+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium aquatimens
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:caqm00010]
D CAQUA_03825 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CAQUA_08225 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CAQUA_06675 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CAQUA_07660 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CAQUA_10105 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CAQUA_05455 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CAQUA_05445 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_07910 gapA; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_05450 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CAQUA_01265 gpmA1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CAQUA_03425 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CAQUA_04180 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CAQUA_03495 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CAQUA_03740 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_09825 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CAQUA_01390 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_04960 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CAQUA_10600 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:caqm00020]
D CAQUA_08505 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CAQUA_05640 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CAQUA_09415 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CAQUA_07260 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_01195 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CAQUA_01200 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CAQUA_01190 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CAQUA_07665 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CAQUA_04450 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CAQUA_09350 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CAQUA_10600 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CAQUA_03495 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CAQUA_03740 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:caqm00030]
D CAQUA_08225 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CAQUA_05485 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CAQUA_05475 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CAQUA_05925 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CAQUA_05395 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CAQUA_05495 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CAQUA_05490 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CAQUA_02705 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CAQUA_03165 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_07785 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CAQUA_04140 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CAQUA_10105 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CAQUA_07660 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CAQUA_06675 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:caqm00040]
D CAQUA_10535 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CAQUA_08080 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CAQUA_05395 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CAQUA_03525 xylB; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:caqm00051]
D CAQUA_09880 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CAQUA_09155 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CAQUA_09160 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CAQUA_09180 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CAQUA_06675 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CAQUA_07660 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CAQUA_10105 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CAQUA_05455 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CAQUA_03735 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CAQUA_02705 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:caqm00052]
D CAQUA_01390 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CAQUA_01370 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CAQUA_03580 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CAQUA_01375 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CAQUA_01435 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CAQUA_04920 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CAQUA_08080 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_03825 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CAQUA_10715 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CAQUA_06675 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CAQUA_07310 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
D CAQUA_10535 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:caqm00500]
D CAQUA_07310 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CAQUA_08080 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CAQUA_09810 bglA; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CAQUA_07300 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CAQUA_06850 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CAQUA_04195 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CAQUA_03215 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CAQUA_03250 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CAQUA_06845 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CAQUA_07305 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CAQUA_04085 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D CAQUA_04060 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CAQUA_04040 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D CAQUA_02050 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CAQUA_02045 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_03825 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CAQUA_08225 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CAQUA_09880 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:caqm00520]
D CAQUA_09880 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CAQUA_09615 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CAQUA_09640 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CAQUA_07780 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CAQUA_02350 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CAQUA_01240 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CAQUA_03825 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CAQUA_04960 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_08080 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CAQUA_10535 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CAQUA_07900 galE3; UDP-glucose 4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D CAQUA_01370 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CAQUA_03580 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CAQUA_01375 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CAQUA_01435 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CAQUA_04920 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CAQUA_10715 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CAQUA_08225 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CAQUA_09155 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CAQUA_09160 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CAQUA_09180 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CAQUA_07300 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:caqm00620]
D CAQUA_03495 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CAQUA_03740 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_01640 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CAQUA_01635 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CAQUA_04180 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CAQUA_09320 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CAQUA_04250 yccX; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CAQUA_09825 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CAQUA_10165 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CAQUA_05190 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CAQUA_09350 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CAQUA_04450 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CAQUA_07665 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CAQUA_10600 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CAQUA_11030 glcB; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_00800 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:caqm00630]
D CAQUA_11035 aceA1; Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CAQUA_11030 glcB; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CAQUA_08505 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CAQUA_05640 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_09320 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CAQUA_09275 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CAQUA_09280 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CAQUA_00825 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CAQUA_03595 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_03665 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_07695 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CAQUA_03730 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CAQUA_03725 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_03720 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CAQUA_04210 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CAQUA_07260 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:caqm00640]
D CAQUA_01640 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CAQUA_01635 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_03695 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D CAQUA_11085 acuI1; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CAQUA_11160 acuI2; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CAQUA_09320 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CAQUA_09275 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CAQUA_09280 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CAQUA_09355 prpC2; 2-methylcitrate synthase 2 K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CAQUA_09365 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D CAQUA_09360 bcpA; Carboxyvinyl-carboxyphosphonate phosphorylmutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D CAQUA_09825 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:caqm00650]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_02845 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CAQUA_01195 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CAQUA_01200 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CAQUA_01190 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CAQUA_00425 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_06365 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_06630 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_08050 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_06625 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CAQUA_06730 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:caqm00660]
D CAQUA_06630 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_08050 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_06625 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CAQUA_06730 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CAQUA_06505 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CAQUA_06500 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CAQUA_06575 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:caqm00562]
D CAQUA_04150 impA; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CAQUA_05110 pgsA2; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D CAQUA_05455 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:caqm00190]
D CAQUA_05910 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CAQUA_01195 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CAQUA_01200 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CAQUA_01190 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CAQUA_03800 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CAQUA_03805 qcrB; Menaquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CAQUA_03795 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D CAQUA_05505 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CAQUA_03785 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CAQUA_03790 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CAQUA_02460 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CAQUA_03780 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CAQUA_05510 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CAQUA_02255 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CAQUA_02250 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CAQUA_06895 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CAQUA_06885 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CAQUA_06890 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CAQUA_06900 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CAQUA_06880 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CAQUA_06915 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CAQUA_06905 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CAQUA_06910 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CAQUA_01850 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CAQUA_01815 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CAQUA_07975 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:caqm00710]
D CAQUA_05450 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CAQUA_05445 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_07910 gapA; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_10105 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CAQUA_07660 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CAQUA_05495 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CAQUA_02705 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CAQUA_05455 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CAQUA_05395 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CAQUA_05490 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:caqm00720]
D CAQUA_09350 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CAQUA_07665 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CAQUA_01195 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CAQUA_01200 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CAQUA_01190 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_09415 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CAQUA_05640 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CAQUA_05785 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CAQUA_09440 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CAQUA_00300 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CAQUA_01635 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CAQUA_01640 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:caqm00680]
D CAQUA_07695 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CAQUA_03425 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CAQUA_03735 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CAQUA_10105 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CAQUA_07660 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CAQUA_06675 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CAQUA_01640 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CAQUA_01635 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CAQUA_01265 gpmA1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CAQUA_06590 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CAQUA_08510 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CAQUA_02465 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:caqm00910]
D CAQUA_04215 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CAQUA_03595 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_03665 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_01990 mtcA2; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:caqm00920]
D CAQUA_10465 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CAQUA_10470 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CAQUA_08370 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CAQUA_04525 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CAQUA_10475 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CAQUA_10485 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CAQUA_09315 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CAQUA_10135 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CAQUA_02335 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CAQUA_02340 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CAQUA_09430 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CAQUA_02685 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:caqm00061]
D CAQUA_09320 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CAQUA_03485 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein
D CAQUA_03685 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CAQUA_01245 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_02285 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03255 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03260 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:caqm00071]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_02945 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CAQUA_02845 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CAQUA_03695 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D CAQUA_02910 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02980 mmgC2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_07880 mmgC3; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_01245 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_02285 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03255 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03260 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:caqm00561]
D CAQUA_04210 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CAQUA_03735 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CAQUA_10725 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CAQUA_06065 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CAQUA_03830 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CAQUA_10655 fbpC3; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CAQUA_07900 galE3; UDP-glucose 4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:caqm00564]
D CAQUA_06490 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CAQUA_00310 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CAQUA_03830 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CAQUA_05465 glpQ1; Glycerophosphoryl diester phosphodiesterase precursor K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CAQUA_10800 glpQ2; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CAQUA_04395 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CAQUA_04655 pgsA1; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CAQUA_01695 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:caqm00600]
D CAQUA_07980 Neutral ceramidase K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:caqm00592]
D CAQUA_03695 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D CAQUA_02945 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:caqm01040]
D CAQUA_03695 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D CAQUA_05130 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:caqm00230]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_07785 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CAQUA_02160 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CAQUA_02085 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CAQUA_08170 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CAQUA_02145 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CAQUA_02135 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CAQUA_02140 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CAQUA_02165 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CAQUA_09240 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CAQUA_09235 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CAQUA_02100 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CAQUA_02090 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CAQUA_08165 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CAQUA_05170 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CAQUA_03945 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CAQUA_07225 rihA2; Pyrimidine-specific ribonucleoside hydrolase RihA K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D CAQUA_01875 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CAQUA_09540 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CAQUA_09545 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CAQUA_02995 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CAQUA_02520 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CAQUA_05585 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_05605 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_05630 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_09515 guaA3; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_05355 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CAQUA_02450 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CAQUA_02455 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CAQUA_03360 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CAQUA_05175 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CAQUA_01280 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CAQUA_03440 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CAQUA_01000 cyaB; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CAQUA_10080 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CAQUA_00440 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CAQUA_09765 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CAQUA_05105 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CAQUA_10465 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CAQUA_10470 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:caqm00240]
D CAQUA_05340 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CAQUA_05335 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CAQUA_05325 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CAQUA_05330 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CAQUA_05695 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CAQUA_10120 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CAQUA_05345 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CAQUA_04380 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CAQUA_02995 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CAQUA_09285 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CAQUA_06000 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CAQUA_05320 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CAQUA_10545 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CAQUA_02450 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CAQUA_02455 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CAQUA_09135 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CAQUA_04975 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CAQUA_08375 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CAQUA_04615 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:caqm00250]
D CAQUA_03995 ansB; L-asparaginase 2 precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CAQUA_03775 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CAQUA_10500 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CAQUA_05740 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CAQUA_06105 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CAQUA_06100 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CAQUA_10080 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CAQUA_02090 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CAQUA_05325 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CAQUA_00425 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_06365 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_04215 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CAQUA_03595 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_03665 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_05340 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CAQUA_05335 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CAQUA_02140 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CAQUA_09615 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CAQUA_02160 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:caqm00260]
D CAQUA_00810 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CAQUA_00815 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CAQUA_06965 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CAQUA_06960 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CAQUA_03605 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CAQUA_07695 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CAQUA_04210 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CAQUA_01265 gpmA1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CAQUA_06590 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CAQUA_08510 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CAQUA_02465 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CAQUA_03730 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CAQUA_03725 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_03720 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CAQUA_05210 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CAQUA_04035 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CAQUA_11230 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CAQUA_11225 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:caqm00270]
D CAQUA_02335 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CAQUA_02340 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CAQUA_03220 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CAQUA_00305 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CAQUA_05370 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CAQUA_03945 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CAQUA_07205 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CAQUA_09140 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CAQUA_00810 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CAQUA_00815 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CAQUA_06965 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CAQUA_09430 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CAQUA_02685 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CAQUA_09425 metZ; O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CAQUA_03755 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CAQUA_09315 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CAQUA_10135 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CAQUA_09825 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CAQUA_02815 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CAQUA_05210 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CAQUA_06590 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CAQUA_08510 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:caqm00280]
D CAQUA_03755 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_02945 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CAQUA_09320 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CAQUA_09275 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CAQUA_09280 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:caqm00290]
D CAQUA_04035 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CAQUA_06505 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CAQUA_06500 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CAQUA_06575 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CAQUA_06630 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_08050 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_06625 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CAQUA_06620 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CAQUA_06645 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CAQUA_03755 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CAQUA_10500 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CAQUA_00800 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:caqm00300]
D CAQUA_06965 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CAQUA_00810 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CAQUA_00815 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CAQUA_04620 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CAQUA_04610 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CAQUA_07365 dapD1; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CAQUA_07375 dapD2; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CAQUA_06120 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CAQUA_07360 dapE3; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CAQUA_04830 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CAQUA_06970 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CAQUA_03900 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CAQUA_03905 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:caqm00310]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_02910 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02980 mmgC2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_07880 mmgC3; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_00425 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_06365 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:caqm00220]
D CAQUA_06115 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CAQUA_06105 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CAQUA_06100 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CAQUA_02140 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CAQUA_03595 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_03665 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_05340 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CAQUA_05335 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CAQUA_04215 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CAQUA_10500 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CAQUA_01705 Acetyltransferase (GNAT) family protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D CAQUA_06125 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CAQUA_06135 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CAQUA_06120 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:caqm00330]
D CAQUA_01290 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CAQUA_03055 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CAQUA_03085 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:caqm00340]
D CAQUA_05735 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CAQUA_05730 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CAQUA_04160 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CAQUA_04145 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CAQUA_04125 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CAQUA_04155 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CAQUA_04110 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CAQUA_00640 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_04105 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_08700 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CAQUA_04100 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:caqm00350]
D CAQUA_00640 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_04105 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_00425 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_06365 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism
D CAQUA_00640 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_04105 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:caqm00380]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_02910 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02980 mmgC2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_07880 mmgC3; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_00825 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:caqm00400]
D CAQUA_03840 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CAQUA_05285 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CAQUA_05290 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CAQUA_05280 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CAQUA_09080 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CAQUA_05275 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CAQUA_11205 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CAQUA_11210 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CAQUA_11215 trpGD; Bifunctional protein TrpGD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CAQUA_04145 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CAQUA_04170 trpC1; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CAQUA_11220 trpC2; Tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CAQUA_11230 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CAQUA_11225 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CAQUA_08210 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CAQUA_00695 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CAQUA_10770 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CAQUA_00640 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_04105 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D CAQUA_03695 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:caqm00430]
D CAQUA_01635 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CAQUA_01640 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:caqm00450]
D CAQUA_02685 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CAQUA_03220 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CAQUA_00305 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CAQUA_05545 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CAQUA_11290 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CAQUA_10465 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CAQUA_10470 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CAQUA_08015 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:caqm00460]
D CAQUA_09810 bglA; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CAQUA_03995 ansB; L-asparaginase 2 precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CAQUA_07695 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:caqm00470]
D CAQUA_09605 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CAQUA_06485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CAQUA_02140 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CAQUA_02505 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CAQUA_03915 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CAQUA_04830 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CAQUA_06970 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:caqm00480]
D CAQUA_01725 ybdK1; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CAQUA_03750 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CAQUA_02695 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CAQUA_09415 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CAQUA_05925 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CAQUA_05485 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:caqm00515]
D CAQUA_08030 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:caqm00514]
D CAQUA_08030 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:caqm00542]
D CAQUA_06925 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:caqm00541]
D CAQUA_08080 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CAQUA_01435 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CAQUA_04920 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CAQUA_10715 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CAQUA_10535 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CAQUA_01125 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CAQUA_01145 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CAQUA_01135 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D CAQUA_09155 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CAQUA_09160 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CAQUA_07780 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:caqm00550]
D CAQUA_02350 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CAQUA_01240 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CAQUA_03930 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CAQUA_03915 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CAQUA_03900 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CAQUA_06485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CAQUA_03905 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CAQUA_03320 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CAQUA_05705 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CAQUA_03910 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CAQUA_03925 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CAQUA_03895 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CAQUA_00335 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CAQUA_09395 dacB2; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CAQUA_01855 dacB1; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CAQUA_00785 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CAQUA_00780 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:caqm00552]
D CAQUA_05705 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CAQUA_06925 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:caqm00543]
D CAQUA_06925 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CAQUA_02335 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:caqm00730]
D CAQUA_09875 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D CAQUA_06815 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CAQUA_05010 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CAQUA_00205 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CAQUA_00210 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CAQUA_06475 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CAQUA_09085 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CAQUA_09765 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CAQUA_00065 tenA; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:caqm00740]
D CAQUA_05410 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CAQUA_05400 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CAQUA_05415 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CAQUA_05405 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CAQUA_04550 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CAQUA_00205 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:caqm00750]
D CAQUA_03305 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CAQUA_08510 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CAQUA_03605 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CAQUA_05825 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:caqm00760]
D CAQUA_06665 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CAQUA_02475 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CAQUA_03095 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CAQUA_02425 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CAQUA_04660 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CAQUA_02550 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CAQUA_00460 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CAQUA_06050 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CAQUA_00425 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CAQUA_06365 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:caqm00770]
D CAQUA_06630 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_08050 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CAQUA_06625 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CAQUA_06620 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CAQUA_06645 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CAQUA_07700 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CAQUA_05365 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CAQUA_06450 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CAQUA_06290 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CAQUA_03755 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:caqm00780]
D CAQUA_03685 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CAQUA_04070 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CAQUA_09250 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:caqm00785]
D CAQUA_03715 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CAQUA_03710 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_03495 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CAQUA_03740 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CAQUA_07260 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CAQUA_03730 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CAQUA_03725 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CAQUA_03720 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:caqm00790]
D CAQUA_01885 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CAQUA_03000 pld1; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CAQUA_06375 pld2; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CAQUA_08725 phoD; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CAQUA_01895 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CAQUA_01900 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CAQUA_01890 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CAQUA_07350 folP2; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CAQUA_08380 folA2; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CAQUA_02825 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CAQUA_05410 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CAQUA_02185 dat; D-alanine aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CAQUA_08075 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:caqm00670]
D CAQUA_08380 folA2; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CAQUA_05785 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CAQUA_09440 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CAQUA_07695 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CAQUA_08170 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CAQUA_08165 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CAQUA_05385 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CAQUA_03725 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CAQUA_08375 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CAQUA_04615 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CAQUA_00300 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CAQUA_08085 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:caqm00860]
D CAQUA_00730 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06550 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_01315 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CAQUA_01405 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CAQUA_03530 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CAQUA_01330 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CAQUA_01320 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CAQUA_01350 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CAQUA_01355 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CAQUA_05655 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CAQUA_05025 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CAQUA_01325 cysG; Siroheme synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CAQUA_04460 sumT; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CAQUA_05505 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CAQUA_05510 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CAQUA_10460 sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CAQUA_03760 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CAQUA_03565 pspA1; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CAQUA_07550 Magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D CAQUA_07920 hmuO; Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D CAQUA_03365 copA1; Copper resistance protein A precursor K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:caqm00130]
D CAQUA_01520 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CAQUA_06560 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CAQUA_01505 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CAQUA_01495 catB; Muconate cycloisomerase 1 K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CAQUA_01470 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CAQUA_01485 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CAQUA_01460 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:caqm00900]
D CAQUA_05010 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CAQUA_04410 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CAQUA_02020 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CAQUA_07995 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CAQUA_02025 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CAQUA_04420 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CAQUA_07640 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03860 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CAQUA_07705 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CAQUA_03320 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:caqm00907]
D CAQUA_02945 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CAQUA_05495 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:caqm00523]
D CAQUA_01125 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CAQUA_01145 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CAQUA_01135 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CAQUA_06560 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CAQUA_01145 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:caqm00946]
D CAQUA_09810 bglA; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:caqm00332]
D CAQUA_03055 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CAQUA_03085 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:caqm00261]
D CAQUA_10465 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CAQUA_10470 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CAQUA_00810 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CAQUA_00815 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CAQUA_04620 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CAQUA_04610 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:caqm00521]
D CAQUA_03825 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CAQUA_02390 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CAQUA_04150 impA; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CAQUA_01125 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CAQUA_01145 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CAQUA_01135 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CAQUA_03825 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:caqm00525]
D CAQUA_01125 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CAQUA_01145 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:caqm00401]
D CAQUA_00695 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CAQUA_00640 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_04105 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CAQUA_11205 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CAQUA_11210 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CAQUA_03685 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:caqm00998]
D CAQUA_03485 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein
D CAQUA_06515 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:caqm00999]
D CAQUA_05370 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CAQUA_09810 bglA; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D CAQUA_06515 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:caqm00362]
D CAQUA_02800 catD; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CAQUA_02945 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CAQUA_02845 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CAQUA_02910 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02980 mmgC2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_07880 mmgC3; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:caqm00627]
D CAQUA_03490 ethA; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-]
D CAQUA_04250 yccX; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D CAQUA_02945 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:caqm03020]
D CAQUA_10065 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CAQUA_10060 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CAQUA_09730 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CAQUA_05360 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CAQUA_08575 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:caqm03010]
D CAQUA_06295 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CAQUA_04370 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CAQUA_09910 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CAQUA_09735 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CAQUA_09785 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CAQUA_10985 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CAQUA_09995 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CAQUA_09800 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CAQUA_09645 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CAQUA_09945 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CAQUA_09740 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CAQUA_10000 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CAQUA_09745 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CAQUA_08140 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CAQUA_04560 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CAQUA_04305 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CAQUA_09895 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CAQUA_08145 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CAQUA_09920 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CAQUA_03135 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CAQUA_01575 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CAQUA_09925 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CAQUA_09940 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CAQUA_09935 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CAQUA_09845 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CAQUA_09795 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CAQUA_01590 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CAQUA_10975 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CAQUA_01585 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CAQUA_01570 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CAQUA_09650 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CAQUA_09855 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CAQUA_09775 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CAQUA_09905 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CAQUA_09725 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CAQUA_09790 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CAQUA_04325 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CAQUA_06190 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CAQUA_03040 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CAQUA_09915 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CAQUA_09930 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CAQUA_09850 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CAQUA_07795 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CAQUA_03045 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CAQUA_08130 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CAQUA_09900 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CAQUA_09780 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CAQUA_08125 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CAQUA_08120 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CAQUA_08135 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CAQUA_11340 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CAQUA_06195 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CAQUA_02435 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D CAQUA_08600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:caqm00970]
D CAQUA_00730 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06550 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06685 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CAQUA_06660 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CAQUA_06690 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CAQUA_05245 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CAQUA_05225 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CAQUA_03340 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CAQUA_05100 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CAQUA_10750 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CAQUA_02030 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CAQUA_08015 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CAQUA_05385 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CAQUA_02820 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CAQUA_11170 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CAQUA_03985 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CAQUA_01940 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CAQUA_06975 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CAQUA_04490 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CAQUA_05195 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CAQUA_06145 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CAQUA_06140 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CAQUA_06075 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CAQUA_09405 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:caqm03060]
D CAQUA_09770 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CAQUA_01560 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CAQUA_05460 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CAQUA_05155 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CAQUA_05160 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CAQUA_10870 yidC1; Membrane protein insertase YidC precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_11330 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_05970 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_09105 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_04290 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CAQUA_04285 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CAQUA_05860 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CAQUA_07280 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CAQUA_05865 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CAQUA_04330 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CAQUA_04010 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:caqm04122]
D CAQUA_06815 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CAQUA_09315 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CAQUA_10135 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CAQUA_06795 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
D CAQUA_05805 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:caqm03018]
D CAQUA_03005 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CAQUA_03425 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CAQUA_04570 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CAQUA_07130 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CAQUA_06945 hypothetical protein K03628 rho; transcription termination factor Rho
D CAQUA_04625 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CAQUA_10350 dnaK3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_10380 dnaK4; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_01775 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_01815 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CAQUA_07975 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CAQUA_11265 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:caqm03030]
D CAQUA_00790 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_04080 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_04025 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CAQUA_00765 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CAQUA_01020 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CAQUA_03125 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CAQUA_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CAQUA_10965 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CAQUA_03405 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CAQUA_02620 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_03565 pspA1; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CAQUA_04335 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CAQUA_06300 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CAQUA_06775 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:caqm03410]
D CAQUA_06470 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CAQUA_01985 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CAQUA_07965 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CAQUA_04235 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CAQUA_11055 nei3; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CAQUA_11120 nei4; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CAQUA_08245 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CAQUA_08320 nei2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CAQUA_08045 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CAQUA_01700 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CAQUA_09410 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CAQUA_06300 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CAQUA_06775 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:caqm03420]
D CAQUA_07755 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CAQUA_06210 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CAQUA_06235 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CAQUA_05425 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CAQUA_08205 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_09005 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_09015 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_06300 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CAQUA_06775 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CAQUA_08575 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:caqm03430]
D CAQUA_08205 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_09005 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_09015 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_07645 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CAQUA_07650 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CAQUA_02620 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_04025 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CAQUA_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CAQUA_00765 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CAQUA_03125 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CAQUA_01020 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CAQUA_00790 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_04080 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_06775 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CAQUA_09290 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:caqm03440]
D CAQUA_02620 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_00020 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CAQUA_03315 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CAQUA_00775 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CAQUA_04695 recombinase A K03553 recA; recombination protein RecA
D CAQUA_06300 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CAQUA_05145 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CAQUA_05150 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CAQUA_05140 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CAQUA_00130 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_06460 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_08295 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_08365 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_09495 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_04025 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CAQUA_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CAQUA_00765 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CAQUA_03125 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CAQUA_01020 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CAQUA_00790 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_04080 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_05380 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:caqm03450]
D CAQUA_07485 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D CAQUA_07475 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:caqm03250]
D CAQUA_00315 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:caqm02010]
D CAQUA_04835 fbpA; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CAQUA_04845 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein
D CAQUA_04840 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CAQUA_02205 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CAQUA_10525 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D CAQUA_02210 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CAQUA_02215 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CAQUA_02220 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CAQUA_09465 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CAQUA_09475 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CAQUA_09470 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CAQUA_05760 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D CAQUA_05755 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CAQUA_05750 yusV; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CAQUA_09535 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein
D CAQUA_09525 mntB; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein
D CAQUA_09530 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CAQUA_04685 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CAQUA_04675 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CAQUA_04680 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CAQUA_00610 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CAQUA_00605 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CAQUA_09335 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CAQUA_09330 putative ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CAQUA_08635 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CAQUA_08640 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CAQUA_08770 irtA; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CAQUA_08765 irtB; Iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CAQUA_02240 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CAQUA_02245 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D CAQUA_04005 yheS1; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:caqm03070]
D CAQUA_05155 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CAQUA_05160 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CAQUA_01560 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CAQUA_05460 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CAQUA_09770 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CAQUA_10870 yidC1; Membrane protein insertase YidC precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_11330 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_05970 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_09105 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_04285 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CAQUA_04290 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CAQUA_05860 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CAQUA_07280 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CAQUA_05865 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:caqm02020]
D CAQUA_03000 pld1; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CAQUA_06375 pld2; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CAQUA_08725 phoD; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CAQUA_01270 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CAQUA_01275 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CAQUA_02205 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CAQUA_10525 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D CAQUA_05510 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CAQUA_08110 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CAQUA_08115 mprA; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D CAQUA_08105 htrB; Serine protease Do-like HtrB K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CAQUA_09125 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CAQUA_09130 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CAQUA_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CAQUA_09535 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein
D CAQUA_09530 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CAQUA_09525 mntB; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein
D CAQUA_07140 tcrY2; putative sensor histidine kinase TcrY K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CAQUA_00950 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CAQUA_00955 hypothetical protein K12510 tadB; tight adherence protein B
D CAQUA_03595 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_03665 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_00905 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CAQUA_02255 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CAQUA_02250 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CAQUA_03545 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:caqm02024]
D CAQUA_11205 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CAQUA_11210 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CAQUA_03840 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CAQUA_01245 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_02285 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03255 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03260 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_00905 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CAQUA_05400 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CAQUA_04120 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CAQUA_03190 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CAQUA_05165 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CAQUA_06260 appA; Oligopeptide-binding protein AppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CAQUA_03185 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CAQUA_06265 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CAQUA_03180 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CAQUA_06270 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CAQUA_03175 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CAQUA_06275 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CAQUA_10870 yidC1; Membrane protein insertase YidC precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_11330 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_01560 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CAQUA_05460 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CAQUA_09770 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CAQUA_05970 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_09105 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_04285 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CAQUA_04290 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CAQUA_04955 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CAQUA_03425 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D CAQUA_03895 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:caqm01502]
D CAQUA_07140 tcrY2; putative sensor histidine kinase TcrY K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CAQUA_06485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CAQUA_09605 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CAQUA_03905 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CAQUA_03910 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CAQUA_03925 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:caqm01503]
D CAQUA_11300 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CAQUA_00315 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:caqm01000]
C 01001 Protein kinases [BR:caqm01001]
D CAQUA_01655 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CAQUA_00325 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CAQUA_00330 pknA1; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CAQUA_00515 pknA2; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CAQUA_05205 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CAQUA_10175 hipA; Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CAQUA_03845 pknL; Serine/threonine-protein kinase PknL K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D CAQUA_01270 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CAQUA_08110 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CAQUA_09125 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CAQUA_07140 tcrY2; putative sensor histidine kinase TcrY K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CAQUA_02075 tcrY1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:caqm01009]
D CAQUA_09140 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CAQUA_00345 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CAQUA_02465 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:caqm01002]
D CAQUA_04010 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CAQUA_05585 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_05605 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_05630 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_09515 guaA3; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CAQUA_03815 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CAQUA_02160 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CAQUA_09615 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CAQUA_03775 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CAQUA_10365 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D CAQUA_10200 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CAQUA_10215 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CAQUA_10865 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CAQUA_02695 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CAQUA_00555 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CAQUA_03750 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CAQUA_03460 cpg2; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CAQUA_07360 dapE3; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CAQUA_01765 dapE2; putative succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CAQUA_04435 map; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CAQUA_09760 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CAQUA_01880 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CAQUA_08105 htrB; Serine protease Do-like HtrB K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CAQUA_09695 aprE; Subtilisin E precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CAQUA_02105 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CAQUA_09395 dacB2; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CAQUA_01855 dacB1; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CAQUA_02790 clpP1; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CAQUA_02795 clpP2; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CAQUA_08990 lon; Lon protease K07177 K07177; Lon-like protease
D CAQUA_04870 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CAQUA_04330 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:caqm01003]
D CAQUA_05890 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CAQUA_08030 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CAQUA_05120 pimA; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CAQUA_03820 pimB; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CAQUA_01515 mgtA1; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CAQUA_07305 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CAQUA_06925 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CAQUA_06650 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D CAQUA_03855 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CAQUA_05525 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CAQUA_00560 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CAQUA_00565 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CAQUA_08615 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CAQUA_08625 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CAQUA_10660 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CAQUA_05035 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CAQUA_10680 aftC; Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CAQUA_10570 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CAQUA_09715 hypothetical protein K22902 K22902; D-galactosaminyltransferase
D CAQUA_00600 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CAQUA_10675 glfT2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CAQUA_09185 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CAQUA_02050 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CAQUA_07345 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:caqm01005]
D CAQUA_06925 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:caqm01011]
D CAQUA_02350 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CAQUA_01240 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CAQUA_03930 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CAQUA_03915 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CAQUA_03900 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CAQUA_06485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CAQUA_09605 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CAQUA_02505 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CAQUA_03910 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CAQUA_03925 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CAQUA_05705 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CAQUA_11280 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CAQUA_03895 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CAQUA_00335 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CAQUA_09395 dacB2; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CAQUA_01855 dacB1; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CAQUA_03815 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CAQUA_10200 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CAQUA_10215 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CAQUA_10865 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CAQUA_05255 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CAQUA_11300 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:caqm01004]
D CAQUA_03685 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CAQUA_05130 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CAQUA_10630 ppsA; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13
D CAQUA_01245 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_02285 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03255 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03260 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_10635 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D CAQUA_03830 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:caqm01006]
D CAQUA_03860 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CAQUA_07705 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CAQUA_03320 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CAQUA_04825 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CAQUA_01460 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CAQUA_05505 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CAQUA_10665 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:caqm01007]
D CAQUA_00730 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06550 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06075 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CAQUA_09405 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CAQUA_02030 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CAQUA_06975 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CAQUA_08015 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CAQUA_03985 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CAQUA_02820 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CAQUA_11170 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CAQUA_01940 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CAQUA_05225 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CAQUA_05195 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CAQUA_03340 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CAQUA_10750 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CAQUA_04490 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CAQUA_05100 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CAQUA_05245 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CAQUA_06145 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CAQUA_06140 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CAQUA_10500 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CAQUA_00640 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_04105 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CAQUA_03220 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CAQUA_06120 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CAQUA_01405 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CAQUA_03530 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CAQUA_03755 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CAQUA_08510 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:caqm00194]
D CAQUA_06880 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CAQUA_06885 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CAQUA_06890 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CAQUA_06895 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CAQUA_06900 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CAQUA_06905 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CAQUA_06910 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CAQUA_06915 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:caqm03000]
D CAQUA_07205 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CAQUA_04890 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CAQUA_04865 lacR; Lactose phosphotransferase system repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CAQUA_02690 mngR; Mannosyl-D-glycerate transport/metabolism system repressor MngR K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D CAQUA_03195 DNA-binding transcriptional regulator FrlR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CAQUA_05820 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CAQUA_04090 tetR; Tetracycline repressor protein class B K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D CAQUA_02345 transcriptional regulator MalT K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CAQUA_10335 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CAQUA_03330 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CAQUA_00905 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CAQUA_09215 kmtR; HTH-type transcriptional regulator KmtR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CAQUA_07520 cmtR1; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CAQUA_08395 cmtR2; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CAQUA_03335 smtB; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D CAQUA_04665 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D CAQUA_04925 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CAQUA_09520 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CAQUA_09250 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CAQUA_00885 whiB1; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CAQUA_09055 whiB2; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CAQUA_09175 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CAQUA_09565 whiB3; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CAQUA_11315 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CAQUA_02015 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CAQUA_06110 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CAQUA_03275 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CAQUA_00065 tenA; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CAQUA_05320 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CAQUA_11260 hypothetical protein K07735 algH; putative transcriptional regulator
D CAQUA_04880 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CAQUA_03880 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:caqm03021]
D CAQUA_08575 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CAQUA_09730 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CAQUA_10065 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CAQUA_10060 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CAQUA_05360 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CAQUA_04955 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D CAQUA_04930 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CAQUA_00820 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CAQUA_07290 sigE2; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CAQUA_08750 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CAQUA_09065 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CAQUA_09560 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CAQUA_11285 sigM; ECF RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CAQUA_04505 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CAQUA_05305 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CAQUA_01565 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CAQUA_07725 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CAQUA_06945 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:caqm03019]
D CAQUA_03005 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CAQUA_04230 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CAQUA_04625 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CAQUA_02595 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CAQUA_07130 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CAQUA_03425 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CAQUA_04570 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CAQUA_06945 hypothetical protein K03628 rho; transcription termination factor Rho
D CAQUA_10350 dnaK3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_10380 dnaK4; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_01775 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_01815 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CAQUA_07975 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CAQUA_11265 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CAQUA_11050 rraA1; Putative regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A
D CAQUA_11115 rraA2; Putative regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A
D CAQUA_05430 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D CAQUA_05870 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CAQUA_04885 hrpB2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CAQUA_00480 hrpB1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:caqm03011]
D CAQUA_06295 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CAQUA_04370 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CAQUA_09910 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CAQUA_09735 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CAQUA_09785 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CAQUA_10985 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CAQUA_09995 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CAQUA_09800 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CAQUA_09645 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CAQUA_09945 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CAQUA_09740 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CAQUA_10000 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CAQUA_09745 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CAQUA_08140 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CAQUA_04560 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CAQUA_04305 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CAQUA_09895 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CAQUA_08145 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CAQUA_09920 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CAQUA_03135 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CAQUA_01575 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CAQUA_09925 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CAQUA_09940 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CAQUA_09935 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CAQUA_09845 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CAQUA_09795 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CAQUA_10975 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CAQUA_01585 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CAQUA_01570 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CAQUA_01590 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CAQUA_09650 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CAQUA_09855 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CAQUA_09775 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CAQUA_09905 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CAQUA_09725 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CAQUA_09790 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CAQUA_04325 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CAQUA_06190 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CAQUA_03040 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CAQUA_09915 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CAQUA_09930 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CAQUA_09850 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CAQUA_03045 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CAQUA_08130 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CAQUA_09900 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CAQUA_09780 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CAQUA_08125 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CAQUA_08120 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CAQUA_08135 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CAQUA_11340 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CAQUA_06195 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CAQUA_02435 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D CAQUA_07795 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CAQUA_08600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:caqm03009]
D CAQUA_04230 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CAQUA_02595 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CAQUA_03310 era1; GTPase Era K03595 era; GTPase
D CAQUA_03050 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CAQUA_04505 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CAQUA_05305 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CAQUA_01565 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CAQUA_08000 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CAQUA_05390 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CAQUA_04465 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D CAQUA_06455 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CAQUA_03285 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CAQUA_11325 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CAQUA_03885 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CAQUA_08025 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CAQUA_06055 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CAQUA_07320 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CAQUA_02035 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CAQUA_04400 rlmN; Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CAQUA_10895 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CAQUA_06005 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CAQUA_04015 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CAQUA_09590 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CAQUA_04315 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CAQUA_03005 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CAQUA_05250 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CAQUA_07130 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CAQUA_09085 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CAQUA_05995 der; GTPase Der K03977 engA; GTPase
D CAQUA_04860 hflX; GTPase HflX K03665 hflX; GTPase
D CAQUA_06930 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CAQUA_05175 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CAQUA_04520 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CAQUA_04500 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D CAQUA_00540 ribosome-associated protein K14761 rlbA; ribosome-associated protein
D CAQUA_03100 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CAQUA_03295 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CAQUA_07625 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D CAQUA_04225 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:caqm03016]
D CAQUA_00730 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06550 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_04490 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CAQUA_03985 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CAQUA_11170 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CAQUA_08015 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CAQUA_06975 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CAQUA_01940 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CAQUA_05225 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CAQUA_05245 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CAQUA_03340 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CAQUA_05100 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CAQUA_10750 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CAQUA_02030 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CAQUA_02820 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CAQUA_05195 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CAQUA_06145 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CAQUA_06140 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CAQUA_06075 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CAQUA_09405 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CAQUA_05800 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CAQUA_10605 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CAQUA_09720 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CAQUA_04545 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CAQUA_06815 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CAQUA_06930 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CAQUA_04825 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CAQUA_08370 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CAQUA_02515 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CAQUA_05015 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CAQUA_04130 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CAQUA_09070 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CAQUA_00705 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CAQUA_04710 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CAQUA_04320 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CAQUA_09445 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CAQUA_06180 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CAQUA_10895 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CAQUA_06795 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CAQUA_02180 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D CAQUA_00720 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CAQUA_01860 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CAQUA_09595 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CAQUA_09585 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CAQUA_04570 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CAQUA_08265 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:caqm03012]
D CAQUA_04515 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CAQUA_06200 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CAQUA_04375 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CAQUA_09985 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CAQUA_09990 fusA; Elongation factor G K02355 fusA; elongation factor G
D CAQUA_06940 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CAQUA_04390 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D CAQUA_06935 prmC2; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CAQUA_07800 pth1; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CAQUA_07810 pth2; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CAQUA_09750 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CAQUA_05300 efp; Elongation factor P K02356 efp; elongation factor P
D CAQUA_08690 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CAQUA_07840 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CAQUA_07575 arfB; Peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
D CAQUA_07620 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:caqm03110]
D CAQUA_10140 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CAQUA_01965 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CAQUA_02805 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CAQUA_10350 dnaK3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_10380 dnaK4; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_01775 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_03280 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CAQUA_10340 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CAQUA_10345 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CAQUA_04055 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CAQUA_09575 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CAQUA_01880 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CAQUA_06915 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CAQUA_01010 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CAQUA_09695 aprE; Subtilisin E precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CAQUA_00315 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CAQUA_05185 cypB; Peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CAQUA_10950 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin
D CAQUA_11295 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:caqm04131]
D CAQUA_02995 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CAQUA_05445 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_07910 gapA; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_01265 gpmA1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CAQUA_04180 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:caqm04121]
D CAQUA_05840 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:caqm03051]
D CAQUA_05805 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D CAQUA_05845 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CAQUA_05850 hypothetical protein K13572 pafB; proteasome accessory factor B
D CAQUA_05855 hypothetical protein K13573 pafC; proteasome accessory factor C
D CAQUA_05835 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:caqm03032]
D CAQUA_07205 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CAQUA_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CAQUA_10965 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CAQUA_03405 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CAQUA_02620 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_04025 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CAQUA_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CAQUA_03125 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CAQUA_01020 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CAQUA_00790 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_04080 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_00765 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CAQUA_03565 pspA1; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CAQUA_04335 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CAQUA_06300 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CAQUA_06775 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CAQUA_09290 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CAQUA_00105 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CAQUA_00035 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CAQUA_00995 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:caqm03036]
D CAQUA_07205 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CAQUA_04230 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CAQUA_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CAQUA_04265 smc3; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D CAQUA_06015 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CAQUA_06010 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CAQUA_08640 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CAQUA_03895 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CAQUA_04635 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CAQUA_03935 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CAQUA_03920 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CAQUA_08635 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CAQUA_03940 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CAQUA_11300 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CAQUA_03955 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CAQUA_06020 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CAQUA_11320 soj3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CAQUA_11315 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CAQUA_11325 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CAQUA_04360 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CAQUA_06025 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CAQUA_07275 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CAQUA_04255 bepA; Adenosine monophosphate-protein transferase K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CAQUA_09890 fic; putative adenosine monophosphate-protein transferase fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CAQUA_10330 Adenosine monophosphate-protein transferase SoFic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CAQUA_05440 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:caqm03400]
D CAQUA_02415 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CAQUA_06470 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CAQUA_07965 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CAQUA_01985 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CAQUA_08575 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CAQUA_01670 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CAQUA_04975 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CAQUA_08045 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CAQUA_04235 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CAQUA_11055 nei3; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CAQUA_11120 nei4; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CAQUA_08245 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CAQUA_08320 nei2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CAQUA_01700 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CAQUA_09410 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CAQUA_06775 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CAQUA_06300 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CAQUA_06210 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CAQUA_06235 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CAQUA_05425 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CAQUA_08205 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_09005 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_09015 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CAQUA_10065 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CAQUA_10060 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CAQUA_09730 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CAQUA_05360 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CAQUA_07755 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CAQUA_07645 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CAQUA_07650 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CAQUA_04025 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CAQUA_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CAQUA_03125 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CAQUA_01020 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CAQUA_00790 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_04080 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CAQUA_00765 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CAQUA_02620 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_09290 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CAQUA_04695 recombinase A K03553 recA; recombination protein RecA
D CAQUA_05145 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CAQUA_05150 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CAQUA_05140 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CAQUA_05380 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CAQUA_02005 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D CAQUA_00020 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CAQUA_00130 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_06460 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_08295 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_08365 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_09495 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CAQUA_03315 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CAQUA_00775 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CAQUA_06045 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CAQUA_07485 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D CAQUA_07475 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CAQUA_00105 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CAQUA_00035 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CAQUA_00995 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CAQUA_03990 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CAQUA_04870 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CAQUA_09485 DNA polymerase IV K14161 imuB; protein ImuB
D CAQUA_09460 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CAQUA_04700 recX; Regulatory protein RecX K03565 recX; regulatory protein
D CAQUA_02470 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CAQUA_08360 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CAQUA_06495 mutT1; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CAQUA_06030 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CAQUA_02450 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CAQUA_02455 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CAQUA_04525 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:caqm03029]
D CAQUA_04515 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CAQUA_06200 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CAQUA_04375 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CAQUA_09985 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CAQUA_09990 fusA; Elongation factor G K02355 fusA; elongation factor G
D CAQUA_03310 era1; GTPase Era K03595 era; GTPase
D CAQUA_06075 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CAQUA_11170 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CAQUA_05225 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CAQUA_03340 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CAQUA_06975 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CAQUA_06685 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CAQUA_06660 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CAQUA_06690 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CAQUA_02620 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CAQUA_10350 dnaK3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_10380 dnaK4; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_10345 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CAQUA_01775 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_09575 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CAQUA_03280 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CAQUA_10340 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CAQUA_06815 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CAQUA_07275 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CAQUA_05505 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CAQUA_05510 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CAQUA_10870 yidC1; Membrane protein insertase YidC precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_11330 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:caqm02000]
D CAQUA_08770 irtA; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CAQUA_08765 irtB; Iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CAQUA_03225 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CAQUA_07255 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CAQUA_02240 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CAQUA_02245 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D CAQUA_04005 yheS1; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
D CAQUA_07985 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CAQUA_04835 fbpA; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CAQUA_04845 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein
D CAQUA_04840 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CAQUA_00215 Putative thiamine biosynthesis protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CAQUA_03510 Putative thiamine biosynthesis protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CAQUA_00220 ssuC; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CAQUA_00225 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CAQUA_02205 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CAQUA_10525 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D CAQUA_02210 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CAQUA_02215 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CAQUA_02220 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CAQUA_09465 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CAQUA_09475 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CAQUA_09470 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CAQUA_01660 glnH1; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CAQUA_06430 glnH2; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CAQUA_06435 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D CAQUA_06440 glnQ; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CAQUA_03190 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CAQUA_05165 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CAQUA_06260 appA; Oligopeptide-binding protein AppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CAQUA_03185 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CAQUA_06265 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CAQUA_03180 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CAQUA_06270 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CAQUA_03175 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CAQUA_06275 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CAQUA_07935 hmuT; Hemin-binding periplasmic protein HmuT precursor K25132 hmuT; heme transport system substrate-binding protein
D CAQUA_07940 hmuU; Hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D CAQUA_07945 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CAQUA_05760 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D CAQUA_05755 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CAQUA_05750 yusV; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CAQUA_05775 yfiY; putative siderophore-binding lipoprotein YfiY precursor K25109 sirA; iron-siderophore transport system substrate-binding protein
D CAQUA_06840 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CAQUA_09535 putative periplasmic iron-binding protein precursor K11601 mntC; manganese transport system substrate-binding protein
D CAQUA_09525 mntB; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein
D CAQUA_09530 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D CAQUA_04685 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CAQUA_04675 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CAQUA_04680 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CAQUA_08805 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CAQUA_08810 ABC-type cobalt transport system, permease component K16925 ykoE; energy-coupling factor transport system permease protein
D CAQUA_02130 high-affinity zinc transporter periplasmic component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CAQUA_02120 znuB; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CAQUA_02125 putative ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D CAQUA_00610 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CAQUA_00605 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CAQUA_09335 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CAQUA_09330 putative ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CAQUA_08635 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CAQUA_08640 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CAQUA_01680 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CAQUA_02640 ybhR; Inner membrane transport permease YbhR K01992 ABC-2.P; ABC-2 type transport system permease protein
D CAQUA_05515 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CAQUA_08570 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CAQUA_08780 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CAQUA_08785 drrB; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D CAQUA_01675 yxlF1; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_02645 ybhF1; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_02865 yxlF2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_05520 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_08565 ybhF2; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_08790 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_10925 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CAQUA_02375 ytrF; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D CAQUA_03080 macB2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D CAQUA_02370 yxdL; ABC transporter ATP-binding protein YxdL K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CAQUA_03075 macB1; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CAQUA_08190 macB3; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CAQUA_05540 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CAQUA_10515 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D CAQUA_04530 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D CAQUA_05090 qacA1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D CAQUA_10825 ynfM; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CAQUA_10960 naiP; Putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CAQUA_02555 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin Z
D CAQUA_09010 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D CAQUA_06090 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D CAQUA_08095 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CAQUA_06635 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D CAQUA_00655 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D CAQUA_05915 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D CAQUA_02380 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D CAQUA_02385 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D CAQUA_03300 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CAQUA_05935 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CAQUA_05940 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CAQUA_07370 gabP; GABA permease K16237 aroP; aromatic amino acid permease
D CAQUA_00475 arcD; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CAQUA_06600 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CAQUA_02290 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D CAQUA_10610 ydfJ2; Membrane protein YdfJ K20470 mmpL3; trehalose monomycolate/heme transporter
D CAQUA_06305 rhtA; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D CAQUA_04120 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CAQUA_06980 lutP; L-lactate permease K03303 lutP; lactate permease
D CAQUA_07115 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D CAQUA_10690 nhaK; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CAQUA_08530 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D CAQUA_06790 chrA; Chromate transport protein K07240 chrA; chromate transporter
D CAQUA_09210 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter
D CAQUA_00855 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CAQUA_01755 mrpA2; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CAQUA_00850 mnhC1; Na(+)/H(+) antiporter subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CAQUA_01750 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CAQUA_00845 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CAQUA_01745 mrpD2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CAQUA_00840 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CAQUA_01740 mrpE; Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CAQUA_00835 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CAQUA_01735 mrpF; Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CAQUA_00830 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CAQUA_01730 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CAQUA_11280 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CAQUA_01455 Membrane transport protein K13936 mdcF; malonate transporter and related proteins
D CAQUA_00530 rhtC1; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CAQUA_02575 rhtC2; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CAQUA_04985 rhtC3; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CAQUA_11255 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D CAQUA_11250 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D CAQUA_00725 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CAQUA_03325 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CAQUA_07495 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CAQUA_03920 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CAQUA_02755 efeU; Ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter
D CAQUA_02750 Efem/EfeO family lipoprotein precursor K07224 efeO; iron uptake system component EfeO
D CAQUA_02745 efeN2; putative deferrochelatase/peroxidase EfeN precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CAQUA_01420 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D CAQUA_10615 hypothetical protein K20468 K20468; putative heme transporter
D CAQUA_01490 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D CAQUA_05095 hypothetical protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:caqm02044]
D CAQUA_00950 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CAQUA_00955 hypothetical protein K12510 tadB; tight adherence protein B
D CAQUA_03960 YGGT family protein K02221 yggT; YggT family protein
D CAQUA_03115 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D CAQUA_09670 ESX-1 secretion system protein K27086 eccC; ESX secretion system protein EccC
D CAQUA_09690 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D CAQUA_09695 aprE; Subtilisin E precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CAQUA_09655 esxA; 6 kDa early secretory antigenic target K14956 esx; ESAT-6 family protein
D CAQUA_09660 WXG domain conatining protein K14956 esx; ESAT-6 family protein
D CAQUA_05970 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_09105 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CAQUA_05155 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CAQUA_01560 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CAQUA_05160 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CAQUA_05460 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CAQUA_09770 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CAQUA_04290 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CAQUA_04285 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CAQUA_10870 yidC1; Membrane protein insertase YidC precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_11330 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CAQUA_05860 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CAQUA_07280 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CAQUA_05865 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:caqm02042]
D CAQUA_03300 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CAQUA_05935 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CAQUA_05940 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CAQUA_07460 hemeolysin-III related K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:caqm02022]
D CAQUA_01270 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CAQUA_01275 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CAQUA_08110 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CAQUA_08115 mprA; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D CAQUA_09125 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CAQUA_09130 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CAQUA_07140 tcrY2; putative sensor histidine kinase TcrY K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CAQUA_02075 tcrY1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CAQUA_02070 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:caqm02035]
D CAQUA_00950 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:caqm04812]
D CAQUA_03940 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CAQUA_06020 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CAQUA_11320 soj3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CAQUA_11315 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:caqm04147]
D CAQUA_03425 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CAQUA_05445 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_07910 gapA; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CAQUA_05450 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CAQUA_04180 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CAQUA_00315 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CAQUA_01775 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_09570 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CAQUA_10350 dnaK3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_10380 dnaK4; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CAQUA_08225 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CAQUA_09540 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CAQUA_09545 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CAQUA_09985 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CAQUA_09825 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CAQUA_01245 fadD1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_02285 fadD2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03255 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_03260 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CAQUA_10515 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D CAQUA_02840 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_03690 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_07890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CAQUA_09140 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CAQUA_09765 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CAQUA_05170 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CAQUA_06100 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CAQUA_06105 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CAQUA_01370 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CAQUA_03580 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D CAQUA_06850 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CAQUA_10725 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CAQUA_03595 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_03665 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CAQUA_01330 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CAQUA_06590 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CAQUA_08165 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CAQUA_01170 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CAQUA_02920 etfA1; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CAQUA_06820 etfA2; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CAQUA_05485 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CAQUA_05455 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CAQUA_01265 gpmA1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:caqm02048]
D CAQUA_08685 cas2; CRISPR-associated nuclease/helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CAQUA_00180 addA; ATP-dependent helicase/nuclease subunit A K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D CAQUA_08680 cse2; CRISPR-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA
D CAQUA_08675 CRISPR-associated protein Cse2 K19046 casB; CRISPR system Cascade subunit CasB
D CAQUA_08670 casC; CRISPR system Cascade subunit CasC K19124 casC; CRISPR system Cascade subunit CasC
D CAQUA_08665 casD; CRISPR system Cascade subunit CasD K19125 casD; CRISPR system Cascade subunit CasD
D CAQUA_08660 cse1; CRISPR-associated endoribonuclease Cse3 K19126 casE; CRISPR system Cascade subunit CasE
D CAQUA_04755 hsdR; Type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CAQUA_04760 Putative type-1 restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CAQUA_04765 putative type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CAQUA_09290 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CAQUA_07205 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CAQUA_04770 mrr; Mrr restriction system protein K07448 mrr; restriction system protein
D CAQUA_04480 yoeB1; Toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D CAQUA_05810 yoeB2; Toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D CAQUA_04475 relJ; Antitoxin RelJ K19159 yefM; antitoxin YefM
D CAQUA_05815 yefM; Antitoxin YefM K19159 yefM; antitoxin YefM
D CAQUA_05205 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CAQUA_10175 hipA; Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CAQUA_04705 parE1; Toxin ParE1 K19092 parE1_3_4; toxin ParE1/3/4
D CAQUA_08280 doc; Toxin Doc K07341 doc; death on curing protein
D CAQUA_00085 ybaQ; putative HTH-type transcriptional regulator YbaQ K21498 higA-1; antitoxin HigA-1
D CAQUA_08265 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D CAQUA_08350 fitB; Toxin FitB K07062 fitB; toxin FitB [EC:3.1.-.-]
D CAQUA_08340 hypothetical protein K21495 fitA; antitoxin FitA
D CAQUA_03940 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CAQUA_00730 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06550 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CAQUA_06815 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:caqm01504]
D CAQUA_04005 yheS1; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
D CAQUA_05090 qacA1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D CAQUA_07140 tcrY2; putative sensor histidine kinase TcrY K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:caqm03100]
D CAQUA_08600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CAQUA_00570 phbB; Acetoacetyl-CoA reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CAQUA_02670 L-gulono-1,4-lactone dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D CAQUA_00575 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CAQUA_01525 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CAQUA_02765 Nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CAQUA_04440 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CAQUA_10815 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CAQUA_05030 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CAQUA_01005 efeN1; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CAQUA_02540 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CAQUA_07445 yfeX; putative deferrochelatase/peroxidase YfeX K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CAQUA_08215 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D CAQUA_07610 merA; Mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D CAQUA_01630 fprA1; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CAQUA_05905 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CAQUA_02200 mshD1; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CAQUA_05885 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CAQUA_10575 oatA4; O-acetyltransferase OatA K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D CAQUA_08535 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CAQUA_01255 mshA1; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CAQUA_04175 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CAQUA_06465 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CAQUA_03600 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CAQUA_02000 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CAQUA_04455 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CAQUA_09205 arsC1; Arsenate-mycothiol transferase ArsC1 K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D CAQUA_05745 fes; Enterochelin esterase K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109]
D CAQUA_07245 pnbA; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CAQUA_10640 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D CAQUA_02630 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CAQUA_03105 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CAQUA_08010 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CAQUA_06870 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D CAQUA_07435 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D CAQUA_01710 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CAQUA_07400 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CAQUA_07715 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CAQUA_10150 ramA; (R)-stereoselective amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CAQUA_06400 yxeP1; putative hydrolase YxeP K23726 agaA; Nalpha-acyl-L-glutamine aminoacylase [EC:3.5.1.133]
D CAQUA_11060 nnr1; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CAQUA_11130 nnr2; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CAQUA_05715 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CAQUA_10625 accD2; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D CAQUA_03390 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CAQUA_07525 zosA; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CAQUA_06985 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CAQUA_06990 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CAQUA_06995 lutC; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CAQUA_05550 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CAQUA_02925 etfB1; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D CAQUA_06825 etfB2; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CAQUA_02600 isfD; Sulfoacetaldehyde reductase K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D CAQUA_02445 Putative NrdI-like protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CAQUA_03950 hypothetical protein K06997 yggS; PLP dependent protein
D CAQUA_06670 ydaF1; Putative ribosomal N-acetyltransferase YdaF K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D CAQUA_08550 rpf2; Resuscitation-promoting factor Rpf2 precursor K21687 rpfA; resuscitation-promoting factor RpfA
D CAQUA_08005 rpf1; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
D CAQUA_01115 Undecaprenyl-phosphate mannosyltransferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D CAQUA_08040 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CAQUA_00985 cspA; putative cold shock protein A K03704 cspA; cold shock protein
D CAQUA_08545 cspD; Cold shock-like protein CspD K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D CAQUA_02480 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CAQUA_02785 tig; Trigger factor K03545 tig; trigger factor
D CAQUA_08630 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CAQUA_02440 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D CAQUA_04350 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D CAQUA_01425 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CAQUA_04345 hypothetical protein K07460 yraN; putative endonuclease
D CAQUA_05790 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease
D CAQUA_04355 hypothetical protein K04096 smf; DNA processing protein
D CAQUA_05235 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CAQUA_08910 Integrase core domain protein K07482 K07482; transposase, IS30 family
D CAQUA_02900 Transposase K07483 K07483; transposase
D CAQUA_04800 Transposase K07483 K07483; transposase
D CAQUA_06385 Transposase K07483 K07483; transposase
D CAQUA_08445 Transposase K07483 K07483; transposase
D CAQUA_08465 Transposase K07483 K07483; transposase
D CAQUA_08860 Transposase K07483 K07483; transposase
D CAQUA_08885 Transposase K07483 K07483; transposase
D CAQUA_00250 hypothetical protein K07485 K07485; transposase
D CAQUA_00155 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_01050 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_02890 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_02905 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_07170 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_08455 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_08825 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_08870 Transposase, Mutator family K07493 K07493; putative transposase
D CAQUA_00685 Integrase core domain protein K07497 K07497; putative transposase
D CAQUA_01070 Integrase core domain protein K07497 K07497; putative transposase
D CAQUA_06320 Integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CAQUA_04670 PspA/IM30 family protein K03969 pspA; phage shock protein A
D CAQUA_00770 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CAQUA_10790 proY; Proline-specific permease ProY K03293 TC.AAT; amino acid transporter, AAT family
D CAQUA_01385 sglT; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CAQUA_04240 alsT1; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CAQUA_04895 alsT2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CAQUA_03205 brnQ; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CAQUA_06585 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D CAQUA_07410 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CAQUA_05625 hypothetical protein K07166 K07166; ACT domain-containing protein
D CAQUA_03290 ybeZ1; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CAQUA_07680 ybeZ2; PhoH-like protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CAQUA_03650 Glycosyl hydrolases family 25 K07273 acm; lysozyme
D CAQUA_06810 acm; Lysozyme M1 precursor K07273 acm; lysozyme
D CAQUA_01110 hypothetical protein K09153 K09153; small membrane protein
C 99994 Others
D CAQUA_02230 hypothetical protein K02039 phoU; phosphate transport system protein
D CAQUA_07530 czcO; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CAQUA_00980 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CAQUA_02680 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin
D CAQUA_00715 ydfJ1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CAQUA_05530 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CAQUA_05535 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CAQUA_07855 Ribonuclease BN-like family protein K07058 K07058; membrane protein
D CAQUA_09400 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein
D CAQUA_10850 hypothetical protein K07146 K07146; UPF0176 protein
D CAQUA_11020 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D CAQUA_00285 ABC-2 family transporter protein K01421 yhgE; putative membrane protein
D CAQUA_11080 yidH1; Inner membrane protein YidH K00389 yidH; putative membrane protein
D CAQUA_11155 yidH2; Inner membrane protein YidH K00389 yidH; putative membrane protein
D CAQUA_00630 Membrane protein of unknown function K08972 K08972; putative membrane protein
D CAQUA_09450 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D CAQUA_03155 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein
D CAQUA_03265 hypothetical protein K06867 K06867; uncharacterized protein
D CAQUA_04730 hypothetical protein K06926 K06926; uncharacterized protein
D CAQUA_04790 hypothetical protein K06926 K06926; uncharacterized protein
D CAQUA_02330 hypothetical protein K06975 K06975; uncharacterized protein
D CAQUA_02115 hypothetical protein K06986 K06986; uncharacterized protein
D CAQUA_00545 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D CAQUA_05220 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D CAQUA_08240 Ribonuclease VapC43 K07064 K07064; uncharacterized protein
D CAQUA_08270 Ribonuclease VapC37 K07064 K07064; uncharacterized protein
D CAQUA_05315 Epimerase family protein K07071 K07071; uncharacterized protein
D CAQUA_04135 Nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein
D CAQUA_07875 KsdD-like steroid dehydrogenase K07077 K07077; uncharacterized protein
D CAQUA_08590 hypothetical protein K07090 K07090; uncharacterized protein
D CAQUA_10450 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CAQUA_10455 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CAQUA_00870 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D CAQUA_00470 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D CAQUA_00070 hypothetical protein K07133 K07133; uncharacterized protein
D CAQUA_08325 hypothetical protein K07133 K07133; uncharacterized protein
D CAQUA_09840 hypothetical protein K07133 K07133; uncharacterized protein
D CAQUA_03560 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D CAQUA_11335 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D CAQUA_05955 hypothetical protein K08999 K08999; uncharacterized protein
D CAQUA_03435 hypothetical protein K09009 K09009; uncharacterized protein
D CAQUA_00875 Yqey-like protein K09117 K09117; uncharacterized protein
D CAQUA_08975 hypothetical protein K09118 K09118; uncharacterized protein
D CAQUA_07420 hypothetical protein K09146 K09146; uncharacterized protein
D CAQUA_05620 hypothetical protein K09157 K09157; uncharacterized protein
D CAQUA_09455 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D CAQUA_07425 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D CAQUA_06080 hypothetical protein K09791 K09791; uncharacterized protein
D CAQUA_04485 hypothetical protein K09861 K09861; uncharacterized protein
D CAQUA_04510 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024