+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Cicer arietinum (chickpea)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        101489580 DNA-directed RNA polymerase II subunit 1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        101504170 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        101498093 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        101506043 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        101510645 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        101499719 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        101504109 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        101510430 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        101511180 DNA-directed RNA polymerase II subunit RPB7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        101489651 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        101489991 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        101500708 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101503264 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101505518 DNA-directed RNA polymerase V subunit 5C-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101509909 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101512942 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101503471 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101499845 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101494253 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        101512443 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101490143 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101494979 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101490471 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101494736 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        101506487 DNA-directed RNA polymerase IV subunit 1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        101488249 DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        101513394 DNA-directed RNA polymerases IV and V subunit 2-like	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        101491439 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        101500579 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        101503374 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        101506088 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        101499660 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        101495188 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        101507215 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101503306 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101504986 transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        101506465 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        101503862 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        101508419 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        101511892 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        101502025 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        101504336 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        101512955 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        101497943 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        101499258 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        101510271 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        101507726 uncharacterized LOC101507726	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        101492087 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        101491706 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        101514215 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        101500198 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        101513367 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        101505282 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        101506132 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        101507070 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        101507007 transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        101500813 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        101492244 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        101495008 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        101514922 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        101509283 probable RNA polymerase II transcription factor B subunit 1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        101499964 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        101493530 general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        101502894 general transcription factor IIH subunit 4	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        101491998 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        101515105 DNA repair helicase UVH6	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        101491331 general transcription factor IIH subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        101507280 general transcription factor IIH subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        101510875 cyclin-dependent kinase D-3-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        101497666 CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        101514348 cyclin-H1-1	K06634 CCNH; cyclin H 
E        101507540 cyclin-H1-1-like	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        101493904 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        101503401 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        101488234 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        101491075 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        101507749 mediator of RNA polymerase II transcription subunit 20a-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        101499624 mediator of RNA polymerase II transcription subunit 22a	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        101509964 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        101507536 mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        101514628 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        101510824 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        101493507 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        101496753 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        101502433 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        101503087 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        101508330 cyclin-C1-2-like	K15161 CCNC; cyclin-C 
E        101505892 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        101491240 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        101507045 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        101495317 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        101497203 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        101506836 mediator of RNA polymerase II transcription subunit 33B-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        101514384 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        101511945 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        101502210 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        101501138 TRRAP; transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        101514613 transcriptional adapter ADA2b	K11314 TADA2A; transcriptional adapter 2-alpha 
E        101501610 transcriptional adapter ADA2	K11314 TADA2A; transcriptional adapter 2-alpha 
E        101506465 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        101503862 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        101508419 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        101511892 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        101502025 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        101504336 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        101512955 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        101492087 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        101491706 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        101514215 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        101513367 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        101505282 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        101506862 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        101500633 uncharacterized LOC101500633	K11364 SGF29; SAGA-associated factor 29 
E        101510984 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        101502529 transcription and mRNA export factor SUS1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        101502019 ubiquitin carboxyl-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        101489555 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        101497519 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        101490576 pre-mRNA-splicing factor prp12	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        101503799 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        101505711 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        101499593 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        101508771 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        101495916 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        101488648 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        101504002 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        101515098 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        101495994 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        101505762 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
E        101509032 actin-related protein 4-like	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        101505711 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        101491466 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        101496003 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        101507145 uncharacterized LOC101507145	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        101504824 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        101489315 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        101515779 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        101513665 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        101490397 transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
E        101499554 SUPT6H; transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        101509997 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        101498250 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        101512932 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        101507429 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        101505369 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        101514517 GATA zinc finger domain-containing protein 14	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        101496537 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101512143 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101493789 serine/threonine-protein phosphatase PP1 isozyme 1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101511217 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101493399 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101512962 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101489508 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101491573 uncharacterized LOC101491573	K06100 SYMPK; symplekin 
E        101506340 symplekin	K06100 SYMPK; symplekin 
E        101495743 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        101510269 5'-3' exoribonuclease 3	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        101492611 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        101515382 regulation of nuclear pre-mRNA domain-containing protein 1A-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        101511952 UPF0400 protein C337.03-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        101489584 regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        101502985 regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        101504749 uncharacterized ATP-dependent helicase C29A10.10c-like	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        101491085 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        101488479 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        101493477 hsp90 co-chaperone CDC37	K15175 CDC73; parafibromin 
E        101491640 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        101508547 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        101496640 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        101507370 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        101496126 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        101488441 ell-associated factor Eaf	K15186 EAF; ELL-associated factor 
E        101491717 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        101499259 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        101507367 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        101509753 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        101491717 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        101499259 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        101507367 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        101509753 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        101503755 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        101488792 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        101512171 la-related protein 6B	K15191 LARP7; La-related protein 7 
E        101490312 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        101491717 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        101499259 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        101507367 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        101509753 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        101509536 BTAF1; TATA-binding protein-associated factor BTAF1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        101507640 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        101512449 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        101492987 dr1-associated corepressor homolog	K21752 DRAP1; Dr1-associated corepressor 
E        101513228 dr1-associated corepressor homolog	K21752 DRAP1; Dr1-associated corepressor 
E        101503359 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        101499089 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        101507570 RNA polymerase II C-terminal domain phosphatase-like 2	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        101512153 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        101512019 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        101489120 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        101489891 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        101500545 CTD nuclear envelope phosphatase 1 homolog	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        101507994 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        101497906 uncharacterized LOC101497906	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        101495777 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        101507271 RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        101500120 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        101491476 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        101491553 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        101489187 GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        101491903 DNA-directed RNA polymerase III subunit rpc1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        101496156 DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        101509663 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        101507815 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        101508940 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        101502923 uncharacterized LOC101502923	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        101494997 uncharacterized LOC101494997	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        101505757 uncharacterized LOC101505757	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        101513907 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        101493382 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        101512478 DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        101495880 DNA-directed RNA polymerase III subunit RPC7	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        101506945 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        101505320 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        101499600 DNA-directed RNA polymerase III subunit rpc9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        101488728 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        101496629 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        101500708 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101503264 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101505518 DNA-directed RNA polymerase V subunit 5C-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101509909 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101512942 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101503471 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101499845 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101494253 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        101512443 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101490143 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101494979 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101490471 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101494736 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        101512638 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        101507215 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101503306 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101490442 transcription factor IIIB 60 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        101500084 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        101506123 transcription factor IIIB 70 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        101488997 transcription factor TFIIIB component B''	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        101494281 uncharacterized LOC101494281	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        101510901 uncharacterized LOC101510901	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        101512220 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        101503873 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        101493406 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        101509775 general transcription factor 3C polypeptide 6	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        101493406 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        101512220 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        101503873 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        101498786 uncharacterized LOC101498786	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        101495059 snRNA-activating protein complex subunit	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        101497188 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        101514434 DNA-directed RNA polymerase I subunit rpa1-like	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        101488843 DNA-directed RNA polymerase I subunit rpa1-like	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        101496788 DNA-directed RNA polymerase I subunit RPA2-like	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        101509663 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        101507815 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        101508940 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        101507754 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        101500974 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        101496606 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        101500708 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101503264 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101505518 DNA-directed RNA polymerase V subunit 5C-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101509909 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101512942 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101503471 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101499845 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        101494253 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        101512443 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101490143 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101494979 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101490471 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101494736 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        101507215 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101503306 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        101503867 high mobility group B protein 6-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        101490748 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        101505294 upstream activation factor subunit spp27	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        101489315 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        101515779 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        101513665 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        101504208 putative chromatin-remodeling complex ATPase chain	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        101494088 putative chromatin-remodeling complex ATPase chain	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        6797532 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        6797471 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        6797499 rpoC1; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        6797566 rpoC2; RNA polymerase beta'' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        101498946 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        101498179 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        101498611 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
E        101499497 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        101506088 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        101499660 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        101495188 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        101507007 transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
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#Last updated: April 9, 2024