D NIES3974_12230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cals00450]
D NIES3974_41470 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NIES3974_37600 SufS subfamily cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D NIES3974_27630 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NIES3974_00160 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D NIES3974_48490 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cals00460]
D NIES3974_22350 L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D NIES3974_32990 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NIES3974_14610 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cals00470]
D NIES3974_15350 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NIES3974_02530 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_02960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_27150 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D NIES3974_24480 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NIES3974_12590 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NIES3974_01610 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NIES3974_23500 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D NIES3974_23490 Mandelate racemase/muconate lactonizing enzyme K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D NIES3974_28850 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NIES3974_01480 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NIES3974_06710 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cals00480]
D NIES3974_11740 5-oxoprolinase (ATP-hydrolyzing) K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D NIES3974_02120 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NIES3974_46140 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NIES3974_04430 peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NIES3974_22230 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_23430 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_38010 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_47930 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_11830 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_11480 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D NIES3974_13990 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NIES3974_21730 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NIES3974_00880 zwf; glucose 6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NIES3974_05730 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D NIES3974_22540 speE_1; putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NIES3974_47290 speE_2; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cals00515]
D NIES3974_26790 glycosyl transferase family protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cals00514]
D NIES3974_26790 glycosyl transferase family protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cals00511]
D NIES3974_14200 glycosyl hydrolase 38 protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D NIES3974_29430 hypothetical protein K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:cals00540]
D NIES3974_17050 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NIES3974_17030 UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NIES3974_15950 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NIES3974_17060 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
C 00542 O-Antigen repeat unit biosynthesis [PATH:cals00542]
D NIES3974_45780 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_25530 family 4 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cals00541]
D NIES3974_02440 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NIES3974_33720 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NIES3974_03360 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NIES3974_17650 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_13610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NIES3974_15140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_25040 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_15040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NIES3974_38830 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NIES3974_43030 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NIES3974_19080 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NIES3974_07520 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NIES3974_43000 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D NIES3974_45180 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D NIES3974_34070 mannose-6-phosphate isomerase type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NIES3974_41080 nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NIES3974_36840 NAD-dependent epimerase/dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NIES3974_03530 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NIES3974_03520 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D NIES3974_23400 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NIES3974_39500 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:cals00550]
D NIES3974_15150 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NIES3974_37190 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NIES3974_37200 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NIES3974_01610 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NIES3974_24180 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NIES3974_02530 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_02960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_37850 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NIES3974_06690 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NIES3974_13800 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NIES3974_21770 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NIES3974_02550 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NIES3974_17270 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_26210 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_45080 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NIES3974_09910 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NIES3974_05300 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NIES3974_28430 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NIES3974_02580 hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D NIES3974_40200 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cals00552]
D NIES3974_13800 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NIES3974_45780 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_25530 family 4 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_34730 WecB/TagA/CpsF family glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D NIES3974_45190 glycosyl transferase, WecB/TagA/CpsF family protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D NIES3974_47640 WecB/TagA/CpsF family glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D NIES3974_14390 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D NIES3974_27030 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D NIES3974_41070 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cals00543]
D NIES3974_41330 hexapeptide repeat-containing transferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D NIES3974_02420 transferase hexapeptide repeat containing protein K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D NIES3974_37100 putative glycosyltransferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
D NIES3974_45780 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_25530 family 4 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_16190 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_45320 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NIES3974_12310 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cals00730]
D NIES3974_18460 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D NIES3974_07100 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D NIES3974_26570 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_28230 aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_31930 nifS; nitrogenase cofactor synthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_19900 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NIES3974_21220 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D NIES3974_39520 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D NIES3974_37230 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NIES3974_20220 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NIES3974_25910 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NIES3974_03190 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NIES3974_16350 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NIES3974_06310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NIES3974_47270 transcriptional activator, TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cals00740]
D NIES3974_35610 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NIES3974_03990 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NIES3974_00500 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D NIES3974_03810 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D NIES3974_29560 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NIES3974_03790 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NIES3974_31570 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cals00750]
D NIES3974_30830 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D NIES3974_01620 pyridoxal 5'-phosphate synthase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D NIES3974_18920 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D NIES3974_28710 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NIES3974_15190 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D NIES3974_15460 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NIES3974_21440 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cals00760]
D NIES3974_01140 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D NIES3974_25840 quinolinate synthetase complex subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D NIES3974_18250 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D NIES3974_21000 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D NIES3974_23410 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NIES3974_29540 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NIES3974_43980 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NIES3974_20990 nadD; nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D NIES3974_20970 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D NIES3974_15440 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NIES3974_17600 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NIES3974_36970 nicotinamide nucleotide transhydrogenase, subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NIES3974_36980 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NIES3974_36950 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D NIES3974_20270 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cals00770]
D NIES3974_31630 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_40990 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NIES3974_35600 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NIES3974_35670 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NIES3974_48650 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NIES3974_02810 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D NIES3974_27170 panC; pantothenate synthetase PanC K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D NIES3974_26070 Baf family transcriptional activator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D NIES3974_20190 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D NIES3974_08200 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NIES3974_31820 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NIES3974_35290 acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D NIES3974_05890 4'-phosphopantetheinyl transferase HetI K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D NIES3974_23150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NIES3974_28040 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cals00780]
D NIES3974_26290 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NIES3974_11710 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NIES3974_45670 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NIES3974_17040 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NIES3974_07620 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NIES3974_36760 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NIES3974_05600 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NIES3974_43750 hypothetical protein K25570 bioU; 8-amino-7-oxononanoate carboxylating dehydrogenase [EC:2.6.1.121]
D NIES3974_05280 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D NIES3974_33700 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cals00785]
D NIES3974_31670 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NIES3974_27880 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NIES3974_29280 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NIES3974_37720 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_23520 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NIES3974_27140 transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NIES3974_10040 dehydrogenase catalytic domain-containing protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NIES3974_40940 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NIES3974_46460 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NIES3974_46450 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cals00790]
D NIES3974_21870 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NIES3974_39210 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NIES3974_03190 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NIES3974_46070 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D NIES3974_26200 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D NIES3974_37160 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D NIES3974_03380 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NIES3974_35610 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NIES3974_29170 para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D NIES3974_00660 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D NIES3974_31780 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NIES3974_47490 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D NIES3974_22400 radical SAM domain-containing protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NIES3974_23230 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NIES3974_25460 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NIES3974_07920 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NIES3974_48280 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NIES3974_22800 moaE; molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NIES3974_21760 molybdenum cofactor synthesis domain-containing protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NIES3974_43510 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NIES3974_27250 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cals00670]
D NIES3974_15550 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NIES3974_14610 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NIES3974_01190 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NIES3974_14400 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NIES3974_36230 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NIES3974_46460 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NIES3974_41470 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NIES3974_14700 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D NIES3974_02630 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D NIES3974_02900 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NIES3974_23360 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cals00860]
D NIES3974_37390 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NIES3974_44310 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D NIES3974_17400 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NIES3974_14350 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NIES3974_03030 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D NIES3974_19040 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D NIES3974_24720 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D NIES3974_05330 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D NIES3974_24000 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D NIES3974_07490 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NIES3974_31830 uroporphyrinogen III methylase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D NIES3974_29960 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D NIES3974_08510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NIES3974_08500 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D NIES3974_22080 cobI; precorrin-2 methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D NIES3974_13140 cobalamin biosynthesis precorrin-3 methylase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D NIES3974_03750 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D NIES3974_19770 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D NIES3974_33240 cobalamin biosynthesis protein D K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D NIES3974_12260 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D NIES3974_27780 precorrin-6Y C5,15-methyltransferase subunit CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D NIES3974_22070 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D NIES3974_34400 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D NIES3974_48050 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D NIES3974_26040 cobN; cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D NIES3974_16340 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NIES3974_18700 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NIES3974_43220 hypothetical protein K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NIES3974_38530 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D NIES3974_03590 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D NIES3974_41290 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D NIES3974_38560 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D NIES3974_43500 hydrogenobyrinic acid a,c-diamide cobaltochelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D NIES3974_08040 magnesium chelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D NIES3974_18540 chlD; magnesium-chelatase subunit ChlD K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D NIES3974_37270 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D NIES3974_10870 Mg-protoporphyrin IX methyl transferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D NIES3974_42220 response regulator receiver protein K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D NIES3974_23050 magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D NIES3974_47770 magnesium-protoporphyrin IX monomethyl ester aerobic oxidativecyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D NIES3974_27740 coenzyme F420 hydrogenase/dehydrogenase beta subunit K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
D NIES3974_16250 por; protochlorophyllide oxidoreductase K00218 por; protochlorophyllide reductase [EC:1.3.1.33]
D NIES3974_48200 chlL; protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D NIES3974_48180 chlN; protochlorophyllide reductase subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D NIES3974_40340 light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D NIES3974_21470 bacteriochlorophyll/chlorophyll a synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D NIES3974_17590 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D NIES3974_21390 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D NIES3974_00760 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D NIES3974_21190 homoserine dehydrogenase, NAD-binding protein K00214 BLVRA; biliverdin reductase [EC:1.3.1.24]
D NIES3974_24670 ferredoxin-dependent bilin reductase K05369 pebA; 15,16-dihydrobiliverdin:ferredoxin oxidoreductase [EC:1.3.7.2]
D NIES3974_24660 ferredoxin-dependent bilin reductase K05370 pebB; phycoerythrobilin:ferredoxin oxidoreductase [EC:1.3.7.3]
D NIES3974_03460 phycocyanobilin:ferredoxin oxidoreductase K05371 pcyA; phycocyanobilin:ferredoxin oxidoreductase [EC:1.3.7.5]
D NIES3974_13220 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D NIES3974_13240 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cals00130]
D NIES3974_11860 hypothetical protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D NIES3974_00050 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NIES3974_45240 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D NIES3974_31570 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D NIES3974_37830 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D NIES3974_24770 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D NIES3974_00510 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D NIES3974_44890 hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D NIES3974_29940 menC; O-succinylbenzoic acid synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D NIES3974_29930 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D NIES3974_02570 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D NIES3974_11160 thioesterase superfamily protein K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D NIES3974_24760 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K23094 ABC4; 2-carboxy-1,4-naphthoquinone phytyltransferase [EC:2.5.1.130]
D NIES3974_46320 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17872 NDC1; demethylphylloquinone reductase [EC:1.6.5.12]
D NIES3974_25770 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K23095 MENG; demethylphylloquinol methyltransferase [EC:2.1.1.329]
D NIES3974_02080 NADPH-dependent FMN reductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D NIES3974_39420 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NIES3974_44440 putative delta(24)-sterol C-methyltransferase K18534 K18534; MPBQ/MSBQ methyltransferase [EC:2.1.1.295]
D NIES3974_11660 UbiA prenyltransferase K09833 HPT; homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]
D NIES3974_24340 tocopherol cyclase K09834 VTE1; tocopherol cyclase [EC:5.5.1.24]
D NIES3974_45790 cyclopropane-fatty-acyl-phospholipid synthase K05928 E2.1.1.95; tocopherol O-methyltransferase [EC:2.1.1.95]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cals00900]
D NIES3974_19900 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NIES3974_07710 deoxyxylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NIES3974_36810 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D NIES3974_47000 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NIES3974_28470 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D NIES3974_34270 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NIES3974_10700 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NIES3974_31570 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D NIES3974_35730 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D NIES3974_15560 geranylgeranyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D NIES3974_12570 polyprenyl synthetase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D NIES3974_06690 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NIES3974_17590 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cals00906]
D NIES3974_43260 pys; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D NIES3974_00320 pds; phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D NIES3974_21330 hypothetical protein K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19]
D NIES3974_38950 hypothetical protein K14606 cruP; lycopene cyclase CruP [EC:5.5.1.19]
D NIES3974_43460 FAD dependent oxidoreductase K02292 crtO; beta-carotene ketolase (CrtO type)
D NIES3974_44280 fatty acid desaturase K09836 crtW; beta-carotene/zeaxanthin 4-ketolase [EC:1.14.99.63 1.14.99.64]
D NIES3974_15100 fatty acid desaturase K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-]
D NIES3974_06100 putative glucosyl transferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NIES3974_26280 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cals00523]
D NIES3974_15140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_25040 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_15040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NIES3974_38830 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NIES3974_43030 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NIES3974_19080 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NIES3974_07520 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D NIES3974_24770 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D NIES3974_15040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:cals00311]
D NIES3974_08800 isopenicillin-N epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D NIES3974_24260 peptidoglycan glycosyltransferase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_10500 peptidoglycan glycosyltransferase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_13500 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cals00332]
D NIES3974_27540 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NIES3974_19850 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NIES3974_24280 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cals00261]
D NIES3974_00160 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D NIES3974_26120 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NIES3974_48580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NIES3974_48590 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NIES3974_25120 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cals00521]
D NIES3974_12790 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NIES3974_21910 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D NIES3974_20360 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NIES3974_30720 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NIES3974_34410 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NIES3974_15140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_25040 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_15040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NIES3974_38830 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NIES3974_43030 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NIES3974_19080 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NIES3974_07520 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D NIES3974_12790 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NIES3974_21910 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cals00525]
D NIES3974_15140 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_25040 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NIES3974_15040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cals00401]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_03100 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_06990 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:cals00405]
D NIES3974_43240 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D NIES3974_00390 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NIES3974_35100 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D NIES3974_48420 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NIES3974_45670 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NIES3974_07620 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D NIES3974_26300 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D NIES3974_25170 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NIES3974_30040 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation [PATH:cals00627]
D NIES3974_21660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NIES3974_31570 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:cals00364]
D NIES3974_48520 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:cals00625]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D NIES3974_48330 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NIES3974_32070 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D NIES3974_31950 nitrogenase reductase K02588 nifH; nitrogenase iron protein NifH
D NIES3974_31960 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cals00361]
D NIES3974_48520 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:cals00623]
D NIES3974_48520 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D NIES3974_37510 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D NIES3974_37500 [NiFe] uptake hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:cals00643]
D NIES3974_21660 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cals00626]
D NIES3974_04890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NIES3974_05410 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cals03020]
D NIES3974_16770 DNA-directed RNA polymerase, beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NIES3974_16790 rpoC1; RNA polymerase gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NIES3974_16800 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NIES3974_06360 DNA-directed RNA polymerase, alpha subunit RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NIES3974_44090 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cals03010]
D NIES3974_35930 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NIES3974_48510 RNA-binding S1 domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D NIES3974_35760 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NIES3974_06180 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NIES3974_37360 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NIES3974_06280 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NIES3974_14650 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NIES3974_34100 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NIES3974_06250 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NIES3974_06400 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NIES3974_34130 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NIES3974_06350 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NIES3974_34090 ribosomal protein S12/S23 K02950 RP-S12; small subunit ribosomal protein S12
D NIES3974_06340 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NIES3974_06500 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NIES3974_11800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NIES3974_19890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NIES3974_06210 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NIES3974_01690 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NIES3974_06160 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NIES3974_16750 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NIES3974_24290 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NIES3974_31690 rps21; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NIES3974_03280 rpl1; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NIES3974_06150 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NIES3974_06120 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NIES3974_06130 rpl4; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NIES3974_06240 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NIES3974_06260 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NIES3974_03260 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NIES3974_27330 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NIES3974_03270 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NIES3974_03290 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NIES3974_06390 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NIES3974_06220 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NIES3974_06290 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NIES3974_06190 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NIES3974_06370 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NIES3974_06270 rpl18; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NIES3974_03330 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NIES3974_29380 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NIES3974_21560 rpl21; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NIES3974_06170 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NIES3974_06140 ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D NIES3974_06230 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NIES3974_18770 ribosomal protein L25-like protein K02897 RP-L25; large subunit ribosomal protein L25
D NIES3974_21570 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NIES3974_10190 rpl28; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NIES3974_06200 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NIES3974_06410 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NIES3974_17170 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NIES3974_19600 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NIES3974_29390 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cals00970]
D NIES3974_37390 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NIES3974_21980 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NIES3974_35950 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NIES3974_12400 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NIES3974_46370 glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NIES3974_35030 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NIES3974_16420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NIES3974_37050 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NIES3974_09720 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NIES3974_34950 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NIES3974_25110 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NIES3974_08190 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NIES3974_07990 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NIES3974_48490 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NIES3974_36230 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NIES3974_18790 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NIES3974_01270 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NIES3974_20690 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NIES3974_43410 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NIES3974_27670 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NIES3974_09830 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NIES3974_06750 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NIES3974_29530 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NIES3974_30440 phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NIES3974_17290 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NIES3974_02910 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cals03060]
D NIES3974_06300 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NIES3974_03310 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NIES3974_16210 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NIES3974_16910 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D NIES3974_16900 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D NIES3974_19630 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NIES3974_00140 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NIES3974_13470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NIES3974_10070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NIES3974_11840 anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D NIES3974_15580 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D NIES3974_40780 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D NIES3974_24930 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D NIES3974_06740 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NIES3974_12030 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NIES3974_03880 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cals04122]
D NIES3974_26570 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_28230 aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_31930 nifS; nitrogenase cofactor synthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_23370 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NIES3974_38260 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NIES3974_22800 moaE; molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NIES3974_07920 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NIES3974_21430 thiamineS K03636 moaD; sulfur-carrier protein
D NIES3974_34320 thiamine S protein K03636 moaD; sulfur-carrier protein
D NIES3974_39100 moeB; molybdopterin biosynthesis protein MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D NIES3974_48280 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NIES3974_21760 molybdenum cofactor synthesis domain-containing protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NIES3974_39530 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:cals03018]
D NIES3974_34180 ribonuclease E and G K08300 rne; ribonuclease E [EC:3.1.26.12]
D NIES3974_28000 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NIES3974_31300 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NIES3974_31560 3'-5' exoribonuclease, VacB and RNase II K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NIES3974_20030 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NIES3974_26730 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NIES3974_33310 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NIES3974_48600 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NIES3974_29020 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_04000 dnaK_1; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_08350 dnaK_2; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_38150 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_45770 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_28840 hypothetical protein K03666 hfq; host factor-I protein
D NIES3974_38190 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cals03030]
D NIES3974_01110 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_05150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_21670 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NIES3974_21380 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NIES3974_36930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NIES3974_39740 DNA polymerase IF1 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NIES3974_37770 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NIES3974_35020 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NIES3974_15060 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein
D NIES3974_23760 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NIES3974_34170 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NIES3974_14080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cals03410]
D NIES3974_03780 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NIES3974_38500 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NIES3974_46540 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NIES3974_01670 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NIES3974_32910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_41110 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_14080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cals03420]
D NIES3974_30390 transcriptional-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NIES3974_36370 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NIES3974_37970 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D NIES3974_16660 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NIES3974_44330 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NIES3974_06450 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NIES3974_14080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cals03430]
D NIES3974_43530 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NIES3974_09860 recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2
D NIES3974_20790 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D NIES3974_44330 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NIES3974_06450 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NIES3974_38650 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NIES3974_05810 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NIES3974_32910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_41110 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_15060 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein
D NIES3974_01110 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_05150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_39740 DNA polymerase IF1 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NIES3974_21670 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NIES3974_36930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NIES3974_21380 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NIES3974_14080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NIES3974_33040 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_33060 putative DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_00340 site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_08030 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cals03440]
D NIES3974_32910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_41110 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_15060 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein
D NIES3974_26270 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NIES3974_35380 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NIES3974_21840 recR; recombination protein RecR K06187 recR; recombination protein RecR
D NIES3974_38640 RecA protein K03553 recA; recombination protein RecA
D NIES3974_41940 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NIES3974_38310 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NIES3974_08250 ruvC; holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NIES3974_33020 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NIES3974_01110 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_05150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_39740 DNA polymerase IF1 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NIES3974_21670 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NIES3974_36930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NIES3974_21380 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NIES3974_43800 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cals02010]
D NIES3974_14990 sulfate ABC transporter periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NIES3974_14960 sulfate ABC transporter permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NIES3974_14950 sulfate ABC transporter inner membrane subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D NIES3974_17320 sulfate ABC transporter ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NIES3974_19250 nrtA; nitrate/nitrite transport system substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D NIES3974_07240 twin-arginine translocation pathway signal K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D NIES3974_19260 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D NIES3974_07250 nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein
D NIES3974_28440 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D NIES3974_19280 nitrate transport ATP-binding subunits C and D K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D NIES3974_45300 bicarbonate transport system substrate-binding protein K11950 cmpA; bicarbonate transport system substrate-binding protein
D NIES3974_45290 nitrate transport permease K11951 cmpB; bicarbonate transport system permease protein
D NIES3974_19270 nitrate transport ATP-binding subunits C and D K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D NIES3974_45270 nitrate transport ATP-binding subunits C and D K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D NIES3974_45260 nitrate ABC transporter, ATPase subunits C and D K11953 cmpD; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D NIES3974_16830 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NIES3974_16840 molybdate ABC transporter inner membrane subunit K02018 modB; molybdate transport system permease protein
D NIES3974_16850 Fe(3+)-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NIES3974_41610 ABC transporter, ferric iron-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D NIES3974_41600 putative ABC transporter ATP-binding protein K02011 afuB; iron(III) transport system permease protein
D NIES3974_41590 ABC transporter-related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NIES3974_08970 family 1 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NIES3974_36590 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D NIES3974_08960 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D NIES3974_08980 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D NIES3974_23320 substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D NIES3974_16630 permease protein of ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D NIES3974_30680 ABC transporter-related protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D NIES3974_40440 ABC transporter-related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NIES3974_10380 ABC transporter-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NIES3974_03390 ABC transporter, periplasmic sugar-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D NIES3974_38000 binding-protein-dependent transport systems inner membrane component K17245 chiF; putative chitobiose transport system permease protein
D NIES3974_42410 binding-protein-dependent transport systems inner membrane component K17246 chiG; putative chitobiose transport system permease protein
D NIES3974_31450 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NIES3974_29400 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NIES3974_39980 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NIES3974_31460 ABC transporter-related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NIES3974_15270 phosphate ABC transporter periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_16400 sphX; phosphate ABC transporter periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_37320 phosphate-binding protein PstS-like protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_45060 ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_46550 putative phosphate transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_46560 putative phosphate transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_15250 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D NIES3974_16390 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D NIES3974_15240 phosphate ABC transporter inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D NIES3974_16380 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D NIES3974_15230 phosphate ABC transporter ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NIES3974_15280 ABC transporter-related protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NIES3974_16370 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NIES3974_44930 phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D NIES3974_11060 phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D NIES3974_11040 phnE; phosphonate ABC transport permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D NIES3974_11050 phosphonate ABC transport ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D NIES3974_28680 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D NIES3974_40520 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D NIES3974_23670 branched-chain amino acid ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D NIES3974_23720 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D NIES3974_23730 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D NIES3974_16290 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D NIES3974_16300 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D NIES3974_06080 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D NIES3974_16280 cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D NIES3974_03890 BioY protein K03523 bioY; biotin transport system substrate-specific component
D NIES3974_18240 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D NIES3974_15680 ABC transporter-like protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D NIES3974_19440 ABC transporter-related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D NIES3974_37120 ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_38740 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_02200 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_05010 ABC-type transport protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_37130 ABC transporter ATP binding subunit K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_38760 ABC transporter-related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_02210 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_05020 ABC transporter-like protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_00480 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D NIES3974_00470 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NIES3974_47380 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NIES3974_47670 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NIES3974_27380 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NIES3974_43080 ABC transporter, transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NIES3974_43950 ABC transporter-related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D NIES3974_23090 ABC transporter-related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D NIES3974_20490 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_25630 hetC; heterocyst differentiation protein HetC K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41420 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41720 cyclic nucleotide-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_01860 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_40670 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
D NIES3974_24110 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
C 03070 Bacterial secretion system [PATH:cals03070]
D NIES3974_20520 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_41440 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_41730 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_01870 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_20490 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_25630 hetC; heterocyst differentiation protein HetC K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41420 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41720 cyclic nucleotide-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_01860 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_16910 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D NIES3974_16900 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D NIES3974_03310 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NIES3974_16210 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NIES3974_06300 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NIES3974_19630 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NIES3974_00140 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NIES3974_10070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NIES3974_13470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NIES3974_15580 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D NIES3974_40780 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D NIES3974_24930 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cals02020]
D NIES3974_26450 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NIES3974_26460 two-component response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NIES3974_03190 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NIES3974_15270 phosphate ABC transporter periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_16400 sphX; phosphate ABC transporter periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_37320 phosphate-binding protein PstS-like protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_45060 ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_46550 putative phosphate transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_46560 putative phosphate transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_18020 kdpD; potassium-dependent ATPase subunit D sensor protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D NIES3974_18060 kdpA; potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D NIES3974_30860 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D NIES3974_18050 K+-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D NIES3974_30880 potassium-dependent ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D NIES3974_18030 kdpC; potassium-transporting P-type ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D NIES3974_30900 K+ transporting ATPase, KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D NIES3974_08500 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D NIES3974_39730 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NIES3974_38240 integral membrane sensor signal transduction histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D NIES3974_12270 two component transcriptional regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D NIES3974_27890 multi-sensor signal transduction histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D NIES3974_23570 two component transcriptional regulator K11332 nblR; two-component system, OmpR family, response regulator NblR
D NIES3974_40790 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D NIES3974_39060 two component transcriptional regulator, winged helix family protein K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D NIES3974_12160 two component transcriptional regulator, winged helix family protein K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D NIES3974_45630 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NIES3974_28430 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NIES3974_14240 malic enzyme, NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D NIES3974_16690 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D NIES3974_03480 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D NIES3974_29200 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NIES3974_07880 general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D NIES3974_37500 [NiFe] uptake hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D NIES3974_37510 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D NIES3974_10740 two-component sensor histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D NIES3974_34500 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D NIES3974_34510 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D NIES3974_34480 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D NIES3974_34490 response regulator receiver, CheY K02658 pilH; twitching motility two-component system response regulator PilH
D NIES3974_15300 methyl-accepting chemotaxis sensory transducer with phytochrome sensor K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_15660 methyl accepting chemotaxis protein K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_39410 methyl-accepting chemotaxis protein K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_40110 methyl-accepting chemotaxis sensory transducer with phytochrome sensor K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_15310 putative CheW protein K11524 pixI; positive phototaxis protein PixI
D NIES3974_40100 CheW protein K11524 pixI; positive phototaxis protein PixI
D NIES3974_15290 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_15670 two-component hybrid sensor and regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_40150 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_15330 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_15640 response regulator receiver protein PatA K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_23770 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_33760 response regulator receiver protein PatA K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_40080 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_42730 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_15320 two-component system, regulatory protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_15650 two-component system, regulatory protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_40090 response regulator receiver, CheY K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_42740 response regulator receiver protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_13590 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D NIES3974_13580 two-component system, regulatory protein K11355 rcp1; two-component system, chemotaxis family, response regulator Rcp1
D NIES3974_02760 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NIES3974_27150 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D NIES3974_26050 GAF sensor signal transduction histidine kinase K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D NIES3974_14270 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NIES3974_14280 cydB; cytochrome D ubiquinol oxidase chain II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NIES3974_16090 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NIES3974_30950 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NIES3974_25760 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D NIES3974_01980 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D NIES3974_39500 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D NIES3974_19500 putative cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cals02024]
D NIES3974_28840 hypothetical protein K03666 hfq; host factor-I protein
D NIES3974_00390 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NIES3974_35100 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NIES3974_38820 glycosyl transferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D NIES3974_43240 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D NIES3974_19810 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D NIES3974_28680 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D NIES3974_40520 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D NIES3974_23670 branched-chain amino acid ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D NIES3974_23720 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D NIES3974_23730 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D NIES3974_38070 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NIES3974_02760 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NIES3974_03990 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NIES3974_16700 family 1 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NIES3974_40970 ABC transporter, oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NIES3974_12360 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NIES3974_16710 binding-protein-dependent transporter inner membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NIES3974_19290 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NIES3974_40950 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NIES3974_17120 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D NIES3974_40960 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D NIES3974_10030 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D NIES3974_03450 ABC transporter-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D NIES3974_11370 ABC transporter-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D NIES3974_19630 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NIES3974_07070 peptidase S8/S53 K14645 K14645; serine protease [EC:3.4.21.-]
D NIES3974_03310 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NIES3974_16210 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NIES3974_06300 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NIES3974_00140 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NIES3974_10070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NIES3974_13470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cals02030]
D NIES3974_34500 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D NIES3974_10740 two-component sensor histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
C 02040 Flagellar assembly
D NIES3974_07770 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NIES3974_43810 sigF; group 2 sigma 70-type sigma factor F K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NIES3974_28000 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cals04980]
D NIES3974_16340 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NIES3974_41470 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cals01501]
D NIES3974_21270 major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NIES3974_25070 major facilitator superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NIES3974_22200 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NIES3974_24260 peptidoglycan glycosyltransferase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_10500 peptidoglycan glycosyltransferase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_13500 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_17270 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_26210 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_45080 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NIES3974_09910 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cals01502]
D NIES3974_45630 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NIES3974_02530 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_02960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_15350 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NIES3974_37850 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NIES3974_21770 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NIES3974_02550 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NIES3974_28430 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cals01503]
D NIES3974_21940 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_28580 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_12600 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_17050 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cals01000]
C 01001 Protein kinases [BR:cals01001]
D NIES3974_36010 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D NIES3974_46730 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D NIES3974_47610 putative anti-sigma regulatory factor serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D NIES3974_36850 putative anti-sigma regulatory factor serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D NIES3974_17430 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_23310 pknA; serine/threonine kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_26250 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_45730 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_46230 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_46670 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_08610 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_36640 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D NIES3974_15710 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_34620 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_35460 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_43060 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_43150 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_43330 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_45100 lipopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_02170 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_05000 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_12320 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_26450 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NIES3974_18020 kdpD; potassium-dependent ATPase subunit D sensor protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D NIES3974_38240 integral membrane sensor signal transduction histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D NIES3974_27890 multi-sensor signal transduction histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D NIES3974_40790 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D NIES3974_18070 integral membrane sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D NIES3974_15290 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_15670 two-component hybrid sensor and regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_40150 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_13590 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D NIES3974_26050 GAF sensor signal transduction histidine kinase K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D NIES3974_06860 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cals01009]
D NIES3974_02500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NIES3974_10200 ATPase domain-containing protein K04079 HSP90A; molecular chaperone HtpG
D NIES3974_33520 protein-serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cals01002]
D NIES3974_03880 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D NIES3974_26530 peptidase A24A domain-containing protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NIES3974_37550 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D NIES3974_26750 hypothetical protein K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D NIES3974_09180 GMP synthase large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NIES3974_46190 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NIES3974_34050 ferredoxin-dependent glutamate synthase GltB K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D NIES3974_48610 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NIES3974_28810 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NIES3974_36460 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NIES3974_02380 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NIES3974_34240 abortive infection protein K07052 K07052; CAAX protease family protein
D NIES3974_00010 hypothetical protein K07052 K07052; CAAX protease family protein
D NIES3974_07670 abortive infection protein K07052 K07052; CAAX protease family protein
D NIES3974_09660 abortive infection protein K07052 K07052; CAAX protease family protein
D NIES3974_09760 hypothetical protein K07052 K07052; CAAX protease family protein
D NIES3974_04430 peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NIES3974_38120 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D NIES3974_28430 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NIES3974_45630 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NIES3974_01780 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D NIES3974_09060 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D NIES3974_46140 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NIES3974_15920 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NIES3974_28560 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NIES3974_12100 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NIES3974_19730 FtsH peptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_34920 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_00670 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_01250 FtsH peptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_45960 peptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D NIES3974_07070 peptidase S8/S53 K14645 K14645; serine protease [EC:3.4.21.-]
D NIES3974_19960 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D NIES3974_05300 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NIES3974_35340 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NIES3974_48560 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NIES3974_04290 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NIES3974_04300 ATP-dependent Clp protease-like protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NIES3974_34140 peptidase S16 lon domain-containing protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D NIES3974_33680 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NIES3974_06740 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NIES3974_12030 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NIES3974_24560 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D NIES3974_19350 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NIES3974_34280 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NIES3974_06580 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NIES3974_12800 peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NIES3974_35740 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D NIES3974_13880 protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D NIES3974_24410 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D NIES3974_26560 rhomboid-like protein K07059 K07059; rhomboid family protein
D NIES3974_06910 rhomboid family protein K07059 K07059; rhomboid family protein
D NIES3974_34900 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NIES3974_32990 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NIES3974_47710 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D NIES3974_22600 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D NIES3974_08670 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D NIES3974_08680 DNA gyrase modulator peptidase U62 K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:cals01003]
D NIES3974_23750 glycosyl transferase family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D NIES3974_40860 dolichyl-phosphate beta-d-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D NIES3974_26790 glycosyl transferase family protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D NIES3974_02710 glycosyl transferase family protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D NIES3974_14330 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D NIES3974_03020 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D NIES3974_17270 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_26210 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_34730 WecB/TagA/CpsF family glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D NIES3974_45190 glycosyl transferase, WecB/TagA/CpsF family protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D NIES3974_47640 WecB/TagA/CpsF family glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D NIES3974_45780 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_25530 family 4 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_06100 putative glucosyl transferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276]
D NIES3974_14920 group 1 glycosyl transferase K03867 BGLUT; UDP-glucose:tetrahydrobiopterin glucosyltransferase [EC:2.4.1.-]
D NIES3974_21890 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
D NIES3974_05240 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13]
D NIES3974_37100 putative glycosyltransferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cals01005]
D NIES3974_17050 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NIES3974_17060 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NIES3974_17030 UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NIES3974_15950 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NIES3974_38820 glycosyl transferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D NIES3974_34010 family 2 glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D NIES3974_45780 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NIES3974_25530 family 4 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cals01011]
D NIES3974_15150 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NIES3974_37190 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NIES3974_37200 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NIES3974_01610 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NIES3974_24180 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NIES3974_02530 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_02960 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NIES3974_15350 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NIES3974_12590 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NIES3974_34900 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NIES3974_21770 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NIES3974_02550 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NIES3974_13800 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NIES3974_35580 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D NIES3974_38440 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D NIES3974_17270 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_26210 1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NIES3974_45080 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NIES3974_09910 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NIES3974_05300 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NIES3974_45630 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NIES3974_28430 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NIES3974_46350 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NIES3974_32420 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NIES3974_08880 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NIES3974_13830 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NIES3974_27160 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NIES3974_41880 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NIES3974_43230 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NIES3974_01320 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D NIES3974_21940 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_28580 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_12600 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cals01004]
D NIES3974_48420 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NIES3974_40350 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NIES3974_48430 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NIES3974_26290 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NIES3974_11710 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NIES3974_45670 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NIES3974_17040 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NIES3974_07620 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NIES3974_16690 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D NIES3974_16670 fatty acid desaturase K10257 FAD3; acyl-lipid omega-3 desaturase [EC:1.14.19.25 1.14.19.35 1.14.19.36]
D NIES3974_16680 desD; delta 6 acyl-lipid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D NIES3974_16440 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NIES3974_38070 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NIES3974_48440 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NIES3974_36480 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NIES3974_24390 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cals01008]
D NIES3974_08800 isopenicillin-N epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:cals01006]
D NIES3974_15560 geranylgeranyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D NIES3974_12570 polyprenyl synthetase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D NIES3974_06690 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NIES3974_43260 pys; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D NIES3974_07790 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NIES3974_11660 UbiA prenyltransferase K09833 HPT; homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]
D NIES3974_00050 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NIES3974_08510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NIES3974_21470 bacteriochlorophyll/chlorophyll a synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:cals01007]
D NIES3974_37390 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NIES3974_17290 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NIES3974_02910 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NIES3974_07990 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NIES3974_27670 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NIES3974_48490 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NIES3974_20690 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NIES3974_18790 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NIES3974_01270 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NIES3974_43410 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NIES3974_16420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NIES3974_37050 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NIES3974_06750 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NIES3974_09720 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NIES3974_34950 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NIES3974_08190 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NIES3974_09830 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NIES3974_25110 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NIES3974_35030 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NIES3974_29530 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NIES3974_30440 phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NIES3974_21690 class III aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NIES3974_37730 L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D NIES3974_46390 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D NIES3974_03100 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_06990 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NIES3974_36760 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NIES3974_11090 aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D NIES3974_40060 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NIES3974_24600 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D NIES3974_17400 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NIES3974_23150 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NIES3974_44000 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D NIES3974_28710 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:cals00199]
D NIES3974_43450 cytochrome P450 K23139 CYP110; cytochrome P450 family 110 [EC:1.14.-.-]
D NIES3974_01790 cytochrome P450 K24392 CYP120A1; retinoid hydroxylase
C 00194 Photosynthesis proteins [BR:cals00194]
D NIES3974_22660 psbAI_2; photosystem II D1 protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_30140 Photosystem II reaction centre protein PsbA/D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_05820 photosystem Q(B) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_10630 photosystem Q(B) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_10640 photosystem Q(B) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_13820 psbAI_1; photosystem II D1 protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D NIES3974_15700 Photosystem II reaction centre protein PsbD/D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D NIES3974_02670 Photosystem II reaction centre protein PsbD/D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D NIES3974_10570 psbD-2; photosystem II D2 protein K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D NIES3974_02680 photosystem II 44 kDa subunit reaction center protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_07160 photosystem II CP43 protein PsbC homolog K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_07180 photosystem II CP43 protein PsbC homolog K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_07190 photosystem II CP43 protein PsbC homolog K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_10560 psbC; photosystem II CP43 protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D NIES3974_35920 photosystem II chlorophyll-binding protein CP47 K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D NIES3974_10540 psbB; photosystem II P680 chlorophyll A apoprotein K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D NIES3974_11340 cytochrome b559 alpha subunit K02707 psbE; photosystem II cytochrome b559 subunit alpha
D NIES3974_11350 cytochrome b559 beta subunit K02708 psbF; photosystem II cytochrome b559 subunit beta
D NIES3974_11360 photosystem II PsbJ protein K02711 psbJ; photosystem II PsbJ protein
D NIES3974_43820 photosystem II phosphoprotein PsbH K02709 psbH; photosystem II PsbH protein
D NIES3974_04200 photosystem II reaction center I protein PsbI K02710 psbI; photosystem II PsbI protein
D NIES3974_33210 photosystem II reaction center protein PsbK precursor K02712 psbK; photosystem II PsbK protein
D NIES3974_33230 photosystem II reaction center protein PsbM K02714 psbM; photosystem II PsbM protein
D NIES3974_47030 PsbZ protein K02724 psbZ; photosystem II PsbZ protein
D NIES3974_09100 pbsY; photosystem II protein Y K02723 psbY; photosystem II PsbY protein
D NIES3974_01940 photosystem II 11 kD protein K08902 psb27; photosystem II Psb27 protein
D NIES3974_21750 psbW; photosystem II protein W K08903 psb28; photosystem II 13kDa protein
D NIES3974_30280 photosystem II manganese-stabilizing protein PsbO K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D NIES3974_38090 photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D NIES3974_45750 cytochrome c class I K02720 psbV; photosystem II cytochrome c550
D NIES3974_01150 photosystem II complex extrinsic protein precursor PsuB K02719 psbU; photosystem II PsbU protein
D NIES3974_10490 photosystem II protein PsbW, class I K08904 psb28-2; photosystem II Psb28-2 protein
D NIES3974_08010 psaA; photosystem I core protein A1 K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D NIES3974_08560 PsaA protein K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D NIES3974_08020 photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D NIES3974_08570 psaB; P700 apoprotein subunit Ib K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D NIES3974_10470 photosystem I subunit VII K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D NIES3974_00400 psaD; photosystem I reaction center subunit II K02692 psaD; photosystem I subunit II
D NIES3974_38510 psaE; photosystem I protein E K02693 psaE; photosystem I subunit IV
D NIES3974_10530 photosystem I reaction center protein PsaF subunit III K02694 psaF; photosystem I subunit III
D NIES3974_12480 photosystem I reaction center protein PsaF subunit III K02694 psaF; photosystem I subunit III
D NIES3974_08590 psaI; photosystem I subunit VIII K02696 psaI; photosystem I subunit VIII
D NIES3974_10520 psaJ; photosystem I reaction center subunit IX K02697 psaJ; photosystem I subunit IX
D NIES3974_12490 photosystem I reaction centre subunit IX/PsaJ K02697 psaJ; photosystem I subunit IX
D NIES3974_39230 hypothetical protein K02698 psaK; photosystem I subunit X
D NIES3974_04770 photosystem I reaction center subunit PsaK K02698 psaK; photosystem I subunit X
D NIES3974_08580 photosystem I reaction center protein subunit XI K02699 psaL; photosystem I subunit XI
D NIES3974_12500 photosystem I reaction centre subunit XI/PsaL K02699 psaL; photosystem I subunit XI
D NIES3974_17470 photosystem I M family protein K02700 psaM; photosystem I subunit XII
D NIES3974_29290 psaX; photosystem I 4.8K protein PsaX K02702 psaX; photosystem I 4.8kDa protein
D NIES3974_48360 petA; apocytochrome f K02634 petA; apocytochrome f
D NIES3974_36870 cytochrome b6 K02635 petB; cytochrome b6
D NIES3974_48370 cytochrome b6/f complex Fe-S subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D NIES3974_05160 Rieske [2Fe-2S] domain-containing protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D NIES3974_36860 cytochrome b/b6-like protein K02637 petD; cytochrome b6-f complex subunit 4
D NIES3974_27010 cytochrome b6f complex subunit PetL K02642 petL; cytochrome b6-f complex subunit 6
D NIES3974_26970 PetM of cytochrome b6f complex subunit 7 K02643 petM; cytochrome b6-f complex subunit 7
D NIES3974_45740 plastocyanin K02638 petE; plastocyanin
D NIES3974_14720 petF; ferredoxin I, essential for growth K02639 petF; ferredoxin
D NIES3974_28720 2Fe-2S ferredoxin K02639 petF; ferredoxin
D NIES3974_32280 2Fe-2S ferredoxin K02639 petF; ferredoxin
D NIES3974_13300 2Fe-2S ferredoxin K02639 petF; ferredoxin
D NIES3974_02600 oxidoreductase FAD/NAD(P)-binding subunit K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D NIES3974_18010 cytochrome c class I K08906 petJ; cytochrome c6
D NIES3974_33830 petJ; cytochrome c6 K08906 petJ; cytochrome c6
D NIES3974_45590 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NIES3974_45580 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NIES3974_25230 ATP synthase F1 subuint gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NIES3974_25240 ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NIES3974_25250 ATP synthase F1 subuint delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NIES3974_25260 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NIES3974_25270 H+-transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NIES3974_25280 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NIES3974_25290 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NIES3974_25300 putative ATP synthase protein I K02116 atpI; ATP synthase protein I
D NIES3974_25380 phycocyanin K02092 apcA; allophycocyanin alpha subunit
D NIES3974_25390 allophycocyanin beta subunit K02093 apcB; allophycocyanin beta subunit
D NIES3974_10610 apcB; allophycocyanin beta subunit K02093 apcB; allophycocyanin beta subunit
D NIES3974_25400 CpcD phycobilisome linker-like protein K02094 apcC; phycobilisome core linker protein
D NIES3974_37410 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_10580 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_10600 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_10620 phycobilisome protein K02095 apcD; allophycocyanin-B
D NIES3974_25360 phycobilisome protein K02096 apcE; phycobilisome core-membrane linker protein
D NIES3974_10590 apcE_1; phycobilisome core-membrane linker polypeptide K02096 apcE; phycobilisome core-membrane linker protein
D NIES3974_29210 allophycocyanin beta subunit K02097 apcF; phycobilisome core component
D NIES3974_44820 C-phycocyanin-1 alpha chain K02284 cpcA; phycocyanin alpha chain
D NIES3974_44810 cpcB1; phycocyanin beta subunit K02285 cpcB; phycocyanin beta chain
D NIES3974_44830 phycobilisome linker polypeptide CpcC2 K02286 cpcC; phycocyanin-associated rod linker protein
D NIES3974_44840 phycobilisome linker polypeptide CpcC K02286 cpcC; phycocyanin-associated rod linker protein
D NIES3974_44850 CpcD phycobilisome linker domain protein K02287 cpcD; phycocyanin-associated, rod
D NIES3974_44860 HEAT repeat-containing PBS lyase K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D NIES3974_44870 HEAT domain-containing protein K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32]
D NIES3974_44540 phycobilisome linker polypeptide CpcG2 K02290 cpcG; phycobilisome rod-core linker protein
D NIES3974_04230 phycobilisome linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D NIES3974_04240 phycobilisome linker polypeptide K02290 cpcG; phycobilisome rod-core linker protein
D NIES3974_12890 phycobilisome protein CpeA K05376 cpeA; phycoerythrin alpha chain
D NIES3974_12880 phycobilisome protein K05377 cpeB; phycoerythrin beta chain
D NIES3974_21810 phycobilisome linker polypeptide K05378 cpeC; phycoerythrin-associated linker protein
D NIES3974_06560 cpeC; phycoerythrin-associated linker protein CpeC K05378 cpeC; phycoerythrin-associated linker protein
D NIES3974_21800 phycobilisome linker polypeptide K05379 cpeD; phycoerythrin-associated linker protein
D NIES3974_17550 phycoerythrin-associated linker protein, CpeR K05381 cpeR; phycoerythrin-associated linker protein
D NIES3974_44550 phycoerythrin-associated linker protein, CpeR K05381 cpeR; phycoerythrin-associated linker protein
D NIES3974_17570 putative phycoerythrin-associated linker protein, CpeS K05382 cpeS; phycoerythrin-associated linker protein
D NIES3974_17560 CpeT protein K05383 cpeT; CpeT protein
D NIES3974_35260 HEAT repeat-containing PBS lyase K05384 cpeU; bilin biosynthesis protein
D NIES3974_35280 HEAT repeat-containing PBS lyase K05385 cpeY; bilin biosynthesis protein
D NIES3974_15630 HEAT repeat-containing PBS lyase K05386 cpeZ; bilin biosynthesis protein
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cals03000]
D NIES3974_17070 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_24060 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_09450 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_22650 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NIES3974_47950 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NIES3974_07750 ndhF3 operon transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D NIES3974_13050 transcriptional regulator LysR family protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D NIES3974_37650 hypothetical protein K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor
D NIES3974_48530 GntR family transcriptional regulator K07978 plmA; GntR family transcriptional regulator
D NIES3974_24500 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NIES3974_26020 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NIES3974_38720 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NIES3974_42160 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NIES3974_33470 ferric uptake regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D NIES3974_02760 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NIES3974_07630 transcriptional regulator NtcA K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D NIES3974_29500 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D NIES3974_07510 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D NIES3974_42000 ziaR; zinc-responsive repressor ZiaR K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D NIES3974_08170 PadR-like family transcriptional regulator K26743 pex; PadR family transcriptional regulator, circadian period extender
D NIES3974_33700 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NIES3974_47540 putative delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NIES3974_36070 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D NIES3974_47270 transcriptional activator, TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D NIES3974_33440 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
C 03021 Transcription machinery [BR:cals03021]
D NIES3974_06360 DNA-directed RNA polymerase, alpha subunit RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NIES3974_16770 DNA-directed RNA polymerase, beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NIES3974_16790 rpoC1; RNA polymerase gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NIES3974_16800 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NIES3974_44090 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NIES3974_07770 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NIES3974_43810 sigF; group 2 sigma 70-type sigma factor F K03086 rpoD; RNA polymerase primary sigma factor
D NIES3974_26010 RpoD family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D NIES3974_44070 RpoD subfamily RNA polymerase sigma 70 subunit K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D NIES3974_48060 sigD; group 2 sigma 70-type sigma factor D K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D NIES3974_04980 sigB; group 2 RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D NIES3974_30250 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D NIES3974_33300 RNA polymerase sigma-37 factor K03090 sigB; RNA polymerase sigma-B factor
D NIES3974_18600 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NIES3974_10080 nusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB
D NIES3974_03300 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NIES3974_29130 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D NIES3974_10060 serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D NIES3974_24710 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D NIES3974_11770 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D NIES3974_47610 putative anti-sigma regulatory factor serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D NIES3974_36850 putative anti-sigma regulatory factor serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
C 03019 Messenger RNA biogenesis [BR:cals03019]
D NIES3974_34180 ribonuclease E and G K08300 rne; ribonuclease E [EC:3.1.26.12]
D NIES3974_44560 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NIES3974_06800 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NIES3974_48600 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NIES3974_31560 3'-5' exoribonuclease, VacB and RNase II K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NIES3974_20030 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NIES3974_26730 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NIES3974_33310 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NIES3974_28000 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NIES3974_31300 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NIES3974_29020 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_04000 dnaK_1; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_08350 dnaK_2; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_38150 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_45770 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_28840 hypothetical protein K03666 hfq; host factor-I protein
D NIES3974_38190 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 03041 Spliceosome
C 03011 Ribosome [BR:cals03011]
D NIES3974_35930 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NIES3974_48510 RNA-binding S1 domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D NIES3974_35760 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NIES3974_06180 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NIES3974_37360 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NIES3974_06280 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NIES3974_14650 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NIES3974_34100 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NIES3974_06250 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NIES3974_06400 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NIES3974_34130 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NIES3974_06350 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NIES3974_34090 ribosomal protein S12/S23 K02950 RP-S12; small subunit ribosomal protein S12
D NIES3974_06340 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NIES3974_06500 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NIES3974_11800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NIES3974_19890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NIES3974_06210 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NIES3974_01690 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NIES3974_06160 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NIES3974_16750 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NIES3974_24290 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NIES3974_31690 rps21; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NIES3974_26320 hypothetical protein K19032 PSRP3; 30S ribosomal protein 3
D NIES3974_03280 rpl1; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NIES3974_06150 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NIES3974_06120 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NIES3974_06130 rpl4; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NIES3974_06240 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NIES3974_06260 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NIES3974_27330 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NIES3974_03270 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NIES3974_03290 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NIES3974_03260 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NIES3974_06390 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NIES3974_06220 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NIES3974_06290 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NIES3974_06190 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NIES3974_06370 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NIES3974_06270 rpl18; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NIES3974_03330 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NIES3974_29380 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NIES3974_21560 rpl21; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NIES3974_06170 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NIES3974_06140 ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D NIES3974_06230 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NIES3974_21570 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NIES3974_10190 rpl28; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NIES3974_06200 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NIES3974_06410 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NIES3974_17170 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NIES3974_19600 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NIES3974_29390 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NIES3974_18770 ribosomal protein L25-like protein K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:cals03009]
D NIES3974_44560 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NIES3974_06800 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NIES3974_24690 small GTP-binding protein K03595 era; GTPase
D NIES3974_37690 GTP-binding protein K03595 era; GTPase
D NIES3974_14860 small GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D NIES3974_18600 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NIES3974_10080 nusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB
D NIES3974_03300 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NIES3974_33880 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NIES3974_46990 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NIES3974_46090 Fmu, rRNA SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NIES3974_26770 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NIES3974_20720 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NIES3974_16040 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NIES3974_36160 hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NIES3974_03730 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NIES3974_13080 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D NIES3974_31010 TrmA family RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NIES3974_00830 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NIES3974_24230 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NIES3974_24570 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NIES3974_33740 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NIES3974_11400 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D NIES3974_06720 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D NIES3974_40040 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D NIES3974_14710 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D NIES3974_20040 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D NIES3974_28020 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D NIES3974_33550 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D NIES3974_34180 ribonuclease E and G K08300 rne; ribonuclease E [EC:3.1.26.12]
D NIES3974_27570 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NIES3974_31020 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D NIES3974_20030 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NIES3974_20220 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NIES3974_25910 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NIES3974_18230 small GTP-binding protein K03977 engA; GTPase
D NIES3974_24460 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D NIES3974_22680 GTP-binding protein HflX K03665 hflX; GTPase
D NIES3974_40250 SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NIES3974_36190 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NIES3974_00360 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D NIES3974_18590 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D NIES3974_22370 iojap-like protein K09710 ybeB; ribosome-associated protein
D NIES3974_35120 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D NIES3974_44390 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D NIES3974_19650 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cals03016]
D NIES3974_18320 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D NIES3974_14850 polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D NIES3974_22810 polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D NIES3974_05880 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D NIES3974_37390 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NIES3974_09830 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NIES3974_20690 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NIES3974_01270 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NIES3974_48490 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NIES3974_27670 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NIES3974_43410 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NIES3974_16420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NIES3974_35030 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NIES3974_37050 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NIES3974_25110 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NIES3974_08190 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NIES3974_07990 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NIES3974_18790 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NIES3974_06750 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NIES3974_29530 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NIES3974_30440 phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NIES3974_17290 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NIES3974_02910 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NIES3974_20230 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D NIES3974_10000 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NIES3974_07340 trmB; tRNA (guanine-N(7))-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NIES3974_06380 tRNA-pseudouridine synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NIES3974_12950 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NIES3974_26570 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_28230 aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_31930 nifS; nitrogenase cofactor synthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_40250 SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NIES3974_07790 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NIES3974_31240 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D NIES3974_26660 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NIES3974_08310 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NIES3974_19610 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NIES3974_04780 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NIES3974_01680 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D NIES3974_24880 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NIES3974_38390 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NIES3974_09720 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NIES3974_34950 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NIES3974_42660 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NIES3974_42420 dihydrouridine synthase TIM-barrel protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D NIES3974_16270 RNA modification protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NIES3974_40660 putative methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D NIES3974_12180 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D NIES3974_10510 TrmA family RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D NIES3974_29640 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D NIES3974_24420 tRNA methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NIES3974_24950 tRNA/rRNA methyltransferase SpoU K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D NIES3974_14070 tRNA/rRNA methyltransferase SpoU K03437 spoU; RNA methyltransferase, TrmH family
D NIES3974_24570 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NIES3974_38260 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NIES3974_32290 HesB/YadR/YfhF-family protein K13628 iscA; iron-sulfur cluster assembly protein
D NIES3974_43620 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D NIES3974_02510 glycine cleavage T-protein K06980 ygfZ; tRNA-modifying protein YgfZ
D NIES3974_14180 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D NIES3974_33250 queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D NIES3974_23230 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NIES3974_31780 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NIES3974_22400 radical SAM domain-containing protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NIES3974_25460 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NIES3974_22310 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D NIES3974_38590 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NIES3974_18180 PP-loop protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D NIES3974_24590 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D NIES3974_12470 sialoglycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NIES3974_27310 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NIES3974_31560 3'-5' exoribonuclease, VacB and RNase II K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NIES3974_31300 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NIES3974_46770 PilT domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:cals03012]
D NIES3974_11210 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D NIES3974_18620 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NIES3974_40540 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NIES3974_14740 ABC transporter-like protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D NIES3974_26800 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D NIES3974_35770 translation elongation factor Ts K02357 tsf; elongation factor Ts
D NIES3974_34120 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NIES3974_31980 translation elongation factor G K02355 fusA; elongation factor G
D NIES3974_34110 translation elongation factor G K02355 fusA; elongation factor G
D NIES3974_34290 elongation factor G K02355 fusA; elongation factor G
D NIES3974_06420 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NIES3974_25880 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D NIES3974_47390 HemK family modification methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NIES3974_15590 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NIES3974_06330 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NIES3974_47340 translation elongation factor P K02356 efp; elongation factor P
D NIES3974_01730 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D NIES3974_41360 peptide-chain-release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cals03110]
D NIES3974_19870 ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NIES3974_38690 clpB_2; endopeptidase Clp ATP-binding chain K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NIES3974_31430 UvrB/UvrC protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D NIES3974_06730 clpB_1; endopeptidase Clp ATP-binding chain K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D NIES3974_48550 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NIES3974_10200 ATPase domain-containing protein K04079 HSP90A; molecular chaperone HtpG
D NIES3974_29020 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_04000 dnaK_1; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_08350 dnaK_2; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_38150 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_45770 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_20200 chaperone DnaJ protein K03686 dnaJ; molecular chaperone DnaJ
D NIES3974_47450 heat shock protein DnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D NIES3974_40470 heat shock protein DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D NIES3974_08340 chaperone DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D NIES3974_01390 33kD chaperonin, heat shock protein HSP33 K04083 hslO; molecular chaperone Hsp33
D NIES3974_29010 GrpE protein K03687 GRPE; molecular chaperone GrpE
D NIES3974_33290 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D NIES3974_38630 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D NIES3974_03490 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D NIES3974_38160 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D NIES3974_19730 FtsH peptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_34920 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_00670 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_01250 FtsH peptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NIES3974_25290 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NIES3974_39040 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D NIES3974_39290 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D NIES3974_39300 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D NIES3974_07070 peptidase S8/S53 K14645 K14645; serine protease [EC:3.4.21.-]
D NIES3974_11720 peptidyl-prolyl cis-trans isomerase cyclophilin type peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D NIES3974_35850 thioredoxin K03671 TXN; thioredoxin
D NIES3974_36690 thioredoxin-related K03671 TXN; thioredoxin
D NIES3974_00910 thioredoxin domain-containing protein K03671 TXN; thioredoxin
D NIES3974_07580 thioredoxin K03671 TXN; thioredoxin
D NIES3974_32410 glutaredoxin K03676 grxC; glutaredoxin 3
D NIES3974_02110 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D NIES3974_42610 glutaredoxin related protein K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:cals04131]
D NIES3974_20840 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NIES3974_42460 band 7 protein K07192 FLOT; flotillin
D NIES3974_05800 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D NIES3974_11840 anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D NIES3974_14200 glycosyl hydrolase 38 protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D NIES3974_14940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NIES3974_15110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_07350 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_10200 ATPase domain-containing protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cals03051]
D NIES3974_10200 ATPase domain-containing protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cals03032]
D NIES3974_23760 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NIES3974_17070 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_24060 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_09450 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_37090 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NIES3974_39730 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NIES3974_37770 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NIES3974_35020 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NIES3974_15060 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein
D NIES3974_01110 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_05150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_39740 DNA polymerase IF1 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NIES3974_36930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NIES3974_21380 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NIES3974_21670 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NIES3974_34170 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NIES3974_14080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NIES3974_33040 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_33060 putative DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_00340 site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_08030 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_23300 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NIES3974_12670 DNA topoisomerase chain A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NIES3974_07780 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NIES3974_14570 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NIES3974_43350 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cals03036]
D NIES3974_17070 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_24060 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_09450 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_44560 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NIES3974_06800 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NIES3974_42460 band 7 protein K07192 FLOT; flotillin
D NIES3974_37090 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NIES3974_40470 heat shock protein DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D NIES3974_08340 chaperone DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D NIES3974_39730 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NIES3974_33950 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D NIES3974_48090 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D NIES3974_12380 ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D NIES3974_28840 hypothetical protein K03666 hfq; host factor-I protein
D NIES3974_01590 chromosome segregation protein K03529 smc; chromosome segregation protein
D NIES3974_39890 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D NIES3974_36800 hypothetical protein K06024 scpB; segregation and condensation protein B
D NIES3974_47670 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NIES3974_09910 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NIES3974_30320 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D NIES3974_25410 cell cycle protein K03588 ftsW; cell division protein FtsW
D NIES3974_47380 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NIES3974_30330 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NIES3974_21940 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_28580 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_12600 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NIES3974_36280 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D NIES3974_36270 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D NIES3974_36260 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D NIES3974_35320 hypothetical protein K09772 sepF; cell division inhibitor SepF
D NIES3974_15070 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NIES3974_15080 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D NIES3974_24750 cell cycle protein K05837 rodA; rod shape determining protein RodA
D NIES3974_22770 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D NIES3974_46630 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D NIES3974_46920 chromosome partitioning protein, ParA family K03496 parA; chromosome partitioning protein
D NIES3974_26660 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NIES3974_16040 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NIES3974_29640 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D NIES3974_24740 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:cals03400]
D NIES3974_26110 deoxyribodipyrimidine photolyase-like protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D NIES3974_36530 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D NIES3974_03780 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NIES3974_14750 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NIES3974_28940 mutator MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NIES3974_40420 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NIES3974_09820 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D NIES3974_46540 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NIES3974_38500 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NIES3974_01670 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NIES3974_30670 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D NIES3974_32910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_41110 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NIES3974_14080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NIES3974_36370 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NIES3974_37970 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D NIES3974_16660 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NIES3974_44330 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NIES3974_06450 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NIES3974_16770 DNA-directed RNA polymerase, beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NIES3974_16790 rpoC1; RNA polymerase gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NIES3974_16800 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NIES3974_06360 DNA-directed RNA polymerase, alpha subunit RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NIES3974_44090 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NIES3974_30390 transcriptional-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NIES3974_43530 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NIES3974_09860 recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2
D NIES3974_20790 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D NIES3974_38650 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NIES3974_05810 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NIES3974_01110 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_05150 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NIES3974_39740 DNA polymerase IF1 subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NIES3974_36930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NIES3974_21380 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NIES3974_21670 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NIES3974_15060 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein
D NIES3974_33040 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_33060 putative DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_00340 site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_08030 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_38640 RecA protein K03553 recA; recombination protein RecA
D NIES3974_41940 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NIES3974_38310 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NIES3974_08250 ruvC; holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NIES3974_43800 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NIES3974_08110 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D NIES3974_31360 hypothetical protein K03547 sbcD; DNA repair protein SbcD/Mre11
D NIES3974_12150 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NIES3974_26270 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NIES3974_33020 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NIES3974_35380 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NIES3974_21840 recR; recombination protein RecR K06187 recR; recombination protein RecR
D NIES3974_38280 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D NIES3974_45840 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D NIES3974_10250 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D NIES3974_23300 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NIES3974_12670 DNA topoisomerase chain A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NIES3974_07780 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NIES3974_14570 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NIES3974_43350 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NIES3974_37090 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NIES3974_26730 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NIES3974_33310 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NIES3974_33680 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NIES3974_01060 putative ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NIES3974_44610 DEAD/DEAH box helicase-like protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
C 03029 Mitochondrial biogenesis [BR:cals03029]
D NIES3974_18620 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NIES3974_40540 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NIES3974_35770 translation elongation factor Ts K02357 tsf; elongation factor Ts
D NIES3974_34120 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NIES3974_31980 translation elongation factor G K02355 fusA; elongation factor G
D NIES3974_34110 translation elongation factor G K02355 fusA; elongation factor G
D NIES3974_34290 elongation factor G K02355 fusA; elongation factor G
D NIES3974_24690 small GTP-binding protein K03595 era; GTPase
D NIES3974_37690 GTP-binding protein K03595 era; GTPase
D NIES3974_17290 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NIES3974_01270 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NIES3974_16420 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NIES3974_27670 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NIES3974_21980 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NIES3974_35950 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NIES3974_12400 glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NIES3974_46370 glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NIES3974_15060 single-strand-binding protein K03111 ssb; single-strand DNA-binding protein
D NIES3974_17020 surface antigen D15 domain-containing protein K07277 SAM50; outer membrane protein insertion porin family
D NIES3974_01370 surface antigen D15 domain-containing protein K07277 SAM50; outer membrane protein insertion porin family
D NIES3974_29020 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_04000 dnaK_1; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_08350 dnaK_2; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_29010 GrpE protein K03687 GRPE; molecular chaperone GrpE
D NIES3974_38150 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_45770 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_38160 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D NIES3974_20200 chaperone DnaJ protein K03686 dnaJ; molecular chaperone DnaJ
D NIES3974_47450 heat shock protein DnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D NIES3974_26570 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_28230 aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_31930 nifS; nitrogenase cofactor synthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_42610 glutaredoxin related protein K07390 grxD; monothiol glutaredoxin
D NIES3974_24740 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NIES3974_08510 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NIES3974_08500 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D NIES3974_19630 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NIES3974_10200 ATPase domain-containing protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cals02000]
D NIES3974_27380 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NIES3974_43080 ABC transporter, transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NIES3974_43950 ABC transporter-related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D NIES3974_23090 ABC transporter-related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D NIES3974_20490 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_25630 hetC; heterocyst differentiation protein HetC K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41420 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41720 cyclic nucleotide-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_01860 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_20710 ABC transporter-related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NIES3974_21720 ABC transporter, transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NIES3974_34580 toxin secretion ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NIES3974_13660 ABC transporter HlyB/MsbA family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NIES3974_44380 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D NIES3974_40670 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D NIES3974_05220 ABC transporter-like protein K15738 uup; ABC transport system ATP-binding/permease protein
D NIES3974_14990 sulfate ABC transporter periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NIES3974_14960 sulfate ABC transporter permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NIES3974_14950 sulfate ABC transporter inner membrane subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D NIES3974_17320 sulfate ABC transporter ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NIES3974_16830 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NIES3974_16840 molybdate ABC transporter inner membrane subunit K02018 modB; molybdate transport system permease protein
D NIES3974_16850 Fe(3+)-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NIES3974_19250 nrtA; nitrate/nitrite transport system substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D NIES3974_07240 twin-arginine translocation pathway signal K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D NIES3974_19260 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D NIES3974_07250 nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein
D NIES3974_28440 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D NIES3974_19280 nitrate transport ATP-binding subunits C and D K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D NIES3974_45300 bicarbonate transport system substrate-binding protein K11950 cmpA; bicarbonate transport system substrate-binding protein
D NIES3974_45290 nitrate transport permease K11951 cmpB; bicarbonate transport system permease protein
D NIES3974_19270 nitrate transport ATP-binding subunits C and D K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D NIES3974_45270 nitrate transport ATP-binding subunits C and D K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D NIES3974_45260 nitrate ABC transporter, ATPase subunits C and D K11953 cmpD; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D NIES3974_41610 ABC transporter, ferric iron-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D NIES3974_41600 putative ABC transporter ATP-binding protein K02011 afuB; iron(III) transport system permease protein
D NIES3974_41590 ABC transporter-related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NIES3974_08970 family 1 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NIES3974_36590 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D NIES3974_08960 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D NIES3974_08980 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D NIES3974_19810 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D NIES3974_23320 substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D NIES3974_16630 permease protein of ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D NIES3974_30680 ABC transporter-related protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D NIES3974_13320 NitT/TauT family ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D NIES3974_13330 NitT/TauT family ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D NIES3974_40440 ABC transporter-related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NIES3974_10380 ABC transporter-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NIES3974_03390 ABC transporter, periplasmic sugar-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D NIES3974_38000 binding-protein-dependent transport systems inner membrane component K17245 chiF; putative chitobiose transport system permease protein
D NIES3974_42410 binding-protein-dependent transport systems inner membrane component K17246 chiG; putative chitobiose transport system permease protein
D NIES3974_47120 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D NIES3974_31450 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NIES3974_29400 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NIES3974_39980 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NIES3974_31460 ABC transporter-related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NIES3974_35220 sugar transport system, sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D NIES3974_12620 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D NIES3974_29040 sugar ABC transport system, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D NIES3974_01220 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D NIES3974_24240 sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D NIES3974_39160 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D NIES3974_15270 phosphate ABC transporter periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_16400 sphX; phosphate ABC transporter periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_37320 phosphate-binding protein PstS-like protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_45060 ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_46550 putative phosphate transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_46560 putative phosphate transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NIES3974_15250 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D NIES3974_16390 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D NIES3974_15240 phosphate ABC transporter inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D NIES3974_16380 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D NIES3974_15230 phosphate ABC transporter ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NIES3974_15280 ABC transporter-related protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NIES3974_16370 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NIES3974_44930 phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D NIES3974_11060 phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D NIES3974_11040 phnE; phosphonate ABC transport permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D NIES3974_11050 phosphonate ABC transport ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D NIES3974_28680 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D NIES3974_40520 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D NIES3974_23670 branched-chain amino acid ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D NIES3974_23720 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D NIES3974_23730 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D NIES3974_29360 glnH; glutamine ABC transporter, glutamine-binding protein GlnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D NIES3974_16700 family 1 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NIES3974_40970 ABC transporter, oligopeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NIES3974_12360 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NIES3974_16710 binding-protein-dependent transporter inner membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NIES3974_19290 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NIES3974_40950 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NIES3974_17120 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D NIES3974_40960 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D NIES3974_10030 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D NIES3974_03450 ABC transporter-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D NIES3974_11370 ABC transporter-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D NIES3974_42200 ferrichrome ABC transporter, ferrichrome-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D NIES3974_05640 ABC transporter iron binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D NIES3974_06660 putative iron transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D NIES3974_10860 ABC transporter iron binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D NIES3974_42170 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D NIES3974_42180 ABC transporter-related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D NIES3974_42040 ABC transporter, periplasmic-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D NIES3974_43920 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D NIES3974_32180 periplasmic solute binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D NIES3974_44040 periplasmic solute binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D NIES3974_32200 ABC transporter permease protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D NIES3974_44010 ABC-3 protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D NIES3974_32190 ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D NIES3974_44030 ABC transporter-related protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D NIES3974_16290 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D NIES3974_16300 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D NIES3974_06080 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D NIES3974_16280 cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D NIES3974_03890 BioY protein K03523 bioY; biotin transport system substrate-specific component
D NIES3974_18240 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D NIES3974_15680 ABC transporter-like protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D NIES3974_19440 ABC transporter-related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D NIES3974_07040 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D NIES3974_37120 ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_38740 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_02200 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_05010 ABC-type transport protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D NIES3974_37130 ABC transporter ATP binding subunit K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_38760 ABC transporter-related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_02210 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_05020 ABC transporter-like protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NIES3974_00480 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D NIES3974_00470 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NIES3974_14500 putative ABC-2 type transport system permease protein K25151 gldF; gliding motility-associated transport system permease protein
D NIES3974_14490 ABC transporter-related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D NIES3974_14510 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D NIES3974_29470 DevC protein K25169 devC; heterocyst specific transport system permease protein
D NIES3974_29460 ABC transporter-like protein K25170 devA; heterocyst specific system ATP-binding protein
D NIES3974_34570 DevA like ABC transporter ATPase component K25170 devA; heterocyst specific system ATP-binding protein
D NIES3974_29480 HlyD family secretion protein K25171 devB; membrane fusion protein DevB
D NIES3974_42310 hypothetical protein K25172 hgdD; heterocyst glycolipid deposition protein
D NIES3974_12640 outer membrane efflux protein K25172 hgdD; heterocyst glycolipid deposition protein
D NIES3974_47380 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NIES3974_47670 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NIES3974_32560 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D NIES3974_09670 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D NIES3974_27940 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D NIES3974_32570 putative ABC transporter permease protein K25155 evrB; viologen exporter family transport system permease protein
D NIES3974_32580 sulfate-transporting ATPase K25156 evrA; viologen exporter family transport system ATP-binding protein
D NIES3974_38610 ABC transporter-like protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D NIES3974_43560 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D NIES3974_25150 ABC transporter-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NIES3974_30960 ABC transporter-related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NIES3974_37440 ABC transporter-related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NIES3974_43570 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NIES3974_31140 heterocyst specific ABC-transporter, membrane spanning subunit DevC homolog K02004 ABC.CD.P; putative ABC transport system permease protein
D NIES3974_34560 ABC-transporter membrane spanning subunit DevC homolog K02004 ABC.CD.P; putative ABC transport system permease protein
D NIES3974_35660 DevC protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NIES3974_03930 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NIES3974_06630 DevC protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NIES3974_27910 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NIES3974_06640 ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NIES3974_37630 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D NIES3974_23710 hypothetical protein K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D NIES3974_46600 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D NIES3974_02890 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D NIES3974_30730 major facilitator superfamily MFS_1 K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D NIES3974_30710 hypothetical protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D NIES3974_21270 major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NIES3974_25070 major facilitator superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NIES3974_24110 phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D NIES3974_28630 transmembrane water channel K06188 aqpZ; aquaporin Z
D NIES3974_39010 ion transport protein K10716 kch; voltage-gated potassium channel
D NIES3974_40050 TrkA-N domain-containing protein K10716 kch; voltage-gated potassium channel
D NIES3974_14150 ammonium transporter K03320 amt; ammonium transporter, Amt family
D NIES3974_22230 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_23430 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_38010 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_47930 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_11830 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NIES3974_04310 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D NIES3974_31750 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D NIES3974_00110 MscS mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D NIES3974_03210 small mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D NIES3974_16010 magnesium transporter K06213 mgtE; magnesium transporter
D NIES3974_28210 putative Mg2+ transport protein K06213 mgtE; magnesium transporter
D NIES3974_07410 mgtE-1_1; magnesium transporter K06213 mgtE; magnesium transporter
D NIES3974_16580 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D NIES3974_25010 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D NIES3974_37290 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D NIES3974_25000 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D NIES3974_37300 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D NIES3974_47830 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D NIES3974_30060 CrcB protein K06199 crcB; fluoride exporter
D NIES3974_30070 CrcB protein K06199 crcB; fluoride exporter
D NIES3974_23240 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NIES3974_25500 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NIES3974_30400 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NIES3974_05120 outer membrane autotransporter barrel domain protein K12686 apeE; outer membrane lipase/esterase
D NIES3974_42020 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D NIES3974_42190 heme transport protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NIES3974_05660 outer membrane heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NIES3974_22890 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NIES3974_16090 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NIES3974_30950 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NIES3974_17020 surface antigen D15 domain-containing protein K07277 SAM50; outer membrane protein insertion porin family
D NIES3974_01370 surface antigen D15 domain-containing protein K07277 SAM50; outer membrane protein insertion porin family
D NIES3974_22710 hypothetical protein K09800 tamB; translocation and assembly module TamB
D NIES3974_17520 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D NIES3974_00460 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D NIES3974_30380 calcium/cation antiporter K07300 chaA; Ca2+:H+ antiporter
D NIES3974_26140 CaCA family Na(+)/Ca(+) antiporter K07301 yrbG; cation:H+ antiporter
D NIES3974_14120 gltS; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D NIES3974_10890 Na+/H+ antiporter K03316 nhaP; Na+:H+ antiporter
D NIES3974_32220 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D NIES3974_02780 putative potassium efflux transporter K26735 KEA4_5_6; K+:H+ antiporter
D NIES3974_42910 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D NIES3974_47350 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D NIES3974_45800 putative Na+-transporting ATP synthase K03498 trkH; trk/ktr system potassium uptake protein
D NIES3974_45810 TrkA domain-containing protein K03499 trkA; trk/ktr system potassium uptake protein
D NIES3974_31090 aromatic amino acid permease K03834 tyrP; tyrosine-specific transport protein
D NIES3974_22590 putative chloride channel protein K03281 clcA; chloride channel protein, CIC family
D NIES3974_03620 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D NIES3974_02150 chromate transporter K07240 chrA; chromate transporter
D NIES3974_41550 sulfate transporter/antisigma-factor antagonist STAS K03321 TC.SULP; sulfate permease, SulP family
D NIES3974_03690 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D NIES3974_11840 anion-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D NIES3974_41660 arsenite efflux transporter K03325 ACR3; arsenite transporter
D NIES3974_45050 arsenical-resistance protein K03325 ACR3; arsenite transporter
D NIES3974_27470 mnhB; putative Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D NIES3974_27530 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D NIES3974_27520 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D NIES3974_04750 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D NIES3974_27510 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D NIES3974_27500 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D NIES3974_27490 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D NIES3974_35580 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D NIES3974_38440 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D NIES3974_25410 cell cycle protein K03588 ftsW; cell division protein FtsW
D NIES3974_05800 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D NIES3974_13230 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D NIES3974_07810 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D NIES3974_25420 ccdA; putative c-type cytochrome biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D NIES3974_34830 secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system
D NIES3974_05690 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D NIES3974_20520 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_41440 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_41730 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_01870 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_15710 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_34620 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_35460 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_43060 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_43150 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_43330 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_45100 lipopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_02170 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_05000 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_12320 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D NIES3974_23180 FeoA family protein K04758 feoA; ferrous iron transport protein A
D NIES3974_23190 iron(II) transporter K04759 feoB; ferrous iron transport protein B
D NIES3974_28480 TspO and MBR related proteins K05770 TSPO; translocator protein
D NIES3974_41210 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D NIES3974_18510 inorganic carbon transporter K18814 ictB; putative inorganic carbon (hco3(-)) transporter
C 02044 Secretion system [BR:cals02044]
D NIES3974_20490 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_25630 hetC; heterocyst differentiation protein HetC K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41420 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_41720 cyclic nucleotide-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_01860 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NIES3974_20520 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_41440 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_41730 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_01870 HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D NIES3974_26530 peptidase A24A domain-containing protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NIES3974_07880 general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D NIES3974_29790 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D NIES3974_29810 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D NIES3974_34480 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D NIES3974_34490 response regulator receiver, CheY K02658 pilH; twitching motility two-component system response regulator PilH
D NIES3974_34510 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D NIES3974_03400 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D NIES3974_03410 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D NIES3974_03420 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D NIES3974_03430 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D NIES3974_29800 twitching motility protein K02669 pilT; twitching motility protein PilT
D NIES3974_38670 Pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D NIES3974_06010 twitching motility protein K02669 pilT; twitching motility protein PilT
D NIES3974_00780 hypothetical protein K02221 yggT; YggT family protein
D NIES3974_11890 hypothetical protein K02221 yggT; YggT family protein
D NIES3974_09740 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D NIES3974_05120 outer membrane autotransporter barrel domain protein K12686 apeE; outer membrane lipase/esterase
D NIES3974_00140 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NIES3974_16910 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D NIES3974_03310 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NIES3974_16900 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D NIES3974_16210 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NIES3974_06300 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NIES3974_13470 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NIES3974_10070 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NIES3974_19630 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NIES3974_15580 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D NIES3974_40780 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D NIES3974_24930 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cals02042]
D NIES3974_23240 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NIES3974_25500 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NIES3974_30400 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cals02022]
D NIES3974_26450 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NIES3974_26460 two-component response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NIES3974_18020 kdpD; potassium-dependent ATPase subunit D sensor protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D NIES3974_38240 integral membrane sensor signal transduction histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D NIES3974_12270 two component transcriptional regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D NIES3974_27890 multi-sensor signal transduction histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D NIES3974_23570 two component transcriptional regulator K11332 nblR; two-component system, OmpR family, response regulator NblR
D NIES3974_40790 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D NIES3974_39060 two component transcriptional regulator, winged helix family protein K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D NIES3974_12160 two component transcriptional regulator, winged helix family protein K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D NIES3974_42590 two component transcriptional regulator, winged helix family protein K02483 K02483; two-component system, OmpR family, response regulator
D NIES3974_18070 integral membrane sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D NIES3974_10740 two-component sensor histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D NIES3974_34480 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D NIES3974_34490 response regulator receiver, CheY K02658 pilH; twitching motility two-component system response regulator PilH
D NIES3974_15290 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_15670 two-component hybrid sensor and regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_40150 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_15330 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_15640 response regulator receiver protein PatA K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_23770 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_33760 response regulator receiver protein PatA K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_40080 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_42730 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_15320 two-component system, regulatory protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_15650 two-component system, regulatory protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_40090 response regulator receiver, CheY K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_42740 response regulator receiver protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_13590 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D NIES3974_13580 two-component system, regulatory protein K11355 rcp1; two-component system, chemotaxis family, response regulator Rcp1
D NIES3974_26050 GAF sensor signal transduction histidine kinase K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D NIES3974_06860 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cals02035]
D NIES3974_34500 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D NIES3974_10740 two-component sensor histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D NIES3974_34480 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D NIES3974_34490 response regulator receiver, CheY K02658 pilH; twitching motility two-component system response regulator PilH
D NIES3974_34510 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D NIES3974_29800 twitching motility protein K02669 pilT; twitching motility protein PilT
D NIES3974_38670 Pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D NIES3974_06010 twitching motility protein K02669 pilT; twitching motility protein PilT
D NIES3974_15330 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_15640 response regulator receiver protein PatA K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_23770 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_33760 response regulator receiver protein PatA K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_40080 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_42730 response regulator receiver protein K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D NIES3974_15320 two-component system, regulatory protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_15650 two-component system, regulatory protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_40090 response regulator receiver, CheY K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_42740 response regulator receiver protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D NIES3974_15310 putative CheW protein K11524 pixI; positive phototaxis protein PixI
D NIES3974_40100 CheW protein K11524 pixI; positive phototaxis protein PixI
D NIES3974_15300 methyl-accepting chemotaxis sensory transducer with phytochrome sensor K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_15660 methyl accepting chemotaxis protein K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_39410 methyl-accepting chemotaxis protein K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_40110 methyl-accepting chemotaxis sensory transducer with phytochrome sensor K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D NIES3974_15290 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_15670 two-component hybrid sensor and regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_40150 CheA signal transduction histidine kinase K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D NIES3974_07880 general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA
D NIES3974_29790 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D NIES3974_29810 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D NIES3974_26530 peptidase A24A domain-containing protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NIES3974_03430 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D NIES3974_03420 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D NIES3974_03410 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D NIES3974_03400 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins [BR:cals03037]
D NIES3974_23710 hypothetical protein K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:cals04812]
D NIES3974_15070 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NIES3974_11510 hypothetical protein K18640 parM; plasmid segregation protein ParM
D NIES3974_30330 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NIES3974_36280 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D NIES3974_36270 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D NIES3974_36260 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D NIES3974_22770 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D NIES3974_46630 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D NIES3974_46920 chromosome partitioning protein, ParA family K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:cals04147]
D NIES3974_10200 ATPase domain-containing protein K04079 HSP90A; molecular chaperone HtpG
D NIES3974_28000 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NIES3974_14940 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NIES3974_38340 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NIES3974_15110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_07350 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NIES3974_42880 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D NIES3974_42460 band 7 protein K07192 FLOT; flotillin
D NIES3974_38150 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_45770 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NIES3974_29020 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_04000 dnaK_1; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_08350 dnaK_2; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NIES3974_46500 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NIES3974_35840 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NIES3974_34120 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NIES3974_10000 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NIES3974_38070 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NIES3974_02500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NIES3974_16350 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NIES3974_06310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NIES3974_19300 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NIES3974_36580 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NIES3974_44350 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NIES3974_00870 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NIES3974_02430 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6]
D NIES3974_14340 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NIES3974_29200 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NIES3974_14350 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NIES3974_39420 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NIES3974_47490 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D NIES3974_03190 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NIES3974_33540 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NIES3974_14400 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NIES3974_47060 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NIES3974_39900 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NIES3974_00880 zwf; glucose 6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NIES3974_20830 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cals02048]
D NIES3974_45840 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D NIES3974_10250 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D NIES3974_45830 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D NIES3974_10260 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D NIES3974_45940 DEAD/DEAH box helicase-like protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D NIES3974_45850 CRISPR-associated Cas4 family protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D NIES3974_20880 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D NIES3974_24150 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D NIES3974_45860 CRISPR-associated Cas family protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D NIES3974_45880 hypothetical protein K19120 csc1; CRISPR-associated protein Csc1
D NIES3974_45890 hypothetical protein K19121 csc2; CRISPR-associated protein Csc2
D NIES3974_45900 hypothetical protein K19122 csc3; CRISPR-associated protein Csc3
D NIES3974_30560 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
D NIES3974_20940 Csm1 family CRISPR-associated protein K07016 csm1; CRISPR-associated protein Csm1
D NIES3974_20930 Csm2 family CRISPR-associated protein K19138 csm2; CRISPR-associated protein Csm2
D NIES3974_20920 Csm3 family CRISPR-associated RAMP protein K09002 csm3; CRISPR-associated protein Csm3
D NIES3974_10290 crm2-2; Crm2 family CRISPR-associated protein K19076 cmr2; CRISPR-associated protein Cmr2
D NIES3974_10300 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D NIES3974_10310 Cmr4 family CRISPR-associated RAMP protein K09000 cmr4; CRISPR-associated protein Cmr4
D NIES3974_10330 Cmr6 family CRISPR-associated RAMP protein K19142 cmr6; CRISPR-associated protein Cmr6
D NIES3974_47170 hypothetical protein K19144 csx3; CRISPR-associated protein Csx3
D NIES3974_00330 dpnB; type-2 restriction enzyme DpnII K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D NIES3974_33040 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_33060 putative DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_00340 site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_08030 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NIES3974_17070 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_24060 type II DNA modification methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_09450 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NIES3974_31530 putative reverse transcriptase K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D NIES3974_34380 putative reverse transcriptase K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D NIES3974_34780 putative reverse transcriptase K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D NIES3974_34870 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D NIES3974_41460 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D NIES3974_25990 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D NIES3974_25980 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D NIES3974_30770 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D NIES3974_28280 putative death on curing protein K07341 doc; death on curing protein
D NIES3974_46770 PilT domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NIES3974_46780 virulence associated protein B K18829 mvpT; antitoxin VapB
D NIES3974_30330 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NIES3974_15070 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NIES3974_37390 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NIES3974_26570 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_28230 aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_31930 nifS; nitrogenase cofactor synthesis protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NIES3974_29100 hypothetical protein K19170 dndC; DNA sulfur modification protein DndC
D NIES3974_29090 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
D NIES3974_33640 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
D NIES3974_45540 hypothetical protein K19172 dndE; DNA sulfur modification protein DndE
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cals01504]
D NIES3974_32670 GCN5-related N-acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D NIES3974_32610 knt_2; Kanamycin nucleotidyltransferase K17882 aadD; kanamycin nucleotidyltransferase [EC:2.7.7.-]
D NIES3974_10480 acetyltransferase family protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D NIES3974_24260 peptidoglycan glycosyltransferase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_10500 peptidoglycan glycosyltransferase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_13500 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NIES3974_28430 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NIES3974_45630 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cals00537]
D NIES3974_03190 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NIES3974_06440 glucose dehydrogenase-B K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D NIES3974_39180 hypothetical protein K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D NIES3974_30740 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D NIES3974_28360 NADP oxidoreductase coenzyme f420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D NIES3974_28370 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D NIES3974_13120 hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5]
D NIES3974_28380 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NIES3974_35430 putative zinc-binding oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NIES3974_09460 alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NIES3974_22630 FMN-dependent NADH-azoreductase 2 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D NIES3974_01740 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D NIES3974_30450 putative methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D NIES3974_43940 glutathione S-transferase-like protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D NIES3974_47590 ferredoxin thioredoxin reductase, beta chain K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]
D NIES3974_16510 manganese containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D NIES3974_24120 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NIES3974_41650 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NIES3974_47790 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NIES3974_03860 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NIES3974_33460 redoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NIES3974_37020 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NIES3974_30210 nickel-dependent hydrogenase large subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D NIES3974_30200 NADH ubiquinone oxidoreductase 20 kDa subunit K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D NIES3974_05390 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D NIES3974_11010 Retinal pigment epithelial membrane protein K00464 diox1; all-trans-8'-apo-beta-carotenal 15,15'-oxygenase [EC:1.13.11.75]
D NIES3974_07260 stearoyl-CoA 9-desaturase K23036 desC2; sn-2 palmitoyl-lipid 9-desaturase [EC:1.14.19.27]
D NIES3974_19210 stearoyl-CoA 9-desaturase K23054 desC; sn-1 stearoyl-lipid 9-desaturase [EC:1.14.19.28]
D NIES3974_45040 arsenate reductase, glutathione/glutaredoxin type K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D NIES3974_28010 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D NIES3974_05400 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D NIES3974_06980 putative methyltransferase K21457 mppJ; phenylpyruvate C(3)-methyltransferase [EC:2.1.1.281]
D NIES3974_06830 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D NIES3974_11380 GCN5-related N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D NIES3974_06520 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D NIES3974_05250 HAD-superfamily hydrolase subfamily IA, variant 3 K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D NIES3974_35230 group 1 glycosyl transferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D NIES3974_08860 putative phosphoribosylaminoimidazole carboxylase catalytic subunit K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D NIES3974_03760 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NIES3974_04800 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D NIES3974_41630 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D NIES3974_08780 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D NIES3974_07740 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NIES3974_27550 HAD superfamily hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D NIES3974_33810 HAD-superfamily hydrolase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D NIES3974_15380 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D NIES3974_14530 hypothetical protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D NIES3974_23390 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D NIES3974_16760 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NIES3974_32030 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D NIES3974_45200 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D NIES3974_13160 hypothetical protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-]
D NIES3974_39700 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NIES3974_11670 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NIES3974_16520 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D NIES3974_34040 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D NIES3974_18000 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D NIES3974_34420 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D NIES3974_29570 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NIES3974_11080 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D NIES3974_39170 hypothetical protein K14331 K14331; fatty aldehyde decarbonylase [EC:4.1.99.5]
D NIES3974_20780 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D NIES3974_03010 3-dehydroquinate synthase K21342 nos2; demethyl-4-deoxygadusol synthase [EC:4.2.3.154]
D NIES3974_35720 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D NIES3974_00290 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D NIES3974_20080 peptidyl-prolyl cis-trans isomerase cyclophilin type peptidyl-prolyl cis-trans isomerase K27682 CYP38; peptidylprolyl isomerase (cyclophilin 38) [EC:5.2.1.8]
D NIES3974_24400 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D NIES3974_45600 hypothetical protein K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
D NIES3974_25890 Cd/Co/Hg/Pb/Zn-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D NIES3974_39670 Cd/Co/Hg/Pb/Zn-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D NIES3974_09790 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D NIES3974_30030 ATPase, E1-E2 type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D NIES3974_32820 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D NIES3974_42010 ziaA; zinc-transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D NIES3974_07390 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D NIES3974_17540 HAD superfamily ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D NIES3974_34330 sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D NIES3974_12990 microcompartment protein K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK
D NIES3974_13000 microcompartment protein K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK
D NIES3974_13010 ethanolamine utilization protein EutN/carboxysome structural protein Ccml K08697 ccmL; carbon dioxide concentrating mechanism protein CcmL
D NIES3974_13020 ribulose bisphosphate carboxylase small chain K08698 ccmM; carbon dioxide concentrating mechanism protein CcmM
D NIES3974_13030 transferase hexapeptide repeat protein K08699 ccmN; carbon dioxide concentrating mechanism protein CcmN
D NIES3974_13040 microcompartment protein K08700 ccmO; carbon dioxide concentrating mechanism protein CcmO
C 99982 Energy metabolism
D NIES3974_21580 hypothetical protein K05337 fer; ferredoxin
D NIES3974_31940 Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein
D NIES3974_35300 hypothetical protein K14518 pipX; PII interaction protein X
D NIES3974_32350 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D NIES3974_45380 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT
D NIES3974_45370 NifZ protein K02597 nifZ; nitrogen fixation protein NifZ
D NIES3974_31910 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D NIES3974_32370 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D NIES3974_32380 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D NIES3974_22910 flavodoxin K03839 fldA; flavodoxin I
D NIES3974_07200 flavodoxin K03839 fldA; flavodoxin I
D NIES3974_32320 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D NIES3974_23010 class V aminotransferase K11325 K11325; L-cysteine/cystine lyase
D NIES3974_35310 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D NIES3974_27980 O-antigen polymerase K16567 exoQ; exopolysaccharide production protein ExoQ
D NIES3974_43320 O-antigen polymerase K16567 exoQ; exopolysaccharide production protein ExoQ
D NIES3974_45150 O-antigen polymerase K16567 exoQ; exopolysaccharide production protein ExoQ
D NIES3974_00280 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D NIES3974_01810 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
C 99988 Secondary metabolism
C 99999 Others
D NIES3974_20170 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D NIES3974_05430 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NIES3974_35810 RNA-binding S1 domain-containing protein K06959 tex; protein Tex
D NIES3974_12520 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
C 99975 Protein processing
D NIES3974_34230 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D NIES3974_44460 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D NIES3974_48570 tig; trigger factor K03545 tig; trigger factor
D NIES3974_18520 SsrA-binding protein K03664 smpB; SsrA-binding protein
D NIES3974_39260 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D NIES3974_39270 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D NIES3974_39280 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D NIES3974_39250 hypF; hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D NIES3974_17200 comM; competence protein ComM K07391 comM; magnesium chelatase family protein
D NIES3974_25430 ycf44; c-type cytochrome biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D NIES3974_31620 putative methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D NIES3974_36610 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D NIES3974_33270 hypothetical protein K07460 yraN; putative endonuclease
D NIES3974_11270 DNA processing protein K04096 smf; DNA processing protein
D NIES3974_28220 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D NIES3974_32520 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D NIES3974_36330 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D NIES3974_40750 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D NIES3974_41010 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D NIES3974_18940 transposase K07492 K07492; putative transposase
D NIES3974_28900 transposase K07492 K07492; putative transposase
D NIES3974_27810 IS891/IS1136/IS1341 transposase K07496 K07496; putative transposase
D NIES3974_28520 IS891/IS1136/IS1341 transposase K07496 K07496; putative transposase
D NIES3974_31720 transposase K07496 K07496; putative transposase
D NIES3974_32510 transposase K07496 K07496; putative transposase
D NIES3974_32720 transposase K07496 K07496; putative transposase
D NIES3974_34860 transposase K07496 K07496; putative transposase
D NIES3974_36320 transposase K07496 K07496; putative transposase
D NIES3974_38920 IS891/IS1136/IS1341 transposase K07496 K07496; putative transposase
D NIES3974_39080 transposase K07496 K07496; putative transposase
D NIES3974_40740 transposase K07496 K07496; putative transposase
D NIES3974_41000 transposase K07496 K07496; putative transposase
D NIES3974_43680 transposase, IS605 OrfB family protein K07496 K07496; putative transposase
D NIES3974_45650 IS891/IS1136/IS1341 transposase K07496 K07496; putative transposase
D NIES3974_46860 IS891/IS1136/IS1341 transposase K07496 K07496; putative transposase
D NIES3974_05990 IS891/IS1136/IS1341 transposase K07496 K07496; putative transposase
D NIES3974_09610 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D NIES3974_37310 hypothetical protein K03969 pspA; phage shock protein A
D NIES3974_00960 hypothetical protein K03969 pspA; phage shock protein A
D NIES3974_00970 phage shock protein A, PspA K03969 pspA; phage shock protein A
D NIES3974_34850 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NIES3974_12860 putative sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D NIES3974_24470 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NIES3974_20380 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D NIES3974_22180 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D NIES3974_46530 Na+/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NIES3974_12760 putative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D NIES3974_12770 putative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D NIES3974_43760 Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D NIES3974_27480 putative multicomponent Na+:H+ antiporter subunit B K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
C 99978 Cell growth
D NIES3974_02320 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D NIES3974_19640 hypothetical protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D NIES3974_36290 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D NIES3974_31700 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D NIES3974_38660 KaiB domain-containing protein K08481 kaiB; circadian clock protein KaiB
D NIES3974_42290 circadian clock protein KaiB K08481 kaiB; circadian clock protein KaiB
D NIES3974_42300 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D NIES3974_21200 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D NIES3974_18190 HlyD family secretion protein K02022 ABC.MR.TX; HlyD family secretion protein
D NIES3974_19070 HlyD family secretion protein K02022 ABC.MR.TX; HlyD family secretion protein
D NIES3974_31150 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D NIES3974_41890 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D NIES3974_06610 heterocyst specific ABC-transporter, membrane fusion protein DevB K02005 ABC.CD.TX; HlyD family secretion protein
D NIES3974_07550 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D NIES3974_26420 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D NIES3974_46010 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D NIES3974_17420 metallothionein K21904 smtA; metallothionein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NIES3974_17390 ChaB family protein K06197 chaB; cation transport regulator
D NIES3974_30640 export-related chaperone CsaA K06878 K06878; tRNA-binding protein
D NIES3974_31280 globin K06886 glbN; hemoglobin
D NIES3974_27640 hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D NIES3974_37640 putative ABC transporter membrane protein K09014 sufB; Fe-S cluster assembly protein SufB
D NIES3974_37620 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D NIES3974_16020 putative ribonuclease BN K07058 K07058; membrane protein
D NIES3974_04220 ribonuclease BN K07058 K07058; membrane protein
D NIES3974_38360 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D NIES3974_22280 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D NIES3974_10820 rhodanese-like protein K07146 K07146; UPF0176 protein
D NIES3974_40530 HAD family hydrolase K11777 K11777; HAD superfamily phosphatase
D NIES3974_43830 photosystem II PsbN protein K02715 psbN; PsbN protein
D NIES3974_18550 hypothetical protein K00389 yidH; putative membrane protein
D NIES3974_24990 hypothetical protein K08972 K08972; putative membrane protein
D NIES3974_45410 hypothetical protein K08972 K08972; putative membrane protein
D NIES3974_47130 hypothetical protein K08972 K08972; putative membrane protein
D NIES3974_47140 hypothetical protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D NIES3974_21180 hypothetical protein K06867 K06867; uncharacterized protein
D NIES3974_13450 hypothetical protein K06867 K06867; uncharacterized protein
D NIES3974_15610 hypothetical protein K06872 K06872; uncharacterized protein
D NIES3974_02690 DRTGG domain-containing protein K06873 K06873; uncharacterized protein
D NIES3974_35400 hypothetical protein K06883 K06883; uncharacterized protein
D NIES3974_35830 small GTP-binding protein domain-containing protein K06883 K06883; uncharacterized protein
D NIES3974_03170 small GTP-binding protein K06883 K06883; uncharacterized protein
D NIES3974_40920 hypothetical protein K06888 K06888; uncharacterized protein
D NIES3974_25540 hypothetical protein K06893 K06893; uncharacterized protein
D NIES3974_04560 hypothetical protein K06903 W; Bacteriophage baseplate protein W
D NIES3974_04630 hypothetical protein K06907 FI; Bacteriophage tail sheath protein
D NIES3974_11190 hypothetical protein K06923 K06923; uncharacterized protein
D NIES3974_15870 hypothetical protein K06926 K06926; uncharacterized protein
D NIES3974_32890 hypothetical protein K06940 K06940; uncharacterized protein
D NIES3974_39330 hypothetical protein K06945 K06945; uncharacterized protein
D NIES3974_14040 GTP-binding protein HSR1-related protein K06946 K06946; uncharacterized protein
D NIES3974_19880 hypothetical protein K06960 K06960; uncharacterized protein
D NIES3974_08820 hypothetical protein K06962 K06962; uncharacterized protein
D NIES3974_20050 photosystem I assembly BtpA K06971 K06971; uncharacterized protein
D NIES3974_00720 GCN5-related N-acetyltransferase K06976 K06976; uncharacterized protein
D NIES3974_20000 peptidase S15 K06978 K06978; uncharacterized protein
D NIES3974_10800 glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D NIES3974_18730 hypothetical protein K06995 K06995; uncharacterized protein
D NIES3974_33200 hypothetical protein K07000 K07000; uncharacterized protein
D NIES3974_09950 hypothetical protein K07028 K07028; uncharacterized protein
D NIES3974_18630 hypothetical protein K07065 K07065; uncharacterized protein
D NIES3974_29420 hypothetical protein K07065 K07065; uncharacterized protein
D NIES3974_00930 hypothetical protein K07066 K07066; uncharacterized protein
D NIES3974_03870 hypothetical protein K07066 K07066; uncharacterized protein
D NIES3974_43580 hypothetical protein K07071 K07071; uncharacterized protein
D NIES3974_37250 hypothetical protein K07074 K07074; uncharacterized protein
D NIES3974_10220 DNA polymerase beta domain protein K07075 K07075; uncharacterized protein
D NIES3974_44290 aldo/keto reductase K07079 K07079; uncharacterized protein
D NIES3974_03840 oxidoreductase, aldo/keto reductase family protein K07079 K07079; uncharacterized protein
D NIES3974_36350 putative Na+-dependent bicarbonate transporter K07086 K07086; uncharacterized protein
D NIES3974_48620 permease K07089 K07089; uncharacterized protein
D NIES3974_21140 hypothetical protein K07090 K07090; uncharacterized protein
D NIES3974_01310 hypothetical protein K07090 K07090; uncharacterized protein
D NIES3974_44640 hypothetical protein K07093 K07093; uncharacterized protein
D NIES3974_26410 hypothetical protein K07093 K07093; uncharacterized protein
D NIES3974_18220 putative Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D NIES3974_44620 metallophosphoesterase K07098 K07098; uncharacterized protein
D NIES3974_12870 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D NIES3974_42430 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D NIES3974_39320 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D NIES3974_12040 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D NIES3974_04790 hypothetical protein K08998 K08998; uncharacterized protein
D NIES3974_03830 hypothetical protein K08999 K08999; uncharacterized protein
D NIES3974_23580 hypothetical protein K09005 K09005; uncharacterized protein
D NIES3974_47680 hypothetical protein K09118 K09118; uncharacterized protein
D NIES3974_11820 hypothetical protein K09131 K09131; uncharacterized protein
D NIES3974_28500 hypothetical protein K09138 K09138; uncharacterized protein
D NIES3974_32010 hypothetical protein K09705 K09705; uncharacterized protein
D NIES3974_21170 hypothetical protein K09744 K09744; uncharacterized protein
D NIES3974_47580 hypothetical protein K09763 K09763; uncharacterized protein
D NIES3974_15570 acid phosphatase/vanadium-dependent haloperoxidase-related protein K09775 K09775; uncharacterized protein
D NIES3974_24650 YCII-like protein K09780 K09780; uncharacterized protein
D NIES3974_19130 ferric reductase domain-containing protein K09792 K09792; uncharacterized protein
D NIES3974_12200 hypothetical protein K09793 K09793; uncharacterized protein
D NIES3974_20160 hypothetical protein K09797 K09797; uncharacterized protein
D NIES3974_47360 hypothetical protein K09807 K09807; uncharacterized protein
D NIES3974_22490 hypothetical protein K09919 K09919; uncharacterized protein
D NIES3974_10120 hypothetical protein K09931 K09931; uncharacterized protein
D NIES3974_21030 hypothetical protein K09940 K09940; uncharacterized protein
D NIES3974_41350 hypothetical protein K09940 K09940; uncharacterized protein
D NIES3974_07830 hypothetical protein K09940 K09940; uncharacterized protein
D NIES3974_06920 Rho termination factor-like protein K09942 K09942; uncharacterized protein
D NIES3974_18910 hypothetical protein K09962 K09962; uncharacterized protein
D NIES3974_06780 hypothetical protein K09966 K09966; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024