+D GENES KO
#
KEGG Orthology (KO) - Chryseobacterium camelliae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ccab00010]
D PFY12_14915 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PFY12_09015 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PFY12_08525 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PFY12_04635 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PFY12_09780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFY12_15050 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PFY12_06510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFY12_09440 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFY12_01365 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFY12_11390 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFY12_07110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFY12_01500 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PFY12_05830 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PFY12_01505 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_04820 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PFY12_06885 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_03405 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D PFY12_11045 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ccab00020]
D PFY12_11395 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PFY12_08315 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PFY12_08310 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PFY12_03350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PFY12_01005 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PFY12_01010 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_01065 dihydrolipoamide acetyltransferase family protein K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_05190 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PFY12_06455 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PFY12_07225 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PFY12_07220 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PFY12_07230 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PFY12_08655 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PFY12_08660 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PFY12_12920 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PFY12_11045 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PFY12_01500 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PFY12_05830 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PFY12_01505 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ccab00030]
D PFY12_08525 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFY12_00885 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PFY12_13225 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFY12_13230 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFY12_02890 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PFY12_09435 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PFY12_06375 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_10055 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PFY12_03405 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D PFY12_15400 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PFY12_09780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFY12_04635 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ccab00040]
D PFY12_10985 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PFY12_00885 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ccab00051]
D PFY12_07610 phosphomannose isomerase type II C-terminal cupin domain K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PFY12_09270 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PFY12_05510 sugar phosphate nucleotidyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFY12_09665 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PFY12_04635 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PFY12_09780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFY12_15050 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PFY12_09435 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ccab00052]
D PFY12_00265 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_14915 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PFY12_09015 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:ccab00053]
D PFY12_10985 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PFY12_15400 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PFY12_05265 NAD-dependent epimerase/dehydratase family protein K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D PFY12_08980 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:ccab00500]
D PFY12_01295 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03560 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_04075 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03865 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03485 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PFY12_00995 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PFY12_13105 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PFY12_00990 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PFY12_00985 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PFY12_13030 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PFY12_06870 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PFY12_04730 alpha-amylase family glycosyl hydrolase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PFY12_00695 glycoside hydrolase family 97 protein K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D PFY12_11585 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_14915 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PFY12_09015 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PFY12_08525 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ccab00520]
D PFY12_11645 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PFY12_15460 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PFY12_13115 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PFY12_04260 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PFY12_10705 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PFY12_10690 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PFY12_06080 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PFY12_06130 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PFY12_05475 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D PFY12_00255 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PFY12_05485 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PFY12_05480 acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PFY12_05495 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D PFY12_05410 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PFY12_14915 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PFY12_09015 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_10985 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PFY12_00265 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFY12_08980 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PFY12_08525 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFY12_07610 phosphomannose isomerase type II C-terminal cupin domain K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PFY12_09270 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PFY12_05510 sugar phosphate nucleotidyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFY12_09665 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFY12_05265 NAD-dependent epimerase/dehydratase family protein K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D PFY12_00995 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ccab00620]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PFY12_01500 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PFY12_05830 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PFY12_01505 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_04820 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PFY12_06885 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PFY12_07110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFY12_07620 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PFY12_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PFY12_07540 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PFY12_09775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PFY12_12725 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PFY12_06250 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PFY12_08790 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PFY12_15475 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PFY12_12030 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PFY12_12920 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PFY12_08655 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PFY12_08660 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PFY12_00240 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PFY12_11045 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PFY12_05960 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ccab00630]
D PFY12_05955 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PFY12_05960 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PFY12_11395 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PFY12_08315 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PFY12_08310 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_12595 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFY12_08620 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_02730 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_08240 catalase K03781 katE; catalase [EC:1.11.1.6]
D PFY12_10270 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFY12_05525 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFY12_03240 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PFY12_15915 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_12045 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:ccab00640]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PFY12_00390 AMP-binding protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PFY12_15235 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_07620 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PFY12_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PFY12_07540 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PFY12_09775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PFY12_12595 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFY12_08620 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_02730 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_06455 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PFY12_05190 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PFY12_08310 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PFY12_00205 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:ccab00650]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_03500 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PFY12_11825 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PFY12_01670 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PFY12_08245 enoyl-CoA hydratase-related protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PFY12_07225 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PFY12_07220 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PFY12_07230 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PFY12_07115 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PFY12_04710 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PFY12_09870 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PFY12_15435 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PFY12_15450 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D PFY12_06455 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PFY12_05190 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:ccab00562]
D PFY12_14985 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D PFY12_15050 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ccab00190]
D PFY12_12540 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PFY12_12535 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PFY12_12530 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PFY12_12525 nuoD; NADH dehydrogenase (quinone) subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PFY12_12520 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PFY12_12515 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PFY12_12505 2Fe-2S iron-sulfur cluster-binding protein K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PFY12_12500 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PFY12_12495 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PFY12_12490 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PFY12_12485 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PFY12_12480 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PFY12_12475 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PFY12_06395 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PFY12_07225 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PFY12_07220 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PFY12_07230 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PFY12_06590 ccoN; cytochrome-c oxidase, cbb3-type subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D PFY12_08395 ccoN; cytochrome-c oxidase, cbb3-type subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D PFY12_06595 c-type cytochrome K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PFY12_08405 c-type cytochrome K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PFY12_15755 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PFY12_15750 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PFY12_15735 c-type cytochrome K08738 CYC; cytochrome c
D PFY12_01135 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PFY12_02410 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PFY12_01140 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PFY12_01130 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PFY12_02405 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PFY12_01115 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PFY12_01125 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PFY12_01120 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PFY12_01540 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PFY12_05005 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ccab00710]
D PFY12_09440 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFY12_06510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFY12_09780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFY12_04635 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PFY12_13225 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFY12_13230 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFY12_09435 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PFY12_15050 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PFY12_00885 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PFY12_02890 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PFY12_00240 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PFY12_11045 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PFY12_12030 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ccab00720]
D PFY12_00240 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PFY12_08655 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PFY12_08660 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PFY12_07225 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PFY12_07220 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PFY12_07230 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PFY12_05190 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PFY12_06455 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_03350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PFY12_08315 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PFY12_08310 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PFY12_07620 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PFY12_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PFY12_07540 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PFY12_09775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PFY12_12595 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFY12_08620 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_02730 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_08530 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PFY12_11555 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ccab00680]
D PFY12_05525 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFY12_11390 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFY12_00240 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PFY12_09780 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFY12_04635 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PFY12_08465 (Fe-S)-binding protein K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PFY12_01365 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFY12_01180 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_08280 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_15940 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_01185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:ccab00910]
D PFY12_10030 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PFY12_10270 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFY12_10830 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PFY12_10845 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ccab00920]
D PFY12_03735 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PFY12_03740 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PFY12_07490 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PFY12_03745 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PFY12_04215 quinol oxidase K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2]
D PFY12_09875 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PFY12_10850 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PFY12_11525 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PFY12_11535 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ccab00061]
D PFY12_07620 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PFY12_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PFY12_07540 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PFY12_09775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PFY12_07090 acyl carrier protein K02078 acpP; acyl carrier protein
D PFY12_08080 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D PFY12_08145 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D PFY12_11035 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PFY12_00805 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_04190 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_08030 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_15835 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_08150 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PFY12_07095 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_10470 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_08085 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_08155 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_09490 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_08115 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PFY12_05215 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PFY12_01310 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PFY12_14330 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D PFY12_01370 acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D PFY12_04380 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_15280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ccab00071]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_01665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PFY12_01670 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PFY12_01265 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_08500 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_04380 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_15280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_04820 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ccab00561]
D PFY12_06885 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PFY12_12010 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:ccab00564]
D PFY12_12915 NAD(P)-binding domain-containing protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PFY12_12010 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PFY12_00270 adenylyltransferase/cytidyltransferase family protein K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D PFY12_14985 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D PFY12_13730 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PFY12_10595 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PFY12_05845 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PFY12_10600 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
D PFY12_14985 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:ccab00600]
D PFY12_01305 glycoside hydrolase family 30 protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PFY12_01290 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PFY12_15460 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
D PFY12_11545 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:ccab00592]
D PFY12_01665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ccab01040]
D PFY12_01370 acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ccab00230]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_10055 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PFY12_02050 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PFY12_00105 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PFY12_00095 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PFY12_03540 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PFY12_00090 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PFY12_04330 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PFY12_04320 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PFY12_02045 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PFY12_03550 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PFY12_00100 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PFY12_10140 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PFY12_12950 metallophosphatase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PFY12_09515 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PFY12_06855 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PFY12_12720 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PFY12_14060 phosphoribosyltransferase family protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PFY12_07775 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PFY12_00875 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PFY12_15310 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PFY12_00110 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PFY12_09495 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D PFY12_06290 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PFY12_05595 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PFY12_05585 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PFY12_03220 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PFY12_00375 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PFY12_05010 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PFY12_14070 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PFY12_03600 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PFY12_14055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PFY12_03735 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PFY12_03740 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ccab00240]
D PFY12_00485 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PFY12_00480 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PFY12_00475 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PFY12_11695 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PFY12_10425 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PFY12_06345 pyrF; orotidine-5'-phosphate decarboxylase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
D PFY12_01740 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PFY12_00875 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PFY12_09390 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PFY12_06655 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PFY12_01730 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PFY12_02740 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PFY12_12950 metallophosphatase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PFY12_09515 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PFY12_01335 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PFY12_05980 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PFY12_04845 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PFY12_05595 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PFY12_05585 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PFY12_03600 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PFY12_08250 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PFY12_09470 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PFY12_04720 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ccab00250]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_10750 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PFY12_13185 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PFY12_13285 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PFY12_10915 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PFY12_08800 nitrilase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PFY12_15020 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PFY12_13955 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PFY12_00435 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PFY12_00465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PFY12_14070 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PFY12_03550 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PFY12_00475 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PFY12_07115 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PFY12_10030 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PFY12_04170 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D PFY12_10270 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFY12_00485 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PFY12_00480 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PFY12_13115 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PFY12_02050 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ccab00260]
D PFY12_00710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_04640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_11530 ACT domain-containing protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PFY12_10725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFY12_02280 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PFY12_05525 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFY12_01365 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFY12_01180 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_08280 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_15940 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_01185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PFY12_02385 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PFY12_15535 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PFY12_00845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PFY12_03240 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PFY12_15915 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_12045 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PFY12_05845 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PFY12_02380 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PFY12_04685 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PFY12_04895 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PFY12_14935 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PFY12_15690 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PFY12_15695 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ccab00270]
D PFY12_10850 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PFY12_04895 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PFY12_02380 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PFY12_04685 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PFY12_11550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_11540 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_08230 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PFY12_02155 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PFY12_15220 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PFY12_14795 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PFY12_12685 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PFY12_04305 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PFY12_04790 pyridoxal-phosphate dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PFY12_00710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_04640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_11530 ACT domain-containing protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PFY12_10725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFY12_11525 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PFY12_11535 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PFY12_00910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_09875 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PFY12_04970 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PFY12_14935 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PFY12_01180 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_08280 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_15940 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_01185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ccab00280]
D PFY12_00910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PFY12_15235 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_01665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PFY12_12595 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFY12_08620 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_02730 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_12135 acyl-CoA carboxylase subunit beta K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PFY12_09870 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PFY12_15435 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PFY12_15450 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_04710 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ccab00290]
D PFY12_00910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:ccab00300]
D PFY12_00710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_04640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_11530 ACT domain-containing protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PFY12_10725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFY12_12960 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PFY12_14095 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PFY12_01865 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PFY12_00445 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFY12_05810 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFY12_00285 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PFY12_08775 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PFY12_09125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PFY12_04275 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PFY12_09465 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:ccab00310]
D PFY12_01810 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D PFY12_01010 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_01065 dihydrolipoamide acetyltransferase family protein K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_01265 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_08500 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_07115 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PFY12_05490 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
C 00220 Arginine biosynthesis [PATH:ccab00220]
D PFY12_00435 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PFY12_00465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PFY12_10270 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFY12_00485 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PFY12_00480 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PFY12_10030 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_00455 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PFY12_00440 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PFY12_00445 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFY12_05810 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFY12_00460 M20 family metallo-hydrolase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ccab00330]
D PFY12_05095 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PFY12_05085 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PFY12_07545 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D PFY12_02630 proline dehydrogenase family protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D PFY12_04170 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ccab00340]
D PFY12_01880 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PFY12_01915 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PFY12_01905 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PFY12_01900 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PFY12_05420 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PFY12_01910 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PFY12_05415 AglZ/HisF2 family acetamidino modification protein K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PFY12_01895 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PFY12_01890 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFY12_01885 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PFY12_08160 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PFY12_12175 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PFY12_03455 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PFY12_07125 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PFY12_07120 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:ccab00350]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_01890 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFY12_13460 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PFY12_13470 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PFY12_13450 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PFY12_04820 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PFY12_07115 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ccab00360]
D PFY12_08175 AMP-binding protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D PFY12_11785 AMP-binding protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D PFY12_11835 PaaI family thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D PFY12_11795 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D PFY12_11800 paaB; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D PFY12_11805 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D PFY12_11815 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D PFY12_11790 FAD-binding oxidoreductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D PFY12_01695 ferredoxin--NADP reductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D PFY12_11820 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PFY12_11865 paaZ; phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D PFY12_03500 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PFY12_11825 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_01890 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFY12_13460 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PFY12_06065 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D PFY12_09100 alpha/beta hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:ccab00380]
D PFY12_01010 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_01065 dihydrolipoamide acetyltransferase family protein K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_01265 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_08500 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_08240 catalase K03781 katE; catalase [EC:1.11.1.6]
D PFY12_06065 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ccab00400]
D PFY12_02065 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PFY12_11050 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PFY12_13075 AAA family ATPase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PFY12_07820 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PFY12_06325 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PFY12_15720 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PFY12_15715 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PFY12_15710 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PFY12_15700 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PFY12_15705 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PFY12_15690 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PFY12_15695 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PFY12_00865 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D PFY12_14955 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PFY12_00115 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_01890 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ccab00410]
D PFY12_05760 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PFY12_13100 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ccab00430]
D PFY12_15815 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PFY12_15020 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D PFY12_14785 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ccab00450]
D PFY12_11550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_11540 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_04895 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PFY12_15220 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PFY12_10200 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PFY12_00565 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PFY12_13340 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PFY12_03735 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PFY12_03740 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PFY12_00070 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ccab00460]
D PFY12_01295 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03560 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_04075 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03865 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_15815 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PFY12_13185 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PFY12_05525 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ccab00470]
D PFY12_09465 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PFY12_12325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFY12_12355 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PFY12_09135 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PFY12_08590 chloromuconate cycloisomerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D PFY12_00285 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PFY12_08775 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ccab00480]
D PFY12_15815 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PFY12_04715 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PFY12_13355 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PFY12_03350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PFY12_02445 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ccab00511]
D PFY12_15460 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PFY12_15505 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D PFY12_00880 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PFY12_03870 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PFY12_15490 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D PFY12_01305 glycoside hydrolase family 30 protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PFY12_01290 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:ccab00540]
D PFY12_05210 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PFY12_05215 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PFY12_05195 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PFY12_05220 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PFY12_05940 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PFY12_07240 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PFY12_06850 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PFY12_02845 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PFY12_02355 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PFY12_09385 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PFY12_02455 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PFY12_07395 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PFY12_01035 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ccab00542]
D PFY12_07980 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ccab00541]
D PFY12_00265 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFY12_10985 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PFY12_08980 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PFY12_10965 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_11685 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_10970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PFY12_05250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PFY12_07935 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PFY12_07610 phosphomannose isomerase type II C-terminal cupin domain K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PFY12_09270 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PFY12_05510 sugar phosphate nucleotidyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFY12_09665 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFY12_05410 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PFY12_05400 NAD-dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D PFY12_05395 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D PFY12_05495 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D PFY12_05475 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D PFY12_00255 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PFY12_05485 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PFY12_05480 acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:ccab00550]
D PFY12_06080 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PFY12_06130 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PFY12_09155 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PFY12_09135 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PFY12_09125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PFY12_12325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFY12_04275 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PFY12_09465 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PFY12_07960 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PFY12_15360 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFY12_00340 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFY12_09130 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PFY12_09145 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PFY12_03720 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PFY12_10080 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFY12_10250 penicillin-binding transpeptidase domain-containing protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PFY12_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PFY12_02870 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PFY12_15525 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ccab00552]
D PFY12_15360 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFY12_00340 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFY12_07980 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ccab00543]
D PFY12_07980 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PFY12_10850 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ccab00730]
D PFY12_08350 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PFY12_08340 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PFY12_14155 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFY12_08325 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PFY12_08330 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PFY12_08335 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PFY12_08345 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PFY12_09860 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PFY12_00870 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PFY12_05105 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PFY12_14055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ccab00740]
D PFY12_11655 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PFY12_06200 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PFY12_12565 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PFY12_06800 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PFY12_10150 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PFY12_07515 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PFY12_02415 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:ccab00750]
D PFY12_05770 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PFY12_01185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PFY12_04395 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ccab00760]
D PFY12_10750 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PFY12_06295 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PFY12_10740 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PFY12_11190 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PFY12_06855 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PFY12_12720 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PFY12_12950 metallophosphatase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PFY12_09515 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PFY12_11425 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PFY12_04920 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PFY12_02080 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PFY12_09325 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PFY12_09785 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PFY12_07115 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ccab00770]
D PFY12_08375 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PFY12_13100 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PFY12_10300 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PFY12_08690 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PFY12_12315 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PFY12_07145 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PFY12_06685 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PFY12_00910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PFY12_05760 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ccab00780]
D PFY12_08150 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PFY12_07095 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_10470 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_08085 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_08155 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_09490 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_08115 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PFY12_01310 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PFY12_02175 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PFY12_02190 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PFY12_02180 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PFY12_02185 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D PFY12_10575 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ccab00785]
D PFY12_15685 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PFY12_14220 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_01500 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PFY12_05830 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PFY12_01505 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PFY12_01005 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PFY12_01010 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_01065 dihydrolipoamide acetyltransferase family protein K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PFY12_15235 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PFY12_03240 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PFY12_15915 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PFY12_12045 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ccab00790]
D PFY12_11565 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PFY12_06300 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PFY12_15070 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PFY12_12295 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PFY12_09650 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PFY12_11655 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PFY12_06200 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PFY12_08915 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PFY12_08920 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PFY12_05945 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PFY12_08535 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:ccab00670]
D PFY12_12295 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PFY12_08530 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PFY12_05525 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFY12_00095 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PFY12_00100 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PFY12_06195 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PFY12_15915 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PFY12_11550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_11540 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_04720 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PFY12_11555 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PFY12_11145 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ccab00860]
D PFY12_10230 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PFY12_04780 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PFY12_05145 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PFY12_10225 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PFY12_10545 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PFY12_10210 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PFY12_10205 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PFY12_00310 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PFY12_15545 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PFY12_06235 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PFY12_05110 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PFY12_14865 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PFY12_14860 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PFY12_14870 alpha-ribazole phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D PFY12_00055 sigma 54-interacting transcriptional regulator K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ccab00130]
D PFY12_15845 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PFY12_04505 chorismate-binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
D PFY12_06570 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PFY12_02545 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PFY12_04480 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PFY12_02540 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PFY12_13460 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ccab00900]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_04710 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PFY12_06485 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D PFY12_02640 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PFY12_04375 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D PFY12_15925 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PFY12_14000 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PFY12_03950 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PFY12_07960 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ccab00907]
D PFY12_09870 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PFY12_01665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PFY12_13225 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFY12_13230 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ccab00523]
D PFY12_10965 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_11685 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_10970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PFY12_05250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PFY12_07935 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PFY12_05290 NAD-dependent epimerase/dehydratase family protein K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PFY12_04505 chorismate-binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D PFY12_10970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ccab00946]
D PFY12_01295 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03560 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_04075 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03865 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PFY12_03490 bla-A; CGA/CIA family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ccab00261]
D PFY12_03735 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PFY12_03740 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PFY12_00710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_04640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFY12_11530 ACT domain-containing protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PFY12_10725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFY12_12960 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PFY12_14095 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ccab00521]
D PFY12_14915 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PFY12_09015 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PFY12_02470 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PFY12_10965 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_11685 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_10970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PFY12_05250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PFY12_07935 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PFY12_14915 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PFY12_09015 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ccab00525]
D PFY12_10965 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_11685 sugar phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PFY12_10970 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ccab00401]
D PFY12_14955 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_01890 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PFY12_15720 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PFY12_15715 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PFY12_11035 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PFY12_08155 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_09490 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_01310 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PFY12_07090 acyl carrier protein K02078 acpP; acyl carrier protein
D PFY12_08080 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D PFY12_08145 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ccab00999]
D PFY12_08230 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PFY12_01295 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03560 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_04075 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PFY12_03865 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ccab00362]
D PFY12_01665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PFY12_11845 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D PFY12_01670 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PFY12_01265 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_08500 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PFY12_03500 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PFY12_11825 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ccab00625]
D PFY12_04820 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D PFY12_01665 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ccab00643]
D PFY12_13470 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PFY12_13450 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D PFY12_15400 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:ccab00626]
D PFY12_04820 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ccab03020]
D PFY12_06935 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PFY12_06930 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PFY12_11375 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ccab03010]
D PFY12_15410 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PFY12_07680 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PFY12_11275 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PFY12_11370 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PFY12_11330 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PFY12_01055 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PFY12_11210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PFY12_11315 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PFY12_07685 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PFY12_11220 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PFY12_11365 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PFY12_11205 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PFY12_11360 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PFY12_11310 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PFY12_14815 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PFY12_05705 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PFY12_11290 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PFY12_01050 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PFY12_11265 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PFY12_11105 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PFY12_07065 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PFY12_06960 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PFY12_11260 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PFY12_11245 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PFY12_11250 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PFY12_11305 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PFY12_11320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PFY12_06950 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PFY12_01045 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PFY12_06955 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PFY12_06965 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PFY12_07690 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PFY12_11295 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PFY12_11340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PFY12_11280 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PFY12_11380 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PFY12_11325 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PFY12_15430 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PFY12_01925 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PFY12_08845 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PFY12_11270 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PFY12_11255 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PFY12_11300 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PFY12_10050 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PFY12_08840 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PFY12_06145 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PFY12_11285 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PFY12_11335 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PFY12_07805 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PFY12_07530 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PFY12_06150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PFY12_07495 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PFY12_01930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PFY12_11355 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PFY12_07890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PFY12_07875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PFY12_12070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PFY12_07870 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ccab00970]
D PFY12_07880 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFY12_03730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFY12_12740 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFY12_14165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFY12_06310 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PFY12_05990 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PFY12_11095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFY12_11110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFY12_09240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFY12_07025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFY12_07325 tRNA-His K14226 tRNA-His; tRNA His
D PFY12_07885 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PFY12_13085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFY12_13080 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFY12_11990 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFY12_12600 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PFY12_04650 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PFY12_13810 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFY12_00570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFY12_13180 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFY12_07020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFY12_06985 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PFY12_09640 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFY12_07615 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFY12_04625 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PFY12_15090 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFY12_07285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFY12_05685 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PFY12_10415 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PFY12_01980 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PFY12_08430 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PFY12_11575 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PFY12_00070 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PFY12_06195 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PFY12_05635 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PFY12_07365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFY12_08180 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PFY12_15740 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PFY12_06620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFY12_15185 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PFY12_00965 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PFY12_13325 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PFY12_03520 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PFY12_14210 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFY12_08210 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ccab03060]
D PFY12_11345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFY12_06980 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFY12_13380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFY12_00325 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D PFY12_07300 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFY12_06650 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFY12_08990 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFY12_01105 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PFY12_02525 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D PFY12_06160 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PFY12_11670 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PFY12_02850 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PFY12_14100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PFY12_08200 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ccab04122]
D PFY12_14155 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFY12_09875 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PFY12_09595 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PFY12_08320 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PFY12_08355 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:ccab03018]
D PFY12_11390 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFY12_14825 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PFY12_00185 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PFY12_02085 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PFY12_14020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PFY12_09425 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PFY12_13985 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFY12_02840 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFY12_06190 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFY12_10630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PFY12_15865 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PFY12_05000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PFY12_06725 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFY12_05005 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PFY12_04860 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ccab03030]
D PFY12_01020 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_05850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_08780 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_15245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFY12_00855 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFY12_04245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFY12_00560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFY12_03525 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFY12_10775 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PFY12_14660 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PFY12_15035 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PFY12_00955 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PFY12_10770 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PFY12_06645 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PFY12_13685 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PFY12_13725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ccab03410]
D PFY12_09685 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PFY12_04420 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PFY12_14310 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PFY12_03225 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PFY12_01320 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PFY12_04205 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PFY12_05235 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PFY12_13685 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PFY12_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFY12_13725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ccab03420]
D PFY12_10815 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PFY12_01585 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PFY12_02590 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PFY12_08890 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PFY12_12165 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PFY12_13395 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFY12_13685 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PFY12_13725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ccab03430]
D PFY12_09810 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PFY12_04430 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D PFY12_09215 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PFY12_13395 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFY12_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFY12_00955 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PFY12_15245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFY12_03525 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFY12_00855 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFY12_00560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFY12_04245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFY12_01020 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_05850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_08780 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_13725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ccab03440]
D PFY12_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFY12_00955 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PFY12_03705 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PFY12_13370 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PFY12_06525 recA; recombinase RecA K03553 recA; recombination protein RecA
D PFY12_13685 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PFY12_12035 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PFY12_07130 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PFY12_07745 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PFY12_12980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PFY12_15245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFY12_03525 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFY12_00855 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFY12_00560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFY12_04245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFY12_01020 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_05850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_08780 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_15520 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ccab03250]
D PFY12_00920 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ccab02010]
D PFY12_08475 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PFY12_08545 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PFY12_08550 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PFY12_04070 metQ; methionine ABC transporter substrate-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D PFY12_04065 methionine ABC transporter permease MetI K02072 metI; D-methionine transport system permease protein
D PFY12_04060 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D PFY12_10960 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D PFY12_10955 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PFY12_04680 FtsX-like permease family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PFY12_12585 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D PFY12_01510 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PFY12_01765 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D PFY12_10570 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D PFY12_05135 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PFY12_15350 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PFY12_07500 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D PFY12_10615 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PFY12_07315 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PFY12_06830 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:ccab03070]
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
D PFY12_00325 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D PFY12_06980 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFY12_13380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFY12_11345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFY12_07300 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFY12_06650 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFY12_08990 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFY12_06160 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PFY12_01105 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PFY12_11670 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PFY12_02850 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PFY12_13620 phage baseplate assembly protein V K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ccab02020]
D PFY12_11720 HAMP domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFY12_10525 HAMP domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFY12_04745 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PFY12_11135 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PFY12_00780 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PFY12_00750 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PFY12_00760 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PFY12_00765 K(+)-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PFY12_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PFY12_09040 response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PFY12_10270 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_15775 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D PFY12_05680 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PFY12_15735 c-type cytochrome K08738 CYC; cytochrome c
D PFY12_06590 ccoN; cytochrome-c oxidase, cbb3-type subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D PFY12_08395 ccoN; cytochrome-c oxidase, cbb3-type subunit I K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D PFY12_06595 c-type cytochrome K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PFY12_08405 c-type cytochrome K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PFY12_15755 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PFY12_15750 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
D PFY12_05505 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D PFY12_00010 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PFY12_07970 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PFY12_03485 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ccab02024]
D PFY12_15720 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PFY12_15715 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PFY12_04380 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_15280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_11655 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PFY12_12565 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PFY12_01845 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_06275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_13170 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_06650 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFY12_00325 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D PFY12_06980 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFY12_13380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFY12_11345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFY12_07300 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFY12_08990 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFY12_06160 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PFY12_01105 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PFY12_14985 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D PFY12_07425 OmpA family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ccab02040]
D PFY12_07425 OmpA family protein K02557 motB; chemotaxis protein MotB
D PFY12_02320 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
D PFY12_05680 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PFY12_11390 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ccab04980]
D PFY12_05110 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PFY12_08575 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D PFY12_08620 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_02730 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFY12_11550 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFY12_11540 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ccab01501]
D PFY12_11645 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PFY12_02905 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PFY12_02910 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PFY12_08885 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D PFY12_01490 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_02915 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_08880 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_03490 bla-A; CGA/CIA family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PFY12_06265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_13160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_02765 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01845 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_06275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_13170 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
D PFY12_10080 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFY12_10250 penicillin-binding transpeptidase domain-containing protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PFY12_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ccab01502]
D PFY12_12325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFY12_09465 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PFY12_04275 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PFY12_09130 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PFY12_09145 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ccab01503]
D PFY12_11115 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFY12_11135 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PFY12_00920 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PFY12_06265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_13160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_02765 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
D PFY12_05210 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ccab01000]
C 01001 Protein kinases [BR:ccab01001]
D PFY12_07970 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PFY12_11720 HAMP domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFY12_10525 HAMP domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFY12_00780 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PFY12_01960 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PFY12_09550 2TM domain-containing protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ccab01009]
D PFY12_04305 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PFY12_06535 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:ccab01002]
D PFY12_08200 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PFY12_03925 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PFY12_00110 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PFY12_11030 LysM peptidoglycan-binding domain-containing protein K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D PFY12_07410 C40 family peptidase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D PFY12_01860 C40 family peptidase K13695 nlpC; probable lipoprotein NlpC
D PFY12_02050 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PFY12_13115 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PFY12_13285 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PFY12_10915 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PFY12_04715 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PFY12_05725 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PFY12_12260 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PFY12_06240 M4 family metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D PFY12_14285 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PFY12_14290 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PFY12_10370 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PFY12_13385 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PFY12_13390 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PFY12_09865 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PFY12_13355 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PFY12_01380 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PFY12_04145 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PFY12_01165 M20/M25/M40 family metallo-hydrolase K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D PFY12_01170 M20/M25/M40 family metallo-hydrolase K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D PFY12_10585 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PFY12_11435 M48 family metallopeptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D PFY12_08810 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PFY12_02905 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PFY12_02910 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PFY12_08885 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D PFY12_11135 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PFY12_14110 S8 family serine peptidase K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D PFY12_08625 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PFY12_12200 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PFY12_13015 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PFY12_10540 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PFY12_02870 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PFY12_15525 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PFY12_15040 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PFY12_08485 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PFY12_14100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PFY12_09530 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PFY12_06170 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D PFY12_02875 pepE; dipeptidase PepE K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PFY12_09415 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PFY12_15815 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PFY12_03690 eco; serine protease inhibitor ecotin K08276 eco; ecotin
C 01003 Glycosyltransferases [BR:ccab01003]
D PFY12_10555 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PFY12_13105 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PFY12_00990 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PFY12_03720 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PFY12_10080 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFY12_07980 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ccab01005]
D PFY12_05210 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PFY12_07240 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PFY12_05215 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PFY12_05195 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PFY12_05220 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PFY12_05940 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PFY12_06850 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PFY12_01035 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PFY12_07395 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PFY12_02355 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PFY12_02455 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PFY12_09385 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PFY12_02845 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PFY12_07980 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PFY12_05380 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ccab01011]
D PFY12_06080 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PFY12_06130 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PFY12_09155 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PFY12_09135 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PFY12_09125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PFY12_09465 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PFY12_12325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFY12_12355 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PFY12_09415 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PFY12_09130 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PFY12_09145 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PFY12_15360 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFY12_00340 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFY12_10080 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFY12_10250 penicillin-binding transpeptidase domain-containing protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PFY12_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PFY12_02870 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PFY12_15525 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PFY12_03720 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PFY12_11030 LysM peptidoglycan-binding domain-containing protein K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D PFY12_10370 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PFY12_13650 lytic transglycosylase domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PFY12_00280 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PFY12_05240 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PFY12_11115 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFY12_13950 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ccab01004]
D PFY12_11035 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PFY12_00805 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_04190 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_08030 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_15835 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFY12_08150 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PFY12_07095 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_10470 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_08085 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFY12_08155 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_09490 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFY12_08115 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PFY12_05215 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PFY12_01310 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PFY12_14330 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D PFY12_01370 acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D PFY12_11545 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D PFY12_00385 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PFY12_00390 AMP-binding protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PFY12_04380 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_15280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_05675 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PFY12_12010 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ccab01006]
D PFY12_14000 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PFY12_03950 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PFY12_07960 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PFY12_06280 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PFY12_02540 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PFY12_14125 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:ccab01007]
D PFY12_04625 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PFY12_07615 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFY12_14210 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFY12_08210 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PFY12_11575 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PFY12_06620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFY12_00070 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PFY12_08180 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PFY12_05635 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PFY12_07365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFY12_15740 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PFY12_07285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFY12_05685 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PFY12_00965 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PFY12_10415 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PFY12_08430 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PFY12_15185 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PFY12_01980 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PFY12_15090 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFY12_13325 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PFY12_03520 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PFY12_01235 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_06120 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02460 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFY12_02990 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D PFY12_01890 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFY12_02385 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PFY12_15535 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PFY12_00845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PFY12_02175 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PFY12_01815 lat; L-lysine 6-transaminase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36]
D PFY12_07545 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D PFY12_00445 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFY12_05810 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFY12_02190 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PFY12_04780 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PFY12_00910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PFY12_01185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PFY12_00255 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PFY12_05485 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ccab00194]
D PFY12_02405 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PFY12_02410 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PFY12_01140 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PFY12_01135 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PFY12_01130 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PFY12_01125 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PFY12_01120 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PFY12_01115 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ccab03000]
D PFY12_12685 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PFY12_00030 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PFY12_03005 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PFY12_03365 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PFY12_04765 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PFY12_05080 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PFY12_08235 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PFY12_15885 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PFY12_02165 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PFY12_02775 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PFY12_11780 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D PFY12_06380 Lrp/AsnC ligand binding domain-containing protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PFY12_13215 Lrp/AsnC ligand binding domain-containing protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PFY12_02195 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PFY12_15225 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PFY12_15665 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PFY12_01675 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PFY12_05820 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PFY12_05555 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PFY12_06920 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PFY12_15465 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PFY12_05965 helix-turn-helix transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D PFY12_04465 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D PFY12_07735 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D PFY12_02285 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PFY12_01490 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_02915 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_08880 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_10575 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PFY12_07270 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D PFY12_14085 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFY12_07135 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D PFY12_05775 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D PFY12_08185 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PFY12_09105 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ccab03021]
D PFY12_11375 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PFY12_06935 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PFY12_06930 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PFY12_02320 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
D PFY12_05665 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PFY12_08515 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PFY12_03400 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PFY12_14215 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PFY12_05680 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PFY12_10995 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PFY12_07310 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PFY12_06975 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PFY12_08185 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PFY12_11960 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PFY12_10630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ccab03019]
D PFY12_13580 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PFY12_07100 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PFY12_15865 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PFY12_09425 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PFY12_00185 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PFY12_02085 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PFY12_14020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PFY12_13985 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFY12_02840 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFY12_06190 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFY12_11390 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFY12_14825 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PFY12_10630 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PFY12_06505 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PFY12_05000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PFY12_06725 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFY12_05005 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PFY12_04860 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:ccab03011]
D PFY12_15410 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PFY12_07680 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PFY12_11275 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PFY12_11370 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PFY12_11330 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PFY12_01055 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PFY12_11210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PFY12_11315 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PFY12_07685 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PFY12_11220 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PFY12_11365 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PFY12_11205 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PFY12_11360 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PFY12_11310 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PFY12_14815 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PFY12_05705 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PFY12_11290 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PFY12_01050 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PFY12_11265 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PFY12_11105 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PFY12_07065 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PFY12_07255 30S ribosomal protein THX K19033 PSRP4; 30S ribosomal protein S31
D PFY12_06960 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PFY12_11260 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PFY12_11245 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PFY12_11250 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PFY12_11305 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PFY12_11320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PFY12_01045 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PFY12_06955 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PFY12_06965 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PFY12_06950 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PFY12_07690 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PFY12_11295 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PFY12_11340 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PFY12_11280 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PFY12_11380 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PFY12_11325 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PFY12_15430 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PFY12_01925 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PFY12_08845 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PFY12_11270 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PFY12_11255 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PFY12_11300 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PFY12_08840 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PFY12_06145 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PFY12_11285 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PFY12_11335 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PFY12_07805 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PFY12_07530 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PFY12_06150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PFY12_07495 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PFY12_01930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PFY12_11355 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PFY12_10050 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PFY12_07870 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PFY12_07890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PFY12_07875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PFY12_12070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ccab03009]
D PFY12_07100 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PFY12_01410 era; GTPase Era K03595 era; GTPase
D PFY12_14050 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PFY12_08185 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D PFY12_10995 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PFY12_07310 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PFY12_06975 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PFY12_15345 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PFY12_13300 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PFY12_12360 RsmD family RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PFY12_13195 RsmE family RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PFY12_01245 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PFY12_09110 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PFY12_00015 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PFY12_09480 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PFY12_04565 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PFY12_09795 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PFY12_00355 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PFY12_15210 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D PFY12_03970 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PFY12_07210 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PFY12_02070 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PFY12_08365 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PFY12_12335 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PFY12_15375 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PFY12_05700 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PFY12_05245 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PFY12_13755 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PFY12_13580 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PFY12_12395 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PFY12_13985 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFY12_00870 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PFY12_05985 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D PFY12_09965 hflX; GTPase HflX K03665 hflX; GTPase
D PFY12_04870 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PFY12_00375 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PFY12_12590 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D PFY12_10990 rimP; ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D PFY12_10580 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D PFY12_09455 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D PFY12_07055 HPF/RaiA family ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor
D PFY12_03010 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D PFY12_07525 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ccab03016]
D PFY12_15315 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PFY12_08610 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PFY12_15185 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PFY12_08180 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PFY12_07365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFY12_00070 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PFY12_04625 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PFY12_06620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFY12_15740 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PFY12_07285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFY12_15090 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFY12_05685 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PFY12_10415 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PFY12_01980 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PFY12_08430 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PFY12_11575 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PFY12_05635 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PFY12_00965 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PFY12_13325 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PFY12_03520 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PFY12_14210 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFY12_08210 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PFY12_11950 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PFY12_11965 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PFY12_07670 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PFY12_06845 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PFY12_15365 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PFY12_14155 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFY12_04870 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PFY12_06280 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PFY12_04140 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PFY12_09450 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PFY12_05660 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D PFY12_07615 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFY12_10305 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PFY12_06370 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PFY12_08755 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PFY12_13055 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PFY12_06390 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PFY12_13190 RNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D PFY12_00350 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PFY12_07505 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PFY12_01710 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PFY12_11165 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PFY12_10420 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D PFY12_09595 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PFY12_10180 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D PFY12_08855 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PFY12_03980 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PFY12_05945 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PFY12_08535 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PFY12_14350 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PFY12_10565 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PFY12_09400 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PFY12_13205 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PFY12_15025 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PFY12_08715 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PFY12_09425 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PFY12_14825 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ccab03012]
D PFY12_01355 translation initiation factor K03113 EIF1; translation initiation factor 1
D PFY12_11000 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PFY12_01975 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PFY12_05920 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PFY12_07630 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PFY12_06990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PFY12_11215 fusA; elongation factor G K02355 fusA; elongation factor G
D PFY12_08635 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PFY12_01745 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PFY12_02940 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PFY12_10825 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PFY12_11350 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PFY12_05200 efp; elongation factor P K02356 efp; elongation factor P
D PFY12_15145 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PFY12_15300 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PFY12_08600 prfH; peptide chain release factor H K02839 prfH; peptide chain release factor
D PFY12_06565 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ccab03110]
D PFY12_11775 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PFY12_13645 ATP-dependent Clp protease ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PFY12_09605 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PFY12_11970 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PFY12_06535 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D PFY12_05000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PFY12_06725 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFY12_15165 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PFY12_04700 J domain-containing protein K05516 cbpA; curved DNA-binding protein
D PFY12_15170 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PFY12_13070 S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PFY12_06715 co-chaperone GroES K04078 groES; chaperonin GroES
D PFY12_11135 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PFY12_10585 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PFY12_01115 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PFY12_11595 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D PFY12_14110 S8 family serine peptidase K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D PFY12_15460 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PFY12_00920 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PFY12_08480 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PFY12_11770 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PFY12_11945 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PFY12_12820 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PFY12_12245 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PFY12_14325 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PFY12_01215 thioredoxin family protein K03671 TXN; thioredoxin
D PFY12_08795 thioredoxin family protein K03671 TXN; thioredoxin
D PFY12_14160 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:ccab04131]
D PFY12_00875 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PFY12_03260 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PFY12_06510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFY12_07110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFY12_06535 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D PFY12_02645 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ccab03051]
D PFY12_06535 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D PFY12_10315 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
C 03032 DNA replication proteins [BR:ccab03032]
D PFY12_10770 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PFY12_12685 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PFY12_05765 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PFY12_13585 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D PFY12_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PFY12_10775 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PFY12_14660 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PFY12_15035 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PFY12_00955 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PFY12_15245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFY12_03525 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFY12_00560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFY12_04245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFY12_01020 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_05850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_08780 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_00855 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFY12_06645 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PFY12_13685 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PFY12_13725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PFY12_02555 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PFY12_15760 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PFY12_02955 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PFY12_02965 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PFY12_04160 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PFY12_07995 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PFY12_04040 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ccab03036]
D PFY12_12685 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PFY12_07100 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PFY12_05765 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PFY12_13585 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D PFY12_04700 J domain-containing protein K05516 cbpA; curved DNA-binding protein
D PFY12_04695 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM
D PFY12_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PFY12_11195 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D PFY12_02195 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PFY12_15225 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PFY12_09165 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PFY12_07500 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D PFY12_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PFY12_01775 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PFY12_09160 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PFY12_09140 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D PFY12_15350 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PFY12_09170 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PFY12_15860 cell division protein ZapA K09888 zapA; cell division protein ZapA
D PFY12_11115 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFY12_06265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_13160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_02765 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_10235 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PFY12_10240 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PFY12_10255 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PFY12_14080 AAA family ATPase K03496 parA; chromosome partitioning protein
D PFY12_14085 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFY12_02955 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PFY12_02965 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PFY12_09450 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PFY12_01245 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PFY12_07060 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D PFY12_08255 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PFY12_05035 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PFY12_09430 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PFY12_09095 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ccab03400]
D PFY12_00530 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PFY12_04420 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PFY12_14310 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PFY12_09685 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PFY12_02315 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D PFY12_00900 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PFY12_01270 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PFY12_01755 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PFY12_09345 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PFY12_05080 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PFY12_01320 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PFY12_04205 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PFY12_03225 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PFY12_05235 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PFY12_11430 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFY12_13725 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PFY12_13685 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PFY12_01585 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PFY12_02590 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PFY12_08890 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PFY12_12165 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PFY12_13395 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFY12_06935 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PFY12_06930 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PFY12_11375 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PFY12_10815 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PFY12_09810 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PFY12_04430 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D PFY12_09215 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PFY12_15245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFY12_03525 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFY12_00560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFY12_04245 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFY12_01020 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_05850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_08780 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PFY12_00855 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFY12_00955 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PFY12_12680 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PFY12_06525 recA; recombinase RecA K03553 recA; recombination protein RecA
D PFY12_12035 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PFY12_07130 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PFY12_07745 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PFY12_15520 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PFY12_12220 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D PFY12_12225 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D PFY12_06665 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PFY12_03705 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PFY12_12980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PFY12_13370 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PFY12_08680 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PFY12_03045 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PFY12_08785 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PFY12_02555 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PFY12_15760 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PFY12_04160 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PFY12_07995 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PFY12_05765 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PFY12_13585 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D PFY12_14720 recombinase RecT K07455 recT; recombination protein RecT
D PFY12_02840 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFY12_06190 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFY12_06865 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PFY12_10375 DUF4113 domain-containing protein K03502 umuC; DNA polymerase V
D PFY12_05520 regulatory protein RecX K03565 recX; regulatory protein
D PFY12_05595 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PFY12_05585 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PFY12_07490 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ccab03029]
D PFY12_11000 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PFY12_01975 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PFY12_07630 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PFY12_06990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PFY12_11215 fusA; elongation factor G K02355 fusA; elongation factor G
D PFY12_01410 era; GTPase Era K03595 era; GTPase
D PFY12_14210 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFY12_07365 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFY12_07285 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFY12_10415 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PFY12_06620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFY12_00955 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PFY12_07955 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PFY12_05000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PFY12_15170 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PFY12_06725 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFY12_06715 co-chaperone GroES K04078 groES; chaperonin GroES
D PFY12_15165 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PFY12_14155 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFY12_13345 2Fe-2S iron-sulfur cluster-binding protein K22071 FDX2; ferredoxin-2, mitochondrial
D PFY12_06230 NifU family protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D PFY12_05035 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PFY12_06650 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFY12_11085 SCO family protein K07152 SCO1; protein SCO1
D PFY12_06535 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ccab02000]
D PFY12_10615 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PFY12_07315 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PFY12_06830 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PFY12_08940 peptidase domain-containing ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PFY12_15445 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PFY12_06410 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D PFY12_08475 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PFY12_08545 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PFY12_08550 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PFY12_04070 metQ; methionine ABC transporter substrate-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D PFY12_04065 methionine ABC transporter permease MetI K02072 metI; D-methionine transport system permease protein
D PFY12_04060 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D PFY12_15605 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D PFY12_15610 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D PFY12_15615 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PFY12_01685 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D PFY12_01680 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PFY12_10960 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D PFY12_10955 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PFY12_01765 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D PFY12_10570 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D PFY12_05135 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PFY12_15550 ABC transporter permease subunit K25151 gldF; gliding motility-associated transport system permease protein
D PFY12_03830 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D PFY12_15555 gldG; gliding motility-associated ABC transporter substrate-binding protein GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D PFY12_04680 FtsX-like permease family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PFY12_12585 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D PFY12_01510 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PFY12_15350 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PFY12_07500 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D PFY12_03675 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PFY12_08060 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PFY12_05160 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PFY12_15120 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D PFY12_05155 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PFY12_08055 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PFY12_08670 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PFY12_15125 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PFY12_00510 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PFY12_05565 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PFY12_05575 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PFY12_05580 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PFY12_10190 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PFY12_01445 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D PFY12_07260 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PFY12_01760 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PFY12_12005 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PFY12_02675 nucleoside permease K11537 xapB; MFS transporter, NHS family, xanthosine permease
D PFY12_00330 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PFY12_14230 MFS transporter K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D PFY12_04225 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PFY12_00045 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PFY12_02645 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D PFY12_05930 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D PFY12_15260 ion transporter K10716 kch; voltage-gated potassium channel
D PFY12_10020 ion channel K08715 IRPC; inward rectifier potassium channel
D PFY12_03910 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PFY12_04535 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PFY12_00060 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PFY12_04530 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PFY12_15945 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D PFY12_06440 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D PFY12_14805 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D PFY12_07425 OmpA family protein K02557 motB; chemotaxis protein MotB
D PFY12_07360 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PFY12_09710 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PFY12_09715 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D PFY12_04195 magnesium transporter CorA K03284 corA; magnesium transporter
D PFY12_09800 bestrophin family ion channel K08994 yneE; ion channel-forming bestrophin family protein
D PFY12_12435 bestrophin family ion channel K08994 yneE; ion channel-forming bestrophin family protein
D PFY12_03635 bestrophin family ion channel K08994 yneE; ion channel-forming bestrophin family protein
D PFY12_15230 bestrophin family ion channel K08994 yneE; ion channel-forming bestrophin family protein
D PFY12_13255 TMEM175 family protein K24915 TMEM175; TMEM175 potassium channel family protein
D PFY12_01155 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFY12_06185 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PFY12_11450 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PFY12_10065 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D PFY12_01590 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D PFY12_10500 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PFY12_13480 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PFY12_00050 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFY12_06420 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFY12_08300 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFY12_05910 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFY12_08995 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFY12_09005 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFY12_07005 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
D PFY12_01845 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_06275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_13170 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_05505 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D PFY12_07955 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PFY12_08700 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D PFY12_04255 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D PFY12_00705 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D PFY12_15200 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter
D PFY12_00720 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D PFY12_06995 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D PFY12_01395 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PFY12_04220 EamA family transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D PFY12_10010 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D PFY12_13885 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D PFY12_15775 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D PFY12_00370 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D PFY12_03630 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PFY12_09980 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D PFY12_12270 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PFY12_12275 NAD(P)H-dependent oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D PFY12_15000 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D PFY12_06460 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PFY12_01060 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PFY12_15890 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D PFY12_03845 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D PFY12_12775 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D PFY12_15175 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D PFY12_05530 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D PFY12_15510 AEC family transporter K24180 mleP; malate permease and related proteins
D PFY12_05825 KUP/HAK/KT family potassium transporter K03549 kup; KUP system potassium uptake protein
D PFY12_04515 MarC family protein K05595 marC; multiple antibiotic resistance protein
D PFY12_09140 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D PFY12_03260 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PFY12_07345 energy transducer TonB K03832 tonB; periplasmic protein TonB
D PFY12_01545 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D PFY12_00040 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PFY12_04230 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PFY12_07000 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D PFY12_06265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_13160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_02765 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_07970 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PFY12_11060 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PFY12_03575 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PFY12_00295 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D PFY12_09285 FeoA family protein K04758 feoA; ferrous iron transport protein A
D PFY12_09280 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PFY12_13720 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:ccab02044]
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
D PFY12_08250 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PFY12_13620 phage baseplate assembly protein V K11904 vgrG; type VI secretion system secreted protein VgrG
D PFY12_08990 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFY12_00325 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D PFY12_06980 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFY12_13380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFY12_11345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFY12_01105 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PFY12_06160 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PFY12_07300 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFY12_06650 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFY12_11670 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PFY12_02850 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ccab02042]
D PFY12_01155 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFY12_14985 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:ccab02022]
D PFY12_11720 HAMP domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFY12_10525 HAMP domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFY12_04745 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PFY12_00780 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PFY12_09040 response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PFY12_01960 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PFY12_09550 2TM domain-containing protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PFY12_14265 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D PFY12_00735 sigma-54 dependent transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
C 02035 Bacterial motility proteins [BR:ccab02035]
D PFY12_07425 OmpA family protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ccab04812]
D PFY12_10235 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PFY12_09170 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PFY12_09165 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PFY12_14080 AAA family ATPase K03496 parA; chromosome partitioning protein
D PFY12_14085 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ccab04147]
D PFY12_06535 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D PFY12_11390 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFY12_06510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFY12_09440 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFY12_07110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFY12_00920 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PFY12_01220 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PFY12_06725 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFY12_05000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PFY12_08525 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFY12_12200 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PFY12_13015 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PFY12_15400 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PFY12_07775 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PFY12_06990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PFY12_11965 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PFY12_04380 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_15280 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFY12_02650 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_10480 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFY12_04305 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PFY12_14055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PFY12_10140 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PFY12_00465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PFY12_00435 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PFY12_04895 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PFY12_13450 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PFY12_04635 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PFY12_00880 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PFY12_03870 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PFY12_00985 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PFY12_10270 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFY12_05145 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PFY12_13460 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PFY12_01180 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_08280 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_15940 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFY12_00100 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PFY12_02825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_03855 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PFY12_02685 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D PFY12_15050 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PFY12_14270 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:ccab02048]
D PFY12_03045 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PFY12_03040 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D PFY12_03050 type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D PFY12_12685 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PFY12_09170 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PFY12_10235 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PFY12_02955 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PFY12_02965 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PFY12_14155 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ccab04090]
D PFY12_12200 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PFY12_13015 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:ccab01504]
D PFY12_00330 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PFY12_02125 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PFY12_02905 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PFY12_02910 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PFY12_08885 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D PFY12_01490 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_02915 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_08880 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PFY12_03490 bla-A; CGA/CIA family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PFY12_06265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_13160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_02765 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PFY12_01845 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_06275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_13170 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D PFY12_00035 TolC family protein K12340 tolC; outer membrane protein
D PFY12_02770 TolC family protein K12340 tolC; outer membrane protein
D PFY12_04235 TolC family protein K12340 tolC; outer membrane protein
D PFY12_09655 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ccab03100]
D PFY12_07880 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFY12_03730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFY12_12740 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFY12_14165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFY12_06310 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PFY12_05990 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PFY12_11095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFY12_11110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFY12_09240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFY12_07025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFY12_07325 tRNA-His K14226 tRNA-His; tRNA His
D PFY12_07885 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PFY12_13085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFY12_13080 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFY12_11990 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFY12_12600 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PFY12_04650 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PFY12_13810 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFY12_00570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFY12_13180 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFY12_07020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFY12_06985 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PFY12_09640 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFY12_07890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PFY12_07875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PFY12_12070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PFY12_07870 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PFY12_02525 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D PFY12_05660 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D PFY12_07070 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PFY12_13545 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PFY12_08875 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PFY12_14130 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D PFY12_13525 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D PFY12_04840 namA; NADPH dehydrogenase NamA K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D PFY12_11700 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PFY12_04615 YpdA family putative bacillithiol disulfide reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D PFY12_09020 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PFY12_15110 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D PFY12_10435 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PFY12_01340 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PFY12_02795 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PFY12_01935 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PFY12_09680 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PFY12_03345 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PFY12_03410 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PFY12_06435 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PFY12_10490 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PFY12_15660 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PFY12_08665 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PFY12_00080 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PFY12_04050 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PFY12_13270 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PFY12_11600 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PFY12_03015 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PFY12_15910 arsenate reductase family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PFY12_09510 radical SAM protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D PFY12_03475 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PFY12_11880 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D PFY12_00450 N-acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D PFY12_02160 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D PFY12_06140 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PFY12_13540 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PFY12_03615 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D PFY12_09255 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PFY12_01870 glycosyltransferase K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370]
D PFY12_11640 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PFY12_06560 deoxyhypusine synthase family protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PFY12_09500 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PFY12_15955 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PFY12_08065 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PFY12_15980 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PFY12_05950 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PFY12_09855 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PFY12_02120 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PFY12_12390 phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PFY12_14015 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PFY12_04390 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D PFY12_00700 glycoside hydrolase family 13 protein K21575 susA; neopullulanase [EC:3.2.1.135]
D PFY12_10215 peptidoglycan recognition family protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFY12_12400 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PFY12_15635 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PFY12_08095 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PFY12_01460 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PFY12_07330 bshB1; bacillithiol biosynthesis deacetylase BshB1 K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D PFY12_11125 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PFY12_04555 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PFY12_11500 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PFY12_07705 methylmalonyl-CoA mutase family protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D PFY12_13555 Mur ligase family protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PFY12_11070 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PFY12_11025 bshC; bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D PFY12_02690 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PFY12_04355 VOC family protein K08234 yaeR; glyoxylase I family protein
D PFY12_01455 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PFY12_05755 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PFY12_00180 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D PFY12_00085 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PFY12_08495 DoxX family protein K15977 K15977; putative oxidoreductase
D PFY12_14200 alpha/beta hydrolase-fold protein K06999 K06999; phospholipase/carboxylesterase
D PFY12_09180 BrxA/BrxB family bacilliredoxin K26958 brxA_B; bacilliredoxin
D PFY12_02100 ytxJ; bacillithiol system redox-active protein YtxJ K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PFY12_04935 barstar family protein K03623 yhcO; ribonuclease inhibitor
D PFY12_03135 Tex family protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D PFY12_03515 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D PFY12_01160 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PFY12_05900 trigger factor K03545 tig; trigger factor
D PFY12_11445 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PFY12_09925 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D PFY12_11515 OsmC family protein K07397 yhfA; putative redox protein
D PFY12_13245 OsmC family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D PFY12_06545 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PFY12_01520 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PFY12_11170 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D PFY12_09410 YraN family protein K07460 yraN; putative endonuclease
D PFY12_04370 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PFY12_04930 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PFY12_05630 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PFY12_12215 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PFY12_10035 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D PFY12_15965 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PFY12_09885 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D PFY12_04875 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D PFY12_11855 transposase K07491 rayT; REP-associated tyrosine transposase
D PFY12_05440 transposase K07497 K07497; putative transposase
D PFY12_05445 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PFY12_14345 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D PFY12_09050 type I restriction endonuclease K07504 K07504; predicted type IV restriction endonuclease
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PFY12_00300 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PFY12_02605 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PFY12_03195 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PFY12_12990 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PFY12_13000 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PFY12_13005 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PFY12_13995 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D PFY12_11675 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D PFY12_12790 TerD family protein K05795 terD; tellurium resistance protein TerD
D PFY12_12805 TerD family protein K05791 terZ; tellurium resistance protein TerZ
D PFY12_03025 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D PFY12_00950 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D PFY12_01075 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D PFY12_08100 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D PFY12_07950 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D PFY12_06400 GH25 family lysozyme K07273 acm; lysozyme
D PFY12_03680 biotin/lipoyl-binding protein K01993 ABC-2.TX; HlyD family secretion protein
D PFY12_05560 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D PFY12_00690 SusE domain-containing protein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D PFY12_15495 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D PFY12_01015 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D PFY12_15625 hemin-degrading factor K07225 hmuS; putative hemin transport protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PFY12_09090 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D PFY12_11850 transferase hexapeptide repeat family protein K02617 paaY; phenylacetic acid degradation protein
D PFY12_05055 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PFY12_09895 tRNA-binding protein K06878 K06878; tRNA-binding protein
D PFY12_10015 group III truncated hemoglobin K06886 glbN; hemoglobin
D PFY12_03840 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PFY12_07485 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PFY12_09460 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PFY12_01425 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PFY12_08215 YjjG family noncanonical pyrimidine nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D PFY12_12780 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PFY12_10185 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PFY12_10195 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PFY12_06610 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D PFY12_00365 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D PFY12_09620 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D PFY12_11140 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PFY12_03305 VOC family protein K04750 phnB; PhnB protein
D PFY12_03645 VOC family protein K04750 phnB; PhnB protein
D PFY12_06090 LemA family protein K03744 lemA; LemA protein
D PFY12_12290 LemA family protein K03744 lemA; LemA protein
D PFY12_09660 SprT-like domain-containing protein K02742 sprT; SprT protein
D PFY12_08205 YdcF family protein K03748 sanA; SanA protein
D PFY12_01700 YdcF family protein K03748 sanA; SanA protein
D PFY12_15150 VTT domain-containing protein K03975 dedA; membrane-associated protein
D PFY12_04015 phage holin family protein K08972 K08972; putative membrane protein
D PFY12_13490 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D PFY12_12250 YchJ family protein K09858 K09858; SEC-C motif domain protein
D PFY12_13310 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
D PFY12_15105 DUF417 family protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D PFY12_04770 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D PFY12_06900 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D PFY12_12280 TPM domain-containing protein K06872 K06872; uncharacterized protein
D PFY12_05225 HD domain-containing protein K06885 K06885; uncharacterized protein
D PFY12_13430 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D PFY12_10025 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D PFY12_05615 HD domain-containing protein K06950 K06950; uncharacterized protein
D PFY12_12550 zinc metallopeptidase K06973 K06973; uncharacterized protein
D PFY12_13240 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PFY12_03375 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PFY12_04055 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PFY12_11470 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PFY12_05070 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D PFY12_08020 MMPL family transporter K07003 K07003; uncharacterized protein
D PFY12_03325 VOC family protein K07032 K07032; uncharacterized protein
D PFY12_03330 VOC family protein K07032 K07032; uncharacterized protein
D PFY12_10170 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D PFY12_00940 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D PFY12_14855 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D PFY12_14850 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D PFY12_04340 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PFY12_15470 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PFY12_15580 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PFY12_01345 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D PFY12_12375 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D PFY12_15830 metallophosphoesterase K07098 K07098; uncharacterized protein
D PFY12_15480 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D PFY12_15485 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D PFY12_12835 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D PFY12_15275 hypothetical protein K07164 K07164; uncharacterized protein
D PFY12_15960 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D PFY12_02680 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D PFY12_03340 DUF763 domain-containing protein K09003 K09003; uncharacterized protein
D PFY12_09175 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D PFY12_12930 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D PFY12_12760 hypothetical protein K09776 K09776; uncharacterized protein
D PFY12_11185 YciI family protein K09780 K09780; uncharacterized protein
D PFY12_15160 DUF808 family protein K09781 K09781; uncharacterized protein
D PFY12_08420 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D PFY12_04410 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D PFY12_11620 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D PFY12_14250 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D PFY12_02785 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein
D PFY12_02935 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D PFY12_01605 YegP family protein K09946 K09946; uncharacterized protein
D PFY12_09045 YegP family protein K09946 K09946; uncharacterized protein
D PFY12_08895 DUF3820 family protein K09954 K09954; uncharacterized protein
D PFY12_10220 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein
D PFY12_13990 DUF47 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024