+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Clostridium botulinum H04402 065

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D H04402_02481 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C H04402_03033 GTP-binding protein Era K03595 era; GTPase C H04402_03080 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C H04402_02448 transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA C H04402_01895 transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB C H04402_03596 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D H04402_03359 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D H04402_00073 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D H04402_02535 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D H04402_02522 ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D H04402_03044 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D H04402_03740A 16s rRNAmethyltransferase GidA K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D H04402_01524 rRNAsmall subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D H04402_00055 rRNAsmall subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D H04402_01889 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D H04402_03602 trmh family tRNA/rRNAmethyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D H04402_03671 LSU m3Psi1915 methyltransferase RlmH ## ybeA K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D H04402_02534 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D H04402_02943 putative florfenicol resistance protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224] D H04402_01889 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D H04402_03467 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D H04402_02949 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D H04402_01808 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D H04402_01502 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D H04402_03074 similar to ribosomal large subunit pseudouridine synthase D, CAC1266-type K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D H04402_01547 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C H04402_03405 ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C H04402_00033 ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C H04402_02472 16s rRNAprocessing protein RimM K02860 rimM; 16S rRNA processing protein RimM C H04402_02433 ribosomal protein S12p Asp88 (E. coli) methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C H04402_03045 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C H04402_02481 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C H04402_03084 cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C H04402_02662 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C H04402_03604 ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C H04402_02882 cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C H04402_01774 ATP-dependent RNA helicase YxiN K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C H04402_01775 ATP-dependent RNA helicase YxiN K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C H04402_02038 ATP-dependent RNA helicase BA2475 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C H04402_01772 ATP-dependent RNA helicase YfmL K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C H04402_03033 GTP-binding protein Era K03595 era; GTPase C H04402_02531 ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C H04402_02551 GTP-binding protein EngA K03977 engA; GTPase C H04402_03080 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-] C H04402_02468 50s ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF) K14540 rbgA; ribosome biogenesis GTPase A C H04402_03152 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C H04402_00133 sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C H04402_03131 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C H04402_02444 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C H04402_02449 clustered with transcription termination protein NusA K09748 rimP; ribosome maturation factor RimP C H04402_00003 hypothetical protein K14761 rlbA; ribosome-associated protein C H04402_03036 metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor C H04402_03079 RNA binding protein K07574 yhbY; RNA-binding protein C H04402_00161 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C H04402_01522 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase C H04402_02485 protein, clustered with ribosomal protein L32p K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024