+F Repair protein KO
#
DNA Repair and Recombination Proteins - Cercospora beticola
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D CB0940_09716 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CB0940_00712 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CB0940_07509 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CB0940_02210 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E CB0940_05718 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CB0940_07926 G/U mismatch-specific uracil DNA glycosylase K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E CB0940_04312 N-glycosylase/DNA lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E CB0940_09338 putative DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E CB0940_00549 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E CB0940_10452 DNA-(apurinic or apyrimidinic site) lyase 1 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E CB0940_05818 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F CB0940_03283 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F CB0940_07013 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F CB0940_05656 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F CB0940_10142 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E CB0940_04511 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E CB0940_10288 Flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E CB0940_00096 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E CB0940_03436 Aprataxin-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CB0940_03202 Poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F CB0940_04078 DNA repair protein rhp42 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F CB0940_01057 DNA repair protein rhp42 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F CB0940_03410 UV excision repair protein rhp23 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F CB0940_09347 E3 ubiquitin-protein ligase RBX1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CB0940_02801 Cullin-4B K10609 CUL4; cullin 4
F CB0940_07132 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F CB0940_00334 hypothetical protein K15082 RAD7; DNA repair protein RAD7
F CB0940_09727 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F CB0940_11801 DNA-directed RNA polymerase II subunit rpb1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F CB0940_07655 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F CB0940_00137 DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F CB0940_00450 DNA-directed RNA polymerase II subunit rpb4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F CB0940_10717 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F CB0940_00975 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F CB0940_00500 DNA-directed RNA polymerase II subunit rpb7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F CB0940_07311 DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F CB0940_08413 DNA-directed RNA polymerase II subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F CB0940_11150 DNA-directed RNA polymerase II subunit RPB11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F CB0940_00435 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F CB0940_09347 E3 ubiquitin-protein ligase RBX1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CB0940_02801 Cullin-4B K10609 CUL4; cullin 4
F CB0940_07132 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F CB0940_11304 DNA excision repair protein ckn1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F CB0940_06030 Protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F CB0940_09917 Transcription elongation factor 1 K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E CB0940_09207 putative DNA repair helicase ercc3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E CB0940_10093 DNA repair helicase rad15 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E CB0940_08448 putative RNA polymerase II transcription factor B subunit 1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E CB0940_02684 TFIIH basal transcription factor complex p47 subunit K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E CB0940_07377 RNA polymerase II transcription factor B subunit 4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E CB0940_05941 RNA polymerase II transcription factor B subunit 2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E CB0940_11764 RNA polymerase II transcription factor B subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E CB0940_11089 Serine/threonine-protein kinase crk1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E CB0940_09268 Cyclin mcs2 K06634 CCNH; cyclin H
E CB0940_01748 RNA polymerase II transcription factor B subunit 3 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E CB0940_10326 Replication factor A protein 1 K07466 RFA1; replication factor A1
E CB0940_07324 Replication protein A 32 kDa subunit K10739 RFA2; replication factor A2
E CB0940_03059 Replication factor A protein 3 K10740 RPA3; replication factor A3
D Other NER factors
E CB0940_09723 DNA repair protein RAD14 K10847 XPA; DNA-repair protein complementing XP-A cells
E CB0940_00404 Mating-type switching protein swi10 K10849 ERCC1; DNA excision repair protein ERCC-1
E CB0940_01299 DNA repair protein rad16 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E CB0940_01801 DNA repair protein rad13 K10846 ERCC5; DNA excision repair protein ERCC-5
E CB0940_00096 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CB0940_00455 MMS19 nucleotide excision repair protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E CB0940_10322 Cullin-3A K03869 CUL3; cullin 3
E CB0940_07098 Elongin-C K03872 ELOC; elongin-C
E CB0940_10707 hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E CB0940_10701 DNA mismatch repair protein msh-2 K08735 MSH2; DNA mismatch repair protein MSH2
E CB0940_11266 DNA mismatch repair protein msh3 K08736 MSH3; DNA mismatch repair protein MSH3
E CB0940_01551 DNA mismatch repair protein msh6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E CB0940_07309 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E CB0940_03124 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E CB0940_03283 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E CB0940_07013 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E CB0940_10326 Replication factor A protein 1 K07466 RFA1; replication factor A1
E CB0940_07324 Replication protein A 32 kDa subunit K10739 RFA2; replication factor A2
E CB0940_03059 Replication factor A protein 3 K10740 RPA3; replication factor A3
D RFC (replication factor C)
E CB0940_00129 Replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E CB0940_04394 Replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E CB0940_02663 Replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E CB0940_09697 Replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E CB0940_01921 Replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E CB0940_04511 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E CB0940_10013 Exodeoxyribonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E CB0940_00096 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CB0940_10355 DNA damage-binding protein cmr1 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E CB0940_06809 Double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E CB0940_07918 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E CB0940_06809 Double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E CB0940_07918 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E CB0940_01371 DNA repair protein rhp51 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E CB0940_01371 DNA repair protein rhp51 K04482 RAD51; DNA repair protein RAD51
E CB0940_03684 DNA repair protein rhp57 K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E CB0940_05199 DNA repair and recombination protein radC K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E CB0940_10772 DNA repair protein rhp54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E CB0940_03456 DNA repair and recombination protein RAD54B K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E CB0940_02081 ATP-dependent DNA helicase hus2/rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E CB0940_02081 ATP-dependent DNA helicase hus2/rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CB0940_01021 DNA topoisomerase 3 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CB0940_05376 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E CB0940_10326 Replication factor A protein 1 K07466 RFA1; replication factor A1
E CB0940_07324 Replication protein A 32 kDa subunit K10739 RFA2; replication factor A2
E CB0940_03059 Replication factor A protein 3 K10740 RPA3; replication factor A3
D Protein phosphatase 4
E CB0940_08832 hypotheticalsprotein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E CB0940_01582 Structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E CB0940_05651 Structural maintenance of chromosomes protein 6 K22804 SMC6; structural maintenance of chromosomes protein 6
E CB0940_06236 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E CB0940_01114 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E CB0940_08330 Non-structural maintenance of chromosomes element 4 A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E CB0940_00744 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E CB0940_09544 hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3
E CB0940_07650 hypothetical protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E CB0940_09719 Structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E CB0940_12059 Flap endonuclease GEN 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E CB0940_00663 Chromatin modification-related protein eaf3 K11339 MORF4L1; mortality factor 4-like protein 1
E CB0940_05736 Protein SAP1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E CB0940_04117 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E CB0940_04495 ATP-dependent DNA helicase mph1 K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E CB0940_08529 ATP-dependent DNA helicase II subunit 1 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E CB0940_01304 ATP-dependent DNA helicase II subunit 2 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E CB0940_06809 Double-strand break repair protein mus-23 K10865 MRE11; double-strand break repair protein MRE11
E CB0940_07918 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E CB0940_09258 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E CB0940_02516 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E CB0940_08368 DNA polymerase type-X family protein pol4 K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
E CB0940_00261 DNA polymerase lambda K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E CB0940_03436 Aprataxin-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CB0940_12092 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E CB0940_02012 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E CB0940_01402 hypothetical protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E CB0940_02081 ATP-dependent DNA helicase hus2/rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CB0940_01021 DNA topoisomerase 3 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CB0940_05376 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E CB0940_04770 Fanconi-associated nuclease 1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E CB0940_01371 DNA repair protein rhp51 K04482 RAD51; DNA repair protein RAD51
E CB0940_04410 hypothetical protein K11137 TELO2; telomere length regulation protein
E CB0940_07367 UBP9-binding protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E CB0940_06944 Guanine nucleotide-binding protein negative regulator 1 K23314 WRAP53; telomerase Cajal body protein 1
E CB0940_09976 putative WD repeat-containing protein K24752 WDR70; WD repeat-containing protein 70
E CB0940_10355 DNA damage-binding protein cmr1 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D CB0940_08299 N-acetyltransferase eso1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D CB0940_01808 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D CB0940_10271 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D CB0940_05485 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D CB0940_11819 Ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D CB0940_07163 Postreplication repair E3 ubiquitin-protein ligase rad18 K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D CB0940_02864 DNA repair protein rad5 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D CB0940_11520 Helicase-like transcription factor K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D CB0940_00561 Ubiquitin-conjugating enzyme variant MMS2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D CB0940_01820 Ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D CB0940_04511 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D CB0940_05380 HMG box-containing protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D CB0940_06239 DNA repair protein rad9 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D CB0940_03139 Checkpoint protein hus1 K10903 HUS1; HUS1 checkpoint protein
D CB0940_07837 Cell cycle checkpoint protein RAD1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D CB0940_01738 Cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D CB0940_04394 Replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D CB0940_02663 Replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D CB0940_09697 Replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D CB0940_01921 Replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D CB0940_07837 Cell cycle checkpoint protein RAD1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D CB0940_06519 Topoisomerase 1-associated factor 1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D CB0940_06000 Chromosome segregation in meiosis protein 3 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D CB0940_12013 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D CB0940_04410 hypothetical protein K11137 TELO2; telomere length regulation protein
D CB0940_08850 TEL2-interacting protein 1 K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D CB0940_09316 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D CB0940_09234 Golgi to ER traffic protein 4 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D CB0940_06202 Protein kinase rad3 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D CB0940_02893 Serine/threonine-protein kinase tel1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D CB0940_04954 Serine/threonine-protein kinase chk1 K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D CB0940_11249 putative serine/threonine-protein kinase fhkC K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D CB0940_10408 M-phase inducer phosphatase K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D CB0940_11147 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D CB0940_11962 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D CB0940_10179 Mitosis inhibitor protein kinase wee1 K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D CB0940_00963 Fork-head transcriptional regulator 2 K24664 FKH; forkhead protein FKH
D CB0940_05676 Vacuolar protein sorting-associated protein 4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D CB0940_01578 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D CB0940_10767 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D CB0940_00694 DNA cross-link repair protein pso2/snm1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D CB0940_10189 putative exonuclease V, mitochondrial K17815 EXO5; exonuclease V [EC:3.1.-.-]
D CB0940_09317 Nuclease PA3 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D CB0940_07478 Switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D CB0940_03375 Pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D CB0940_07376 Pre-mRNA-splicing factor cef1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D CB0940_11887 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D CB0940_01168 Pre-mRNA-splicing factor prp46 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D CB0940_11562 putative 8-oxo-dGTP diphosphatase NUDT15 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CB0940_04264 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CB0940_04556 putative deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CB0940_04901 Ribonucleoside-diphosphate reductase large chain K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D CB0940_02524 Ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D CB0940_09716 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CB0940_00712 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CB0940_07509 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CB0940_02210 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E CB0940_05718 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CB0940_04939 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E CB0940_00638 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E CB0940_09338 putative DNA glycosylase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E CB0940_00549 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E CB0940_00587 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E CB0940_00587 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D CB0940_11562 putative 8-oxo-dGTP diphosphatase NUDT15 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CB0940_04264 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CB0940_04556 putative deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024