+D GENES KO
#
KEGG Orthology (KO) - Croceibacter atlanticus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cat00010]
D CA2559_05125 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CA2559_02300 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CA2559_12268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CA2559_13483 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CA2559_07856 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_12783 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_05115 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_03315 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CA2559_12103 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CA2559_05865 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CA2559_03130 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CA2559_05455 pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CA2559_13273 dihydrolipoamide acetyltransferase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CA2559_05450 Dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_10033 Zinc-containing alcohol dehydrogenase superfamily protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CA2559_12718 putative haloacid dehalogenase-like hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_01655 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:cat00020]
D CA2559_05880 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CA2559_00945 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CA2559_06770 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CA2559_02000 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_02005 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_05240 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_08196 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CA2559_08536 Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CA2559_04695 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CA2559_04690 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CA2559_04700 Succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CA2559_09838 FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CA2559_10083 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CA2559_01655 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CA2559_05455 pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CA2559_13273 dihydrolipoamide acetyltransferase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CA2559_05450 Dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cat00030]
D CA2559_05125 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CA2559_12473 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CA2559_00870 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CA2559_00875 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CA2559_10763 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CA2559_03435 ribose 5-phosphate isomerase B, putative K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_04015 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CA2559_11453 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CA2559_11458 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CA2559_12268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CA2559_02300 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cat00040]
D CA2559_11503 putative pectin degradation protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D CA2559_13173 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_12473 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cat00051]
D CA2559_01230 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CA2559_12883 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CA2559_08836 putative phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CA2559_05435 putative mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CA2559_02910 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CA2559_02915 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CA2559_02300 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CA2559_11518 putative alginate lyase precursor K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D CA2559_12268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CA2559_13483 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CA2559_03435 ribose 5-phosphate isomerase B, putative K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cat00052]
D CA2559_03925 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:cat00053]
D CA2559_13173 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cat00500]
D CA2559_01425 putative glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CA2559_00080 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CA2559_05105 alpha-amylase, putative K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CA2559_05100 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CA2559_05085 Trehalose/maltose hydrolase (phosphorylase) K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D CA2559_05080 predicted phosphatase/phosphohexomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_05125 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CA2559_01230 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cat00520]
D CA2559_11048 putative hydrolase/beta lactamase fusion protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CA2559_01230 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CA2559_01415 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CA2559_09758 glucokinase regulator-related protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CA2559_06625 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CA2559_09593 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CA2559_07886 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CA2559_07305 N-acetylneuraminic acid phosphate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D CA2559_13098 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CA2559_13093 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CA2559_13373 pigmentation and extracellular proteinase regulator K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CA2559_13088 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D CA2559_13083 UDP-glucose/GDP-mannose dehydrogenase family protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CA2559_13073 capsular polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CA2559_13043 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CA2559_13063 putative NeuA K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_13173 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CA2559_03925 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CA2559_05125 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CA2559_12883 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CA2559_08836 putative phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CA2559_05435 putative mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CA2559_02910 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CA2559_02915 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:cat00620]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CA2559_05455 pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CA2559_13273 dihydrolipoamide acetyltransferase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CA2559_05450 Dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_10033 Zinc-containing alcohol dehydrogenase superfamily protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_03130 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CA2559_00850 Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CA2559_02350 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CA2559_02355 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CA2559_12273 acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_06310 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CA2559_11813 Rhodanese-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CA2559_12628 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CA2559_01220 NADP-dependent malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CA2559_10083 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CA2559_09838 FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CA2559_01655 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CA2559_12308 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cat00630]
D CA2559_12313 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CA2559_12308 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CA2559_05880 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CA2559_00945 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_03285 Lactoylglutathione lyase and related lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CA2559_11343 propionlyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CA2559_07125 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_07140 methylmalonyl-COA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_11433 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D CA2559_07500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CA2559_09233 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CA2559_07640 glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CA2559_11173 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_01205 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CA2559_11453 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CA2559_11953 esterase/lipase/thioesterase family protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
C 00640 Propanoate metabolism [PATH:cat00640]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CA2559_05225 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CA2559_10943 putative oxidoreductase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_00850 Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CA2559_02350 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CA2559_02355 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CA2559_12273 acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CA2559_11343 propionlyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CA2559_03285 Lactoylglutathione lyase and related lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CA2559_07125 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_07140 methylmalonyl-COA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_08536 Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CA2559_08196 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:cat00650]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_05300 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CA2559_09528 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CA2559_06180 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerasefamily protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CA2559_03685 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CA2559_04695 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CA2559_04690 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CA2559_04700 Succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CA2559_08406 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_10478 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_08456 hydroxymethylglutaryl-CoA lyase-like protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CA2559_03105 3-oxoacid CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CA2559_03100 3-oxoadipate CoA-succinyl transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D CA2559_08536 Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CA2559_08196 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism
D CA2559_13483 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cat00190]
D CA2559_08296 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CA2559_04695 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CA2559_04690 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CA2559_04700 Succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CA2559_01175 cytochrome c oxidase assembly factor (CtaA) + protoheme IXfarnesyltransferase (CtaB) K02257 COX10; heme o synthase [EC:2.5.1.141]
D CA2559_01165 probable cytochrome-C oxidase subunit III oxidoreductase protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CA2559_01170 hypothetical protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CA2559_01280 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CA2559_01285 Cytochrome c oxidase, subunit II:Cytochrome c, class I K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CA2559_06105 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CA2559_03060 ATP synthase subunit A K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CA2559_01410 ATP synthase subunit B K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CA2559_03065 H+-transporting two-sector ATPase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CA2559_03055 ATP synthase subunit D K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CA2559_01405 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CA2559_03040 putative ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CA2559_03050 ATP synthase F0, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CA2559_03045 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CA2559_05935 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CA2559_13228 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CA2559_11913 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CA2559_10963 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cat00710]
D CA2559_03315 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CA2559_07856 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_12783 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_05115 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_12268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CA2559_02300 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CA2559_00870 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CA2559_00875 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CA2559_03435 ribose 5-phosphate isomerase B, putative K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CA2559_13483 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CA2559_12473 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CA2559_10763 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CA2559_01655 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CA2559_01220 NADP-dependent malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cat00720]
D CA2559_10083 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CA2559_09838 FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CA2559_04695 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CA2559_04690 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CA2559_04700 Succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CA2559_08196 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CA2559_08536 Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_06770 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CA2559_00945 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CA2559_00850 Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CA2559_02350 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CA2559_02355 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CA2559_12273 acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CA2559_03285 Lactoylglutathione lyase and related lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CA2559_07125 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_07140 methylmalonyl-COA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_05920 putative methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cat00680]
D CA2559_09233 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CA2559_05865 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CA2559_12268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CA2559_02300 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CA2559_11058 putative iron-sulfur-binding reductase K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CA2559_12103 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CA2559_03740 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08686 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08691 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:cat00910]
D CA2559_04585 hydrolase, carbon-nitrogen family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CA2559_02515 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CA2559_07500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CA2559_10408 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cat00920]
D CA2559_06015 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CA2559_06010 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CA2559_13123 CysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CA2559_10698 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CA2559_06005 possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CA2559_11803 5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cat00061]
D CA2559_00850 Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CA2559_02350 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CA2559_02355 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CA2559_12273 acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CA2559_03900 acyl carrier protein K02078 acpP; acyl carrier protein
D CA2559_03870 acyl-carrier protein-like protein K02078 acpP; acyl carrier protein
D CA2559_03150 acyl carrier protein K02078 acpP; acyl carrier protein
D CA2559_10888 acyl carrier protein K02078 acpP; acyl carrier protein
D CA2559_13358 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CA2559_07545 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CA2559_07645 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CA2559_02345 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CA2559_03905 3-oxoacyl-(acyl-carrier-protein) synthase I (beta-ketoacyl-ACPsynthase I) (KAS I) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CA2559_03880 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CA2559_03145 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CA2559_05400 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CA2559_03910 probable 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_08226 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_07435 putative short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_11298 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_03840 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CA2559_10898 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CA2559_08166 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CA2559_09468 putative enoyl-[acyl-carrier-protein] reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CA2559_00985 putative dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CA2559_10903 oxidoreductase, short chain dehydrogenase/reductase family protein K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D CA2559_03705 DesA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D CA2559_06190 probable long chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cat00071]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_06175 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CA2559_06180 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerasefamily protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CA2559_01490 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_04655 Acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_06190 probable long chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cat00561]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_10033 Zinc-containing alcohol dehydrogenase superfamily protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_03500 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CA2559_03710 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CA2559_06245 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:cat00564]
D CA2559_02220 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CA2559_03500 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CA2559_03710 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CA2559_06245 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CA2559_04965 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CA2559_07921 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CA2559_12373 putative phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CA2559_07916 putative phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CA2559_12853 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
D CA2559_07355 linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:cat00592]
D CA2559_06175 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cat01040]
D CA2559_10163 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CA2559_03705 DesA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cat00230]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_04015 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CA2559_03170 putative phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CA2559_02975 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CA2559_03155 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CA2559_06195 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CA2559_13623 putative phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CA2559_05565 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CA2559_05560 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CA2559_08386 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CA2559_06215 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CA2559_00560 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CA2559_13598 Adenine phosphoribosyl transferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CA2559_08461 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CA2559_04835 putative stationary-phase survival acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CA2559_05020 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CA2559_08496 putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CA2559_10693 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CA2559_08816 putative xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CA2559_01005 bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CA2559_02200 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CA2559_02080 probable ribonucleoside-diphosphate reductase large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CA2559_02075 probable ribonucleoside-diphosphate reductase small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CA2559_04135 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CA2559_08776 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CA2559_11908 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CA2559_02800 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CA2559_08766 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CA2559_05950 deoxyguanosine kinase/deoxyadenosine kinase subunit K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D CA2559_05570 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CA2559_06015 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CA2559_06010 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cat00240]
D CA2559_12823 carbamoyl-phosphate synthase, large (or ammonia) subunit (carB) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CA2559_05860 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CA2559_10323 probable aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CA2559_01635 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CA2559_08046 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CA2559_08446 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CA2559_07951 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CA2559_13603 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CA2559_04055 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CA2559_10693 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CA2559_12013 Maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CA2559_08471 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CA2559_10343 putative cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CA2559_07150 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CA2559_08461 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CA2559_04835 putative stationary-phase survival acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CA2559_10958 phosphorylase family protein K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CA2559_10328 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CA2559_00895 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CA2559_05460 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CA2559_02080 probable ribonucleoside-diphosphate reductase large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CA2559_02075 probable ribonucleoside-diphosphate reductase small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CA2559_05950 deoxyguanosine kinase/deoxyadenosine kinase subunit K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D CA2559_04005 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CA2559_03550 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CA2559_02415 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CA2559_13308 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CA2559_04715 Short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cat00250]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_02780 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CA2559_03725 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CA2559_13023 probable asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CA2559_06815 asparagine synthetase B, glutamine-hydrolyzing protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CA2559_01720 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CA2559_10273 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CA2559_08766 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CA2559_06215 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CA2559_10323 probable aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CA2559_08406 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_10478 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_02515 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CA2559_12908 probable delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CA2559_07500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CA2559_12823 carbamoyl-phosphate synthase, large (or ammonia) subunit (carB) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CA2559_05860 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CA2559_09673 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CA2559_01415 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CA2559_03170 putative phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cat00260]
D CA2559_02310 lysine-sensitive aspartokinase III (aspartate kinase III) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CA2559_07425 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CA2559_02400 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CA2559_05990 bifunctional aspartokinase I/homoserine dehydrogenase I K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CA2559_07415 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CA2559_07410 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CA2559_08076 L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CA2559_09233 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CA2559_12103 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CA2559_03740 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08686 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08691 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CA2559_04715 Short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D CA2559_03185 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CA2559_08121 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CA2559_07640 glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CA2559_11173 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_01205 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CA2559_09913 putative D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D CA2559_12373 putative phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CA2559_08106 putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CA2559_00130 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CA2559_10673 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CA2559_08026 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CA2559_06380 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cat00270]
D CA2559_02525 Cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CA2559_09046 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CA2559_08106 putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CA2559_00130 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CA2559_05975 putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CA2559_12553 Cys/Met metabolism lyase (PLP-dependent) K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CA2559_00550 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CA2559_00245 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CA2559_03785 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CA2559_00640 putative D-cysteine desulfhydrase (DcyD) K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CA2559_02310 lysine-sensitive aspartokinase III (aspartate kinase III) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CA2559_07425 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CA2559_02400 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CA2559_05990 bifunctional aspartokinase I/homoserine dehydrogenase I K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CA2559_05980 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CA2559_05235 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_09633 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_07060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_11008 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_08746 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CA2559_10673 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CA2559_03740 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08686 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08691 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cat00280]
D CA2559_05235 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_09633 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_07060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_12928 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D CA2559_05225 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CA2559_10943 putative oxidoreductase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06175 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CA2559_11343 propionlyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CA2559_03285 Lactoylglutathione lyase and related lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CA2559_07125 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_07140 methylmalonyl-COA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_08311 propionyl-CoA carboxylase, beta subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D CA2559_08456 hydroxymethylglutaryl-CoA lyase-like protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CA2559_03105 3-oxoacid CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CA2559_03100 3-oxoadipate CoA-succinyl transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cat00290]
D CA2559_05235 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_09633 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_07060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_12928 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:cat00300]
D CA2559_05990 bifunctional aspartokinase I/homoserine dehydrogenase I K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CA2559_02310 lysine-sensitive aspartokinase III (aspartate kinase III) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CA2559_07425 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CA2559_02400 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CA2559_09438 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CA2559_07100 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CA2559_06150 hypothetical protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CA2559_06750 ornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CA2559_12773 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CA2559_07380 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CA2559_08531 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CA2559_11423 probable diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CA2559_06540 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CA2559_05480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cat00310]
D CA2559_02440 probable piperideine-6-carboxylate dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_02005 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_05240 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_01490 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_04655 Acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_08406 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_10478 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cat00220]
D CA2559_09673 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CA2559_07500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CA2559_12823 carbamoyl-phosphate synthase, large (or ammonia) subunit (carB) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CA2559_05860 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CA2559_02515 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_06750 ornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cat00330]
D CA2559_00525 putative arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CA2559_00520 arginase K01480 speB; agmatinase [EC:3.5.3.11]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_12768 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CA2559_05965 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CA2559_08581 acetylornithine aminotransferase, putative K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CA2559_12663 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CA2559_10548 CpmD protein involved in carbapenem biosynthesis K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D CA2559_12908 probable delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D CA2559_12658 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CA2559_12653 hypothetical protein K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CA2559_12478 proline iminopeptidase, putative K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_09913 putative D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00340 Histidine metabolism [PATH:cat00340]
D CA2559_09016 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CA2559_08976 histidine biosynthesis bifunctional protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CA2559_08986 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide(ProFAR) isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CA2559_08991 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CA2559_08981 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CA2559_08996 imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CA2559_09006 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CA2559_09011 putative histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CA2559_03915 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CA2559_11158 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CA2559_00595 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CA2559_09041 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CA2559_09036 Formiminoglutamate hydrolase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_13323 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:cat00350]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_09006 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CA2559_02600 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CA2559_02595 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CA2559_09238 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CA2559_04970 decarboxylase, pyridoxal-dependent K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CA2559_08406 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_10478 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:cat00360]
D CA2559_05350 phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase) K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CA2559_04970 decarboxylase, pyridoxal-dependent K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CA2559_03810 coenzyme F390 synthetase-like protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CA2559_05295 hypothetical protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CA2559_05335 phenylacetic acid degradation protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D CA2559_05330 Phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D CA2559_05320 Phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D CA2559_05315 putative phenylacetic acid degradation protein K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D CA2559_05340 phenylacetate-CoA oxygenase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CA2559_03005 Phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D CA2559_05310 enoyl-CoA hydratase/isomerase PhaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CA2559_05275 aldehyde dehydrogenase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D CA2559_05300 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CA2559_09528 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_09006 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CA2559_02600 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CA2559_10808 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D CA2559_05965 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CA2559_06565 Alpha/beta hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:cat00380]
D CA2559_02610 tryptophan 2,3-dioxygenase family protein K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D CA2559_11953 esterase/lipase/thioesterase family protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CA2559_07400 hypothetical protein K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D CA2559_07761 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D CA2559_02445 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D CA2559_07440 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D CA2559_07430 hypothetical protein K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D CA2559_07405 Endoribonuclease L-PSP K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_02005 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_05240 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_01490 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_04655 Acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_04970 decarboxylase, pyridoxal-dependent K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_04585 hydrolase, carbon-nitrogen family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CA2559_05965 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CA2559_11433 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D CA2559_10808 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cat00400]
D CA2559_10553 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CA2559_11973 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CA2559_00900 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CA2559_07746 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CA2559_11018 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CA2559_06405 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CA2559_06400 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CA2559_06395 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CA2559_06385 putative N-(5'-phosphoribosyl) anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CA2559_06390 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CA2559_08026 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CA2559_06380 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CA2559_07385 putative chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D CA2559_07375 putative prefrenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_09006 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CA2559_05350 phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase) K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cat00410]
D CA2559_01435 aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_01430 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cat00430]
D CA2559_08826 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CA2559_10273 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D CA2559_09578 hydrolase, metal-dependent K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:cat00450]
D CA2559_02525 Cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CA2559_09046 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CA2559_12553 Cys/Met metabolism lyase (PLP-dependent) K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CA2559_04465 selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CA2559_00750 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CA2559_11253 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CA2559_06015 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CA2559_06010 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CA2559_04125 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cat00460]
D CA2559_04585 hydrolase, carbon-nitrogen family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CA2559_08826 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CA2559_02780 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CA2559_03725 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CA2559_09233 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cat00470]
D CA2559_02410 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CA2559_07996 D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CA2559_09673 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CA2559_04380 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CA2559_06530 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CA2559_12773 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CA2559_08531 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CA2559_11423 probable diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CA2559_09913 putative D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00480 Glutathione metabolism [PATH:cat00480]
D CA2559_08826 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CA2559_08921 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CA2559_08931 Allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D CA2559_11008 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CA2559_10463 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CA2559_12668 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CA2559_02575 regulatory protein K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CA2559_06770 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CA2559_08716 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis [PATH:cat00540]
D CA2559_08171 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CA2559_08166 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CA2559_08161 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CA2559_08186 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CA2559_02835 putative UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CA2559_04825 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CA2559_07846 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CA2559_12348 Sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CA2559_00190 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CA2559_09803 putative lipopolysaccharide biosynthesis-related protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CA2559_13378 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CA2559_13223 putative lipd A biosynthesis related exported protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CA2559_07595 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D CA2559_06145 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CA2559_02935 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cat00541]
D CA2559_03925 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CA2559_13173 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CA2559_03545 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13103 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13118 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_02955 NAD-dependent epimerase/dehydratase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_13113 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CA2559_13108 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CA2559_12883 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CA2559_08836 putative phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CA2559_05435 putative mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CA2559_02910 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CA2559_02915 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CA2559_13098 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CA2559_13093 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CA2559_13073 capsular polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CA2559_13043 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CA2559_13063 putative NeuA K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CA2559_13083 UDP-glucose/GDP-mannose dehydrogenase family protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D CA2559_13373 pigmentation and extracellular proteinase regulator K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CA2559_13088 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:cat00550]
D CA2559_09593 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CA2559_07886 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CA2559_06515 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CA2559_06530 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CA2559_06540 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CA2559_07996 D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CA2559_05480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CA2559_04320 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CA2559_04545 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_07455 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_09156 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_06535 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CA2559_06520 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CA2559_02365 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CA2559_03455 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CA2559_00580 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CA2559_06545 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cat00552]
D CA2559_04545 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_07455 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_09156 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cat00543]
D CA2559_02950 Glycosyl transferase, group 1 K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D CA2559_02945 putative acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D CA2559_07240 xanthan biosynthesis pyruvyltransferase GumL K13665 gumL; pyruvyltransferase
D CA2559_07265 xanthan biosynthesis pyruvyltransferase GumL K13665 gumL; pyruvyltransferase
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cat00730]
D CA2559_10848 probable phosphomethylpyrimidine kinase (ThiD) K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CA2559_08616 iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CA2559_00745 hypothetical protein K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CA2559_04150 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CA2559_10863 probable hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CA2559_10858 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CA2559_04400 putative thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CA2559_07390 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CA2559_05570 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CA2559_10853 putative transcriptional activator (TenA family) K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cat00740]
D CA2559_06265 putative riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CA2559_12713 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CA2559_09783 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CA2559_02325 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CA2559_04030 Riboflavin kinase / FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CA2559_10863 probable hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:cat00750]
D CA2559_11923 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CA2559_08691 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CA2559_04340 putative pyridoxine biosynthesis protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CA2559_07410 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cat00760]
D CA2559_08421 putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CA2559_05020 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CA2559_08461 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CA2559_04835 putative stationary-phase survival acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CA2559_02205 nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CA2559_06585 NH(3)-dependent NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CA2559_08031 hypothetical protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CA2559_04330 ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CA2559_08406 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CA2559_10478 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cat00770]
D CA2559_10683 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CA2559_01430 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CA2559_04225 putative transcription regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CA2559_09453 flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CA2559_07991 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CA2559_09488 putative dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CA2559_03790 siderophore (surfactin) biosynthesis regulatory protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CA2559_08831 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D CA2559_05235 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_09633 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_07060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_01435 aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cat00780]
D CA2559_03905 3-oxoacyl-(acyl-carrier-protein) synthase I (beta-ketoacyl-ACPsynthase I) (KAS I) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CA2559_03880 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CA2559_03145 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CA2559_05400 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CA2559_03910 probable 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_08226 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_07435 putative short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_11298 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_03840 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CA2559_10898 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CA2559_09468 putative enoyl-[acyl-carrier-protein] reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CA2559_05380 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CA2559_05395 Adenosylmethionine-8-Amino-7-Oxononanoate Aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CA2559_05390 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CA2559_02695 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CA2559_07941 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cat00785]
D CA2559_05530 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CA2559_07861 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_05455 pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CA2559_13273 dihydrolipoamide acetyltransferase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CA2559_05450 Dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CA2559_02000 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_02005 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_05240 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CA2559_05225 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CA2559_10943 putative oxidoreductase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D CA2559_07640 glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CA2559_11173 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CA2559_01205 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cat00790]
D CA2559_08636 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CA2559_00785 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CA2559_05495 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CA2559_03415 FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CA2559_13508 putative dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CA2559_13348 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CA2559_06680 putative folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CA2559_06265 putative riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CA2559_09868 para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CA2559_13633 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CA2559_02840 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CA2559_11183 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CA2559_05350 phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase) K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CA2559_06800 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:cat00670]
D CA2559_13348 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CA2559_05920 putative methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CA2559_09233 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CA2559_03155 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CA2559_00560 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CA2559_09618 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CA2559_11173 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CA2559_13308 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CA2559_02470 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cat00860]
D CA2559_03370 putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CA2559_03645 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CA2559_00650 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CA2559_03605 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CA2559_03640 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CA2559_01650 possible uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CA2559_03635 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CA2559_03630 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CA2559_03615 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CA2559_03675 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CA2559_03660 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CA2559_01175 cytochrome c oxidase assembly factor (CtaA) + protoheme IXfarnesyltransferase (CtaB) K02257 COX10; heme o synthase [EC:2.5.1.141]
D CA2559_06105 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CA2559_09091 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CA2559_08801 magnesium protoporphyrin chelatase, putative K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cat00130]
D CA2559_12248 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CA2559_09908 possible isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CA2559_11118 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acidsynthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CA2559_11263 chloromuconate cycloisomerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CA2559_08306 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CA2559_10533 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CA2559_09903 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CA2559_11273 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CA2559_04035 gamma-glutamyl carboxylase-like protein K10106 GGCX; vitamin K-dependent gamma-carboxylase [EC:4.1.1.90]
D CA2559_02600 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cat00900]
D CA2559_04150 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_04185 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D CA2559_04600 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D CA2559_04605 hypothetical protein K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D CA2559_13638 putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CA2559_01980 putative isoprenoid biosynthesis related protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CA2559_05420 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CA2559_04320 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CA2559_08781 CAAX prenyl protease 1, putative K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cat00906]
D CA2559_00920 phytoene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CA2559_00915 CrtI1 K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D CA2559_00930 putative lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D CA2559_00925 beta carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:cat00907]
D CA2559_08456 hydroxymethylglutaryl-CoA lyase-like protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CA2559_06175 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CA2559_00870 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CA2559_00875 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D CA2559_01180 Zn-dependent hydrolase, glyoxylase family protein K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cat00523]
D CA2559_03545 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13103 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13118 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_02955 NAD-dependent epimerase/dehydratase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_13113 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CA2559_13108 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CA2559_09908 possible isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CA2559_13118 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_02955 NAD-dependent epimerase/dehydratase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:cat00311]
D CA2559_09913 putative D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D CA2559_09313 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cat00332]
D CA2559_12658 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CA2559_12653 hypothetical protein K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cat00261]
D CA2559_06015 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CA2559_06010 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CA2559_02310 lysine-sensitive aspartokinase III (aspartate kinase III) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CA2559_07425 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D CA2559_02400 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CA2559_09438 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CA2559_07100 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cat00521]
D CA2559_11243 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CA2559_03545 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13103 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13118 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_02955 NAD-dependent epimerase/dehydratase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_13113 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CA2559_13108 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:cat00525]
D CA2559_03545 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13103 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CA2559_13118 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CA2559_02955 NAD-dependent epimerase/dehydratase family protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cat00401]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_09006 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CA2559_06405 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CA2559_06400 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CA2559_13358 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CA2559_03910 probable 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_08226 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_07435 putative short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_11298 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_09468 putative enoyl-[acyl-carrier-protein] reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:cat00998]
D CA2559_03900 acyl carrier protein K02078 acpP; acyl carrier protein
D CA2559_03870 acyl-carrier protein-like protein K02078 acpP; acyl carrier protein
D CA2559_03150 acyl carrier protein K02078 acpP; acyl carrier protein
D CA2559_10888 acyl carrier protein K02078 acpP; acyl carrier protein
D CA2559_11413 putative cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites
D CA2559_05975 putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CA2559_11413 putative cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cat00362]
D CA2559_06175 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CA2559_05285 acetyl-CoA acetyltransferase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D CA2559_07430 hypothetical protein K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D CA2559_06180 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerasefamily protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CA2559_01490 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_04655 Acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CA2559_05300 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CA2559_09528 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cat00627]
D CA2559_05965 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CA2559_04585 hydrolase, carbon-nitrogen family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cat00625]
D CA2559_08936 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CA2559_10473 Cryptic haloacid dehalogenase 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CA2559_10473 Cryptic haloacid dehalogenase 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D CA2559_07430 hypothetical protein K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation [PATH:cat00633]
D CA2559_10483 flavoprotein NADH-dependent oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D CA2559_06175 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:cat00643]
D CA2559_02595 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CA2559_09238 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CA2559_05965 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CA2559_04585 hydrolase, carbon-nitrogen family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cat03020]
D CA2559_00025 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CA2559_00020 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CA2559_05850 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cat03010]
D CA2559_10333 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CA2559_04075 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CA2559_05745 putative 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CA2559_05845 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CA2559_05805 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CA2559_09978 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CA2559_05700 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CA2559_05790 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CA2559_04080 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CA2559_05710 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CA2559_05840 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CA2559_05695 putative 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CA2559_05835 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CA2559_05785 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CA2559_12283 putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CA2559_04640 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CA2559_05760 putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CA2559_09983 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CA2559_05735 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CA2559_01050 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CA2559_00075 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CA2559_00040 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CA2559_05730 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CA2559_05715 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CA2559_05720 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CA2559_05780 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CA2559_05795 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CA2559_00030 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CA2559_09988 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CA2559_00035 putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CA2559_00045 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CA2559_04085 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CA2559_05770 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CA2559_05815 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CA2559_05750 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CA2559_05855 putative 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CA2559_05800 RplR K02881 RP-L18; large subunit ribosomal protein L18
D CA2559_06780 putative 50S ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19
D CA2559_00830 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CA2559_02720 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CA2559_05740 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CA2559_05725 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CA2559_05775 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CA2559_04020 putative ribosomal L25p family stress protein K02897 RP-L25; large subunit ribosomal protein L25
D CA2559_02725 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CA2559_13563 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CA2559_05755 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CA2559_05810 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CA2559_11228 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CA2559_02340 50S ribosomal protein L32 (Ribosomal protein I) K02911 RP-L32; large subunit ribosomal protein L32
D CA2559_13558 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CA2559_12828 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D CA2559_00825 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CA2559_05830 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CA2559_r07731 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CA2559_r13674 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CA2559_r13675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CA2559_r07732 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cat00970]
D CA2559_t07699 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CA2559_t13664 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CA2559_t07685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CA2559_t13666 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CA2559_t07703 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CA2559_t13672 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CA2559_t07709 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CA2559_t07691 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CA2559_t07687 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CA2559_t07683 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CA2559_t07717 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CA2559_t07719 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CA2559_t07693 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CA2559_t07725 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CA2559_t13674 tRNA-His K14226 tRNA-His; tRNA His
D CA2559_t07697 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CA2559_t13662 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CA2559_t07707 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07681 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07705 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07677 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CA2559_t07679 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CA2559_t13660 tRNA-Met K14230 tRNA-Met; tRNA Met
D CA2559_t07715 tRNA-Met K14230 tRNA-Met; tRNA Met
D CA2559_t07711 tRNA-Met K14230 tRNA-Met; tRNA Met
D CA2559_t07689 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CA2559_t13670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CA2559_t13668 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CA2559_t09173 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CA2559_t07713 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CA2559_t07727 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CA2559_t07721 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CA2559_t07729 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CA2559_t07723 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CA2559_t07701 tRNA-Val K14237 tRNA-Val; tRNA Val
D CA2559_03370 putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CA2559_03410 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CA2559_04755 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CA2559_01940 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CA2559_02730 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CA2559_01740 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CA2559_00815 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CA2559_03775 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CA2559_00790 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CA2559_04125 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CA2559_09618 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CA2559_07906 putative valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CA2559_04530 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CA2559_02490 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CA2559_05510 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CA2559_05910 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CA2559_01055 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CA2559_10378 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CA2559_02245 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CA2559_08821 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CA2559_01620 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CA2559_03505 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cat03060]
D CA2559_05820 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D CA2559_00055 elongation factor Tu K03073 secE; preprotein translocase subunit SecE
D CA2559_00680 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CA2559_08751 putative protein-export transmembrane SecDF protein K12257 secDF; SecD/SecF fusion protein
D CA2559_12913 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CA2559_08476 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CA2559_09101 translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CA2559_05915 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CA2559_13548 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CA2559_07460 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D CA2559_02885 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CA2559_12353 putative Sec-independent protein translocase component K03118 tatC; sec-independent protein translocase protein TatC
D CA2559_07095 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CA2559_02475 putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cat04122]
D CA2559_08616 iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CA2559_00980 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cat03018]
D CA2559_05865 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CA2559_12288 putative polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CA2559_05215 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CA2559_09853 ATP-dependent RNA helicase, DEAD/DEAH box family protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CA2559_03430 putative exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CA2559_08811 ATP-dependent RNA helicase, DEAD/DEAH box family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CA2559_09353 ATP-dependent RNA helicase, DEAD/DEAH box family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CA2559_12343 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_09613 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_01900 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_01045 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CA2559_06705 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CA2559_07165 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CA2559_00670 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CA2559_11913 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CA2559_10963 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CA2559_06110 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cat03030]
D CA2559_13583 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09513 probable DNA-directed DNA polymerase III (epsilon subunit) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_04615 putative DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CA2559_11893 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CA2559_03320 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CA2559_11278 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CA2559_12563 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CA2559_00845 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CA2559_06600 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CA2559_01895 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02665 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_03160 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CA2559_05540 putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CA2559_02590 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CA2559_09423 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cat03410]
D CA2559_09263 endonuclease III/Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CA2559_10973 putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CA2559_02670 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CA2559_04565 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CA2559_01760 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CA2559_02590 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CA2559_02825 single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CA2559_09423 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cat03420]
D CA2559_02560 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CA2559_09248 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CA2559_10878 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CA2559_06080 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CA2559_04670 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CA2559_10008 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CA2559_02590 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CA2559_09423 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cat03430]
D CA2559_05155 putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CA2559_10978 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CA2559_07070 putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D CA2559_10008 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CA2559_02825 single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CA2559_01895 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02665 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_04615 putative DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CA2559_12563 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CA2559_11893 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CA2559_11278 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CA2559_03320 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CA2559_13583 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09513 probable DNA-directed DNA polymerase III (epsilon subunit) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09423 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cat03440]
D CA2559_02825 single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CA2559_01895 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02665 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_09773 putative DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D CA2559_02500 possible DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CA2559_07580 recombination protein RecR K06187 recR; recombination protein RecR
D CA2559_03480 RecA K03553 recA; recombination protein RecA
D CA2559_02590 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CA2559_01215 Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D CA2559_01270 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CA2559_04920 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CA2559_10468 ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CA2559_04615 putative DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CA2559_12563 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CA2559_11893 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CA2559_11278 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CA2559_03320 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CA2559_13583 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09513 probable DNA-directed DNA polymerase III (epsilon subunit) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09963 primosomal protein N' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cat03250]
D CA2559_07190 probable peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_09298 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cat02010]
D CA2559_11078 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CA2559_07665 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CA2559_07670 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CA2559_02035 zinc ABC transporter, periplasmic zinc-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CA2559_02045 zinc ABC transporter, permease protein K11708 troC; manganese/zinc/iron transport system permease protein
D CA2559_02050 zinc ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D CA2559_02040 zinc ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CA2559_07235 ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CA2559_07245 ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CA2559_03295 putative lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D CA2559_00135 ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D CA2559_08621 lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CA2559_06260 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D CA2559_00860 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D CA2559_12363 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CA2559_03390 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CA2559_04535 putative cell division protein K09811 ftsX; cell division transport system permease protein
D CA2559_00170 putative ATP-binding protein involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D CA2559_11248 ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CA2559_12933 ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CA2559_13518 ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:cat03070]
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D CA2559_08751 putative protein-export transmembrane SecDF protein K12257 secDF; SecD/SecF fusion protein
D CA2559_00055 elongation factor Tu K03073 secE; preprotein translocase subunit SecE
D CA2559_00680 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CA2559_05820 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D CA2559_12913 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CA2559_08476 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CA2559_09101 translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CA2559_13548 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CA2559_05915 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CA2559_07460 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D CA2559_02885 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CA2559_12353 putative Sec-independent protein translocase component K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cat02020]
D CA2559_09493 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_01805 PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_03280 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_01810 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CA2559_05495 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CA2559_12778 serine protease precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D CA2559_11703 putative cation efflux system transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D CA2559_11358 putative metal transport-related, exported protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D CA2559_11383 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D CA2559_11758 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D CA2559_06105 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CA2559_12738 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CA2559_11948 probable peptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D CA2559_01685 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CA2559_01470 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CA2559_08901 putative nitrate/nitrite DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D CA2559_12543 Transcriptional regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D CA2559_07500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CA2559_01515 rteB, two-component system response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CA2559_13448 two component, sigma54 specific, transcriptional regulator, Fis family protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_02740 RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D CA2559_12648 Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CA2559_09673 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D CA2559_10728 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CA2559_07225 polysaccharide export protein, BexD/CtrA/VexA family protein K01991 wza; polysaccharide biosynthesis/export protein
D CA2559_12743 Protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CA2559_10723 putative EPS related membrane protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CA2559_07230 putative tyrosine-protein kinase in cps region K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CA2559_13098 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CA2559_13093 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CA2559_02280 sensory box sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cat02024]
D CA2559_06405 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CA2559_06400 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CA2559_04445 AttM/AiiB family protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D CA2559_00775 iron-regulated protein FrpC K20276 bapA; large repetitive protein
D CA2559_06190 probable long chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CA2559_12713 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CA2559_10058 putative outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CA2559_09061 oligopeptide/dipeptide ABC transporter, peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CA2559_13493 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CA2559_04845 oligopeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CA2559_03560 ABC-type dipeptide transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CA2559_08476 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CA2559_08751 putative protein-export transmembrane SecDF protein K12257 secDF; SecD/SecF fusion protein
D CA2559_00055 elongation factor Tu K03073 secE; preprotein translocase subunit SecE
D CA2559_00680 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CA2559_05820 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D CA2559_12913 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CA2559_09101 translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CA2559_13548 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CA2559_05915 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cat02030]
D CA2559_12648 Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CA2559_12418 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_01765 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_11308 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cat02040]
D CA2559_12418 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_01765 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_11308 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_12468 RNA polymerase sigma factor rpoD (Sigma-A) K03086 rpoD; RNA polymerase primary sigma factor
D CA2559_11323 putative sigma factor A K03086 rpoD; RNA polymerase primary sigma factor
D CA2559_02740 RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CA2559_05865 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cat04980]
D CA2559_09091 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CA2559_09151 arginine/ornithine transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D CA2559_07125 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CA2559_07140 methylmalonyl-COA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cat01501]
D CA2559_11048 putative hydrolase/beta lactamase fusion protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CA2559_07465 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CA2559_07981 TonB K02172 blaR1; bla regulator protein blaR1
D CA2559_07781 conserved hypothetical transmembrane protein K02172 blaR1; bla regulator protein blaR1
D CA2559_07470 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07786 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07976 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_09313 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CA2559_10068 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D CA2559_10058 putative outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D CA2559_03455 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CA2559_00580 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CA2559_06545 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cat01502]
D CA2559_11948 probable peptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D CA2559_07996 D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CA2559_02410 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CA2559_05480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CA2559_06535 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CA2559_06520 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cat01503]
D CA2559_03210 lipoprotein K06079 cutF; copper homeostasis protein (lipoprotein)
D CA2559_11083 putative exported N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CA2559_12778 serine protease precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D CA2559_07190 probable peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_09298 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_10068 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D CA2559_08171 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cat01000]
C 01001 Protein kinases [BR:cat01001]
D CA2559_10723 putative EPS related membrane protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CA2559_07230 putative tyrosine-protein kinase in cps region K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CA2559_09493 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_01805 PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_03280 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_01685 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CA2559_04905 putative two-component system sensor but no kinase domain K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CA2559_11998 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CA2559_13453 sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CA2559_02280 sensory box sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cat01009]
D CA2559_03785 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CA2559_07530 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:cat01002]
D CA2559_02475 putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CA2559_10538 hypothetical protein K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D CA2559_01005 bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CA2559_11858 dipeptidyl peptidase VI K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D CA2559_04820 hypothetical protein K13695 nlpC; probable lipoprotein NlpC
D CA2559_03170 putative phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CA2559_01415 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CA2559_13023 probable asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CA2559_06815 asparagine synthetase B, glutamine-hydrolyzing protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CA2559_10413 proteinase K05520 yhbO; deglycase [EC:3.5.1.124]
D CA2559_08301 hypothetical protein K07052 K07052; CAAX protease family protein
D CA2559_09056 hypothetical protein K07052 K07052; CAAX protease family protein
D CA2559_10668 hypothetical protein K07052 K07052; CAAX protease family protein
D CA2559_10463 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CA2559_05555 peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CA2559_09051 thermolysin K01400 nprE; bacillolysin [EC:3.4.24.28]
D CA2559_03930 Peptidase, M13 family (lipoprotein) K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CA2559_11948 probable peptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D CA2559_02700 putative metallopeptidase, M16 family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CA2559_02705 putative protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D CA2559_02710 Peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CA2559_11333 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CA2559_08441 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CA2559_12668 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CA2559_01485 peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CA2559_12113 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CA2559_04710 probable X-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CA2559_07020 leucyl aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D CA2559_02230 metalloprotease, putative K01417 MEP; extracellular elastinolytic metalloproteinase [EC:3.4.24.-]
D CA2559_04140 metalloprotease, putative K01417 MEP; extracellular elastinolytic metalloproteinase [EC:3.4.24.-]
D CA2559_07931 putative transmembrane AAA-metalloprotease FtsH K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D CA2559_08781 CAAX prenyl protease 1, putative K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CA2559_07015 putative dipeptidyl-peptidase III K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D CA2559_03975 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CA2559_07465 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CA2559_07981 TonB K02172 blaR1; bla regulator protein blaR1
D CA2559_07781 conserved hypothetical transmembrane protein K02172 blaR1; bla regulator protein blaR1
D CA2559_12488 hypothetical protein K09933 mtfA; MtfA peptidase
D CA2559_12778 serine protease precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D CA2559_03235 Serine protease/subtilase K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D CA2559_02385 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CA2559_04800 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CA2559_08101 Peptidase S9, prolyl oligopeptidase active site region K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CA2559_04370 ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CA2559_09663 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CA2559_07600 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D CA2559_09893 ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CA2559_10663 SOS-response transcriptional repressors (RecA-mediatedautopeptidase)-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CA2559_07095 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CA2559_12478 proline iminopeptidase, putative K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CA2559_04000 putative carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CA2559_03110 carboxy-terminal processing protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CA2559_04840 probable periplasmic tail-specific proteinase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CA2559_09693 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CA2559_09678 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D CA2559_07075 rhomboid family protein K07059 K07059; rhomboid family protein
D CA2559_07080 putative transmembrane rhomboid family protein K07059 K07059; rhomboid family protein
D CA2559_04130 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CA2559_03725 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CA2559_08826 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:cat01003]
D CA2559_01640 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CA2559_10838 putative glycosyltransferase K00752 hasA; hyaluronan synthase [EC:2.4.1.212]
D CA2559_01425 putative glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CA2559_02365 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CA2559_03455 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CA2559_05415 conserved membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cat01005]
D CA2559_08171 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CA2559_04825 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CA2559_08166 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CA2559_08161 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CA2559_08186 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CA2559_02835 putative UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CA2559_07846 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CA2559_13223 putative lipd A biosynthesis related exported protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CA2559_07595 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D CA2559_13378 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CA2559_06270 polysaccharide biosynthesis protein K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109]
D CA2559_10583 ethanolamine utilization protein-like protein K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48]
D CA2559_00190 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CA2559_09803 putative lipopolysaccharide biosynthesis-related protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CA2559_12348 Sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CA2559_06145 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CA2559_02935 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cat01011]
D CA2559_09593 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CA2559_07886 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CA2559_06515 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CA2559_06530 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CA2559_06540 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CA2559_07996 D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CA2559_02410 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CA2559_04380 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CA2559_04130 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CA2559_06535 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CA2559_06520 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CA2559_04545 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_07455 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_09156 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CA2559_03455 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CA2559_00580 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CA2559_06545 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CA2559_02365 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CA2559_11948 probable peptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D CA2559_01485 peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CA2559_03310 Peptidoglycan-binding LysM K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CA2559_12858 putative membrane-bound lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CA2559_12763 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CA2559_11083 putative exported N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cat01004]
D CA2559_13358 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CA2559_07545 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CA2559_07645 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CA2559_02345 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CA2559_03905 3-oxoacyl-(acyl-carrier-protein) synthase I (beta-ketoacyl-ACPsynthase I) (KAS I) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CA2559_03880 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CA2559_03145 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CA2559_05400 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CA2559_03910 probable 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_08226 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_07435 putative short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_11298 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CA2559_03840 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CA2559_10898 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CA2559_08166 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D CA2559_09468 putative enoyl-[acyl-carrier-protein] reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CA2559_00985 putative dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CA2559_10903 oxidoreductase, short chain dehydrogenase/reductase family protein K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D CA2559_10163 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CA2559_03705 DesA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D CA2559_07355 linoleoyl-CoA desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D CA2559_03255 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CA2559_06190 probable long chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CA2559_03500 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CA2559_03710 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cat01008]
D CA2559_01180 Zn-dependent hydrolase, glyoxylase family protein K05555 actIV; cyclase [EC:4.-.-.-]
D CA2559_10908 naringenin-chalcone synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
C 01006 Prenyltransferases [BR:cat01006]
D CA2559_01980 putative isoprenoid biosynthesis related protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CA2559_05420 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CA2559_04320 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CA2559_00920 phytoene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CA2559_09503 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CA2559_11273 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CA2559_01175 cytochrome c oxidase assembly factor (CtaA) + protoheme IXfarnesyltransferase (CtaB) K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:cat01007]
D CA2559_03370 putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CA2559_03410 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CA2559_01620 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CA2559_03505 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CA2559_00790 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CA2559_05910 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CA2559_04125 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CA2559_02490 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CA2559_07906 putative valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CA2559_04530 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CA2559_05510 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CA2559_01940 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CA2559_02730 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CA2559_10378 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CA2559_01740 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CA2559_03775 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CA2559_01055 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CA2559_00815 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CA2559_04755 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CA2559_02245 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CA2559_08821 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CA2559_07350 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_07891 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CA2559_04720 putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D CA2559_07380 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CA2559_09006 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CA2559_03185 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CA2559_08121 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CA2559_05380 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CA2559_08581 acetylornithine aminotransferase, putative K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CA2559_06750 ornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CA2559_05395 Adenosylmethionine-8-Amino-7-Oxononanoate Aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CA2559_00650 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CA2559_05235 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_09633 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_07060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CA2559_08691 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CA2559_13373 pigmentation and extracellular proteinase regulator K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cat00194]
D CA2559_01405 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CA2559_01410 ATP synthase subunit B K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CA2559_03065 H+-transporting two-sector ATPase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CA2559_03060 ATP synthase subunit A K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CA2559_03055 ATP synthase subunit D K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CA2559_03050 ATP synthase F0, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CA2559_03045 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CA2559_03040 putative ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cat03000]
D CA2559_00245 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CA2559_07776 putative AraC family transcriptional regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CA2559_01850 probable transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CA2559_08961 transcriptional regulator, LysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CA2559_01255 putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CA2559_05070 putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CA2559_11478 transcriptional regulator, GntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CA2559_12083 transcriptional regulator, TetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CA2559_05345 transcriptional regulator, tetR family protein K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D CA2559_01670 putative AsnC family regulatory protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CA2559_10428 transcriptional regulator of asparagine biosynthesis (AsnC family) K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CA2559_06945 probable transcription regulator protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CA2559_12558 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CA2559_05245 putative AsnC-family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D CA2559_06415 transcriptional regulator marR family protein K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D CA2559_06185 transcriptional regulator, marR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CA2559_00910 transcriptional regulator, MerR family protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D CA2559_08771 putative iron storage-related regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CA2559_11678 putative transcription regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CA2559_12618 transcriptional regulator, Crp family protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CA2559_11833 transcriptional regulator, Crp family protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CA2559_00475 transcriptional regulator, ArsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CA2559_12303 hypothetical protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D CA2559_09563 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D CA2559_02025 putative transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CA2559_07470 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07786 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07976 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07941 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CA2559_05360 transcriptional regulator, Cro/CI family protein K07727 K07727; putative transcriptional regulator
D CA2559_12593 repressor protein K07729 K07729; putative transcriptional regulator
D CA2559_07110 putative ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CA2559_10853 putative transcriptional activator (TenA family) K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CA2559_13443 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D CA2559_10328 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CA2559_00895 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CA2559_05600 Negative transcriptional regulator K07734 paiB; transcriptional regulator
D CA2559_09628 putative transcriptional regulator K07735 algH; putative transcriptional regulator
D CA2559_02485 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D CA2559_06560 hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cat03021]
D CA2559_05850 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CA2559_00025 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CA2559_00020 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CA2559_12468 RNA polymerase sigma factor rpoD (Sigma-A) K03086 rpoD; RNA polymerase primary sigma factor
D CA2559_11323 putative sigma factor A K03086 rpoD; RNA polymerase primary sigma factor
D CA2559_10283 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CA2559_08291 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CA2559_12208 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CA2559_06615 putative RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CA2559_07866 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CA2559_02740 RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D CA2559_01340 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CA2559_12923 putative N utilization substance protein K03625 nusB; transcription antitermination protein NusB
D CA2559_00050 putative transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CA2559_02485 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D CA2559_01495 putative transcription elongation factor K03624 greA; transcription elongation factor GreA
D CA2559_01045 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cat03019]
D CA2559_02680 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CA2559_03140 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CA2559_06705 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CA2559_03430 putative exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CA2559_05215 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CA2559_09853 ATP-dependent RNA helicase, DEAD/DEAH box family protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CA2559_08811 ATP-dependent RNA helicase, DEAD/DEAH box family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CA2559_09353 ATP-dependent RNA helicase, DEAD/DEAH box family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CA2559_12343 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_09613 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_01900 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_05865 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CA2559_12288 putative polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CA2559_01045 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CA2559_05110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CA2559_07165 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CA2559_00670 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CA2559_11913 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CA2559_10963 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CA2559_06110 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:cat03011]
D CA2559_10333 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CA2559_04075 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CA2559_05745 putative 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CA2559_05845 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CA2559_05805 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CA2559_09978 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CA2559_05700 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CA2559_05790 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CA2559_04080 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CA2559_05710 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CA2559_05840 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CA2559_05695 putative 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CA2559_05835 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CA2559_05785 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CA2559_12283 putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CA2559_04640 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CA2559_05760 putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CA2559_09983 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CA2559_05735 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CA2559_01050 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CA2559_00075 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CA2559_00040 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CA2559_05730 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CA2559_05715 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CA2559_05720 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CA2559_05780 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CA2559_05795 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CA2559_09988 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CA2559_00035 putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CA2559_00045 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CA2559_00030 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CA2559_04085 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CA2559_05770 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CA2559_05815 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CA2559_05750 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CA2559_05855 putative 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CA2559_05800 RplR K02881 RP-L18; large subunit ribosomal protein L18
D CA2559_06780 putative 50S ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19
D CA2559_00830 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CA2559_02720 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CA2559_05740 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CA2559_05725 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CA2559_05775 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CA2559_02725 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CA2559_13563 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CA2559_05755 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CA2559_05810 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CA2559_11228 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CA2559_02340 50S ribosomal protein L32 (Ribosomal protein I) K02911 RP-L32; large subunit ribosomal protein L32
D CA2559_13558 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CA2559_12828 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D CA2559_00825 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CA2559_05830 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CA2559_04020 putative ribosomal L25p family stress protein K02897 RP-L25; large subunit ribosomal protein L25
D CA2559_r07731 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CA2559_r13674 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CA2559_r13675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CA2559_r07732 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cat03009]
D CA2559_03140 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CA2559_01555 putative GTP-binding protein K03595 era; GTPase
D CA2559_05575 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CA2559_02485 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D CA2559_01340 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CA2559_12923 putative N utilization substance protein K03625 nusB; transcription antitermination protein NusB
D CA2559_00050 putative transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CA2559_03760 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CA2559_10303 putative sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CA2559_10608 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CA2559_13143 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CA2559_07365 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CA2559_06555 S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CA2559_12753 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CA2559_02430 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CA2559_05650 putative tRNA:rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CA2559_05145 putative SpoU rRNA methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CA2559_13158 SpoU rRNA methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CA2559_10393 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D CA2559_08411 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CA2559_11313 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CA2559_08561 putative N6-adenine-specific DNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D CA2559_07736 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CA2559_08576 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CA2559_00765 putative ribosomal large subunit pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CA2559_08006 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CA2559_10688 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CA2559_02735 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CA2559_10398 RNA pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CA2559_13243 pseudouridine synthase, Rsu K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CA2559_02460 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D CA2559_04645 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D CA2559_13538 putative Fe-S oxidoreductase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CA2559_13478 putative ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CA2559_02680 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CA2559_06155 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CA2559_10148 ATP-independent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D CA2559_08811 ATP-dependent RNA helicase, DEAD/DEAH box family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CA2559_09353 ATP-dependent RNA helicase, DEAD/DEAH box family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CA2559_07390 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CA2559_04795 GTP-binding protein EngA K03977 engA; GTPase
D CA2559_04515 GTP-binding protein HflX K03665 hflX; GTPase
D CA2559_06115 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CA2559_08776 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CA2559_03290 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CA2559_01345 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CA2559_07936 hypothetical protein K09710 ybeB; ribosome-associated protein
D CA2559_03360 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CA2559_00065 putative sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D CA2559_10503 site-specific recombinase, phage integrase family/ribosomal subunitinterface protein K05809 raiA; ribosome-associated inhibitor A
D CA2559_09848 putative ATP/GTP-binding protein K06942 ychF; ribosome-binding ATPase
D CA2559_02335 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cat03016]
D CA2559_10313 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CA2559_03370 putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CA2559_01055 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CA2559_02490 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CA2559_04530 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CA2559_04125 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CA2559_03410 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CA2559_05910 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CA2559_05510 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CA2559_01940 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CA2559_04755 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CA2559_02730 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CA2559_01740 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CA2559_00815 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CA2559_03775 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CA2559_00790 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CA2559_07906 putative valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CA2559_10378 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CA2559_02245 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CA2559_08821 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CA2559_01620 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CA2559_03505 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CA2559_07395 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CA2559_01700 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CA2559_01795 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CA2559_13523 putative tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CA2559_10623 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CA2559_04550 putative tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CA2559_08616 iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CA2559_06115 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CA2559_09503 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CA2559_12578 putative tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CA2559_03355 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CA2559_13123 CysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CA2559_03125 possible ribonuclease P component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CA2559_08326 putative ATP-binding component of ABC transporter K06020 ettA; energy-dependent translational throttle protein EttA
D CA2559_04155 putative cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CA2559_03215 putative TIM-barrel enzyme, possible dehydrogenase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CA2559_00700 putative SAM/TRAM family methylase protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CA2559_09066 putative Fe-S oxidoreductase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CA2559_12703 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CA2559_11883 spoU protein (spoU) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D CA2559_04650 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CA2559_12258 putative tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CA2559_08786 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D CA2559_00980 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CA2559_04435 Scaffold protein for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D CA2559_11898 putative hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D CA2559_09818 tRNA (ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D CA2559_07741 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CA2559_13633 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CA2559_02840 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CA2559_06800 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CA2559_01260 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CA2559_00865 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CA2559_09873 putative cell-cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CA2559_01100 putative glycoprotease family exported protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CA2559_13138 putative glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CA2559_10268 putative ATP/GTP-binding transmembrane protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CA2559_03430 putative exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CA2559_12288 putative polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cat03012]
D CA2559_10953 putative translation initiation factor K03113 EIF1; translation initiation factor 1
D CA2559_01335 putative translation initiation factor K02519 infB; translation initiation factor IF-2
D CA2559_00820 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CA2559_01715 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CA2559_04070 elongation factor Ts K02357 tsf; elongation factor Ts
D CA2559_00060 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CA2559_05705 elongation factor EF-2 K02355 fusA; elongation factor G
D CA2559_13608 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CA2559_04050 ribosome recycling factor K02838 frr; ribosome recycling factor
D CA2559_09408 putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CA2559_04025 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CA2559_05825 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CA2559_08176 translation elongation factor P K02356 efp; elongation factor P
D CA2559_09203 putative peptide chain release factor K02836 prfB; peptide chain release factor 2
D CA2559_00010 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CA2559_01530 peptidyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:cat03110]
D CA2559_09888 putative heat shock ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CA2559_11148 ATP-dependent Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CA2559_04375 ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CA2559_07530 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CA2559_07165 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CA2559_00670 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CA2559_08256 chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D CA2559_03720 DnaJ domain containing protein K05801 djlA; DnaJ like chaperone protein
D CA2559_08251 GrpE protein (Hsp-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D CA2559_06090 small heat shock protein K13993 HSP20; HSP20 family protein
D CA2559_00885 heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CA2559_00675 co-chaperonin GroES K04078 groES; chaperonin GroES
D CA2559_12778 serine protease precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D CA2559_07931 putative transmembrane AAA-metalloprotease FtsH K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D CA2559_03040 putative ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CA2559_05490 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D CA2559_03235 Serine protease/subtilase K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D CA2559_07190 probable peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_09298 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_04195 peptidyl-prolyl cis-trans isomerase, PpiC-type K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CA2559_00955 putative exported peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CA2559_00965 peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CA2559_04950 thioredoxin K03671 TXN; thioredoxin
D CA2559_01370 thioredoxin C-2 K03671 TXN; thioredoxin
D CA2559_06230 thioredoxin K03671 TXN; thioredoxin
D CA2559_01245 hypothetical protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:cat04131]
D CA2559_10693 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CA2559_07856 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_12783 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_05115 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_03130 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CA2559_07530 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CA2559_12428 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cat03051]
D CA2559_07530 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cat03032]
D CA2559_03160 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CA2559_00245 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CA2559_09623 probable DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CA2559_02675 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CA2559_12738 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CA2559_00845 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CA2559_06600 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CA2559_01895 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02665 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_04615 putative DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CA2559_12563 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CA2559_11278 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CA2559_03320 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CA2559_13583 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09513 probable DNA-directed DNA polymerase III (epsilon subunit) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_11893 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CA2559_05540 putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CA2559_02590 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CA2559_09423 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CA2559_11138 DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CA2559_06825 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CA2559_09723 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CA2559_09718 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CA2559_00715 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CA2559_09733 putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cat03036]
D CA2559_00245 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CA2559_03140 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CA2559_09623 probable DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CA2559_02675 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CA2559_12738 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CA2559_13178 DPS family protein K04047 dps; starvation-inducible DNA-binding protein
D CA2559_06945 probable transcription regulator protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CA2559_12558 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CA2559_06505 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CA2559_00170 putative ATP-binding protein involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D CA2559_06545 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CA2559_06250 putative FtsK/SpoIIIE-like protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CA2559_06510 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CA2559_06525 putative transmembrane rod-shape determining protein K03588 ftsW; cell division protein FtsW
D CA2559_04535 putative cell division protein K09811 ftsX; cell division transport system permease protein
D CA2559_06500 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CA2559_06700 hypothetical protein K09888 zapA; cell division protein ZapA
D CA2559_11083 putative exported N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CA2559_10068 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D CA2559_00565 putative rod-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CA2559_00570 rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D CA2559_00585 putative transmembrane rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D CA2559_07115 SpoOJ regulator protein K03496 parA; chromosome partitioning protein
D CA2559_07110 putative ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CA2559_09723 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CA2559_09718 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CA2559_03355 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CA2559_07365 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CA2559_00070 putative site-specific recombinase K03733 xerC; integrase/recombinase XerC
D CA2559_11988 putative tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D CA2559_00230 putative tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D CA2559_03935 integrase K04763 xerD; integrase/recombinase XerD
D CA2559_00760 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CA2559_06570 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cat03400]
D CA2559_03590 methylated-DNA--protein-cysteine s-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CA2559_11303 deoxyribodipyrimidine photolyase-class I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CA2559_10973 putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CA2559_02670 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CA2559_09263 endonuclease III/Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CA2559_07475 putative S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D CA2559_03600 probable 8-oxo-dGTPase, MutT-like protein, NUDIX hydrolase family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CA2559_03550 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CA2559_07801 deoxyribodipyrimidine photolyase related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D CA2559_04565 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CA2559_01760 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CA2559_02825 single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CA2559_09423 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CA2559_02590 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CA2559_09248 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CA2559_10878 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CA2559_06080 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CA2559_04670 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CA2559_10008 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CA2559_00025 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CA2559_00020 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CA2559_05850 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CA2559_02560 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CA2559_05155 putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CA2559_10978 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CA2559_07070 putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D CA2559_04615 putative DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CA2559_12563 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CA2559_11278 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CA2559_03320 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CA2559_13583 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_09513 probable DNA-directed DNA polymerase III (epsilon subunit) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CA2559_11893 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CA2559_01895 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02665 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02370 DNA mismatch endonuclease Vsr, putative K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D CA2559_03480 RecA K03553 recA; recombination protein RecA
D CA2559_01215 Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D CA2559_01270 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CA2559_04920 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CA2559_09963 primosomal protein N' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CA2559_01480 putative DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D CA2559_09773 putative DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D CA2559_10468 ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CA2559_02500 possible DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CA2559_07580 recombination protein RecR K06187 recR; recombination protein RecR
D CA2559_09463 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CA2559_06795 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CA2559_11138 DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CA2559_06825 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CA2559_00715 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CA2559_09733 putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CA2559_09623 probable DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CA2559_02675 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CA2559_12343 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_09613 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_01900 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CA2559_02810 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CA2559_10658 putative RumB/ImpB like DNA repair protein K03502 umuC; DNA polymerase V
D CA2559_10663 SOS-response transcriptional repressors (RecA-mediatedautopeptidase)-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CA2559_02685 putative transcriptional regulatory protein K03565 recX; regulatory protein
D CA2559_02265 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CA2559_02080 probable ribonucleoside-diphosphate reductase large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CA2559_02075 probable ribonucleoside-diphosphate reductase small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CA2559_10698 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cat03029]
D CA2559_01335 putative translation initiation factor K02519 infB; translation initiation factor IF-2
D CA2559_00820 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CA2559_04070 elongation factor Ts K02357 tsf; elongation factor Ts
D CA2559_00060 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CA2559_05705 elongation factor EF-2 K02355 fusA; elongation factor G
D CA2559_01555 putative GTP-binding protein K03595 era; GTPase
D CA2559_01620 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CA2559_04530 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CA2559_01940 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CA2559_01740 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CA2559_05910 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CA2559_00505 hypothetical protein K23499 RMND1; required for meiotic nuclear division protein 1
D CA2559_08316 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CA2559_00665 putative endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CA2559_01895 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_02665 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CA2559_04315 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CA2559_07165 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CA2559_08251 GrpE protein (Hsp-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D CA2559_00670 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CA2559_00675 co-chaperonin GroES K04078 groES; chaperonin GroES
D CA2559_08256 chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D CA2559_08616 iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CA2559_01705 Ferredoxin K22071 FDX2; ferredoxin-2, mitochondrial
D CA2559_01075 NifU-like domain protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D CA2559_00760 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CA2559_01175 cytochrome c oxidase assembly factor (CtaA) + protoheme IXfarnesyltransferase (CtaB) K02257 COX10; heme o synthase [EC:2.5.1.141]
D CA2559_06105 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CA2559_08476 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CA2559_03980 YpmQ K07152 SCO1; protein SCO1
D CA2559_01150 YpmQ K07152 SCO1; protein SCO1
D CA2559_08236 hypothetical protein K17080 PHB1; prohibitin 1
D CA2559_07530 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cat02000]
D CA2559_11248 ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CA2559_12933 ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CA2559_13518 ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CA2559_07215 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CA2559_11078 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CA2559_07665 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CA2559_07670 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CA2559_09061 oligopeptide/dipeptide ABC transporter, peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CA2559_13493 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CA2559_04845 oligopeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CA2559_03560 ABC-type dipeptide transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CA2559_12513 periplasmic-binding protein of ABC transporter K25034 btuF; cobalamin transport system substrate-binding protein
D CA2559_12518 iron(III) ABC transporter, permease protein, putative K25027 btuC; cobalamin transport system permease protein
D CA2559_12803 iron(III) ABC transporter, ATP-binding protein, putative K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CA2559_02035 zinc ABC transporter, periplasmic zinc-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CA2559_02045 zinc ABC transporter, permease protein K11708 troC; manganese/zinc/iron transport system permease protein
D CA2559_02050 zinc ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D CA2559_02040 zinc ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CA2559_07235 ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CA2559_07245 ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CA2559_06260 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D CA2559_00860 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D CA2559_12363 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CA2559_03390 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CA2559_08366 ABC transporter, permease protein K25151 gldF; gliding motility-associated transport system permease protein
D CA2559_07370 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D CA2559_08361 GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D CA2559_03295 putative lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D CA2559_00135 ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D CA2559_08621 lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CA2559_04535 putative cell division protein K09811 ftsX; cell division transport system permease protein
D CA2559_00170 putative ATP-binding protein involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D CA2559_08266 ABC transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D CA2559_00470 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CA2559_06060 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CA2559_03015 putative ATP-binding component of ABC transporter protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CA2559_08261 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CA2559_10373 ABC transporter efflux protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CA2559_00555 ABC transporter efflux protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CA2559_01125 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D CA2559_01130 putative ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D CA2559_12888 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CA2559_01135 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CA2559_04455 ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CA2559_09173 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CA2559_02855 putative membrane protein K26937 dinF; MATE family, multidrug efflux pump
D CA2559_03665 C-5 cytosine-specific DNA methylase:Multi antimicrobial extrusion (MatE) protein K26937 dinF; MATE family, multidrug efflux pump
D CA2559_08721 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CA2559_11473 putative hexuronate transport protein (MFS family) K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D CA2559_10238 bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CA2559_07155 hypothetical protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D CA2559_12428 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
D CA2559_09508 potassium channel protein K10716 kch; voltage-gated potassium channel
D CA2559_00100 potassium channel protein K10716 kch; voltage-gated potassium channel
D CA2559_06675 ammonium transporter K03320 amt; ammonium transporter, Amt family
D CA2559_02145 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CA2559_02150 aerotolerance-related membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D CA2559_02135 aerotolerance-related exported protein K07114 yfbK; Ca-activated chloride channel homolog
D CA2559_08796 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CA2559_02405 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CA2559_09728 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CA2559_13183 putative mechanosensitive channel protein (MscS family) K03442 mscS; small conductance mechanosensitive channel
D CA2559_01095 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D CA2559_00500 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D CA2559_10253 hypothetical protein K03442 mscS; small conductance mechanosensitive channel
D CA2559_10263 putative transmembrane transport protein K16053 ybdG; miniconductance mechanosensitive channel
D CA2559_03755 magnesium transporter K06213 mgtE; magnesium transporter
D CA2559_12418 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_01765 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_11308 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_02770 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CA2559_06640 putative biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D CA2559_06645 putative tansport related protein K03559 exbD; biopolymer transport protein ExbD
D CA2559_10618 Magnesium and cobalt transport protein K03284 corA; magnesium transporter
D CA2559_06970 hypothetical protein K06199 crcB; fluoride exporter
D CA2559_11673 probable copper-transporting ATPase K08363 merT; mercuric ion transport protein
D CA2559_02660 putative transmembrane CorC/HlyC family transporter associatedprotein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CA2559_04200 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CA2559_03595 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CA2559_03195 Thrombospondin type 3 repeat:OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CA2559_08396 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CA2559_08086 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CA2559_04350 outer membrane protein P1, putative K06076 fadL; long-chain fatty acid transport protein
D CA2559_08506 outer membrane receptor protein K16091 fecA; Fe(3+) dicitrate transport protein
D CA2559_12508 putative TonB-dependent outer membrane receptor K16092 btuB; vitamin B12 transporter
D CA2559_05065 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CA2559_05680 putative surface membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CA2559_11498 putative outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D CA2559_02495 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D CA2559_01505 putative TonB-dependent transmembrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CA2559_01565 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CA2559_12568 probable TonB-dependent receptor YncD precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CA2559_08651 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CA2559_07040 ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CA2559_11443 ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CA2559_11378 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CA2559_11753 metal ion efflux outer membrane protein family protein, putative K15725 czcC; outer membrane protein, heavy metal efflux system
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D CA2559_10058 putative outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CA2559_10728 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D CA2559_07225 polysaccharide export protein, BexD/CtrA/VexA family protein K01991 wza; polysaccharide biosynthesis/export protein
D CA2559_04315 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CA2559_09443 lipoprotein protein, putative K05807 bamD; outer membrane protein assembly factor BamD
D CA2559_06760 outer membrane protein K21449 ata; trimeric autotransporter adhesin
D CA2559_10753 putative membrane-anchored cell surface protein K21449 ata; trimeric autotransporter adhesin
D CA2559_05075 putative sugar transporter K16211 malY; maltose/moltooligosaccharide transporter
D CA2559_01240 sugar transporter K16211 malY; maltose/moltooligosaccharide transporter
D CA2559_11693 cation efflux system protein, AcrB/AcrD/AcrF family protein K15726 czcA; heavy metal efflux system protein
D CA2559_11383 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D CA2559_11758 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D CA2559_01960 multidrug resistance protein, putative K18989 vexF; multidrug efflux pump
D CA2559_10818 putative chaperone/membrane protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CA2559_07505 sodium/calcium exchanger K07301 yrbG; cation:H+ antiporter
D CA2559_13458 putative Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D CA2559_05370 NA(+)/H(+) antiporter 1 K03313 nhaA; Na+:H+ antiporter, NhaA family
D CA2559_12548 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CA2559_10218 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D CA2559_10213 probable NADP(H) oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D CA2559_12238 putative potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D CA2559_12243 putative potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D CA2559_02105 permease protein of sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D CA2559_12953 Sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D CA2559_08916 Mn2+/Fe2+ transporter, NRAMP family protein K03322 mntH; manganese transport protein
D CA2559_00490 Arsenical-resistance protein K03325 ACR3; arsenite transporter
D CA2559_04850 hypothetical protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CA2559_04860 Conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter
D CA2559_08146 multiple antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D CA2559_02065 putative transmembrane protein K05595 marC; multiple antibiotic resistance protein
D CA2559_06525 putative transmembrane rod-shape determining protein K03588 ftsW; cell division protein FtsW
D CA2559_00220 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D CA2559_01195 TonB K03832 tonB; periplasmic protein TonB
D CA2559_01190 TonB K03832 tonB; periplasmic protein TonB
D CA2559_06650 hypothetical protein K03832 tonB; periplasmic protein TonB
D CA2559_05940 Inorganic H+ pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CA2559_06450 putative lipoprotein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CA2559_11688 cation efflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CA2559_11703 putative cation efflux system transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D CA2559_11358 putative metal transport-related, exported protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D CA2559_10068 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D CA2559_01965 Secretion protein HlyD K18990 vexE; membrane fusion protein, multidrug efflux system
D CA2559_10723 putative EPS related membrane protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CA2559_07230 putative tyrosine-protein kinase in cps region K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CA2559_11493 putative outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CA2559_05675 putative membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CA2559_01950 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CA2559_05060 putative membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D CA2559_01545 putative membrane transporter involved in nicotinamidemononucleotide transport K03811 pnuC; nicotinamide mononucleotide transporter
D CA2559_03985 probable ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CA2559_03990 ferrous iron transport protein B-like protein K04759 feoB; ferrous iron transport protein B
D CA2559_04610 integral membrane protein K05770 TSPO; translocator protein
D CA2559_05375 Mg(2+) transport protein C, mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cat02044]
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D CA2559_00090 hypothetical protein K02237 comEA; competence protein ComEA
D CA2559_04005 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CA2559_04815 competence protein K02238 comEC; competence protein ComEC
D CA2559_09101 translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CA2559_08751 putative protein-export transmembrane SecDF protein K12257 secDF; SecD/SecF fusion protein
D CA2559_00055 elongation factor Tu K03073 secE; preprotein translocase subunit SecE
D CA2559_00680 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CA2559_05820 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D CA2559_05915 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CA2559_13548 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CA2559_12913 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CA2559_08476 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CA2559_07460 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D CA2559_02885 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CA2559_12353 putative Sec-independent protein translocase component K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cat02042]
D CA2559_02660 putative transmembrane CorC/HlyC family transporter associatedprotein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CA2559_04200 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CA2559_03595 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cat02022]
D CA2559_09493 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_01805 PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_03280 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CA2559_01810 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CA2559_01470 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CA2559_08901 putative nitrate/nitrite DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D CA2559_12543 Transcriptional regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D CA2559_01685 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CA2559_04905 putative two-component system sensor but no kinase domain K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CA2559_11998 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CA2559_01905 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_08681 transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_11553 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_12408 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_09968 two-component system response regulator protein K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_11558 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_04910 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CA2559_01515 rteB, two-component system response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CA2559_13448 two component, sigma54 specific, transcriptional regulator, Fis family protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D CA2559_13453 sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CA2559_12648 Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CA2559_02280 sensory box sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cat02035]
D CA2559_12648 Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D CA2559_12418 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_01765 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CA2559_11308 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cat04812]
D CA2559_00565 putative rod-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CA2559_06500 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CA2559_06505 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CA2559_07115 SpoOJ regulator protein K03496 parA; chromosome partitioning protein
D CA2559_07110 putative ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cat04147]
D CA2559_07530 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CA2559_05865 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CA2559_07856 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_12783 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_05115 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CA2559_03315 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CA2559_03130 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CA2559_07190 probable peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_09298 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CA2559_11333 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CA2559_06225 putative thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CA2559_08236 hypothetical protein K17080 PHB1; prohibitin 1
D CA2559_00670 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CA2559_07165 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CA2559_05125 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CA2559_04800 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CA2559_08496 putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CA2559_00060 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CA2559_01700 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CA2559_06190 probable long chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CA2559_11853 probable acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CA2559_03785 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CA2559_05570 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CA2559_13598 Adenine phosphoribosyl transferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CA2559_04970 decarboxylase, pyridoxal-dependent K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D CA2559_09238 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CA2559_02300 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CA2559_07500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CA2559_03605 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CA2559_02600 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CA2559_11183 pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CA2559_03740 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_08686 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CA2559_00560 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CA2559_08781 CAAX prenyl protease 1, putative K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CA2559_11288 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CA2559_12463 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_06220 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CA2559_13283 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CA2559_13483 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cat02048]
D CA2559_04295 Type II restriction enzyme, methylase subunit K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CA2559_02830 type II DNA modification enzyme (methyltransferase) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CA2559_00245 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CA2559_06885 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D CA2559_06880 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D CA2559_06500 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CA2559_00565 putative rod-shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CA2559_09723 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CA2559_09718 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CA2559_03370 putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CA2559_08616 iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cat04090]
D CA2559_04800 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:cat01504]
D CA2559_01855 MCBG-like protein (microcin resistance protein) K18555 qnr; fluoroquinolone resistance protein
D CA2559_07465 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CA2559_07981 TonB K02172 blaR1; bla regulator protein blaR1
D CA2559_07781 conserved hypothetical transmembrane protein K02172 blaR1; bla regulator protein blaR1
D CA2559_07470 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07786 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_07976 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CA2559_09313 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CA2559_11948 probable peptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D CA2559_10068 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D CA2559_10058 putative outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D CA2559_01115 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D CA2559_01590 putative outer membrane protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cat00537]
D CA2559_11333 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cat03100]
D CA2559_t07699 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CA2559_t13664 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CA2559_t07685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CA2559_t13666 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CA2559_t07703 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CA2559_t13672 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CA2559_t07709 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CA2559_t07691 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CA2559_t07687 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CA2559_t07683 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CA2559_t07717 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CA2559_t07719 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CA2559_t07693 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CA2559_t07725 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CA2559_t13674 tRNA-His K14226 tRNA-His; tRNA His
D CA2559_t07697 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CA2559_t13662 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CA2559_t07707 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07681 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07705 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CA2559_t07677 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CA2559_t07679 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CA2559_t13660 tRNA-Met K14230 tRNA-Met; tRNA Met
D CA2559_t07715 tRNA-Met K14230 tRNA-Met; tRNA Met
D CA2559_t07711 tRNA-Met K14230 tRNA-Met; tRNA Met
D CA2559_t07689 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CA2559_t13670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CA2559_t13668 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CA2559_t09173 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CA2559_t07713 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CA2559_t07727 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CA2559_t07721 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CA2559_t07729 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CA2559_t07723 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CA2559_t07701 tRNA-Val K14237 tRNA-Val; tRNA Val
D CA2559_r07731 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CA2559_r13674 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CA2559_r13675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CA2559_r07732 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CA2559_12328 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D CA2559_03330 hypothetical protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CA2559_10198 ripening-induced protein-putative Zn-containing oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CA2559_11258 YfmJ K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D CA2559_12483 thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D CA2559_07826 hypothetical protein K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CA2559_08631 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CA2559_13613 putative peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CA2559_12448 putative methionine sulfoxide reductase, SelR K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CA2559_12453 SelR-like methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CA2559_04385 Di-heme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CA2559_04430 probable cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CA2559_09198 methylamine utilization protein/Cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CA2559_06665 probable cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CA2559_12958 arylesterase (aryl-ester hydrolase) K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D CA2559_12323 bacterioferritin comigratory protein, thiol peroxidase, putative K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CA2559_06240 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CA2559_09146 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CA2559_09076 possible Pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CA2559_09213 probable arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CA2559_02535 hypothetical protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CA2559_00485 probable arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CA2559_09538 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CA2559_00890 hypothetical protein K21552 HOL; methyl halide transferase [EC:2.1.1.165]
D CA2559_09418 protease synthase and sporulation negative regulatory protein pai 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D CA2559_12383 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CA2559_12708 putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D CA2559_10783 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CA2559_04580 leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CA2559_11043 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CA2559_00515 hypothetical protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D CA2559_06045 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CA2559_12123 thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CA2559_13513 putative transmembrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CA2559_10743 putative undecaprenyl-phosphate glycosyl-1-phosphate transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D CA2559_03885 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CA2559_12733 Predicted esterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CA2559_03750 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CA2559_01695 Predicted thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CA2559_02175 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CA2559_10718 capsular polysaccharide biosynthesis protein, putative K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CA2559_11918 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CA2559_11848 putative transmembrane HD family protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CA2559_02785 Sec-independent protein translocase protein TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CA2559_04345 alpha/beta superfamily hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D CA2559_05090 putative alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D CA2559_01875 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CA2559_06160 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CA2559_01375 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CA2559_03855 polysaccharide deacetylase, putative K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CA2559_12528 hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D CA2559_11098 putative translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CA2559_00950 methanol dehydrogenase regulator-like protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CA2559_02165 putative magnesium chelatase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CA2559_09798 magnesium chelatase, subunit I, putative ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CA2559_11168 putative YjeF-related sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CA2559_11508 putative chondroitin AC/alginate lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D CA2559_06870 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D CA2559_05595 L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CA2559_12163 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D CA2559_12158 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D CA2559_12153 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D CA2559_12148 NADH-ubiquinone oxidoreductase K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D CA2559_12143 NADH:ubiquinone oxidoreductase, Na translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D CA2559_12138 NADH:ubiquinone oxidoreductase, Na translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D CA2559_00260 putative copper transport-related membrane protein K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CA2559_11668 cation-transporting ATPase, P-type, putative zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CA2559_01015 hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D CA2559_13278 electron transfer flavoprotein (beta subunit) K03521 fixA; electron transfer flavoprotein beta subunit
D CA2559_01085 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CA2559_03620 hypothetical protein K06203 cysZ; CysZ protein
D CA2559_09518 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CA2559_01440 putative transmembrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D CA2559_12193 hypothetical protein K22390 ACP7; acid phosphatase type 7
D CA2559_01610 hypothetical protein K15977 K15977; putative oxidoreductase
D CA2559_11793 hypothetical protein K15977 K15977; putative oxidoreductase
D CA2559_02395 hypothetical protein K15977 K15977; putative oxidoreductase
D CA2559_02390 hypothetical protein K15977 K15977; putative oxidoreductase
D CA2559_08036 hypothetical protein K06999 K06999; phospholipase/carboxylesterase
D CA2559_03715 hypothetical protein K26958 brxA_B; bacilliredoxin
D CA2559_12903 hypothetical Cytosolic Protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CA2559_08241 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D CA2559_12963 cold shock protein, putative DNA-binding protein K03704 cspA; cold shock protein
C 99974 Translation
D CA2559_02275 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D CA2559_04470 hypothetical protein K03668 hslJ; heat shock protein HslJ
D CA2559_13473 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CA2559_04365 putative cell division trigger factor K03545 tig; trigger factor
D CA2559_09086 SsrA-binding protein K03664 smpB; SsrA-binding protein
D CA2559_08906 magnesium chelatase subunit ChlI K07391 comM; magnesium chelatase family protein
D CA2559_02845 Oxidoreductase K07394 K07394; SM-20-related protein
C 99976 Replication and repair
D CA2559_01785 6-O-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CA2559_05605 putative DNA repair protein K03630 radC; DNA repair protein RadC
D CA2559_12808 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CA2559_02085 hypothetical protein K07460 yraN; putative endonuclease
D CA2559_05230 hypothetical protein K07461 K07461; putative endonuclease
D CA2559_05250 endo/excinuclease amino terminal domain protein K07461 K07461; putative endonuclease
D CA2559_05260 endo/excinuclease amino terminal domain protein K07461 K07461; putative endonuclease
D CA2559_05270 hypothetical protein K07461 K07461; putative endonuclease
D CA2559_09001 hypothetical protein K07461 K07461; putative endonuclease
D CA2559_03515 Smf protein DNA processing chain A K04096 smf; DNA processing protein
D CA2559_05640 putative ATPase, AAA family protein K07478 ycaJ; putative ATPase
D CA2559_03580 polysaccharide biosynthesis protein K07501 K07501; 3'-5' exonuclease
D CA2559_00385 ISPsy11, transposase OrfB K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CA2559_08096 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D CA2559_07806 probable bacterial cryptochrome K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CA2559_10063 putative AcrB/AcrD family RND transport protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CA2559_09318 hypothetical protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D CA2559_04805 proton/peptide symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CA2559_04175 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CA2559_07575 putative transmembrane sodium-solute transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CA2559_13128 sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CA2559_00095 putative Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CA2559_06955 Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CA2559_04390 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CA2559_13293 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D CA2559_08926 hypothetical protein K06351 kipI; inhibitor of KinA
D CA2559_03530 putative peptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D CA2559_00185 GTP-binding elongation factor family protein TypA/BipA K06207 typA; GTP-binding protein
D CA2559_08381 putative phosphate starvation-inducible PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D CA2559_08486 cationic outer membrane protein OmpH K06142 hlpA; outer membrane protein
D CA2559_03345 hypothetical protein K06142 hlpA; outer membrane protein
D CA2559_05165 hypothetical protein K06142 hlpA; outer membrane protein
D CA2559_04305 putative outer membrane protein K06142 hlpA; outer membrane protein
D CA2559_01120 membrane fusion efflux protein K02005 ABC.CD.TX; HlyD family secretion protein
D CA2559_05055 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F
D CA2559_05050 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D CA2559_12178 hypothetical protein K06195 apaG; ApaG protein
D CA2559_02550 potassium transporter (Trk family) K07222 K07222; putative flavoprotein involved in K+ transport
D CA2559_02190 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CA2559_02100 hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D CA2559_03440 probable acetyltransferase YybD K02348 elaA; ElaA protein
D CA2559_05255 phenylacetic acid degradation protein K02617 paaY; phenylacetic acid degradation protein
D CA2559_07205 CsaA protein K06878 K06878; tRNA-binding protein
D CA2559_01780 putative patatin-like phospholipase K07001 K07001; NTE family protein
D CA2559_05620 putative haloacid dehalogenase-like hydrolase protein K07025 K07025; putative hydrolase of the HAD superfamily
D CA2559_04440 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D CA2559_04460 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CA2559_04870 hypothetical protein K07038 K07038; inner membrane protein
D CA2559_10418 hypothetical protein K07058 K07058; membrane protein
D CA2559_08426 Ribonuclease BN K07058 K07058; membrane protein
D CA2559_04475 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D CA2559_03470 hypothetical protein K07146 K07146; UPF0176 protein
D CA2559_04770 hypothetical protein K03744 lemA; LemA protein
D CA2559_06205 hypothetical protein K03748 sanA; SanA protein
D CA2559_00125 putative membrane protein K00389 yidH; putative membrane protein
D CA2559_04360 hypothetical protein K08972 K08972; putative membrane protein
D CA2559_06740 integral membrane protein K08974 K08974; putative membrane protein
D CA2559_06735 Predicted membrane protein K08974 K08974; putative membrane protein
D CA2559_01145 YozB K08976 K08976; putative membrane protein
D CA2559_04990 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CA2559_07000 Ankyrin-like protein K06867 K06867; uncharacterized protein
D CA2559_04780 hypothetical protein K06872 K06872; uncharacterized protein
D CA2559_08156 hypothetical protein K06885 K06885; uncharacterized protein
D CA2559_01090 hypothetical protein K06888 K06888; uncharacterized protein
D CA2559_07480 hypothetical protein K06889 K06889; uncharacterized protein
D CA2559_01560 alpha/beta hydrolase superfamily protein K06889 K06889; uncharacterized protein
D CA2559_03205 Alpha/beta superfamily hydrolase K06889 K06889; uncharacterized protein
D CA2559_11638 abortive infection protein, putative K06926 K06926; uncharacterized protein
D CA2559_09358 hypothetical protein K06940 K06940; uncharacterized protein
D CA2559_03700 metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D CA2559_02260 hypothetical protein K06953 K06953; uncharacterized protein
D CA2559_04520 hypothetical protein K06973 K06973; uncharacterized protein
D CA2559_09658 Acetyltransferase K06975 K06975; uncharacterized protein
D CA2559_08881 Alpha-amino acid ester hydrolase K06978 K06978; uncharacterized protein
D CA2559_02465 hypothetical protein K06987 K06987; uncharacterized protein
D CA2559_13253 Glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D CA2559_04040 hypothetical protein K07003 K07003; uncharacterized protein
D CA2559_03830 hypothetical membrane protein K07003 K07003; uncharacterized protein
D CA2559_10078 hypothetical protein K07013 K07013; uncharacterized protein
D CA2559_05290 predicted metalloprotease K07054 K07054; uncharacterized protein
D CA2559_08971 possible epimerase, NAD dependent epimerase family protein K07071 K07071; uncharacterized protein
D CA2559_11728 Uncharacterized conserved membrane protein, probable transporter K07089 K07089; uncharacterized protein
D CA2559_12623 membrane protein, putative K07090 K07090; uncharacterized protein
D CA2559_11828 membrane protein, putative K07090 K07090; uncharacterized protein
D CA2559_09193 hypothetical protein K07093 K07093; uncharacterized protein
D CA2559_13528 hypothetical protein K07095 K07095; uncharacterized protein
D CA2559_01365 putative membrane protein K07098 K07098; uncharacterized protein
D CA2559_11773 hypothetical protein K07112 K07112; uncharacterized protein
D CA2559_11778 hypothetical protein K07112 K07112; uncharacterized protein
D CA2559_12633 hypothetical protein K07112 K07112; uncharacterized protein
D CA2559_12638 hypothetical protein K07112 K07112; uncharacterized protein
D CA2559_12613 Uncharacterized FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D CA2559_07836 hypothetical protein K07164 K07164; uncharacterized protein
D CA2559_00795 hypothetical protein K08998 K08998; uncharacterized protein
D CA2559_13288 hypothetical protein K08999 K08999; uncharacterized protein
D CA2559_06040 hypothetical protein K09005 K09005; uncharacterized protein
D CA2559_06495 YqeY family protein K09117 K09117; uncharacterized protein
D CA2559_06965 hypothetical protein K09164 K09164; uncharacterized protein
D CA2559_02795 hypothetical protein K09780 K09780; uncharacterized protein
D CA2559_10868 hypothetical protein K09797 K09797; uncharacterized protein
D CA2559_13213 hypothetical protein K09807 K09807; uncharacterized protein
D CA2559_11108 hypothetical protein K00243 K00243; uncharacterized protein
D CA2559_08011 hypothetical protein K09861 K09861; uncharacterized protein
D CA2559_06805 hypothetical protein K09924 K09924; uncharacterized protein
D CA2559_05025 hypothetical protein K09931 K09931; uncharacterized protein
D CA2559_04160 hypothetical protein K09931 K09931; uncharacterized protein
D CA2559_12573 tRNA modification GTPase K09940 K09940; uncharacterized protein
D CA2559_08081 hypothetical protein K09946 K09946; uncharacterized protein
D CA2559_08466 hypothetical protein K09954 K09954; uncharacterized protein
D CA2559_12003 hypothetical protein K09977 K09977; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024