+F Repair protein KO
#
DNA Repair and Recombination Proteins - Corylus avellana (European hazelnut)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 132171476 DNA oxidative demethylase ALKBH2 isoform X1 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 132173542 DExH-box ATP-dependent RNA helicase DExH14 isoform X1 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 132175085 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 132177707 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 132162208 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 132171036 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 132184874 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 132165841 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 132173848 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 132170889 DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 132165772 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 132191920 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 132175142 LOW QUALITY PROTEIN: uncharacterized protein LOC132175142 K03504 POLD3; DNA polymerase delta subunit 3
F 132167061 uncharacterized protein LOC132167061 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 132163250 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 132185936 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 132164137 DNA polymerase II subunit B4 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 132163747 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 132164086 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 132186564 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 132186571 uncharacterized protein LOC132186571 K04802 PCNA; proliferating cell nuclear antigen
E 132187694 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 132163569 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 132186427 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 132170633 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 132191376 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 132174699 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 132179367 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 132166357 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 132164644 protein ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 132170828 poly [ADP-ribose] polymerase 2-A K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 132181308 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 132187731 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 132180637 ubiquitin receptor RAD23c K10839 RAD23; UV excision repair protein RAD23
F 132184134 ubiquitin receptor RAD23c-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 132166206 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 132166306 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 132170272 cullin-4 K10609 CUL4; cullin 4
F 132170216 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 132164764 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 132166489 uncharacterized protein LOC132166489 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 132166721 uncharacterized protein LOC132166721 K15082 RAD7; DNA repair protein RAD7
F 132181471 ATP-dependent helicase rhp16-like isoform X1 K15083 RAD16; DNA repair protein RAD16
F 132181473 ATP-dependent helicase rhp16-like isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 132172426 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 132172137 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 132179803 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 132166128 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 132171147 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 132175509 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 132176208 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 132187717 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 132191705 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 132188661 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 132181224 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 132181323 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 132174482 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 132161775 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 132187438 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 132165329 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 132167967 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 132190086 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 132166320 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 132167142 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F 132166206 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 132166306 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 132170272 cullin-4 K10609 CUL4; cullin 4
F 132170216 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 132190380 WD repeat-containing protein ATCSA-1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 132165668 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 132186898 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 132175850 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 132171237 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 132175721 general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 132168752 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 132174788 general transcription and DNA repair factor IIH subunit TFB1-1-like K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 132174988 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 132182542 general transcription and DNA repair factor IIH subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 132169858 general transcription and DNA repair factor IIH subunit TFB2-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 132171373 general transcription and DNA repair factor IIH subunit TFB2-like isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 132171374 general transcription and DNA repair factor IIH subunit TFB2-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 132172227 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 132171741 cyclin-H1-1 K06634 CCNH; cyclin H
E 132184577 uncharacterized protein LOC132184577 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 132165585 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 132173840 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 132175262 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 132189834 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 132190458 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 132161621 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 132175341 replication protein A 14 kDa subunit B-like isoform X1 K10740 RPA3; replication factor A3
E 132175385 replication protein A 14 kDa subunit A-like K10740 RPA3; replication factor A3
E 132175410 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 132170274 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 132176135 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 132180816 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 132163569 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 132186417 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 132177576 cullin-3B K03869 CUL3; cullin 3
E 132181007 cullin-3A-like K03869 CUL3; cullin 3
E 132163934 uncharacterized protein LOC132163934 K03872 ELOC; elongin-C
E 132184803 uncharacterized protein LOC132184803 isoform X1 K03873 ELOB; elongin-B
E 132182408 uncharacterized protein LOC132182408 K15077 ELA1; elongin-A
E 132182581 uncharacterized protein LOC132182581 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 132183835 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 132181721 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 132166329 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 132168853 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 132189473 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 132189477 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 132189478 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 132189695 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 132190347 LOW QUALITY PROTEIN: DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 132171517 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 132170703 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 132165772 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 132191920 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 132175142 LOW QUALITY PROTEIN: uncharacterized protein LOC132175142 K03504 POLD3; DNA polymerase delta subunit 3
E 132167061 uncharacterized protein LOC132167061 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 132165585 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 132173840 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 132175262 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 132189834 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 132190458 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 132161621 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 132175341 replication protein A 14 kDa subunit B-like isoform X1 K10740 RPA3; replication factor A3
E 132175385 replication protein A 14 kDa subunit A-like K10740 RPA3; replication factor A3
E 132175410 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 132163425 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 132185830 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 132175092 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 132184956 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 132161854 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 132162325 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 132163747 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 132164086 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 132186564 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 132186571 uncharacterized protein LOC132186571 K04802 PCNA; proliferating cell nuclear antigen
E 132184474 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 132163569 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 132184762 uncharacterized protein LOC132184762 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 132173913 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 132177457 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 132183394 nibrin homolog K10867 NBN; nibrin
D BRCA1-core complex
E 132165998 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 132171250 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 132184685 uncharacterized protein LOC132184685 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 132184981 uncharacterized protein LOC132184981 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 132189927 uncharacterized protein LOC132189927 isoform X1 K12173 BRE; BRCA1-A complex subunit BRE
E 132187439 uncharacterized protein LOC132187439 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 132189129 LOW QUALITY PROTEIN: uncharacterized protein LOC132189129 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 132171163 BRCT domain-containing protein At4g02110 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 132184545 uncharacterized protein LOC132184545 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 132173913 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 132177457 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 132183394 nibrin homolog K10867 NBN; nibrin
D BRCA complex
E 132192053 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 132166269 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 132166269 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 132164222 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 132187783 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 132164405 DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 132179354 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 132190180 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 132182276 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 132179102 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 132176595 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 132187543 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 132189251 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 132179068 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 132170620 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 132172585 ATP-dependent DNA helicase Q-like 1 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 132173773 ATP-dependent DNA helicase Q-like 2 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 132170916 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 132188089 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 132165472 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 132176899 ATP-dependent DNA helicase Q-like 5 isoform X1 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 132188089 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 132165472 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 132165455 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 132178526 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 132174937 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 132162807 uncharacterized protein LOC132162807 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162815 uncharacterized protein LOC132162815 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162819 uncharacterized protein LOC132162819 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162823 LOW QUALITY PROTEIN: uncharacterized protein LOC132162823 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162826 LOW QUALITY PROTEIN: uncharacterized protein LOC132162826 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132164373 uncharacterized protein LOC132164373 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 132165585 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 132173840 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 132175262 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 132189834 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 132190458 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 132161621 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 132175341 replication protein A 14 kDa subunit B-like isoform X1 K10740 RPA3; replication factor A3
E 132175385 replication protein A 14 kDa subunit A-like K10740 RPA3; replication factor A3
E 132175410 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 132173752 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 132167961 uncharacterized protein LOC132167961 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 132180775 uncharacterized protein LOC132180775 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 132179364 uncharacterized protein LOC132179364 K19022 AP5B1; AP-5 complex subunit beta-1
E 132190147 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 132176292 uncharacterized protein LOC132176292 isoform X1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 132180353 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 132180841 structural maintenance of chromosomes protein 6B-like isoform X1 K22804 SMC6; structural maintenance of chromosomes protein 6
E 132191045 uncharacterized protein LOC132191045 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 132176590 E3 SUMO-protein ligase MMS21-like isoform X1 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 132175407 E3 SUMO-protein ligase MMS21 isoform X1 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 132164342 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 132192245 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 132166022 crossover junction endonuclease EME1B-like isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 132190951 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 132184597 protein DSS1 HOMOLOG ON CHROMOSOME V-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 132164769 uncharacterized protein LOC132164769 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 132167546 structure-specific endonuclease subunit slx1 isoform X1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 132182273 single-strand DNA endonuclease 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 132186815 flap endonuclease GEN-like 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 132165971 uncharacterized protein LOC132165971 isoform X1 K19026 SPG11; spatacsin
E 132190698 uncharacterized protein LOC132190698 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 132183641 protein MRG1-like K11339 MORF4L1; mortality factor 4-like protein 1
E 132186189 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 132177088 uncharacterized protein LOC132177088 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 132180800 uncharacterized protein LOC132180800 isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 132182638 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 132179055 uncharacterized protein LOC132179055 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 132179284 3'-5' exonuclease isoform X1 K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 132175550 uncharacterized protein LOC132175550 isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 132175063 uncharacterized protein LOC132175063 isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 132180036 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 132181492 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 132179766 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 132188556 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 132173913 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 132177457 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 132190024 DNA ligase 4-like isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 132190423 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 132179283 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 132179367 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 132191376 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 132171080 uncharacterized protein LOC132171080 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 132171287 uncharacterized protein LOC132171287 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 132167338 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 132170960 uncharacterized protein LOC132170960 isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 132181240 DEAD-box ATP-dependent RNA helicase FANCM K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 132176085 protein MHF1 homolog isoform X1 K11511 APITD1; centromere protein S
E 132176129 protein MHF2 homolog K15360 STRA13; centromere protein X
E 132166129 uncharacterized protein LOC132166129 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 132188089 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 132165472 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 132165455 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 132178526 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 132174937 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 132162807 uncharacterized protein LOC132162807 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162815 uncharacterized protein LOC132162815 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162819 uncharacterized protein LOC132162819 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162823 LOW QUALITY PROTEIN: uncharacterized protein LOC132162823 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132162826 LOW QUALITY PROTEIN: uncharacterized protein LOC132162826 K15365 RMI2; RecQ-mediated genome instability protein 2
E 132164373 uncharacterized protein LOC132164373 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 132176485 uncharacterized protein LOC132176485 isoform X1 K10891 FANCD2; fanconi anemia group D2 protein
E 132189055 uncharacterized protein LOC132189055 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 132192053 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 132189129 LOW QUALITY PROTEIN: uncharacterized protein LOC132189129 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 132177299 fanconi-associated nuclease 1 homolog K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 132166269 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 132187783 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 132173600 uncharacterized protein LOC132173600 isoform X1 K11137 TELO2; telomere length regulation protein
E 132168861 uncharacterized protein LOC132168861 isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 132183581 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 132164134 uncharacterized protein LOC132164134 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 132168745 uncharacterized protein LOC132168745 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 132170641 uncharacterized protein LOC132170641 K23314 WRAP53; telomerase Cajal body protein 1
E 132166438 uncharacterized protein LOC132166438 K24752 WDR70; WD repeat-containing protein 70
E 132184762 uncharacterized protein LOC132184762 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 132168508 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 132176902 DNA polymerase kappa-like K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 132179553 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 132173096 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 132179079 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 132174773 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 132164062 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 132178751 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 132162077 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 132179751 ubiquitin-conjugating enzyme E2 variant 1B-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 132191927 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 132181186 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 132175195 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 132163747 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 132164086 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 132186564 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 132186571 uncharacterized protein LOC132186571 K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 132171847 uncharacterized protein LOC132171847 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 132181016 uncharacterized protein LOC132181016 K10903 HUS1; HUS1 checkpoint protein
D 132175932 uncharacterized protein LOC132175932 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 132170947 cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D 132185830 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 132175092 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 132184956 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 132161854 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 132162325 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 132175932 uncharacterized protein LOC132175932 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 132167643 uncharacterized protein LOC132167643 isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
C Triple T complex
D 132173600 uncharacterized protein LOC132173600 isoform X1 K11137 TELO2; telomere length regulation protein
D 132173784 uncharacterized protein LOC132173784 K20403 TTI1; TELO2-interacting protein 1
D 132188479 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 132183714 ubiquitin-like domain-containing protein CIP73 isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 132184419 protein GET4-like K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 132177468 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 132176378 LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 132177373 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 132189154 14-3-3 protein 7 K06630 YWHAE; 14-3-3 protein epsilon
D 132189222 14-3-3-like protein G-BOX factor 14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 132189366 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 132180828 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 132170219 14-3-3-like protein C isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 132186357 14-3-3-like protein G-BOX factor 14 kappa isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 132186538 14-3-3-like protein G-BOX factor 14 kappa isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 132171474 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 132172181 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 132163246 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132163247 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132163486 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132163988 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132191514 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132171143 serine/threonine-protein kinase Nek2-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132172042 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 132191966 uncharacterized protein LOC132191966 isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 132163601 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 132167674 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 132187769 uncharacterized protein LOC132187769 K25059 SDE2; replication stress response regulator SDE2
D 132189878 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 132190002 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 132177820 uncharacterized protein LOC132177820 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 132162680 uncharacterized protein LOC132162680 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 132166123 uncharacterized protein LOC132166123 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 132183266 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 132184760 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 132180763 uncharacterized protein LOC132180763 isoform X1 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 132163976 exonuclease V, chloroplastic-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 132189821 uncharacterized protein LOC132189821 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 132176179 LOW QUALITY PROTEIN: uncharacterized protein LOC132176179 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 132168885 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 132184201 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 132182799 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 132179127 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 132165314 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 132184611 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 132163641 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
D 132162397 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 132179478 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 132184126 deoxyuridine 5'-triphosphate nucleotidohydrolase isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 132165788 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 132184063 ribonucleoside-diphosphate reductase large subunit-like isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 132190994 ribonucleoside-diphosphate reductase small chain-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 132181638 ribonucleoside-diphosphate reductase small chain A isoform X1 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 132183174 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 132175085 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 132177707 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 132187162 DNA-3-methyladenine glycosylase 1-like K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 132188866 DNA-3-methyladenine glycosylase 1-like K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 132184463 alkylbase DNA glycosidase-like protein mag2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 132162208 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 132171036 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 132179632 uncharacterized protein LOC132179632 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 132170588 uncharacterized protein LOC132170588 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 132183740 uncharacterized protein LOC132183740 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 132183857 uncharacterized protein LOC132183857 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 132184298 uncharacterized protein LOC132184298 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 132185874 uncharacterized protein LOC132185874 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 132186785 formamidopyrimidine-DNA glycosylase-like isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 132165841 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 132173848 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 132191816 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 132173512 DNA polymerase I B, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 132174551 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 132173512 DNA polymerase I B, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 132174551 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 30215196 rpoC1; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 30215245 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 132169116 uncharacterized protein LOC132169116 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 132184761 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 132175825 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 132165391 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 132175825 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 132165391 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 132186454 uncharacterized protein LOC132186454 isoform X1 K04485 radA; DNA repair protein RadA/Sms
E 132177513 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 132177403 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 132191857 DNA gyrase subunit B, chloroplastic/mitochondrial-like K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 132164146 uncharacterized protein LOC132164146 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 132175825 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D 132165391 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 132184761 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 132179478 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 132184126 deoxyuridine 5'-triphosphate nucleotidohydrolase isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024