+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Cajanus cajan (pigeon pea)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 109798039 mRNA cap guanine-N7 methyltransferase 2 isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 109813294 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 109817893 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 109815064 mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 109788592 mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 109801343 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 109803552 cyclin-dependent kinase D-3 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E 109801952 uncharacterized protein LOC109801952 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 109810334 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 109805856 pre-mRNA cleavage factor Im 25 kDa subunit 2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 109803665 pre-mRNA cleavage factor Im 25 kDa subunit 1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 109813105 cleavage and polyadenylation specificity factor subunit CG7185 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 109813111 cleavage and polyadenylation specificity factor subunit CG7185 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 109815121 uncharacterized protein LOC109815121 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 109807370 polyadenylation and cleavage factor homolog 4 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 109796603 uncharacterized protein LOC109796603 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 109796801 polyadenylation and cleavage factor homolog 4 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 109803394 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 109800948 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 109803884 cleavage and polyadenylation specificity factor subunit 3-I K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 109788935 30-kDa cleavage and polyadenylation specificity factor 30 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 109814307 uncharacterized protein LOC109814307 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 109789791 flowering time control protein FY K15542 PFS2; polyadenylation factor subunit 2
E 109801187 protein ANTHESIS POMOTING FACTOR 1 K14962 WDR82; COMPASS component SWD2
E 109808645 protein ANTHESIS POMOTING FACTOR 1 K14962 WDR82; COMPASS component SWD2
E 109805064 serine/threonine-protein phosphatase PP1 isozyme 3 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109805963 serine/threonine-protein phosphatase PP1 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109788037 serine/threonine-protein phosphatase PP1 isozyme 4 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109796190 serine/threonine-protein phosphatase PP1 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109788363 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109797211 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109793574 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109792316 serine/threonine-protein phosphatase PP1 isoform X2 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109787741 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 109813309 cleavage stimulation factor subunit 50 isoform X1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 109812194 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 109790158 cleavage stimulation factor subunit 77 isoform X2 K14408 CSTF3; cleavage stimulation factor subunit 3
E 109809450 uncharacterized protein LOC109809450 isoform X1 K06100 SYMPK; symplekin
E 109816666 symplekin isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 109810629 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 109799639 small nuclear ribonucleoprotein SmD3b K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 109798992 small nuclear ribonucleoprotein SmD3b K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 109808947 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 109804227 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 109816254 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 109813744 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 109797504 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 109801431 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 109800948 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 109803884 cleavage and polyadenylation specificity factor subunit 3-I K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 109812194 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 109809450 uncharacterized protein LOC109809450 isoform X1 K06100 SYMPK; symplekin
E 109816666 symplekin isoform X1 K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E 109802443 transcription elongation factor SPT4 homolog 1 K15171 SUPT4H1; transcription elongation factor SPT4
E 109815609 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 109796915 N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 109806648 N6-adenosine-methyltransferase non-catalytic subunit MTB K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 109812802 RNA N6-adenosine-methyltransferase mettl16 isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 109796750 FKBP12-interacting protein of 37 kDa isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 109807646 FKBP12-interacting protein of 37 kDa K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 109796103 uncharacterized protein LOC109796103 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 109815071 E3 ubiquitin-protein ligase HAKAI homolog K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 109803430 nuclear poly(A) polymerase 1 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109804332 nuclear poly(A) polymerase 3 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109800197 nuclear poly(A) polymerase 1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109807903 nuclear poly(A) polymerase 4 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109797755 nuclear poly(A) polymerase 4 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 109816401 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 109804564 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 109791206 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 109807812 zinc finger CCCH domain-containing protein 41 K13192 RBM26; RNA-binding protein 26
E 109803679 RNA demethylase ALKBH9B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 109795704 RNA demethylase ALKBH10B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 109818090 RNA demethylase ALKBH9B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 109795864 RNA demethylase ALKBH10B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D 109804926 KIN17-like protein K13102 KIN; DNA/RNA-binding protein KIN17
D 109788480 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 109788488 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 109805753 serrate RNA effector molecule K27103 SRRT; serrate RNA effector molecule
D 109789721 serrate RNA effector molecule isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 109810924 RNA-binding protein Y14 K12876 RBM8A; RNA-binding protein 8A
E 109815368 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 109801122 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 109789493 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 109789494 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 109812428 THO complex subunit 4B K12881 THOC4; THO complex subunit 4
E 109798612 THO complex subunit 4A K12881 THOC4; THO complex subunit 4
E 109793429 THO complex subunit 4D K12881 THOC4; THO complex subunit 4
E 109809212 DEAD-box ATP-dependent RNA helicase 56 isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 109817662 DEAD-box ATP-dependent RNA helicase 56 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 109804009 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 109796317 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 109803115 pinin K13114 PNN; pinin
E 109789528 actin cytoskeleton-regulatory complex protein PAN1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 109813619 serine/arginine-rich splicing factor SR45 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 109816303 serine/arginine repetitive matrix protein 1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 109818744 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 109803439 THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 109797702 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 109812428 THO complex subunit 4B K12881 THOC4; THO complex subunit 4
E 109798612 THO complex subunit 4A K12881 THOC4; THO complex subunit 4
E 109793429 THO complex subunit 4D K12881 THOC4; THO complex subunit 4
E 109791251 THO complex subunit 5A K13174 THOC5; THO complex subunit 5
E 109802102 THO complex subunit 5B K13174 THOC5; THO complex subunit 5
E 109790345 THO complex subunit 7A K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 109790474 enhanced ethylene response protein 5 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 109818067 protein DSS1 HOMOLOG ON CHROMOSOME V K10881 SHFM1; 26 proteasome complex subunit DSS1
E 109792699 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 109818946 SAC3 family protein C K23719 SAC3; nuclear mRNA export protein SAC3
E 109815087 SAC3 family protein B K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E 109804893 protein RAE1 isoform X1 K14298 RAE1; mRNA export factor
E 109816539 protein RAE1 K14298 RAE1; mRNA export factor
E 109811265 protein transport protein SEC13 homolog B K14004 SEC13; protein transport protein SEC13
E 109816823 protein transport protein SEC13 homolog B K14004 SEC13; protein transport protein SEC13
E 109792175 nuclear pore complex protein NUP85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 109811865 nuclear pore complex protein NUP43 K14305 NUP43; nuclear pore complex protein Nup43
E 109799801 uncharacterized protein LOC109799801 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 109796196 nuclear pore complex protein NUP54 K14308 NUP54; nuclear pore complex protein Nup54
E 109790458 nuclear pore complex protein NUP62 isoform X1 K14306 NUP62; nuclear pore complex protein Nup62
E 109797078 nuclear pore complex protein NUP88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 109805778 nuclear pore complex protein NUP93A isoform X2 K14309 NUP93; nuclear pore complex protein Nup93
E 109807570 nuclear pore complex protein NUP98A K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 109814337 nuclear pore complex protein NUP96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 109819132 nuclear pore complex protein NUP107 K14301 NUP107; nuclear pore complex protein Nup107
E 109813740 nuclear pore complex protein NUP133 K14300 NUP133; nuclear pore complex protein Nup133
E 109788542 uncharacterized protein LOC109788542 isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 109803261 nuclear pore complex protein NUP155 K14312 NUP155; nuclear pore complex protein Nup155
E 109789323 nuclear pore complex protein NUP160 isoform X1 K14303 NUP160; nuclear pore complex protein Nup160
E 109806816 nuclear pore complex protein NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 109798423 nuclear pore complex protein NUP205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 109807801 nuclear pore complex protein GP210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 109812924 nuclear pore complex protein NUP214 K14317 NUP214; nuclear pore complex protein Nup214
E 109801638 nuclear pore complex protein NUP58 K14307 NUPL1; nucleoporin p58/p45
E 109798293 zinc finger CCCH domain-containing protein 46 K14321 NUPL2; nucleoporin-like protein 2
E 109816411 uncharacterized protein LOC109816411 K14315 NDC1; nucleoporin NDC1
E 109801163 protein SEH1 K14299 SEH1; nucleoporin SEH1
E 109801790 LOW QUALITY PROTEIN: aladin K14320 AAAS; aladin
E 109808476 protein GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E 109812112 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 109815489 GTP-binding nuclear protein Ran1B-like K07936 RAN; GTP-binding nuclear protein Ran
E 109815491 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 109815492 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 109815493 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 109790544 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 109790546 GTP-binding nuclear protein Ran1B K07936 RAN; GTP-binding nuclear protein Ran
E 109815983 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 109815993 uncharacterized protein LOC109815993 K07936 RAN; GTP-binding nuclear protein Ran
E 109816568 plant UBX domain-containing protein 10 K18726 FAF2; FAS-associated factor 2
E 109797423 plant UBX domain-containing protein 10 K18726 FAF2; FAS-associated factor 2
E 109798607 plant UBX domain-containing protein 9 K18726 FAF2; FAS-associated factor 2
E 109796588 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 109808141 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 109811596 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 109798889 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 109813568 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 109810365 EEF1A lysine methyltransferase 3 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 109798287 protein N-lysine methyltransferase METTL21A K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 109798780 protein EXPORTIN 1A K14290 XPO1; exportin-1
E 109810867 protein EXPORTIN 1A isoform X1 K14290 XPO1; exportin-1
E 109810167 exportin-7-B isoform X1 K18460 XPO7; exportin-7
E 109806327 exportin-7-A K18460 XPO7; exportin-7
E 109795184 RAN GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 109795009 RAN GTPase-activating protein 2 isoform X1 K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 109803542 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E
E 109803548 eukaryotic translation initiation factor NCBP isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109809557 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E
E 109802393 eukaryotic initiation factor 4A-10 K03257 EIF4A; translation initiation factor 4A
E 109807344 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 109804423 eukaryotic initiation factor 4A-10 K03257 EIF4A; translation initiation factor 4A
E 109808352 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 109805655 eukaryotic initiation factor 4A-10 K03257 EIF4A; translation initiation factor 4A
E 109799771 ATP-dependent RNA helicase eIF4A isoform X1 K03257 EIF4A; translation initiation factor 4A
E 109796658 eukaryotic initiation factor 4A-11 K03257 EIF4A; translation initiation factor 4A
E 109811851 eukaryotic translation initiation factor isoform X1 K03260 EIF4G; translation initiation factor 4G
E 109790202 eukaryotic translation initiation factor 4G K03260 EIF4G; translation initiation factor 4G
E 109793590 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 109805817 eukaryotic translation initiation factor 4G K03260 EIF4G; translation initiation factor 4G
E 109797604 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 109812120 DEAD-box ATP-dependent RNA helicase 52B K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109815125 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109808732 DEAD-box ATP-dependent RNA helicase 37 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109791230 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109791231 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109791232 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109818285 uncharacterized protein LOC109818285 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 109789866 30S ribosomal protein 2, chloroplastic K13126 PABPC; polyadenylate-binding protein
E 109792560 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 109814298 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 109803977 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 109798038 polyadenylate-binding protein 7 K13126 PABPC; polyadenylate-binding protein
E 109816141 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 109812196 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 109805820 DExH-box ATP-dependent RNA helicase DExH11 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 109808700 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 109806710 translation machinery-associated protein 22 K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 109790007 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 109808383 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109802144 glycine-rich RNA-binding protein 2, mitochondrial K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109818920 heterogeneous nuclear ribonucleoprotein A1-like 2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109788074 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109801884 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109806572 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109806583 heterogeneous nuclear ribonucleoprotein 1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109811701 heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109807837 glycine-rich RNA-binding protein 3, mitochondrial K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109797458 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 114916420 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109813053 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 109801316 RNA-binding protein Musashi homolog 2 K14411 MSI; RNA-binding protein Musashi
E 109804860 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 109805906 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 109809186 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 109814348 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 109797079 RNA-binding protein 1 K14411 MSI; RNA-binding protein Musashi
E 109803897 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 109789657 elongation factor 1-alpha isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 109797920 protein PELOTA 1-like K06965 PELO; protein pelota
E 109817884 protein PELOTA 1 K06965 PELO; protein pelota
E 109805111 polyadenylate-binding protein 1 K14396 PABPN1; polyadenylate-binding protein 2
E 109810230 polyadenylate-binding protein 1 K14396 PABPN1; polyadenylate-binding protein 2
E 109805215 polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 109813497 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 109804195 polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 109797720 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 109788135 DEAD-box ATP-dependent RNA helicase 38 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 109803534 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 109797834 protein MODIFIER OF SNC1 11 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 109795425 transcription factor Pur-alpha 1 K21772 PURA; transcriptional activator protein Pur-alpha
E 109815122 SAC3 family protein A isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 109810315 eukaryotic peptide chain release factor subunit 1-3 K03265 ETF1; peptide chain release factor subunit 1
E 109803306 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 109815524 regulator of nonsense transcripts UPF2 K14327 UPF2; regulator of nonsense transcripts 2
E 109819121 regulator of nonsense transcripts UPF3 K14328 UPF3; regulator of nonsense transcripts 3
E 109803386 regulator of nonsense transcripts UPF3 isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 109800249 serine/threonine-protein phosphatase PP2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109813418 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109799385 serine/threonine-protein phosphatase PP2A catalytic subunit isoform X1 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109796172 serine/threonine-protein phosphatase PP2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109796566 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 109788205 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 109793156 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 109807780 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109805622 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109811769 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109817304 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109796098 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109808872 LOW QUALITY PROTEIN: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109789678 serine/threonine protein phosphatase 2A regulatory subunit B''beta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109811210 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109810061 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109805972 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109818221 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109796087 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X2 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109796632 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109788617 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109796802 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109796880 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109796925 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109795885 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109808565 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109810680 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109818775 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 109800002 LOW QUALITY PROTEIN: uncharacterized protein LOC109800002 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 109792439 protein SMG7 K14409 SMG7; protein SMG7
E 109789802 protein SMG7 K14409 SMG7; protein SMG7
E 109811592 uncharacterized protein LOC109811592 isoform X1 K18734 SMG8; protein SMG8
E 109810941 protein SMG9 K18735 SMG9; protein SMG9
E 109818285 uncharacterized protein LOC109818285 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E 109808897 pumilio homolog 24 isoform X1 K14844 PUF6; pumilio homology domain family member 6
E 109797480 myosin-6 K10357 MYO5; myosin V
E 109806403 myosin-15 isoform X1 K10357 MYO5; myosin V
E 109806434 myosin-11 isoform X3 K10357 MYO5; myosin V
E 109805816 myosin-2 isoform X1 K10357 MYO5; myosin V
E 109812054 myosin-9 isoform X1 K10357 MYO5; myosin V
E 109816119 myosin-15 isoform X1 K10357 MYO5; myosin V
E 109818124 myosin-6 K10357 MYO5; myosin V
E 109796005 myosin-7 K10357 MYO5; myosin V
E 109817134 myosin-2 K10357 MYO5; myosin V
E 109817158 myosin-12 K10357 MYO5; myosin V
E 109818194 myosin-11 isoform X1 K10357 MYO5; myosin V
E 109808824 myosin-17 K10357 MYO5; myosin V
E 109818633 myosin-1 K10357 MYO5; myosin V
E 109805007 protein RRP6-like 3 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E 109810839 far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 109795873 far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein
E 109795874 far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 109807297 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 109807303 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 109818360 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 109816538 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 109802028 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 109811399 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 109804216 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 109790530 probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
D Other mRNA localization factors
E 109797604 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 109808226 RNA-binding KH domain-containing protein PEPPER K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109813548 flowering locus K homology domain K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109805091 RNA-binding KH domain-containing protein RCF3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109802288 poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109804438 RNA-binding KH domain-containing protein PEPPER K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109804952 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109809350 flowering locus K homology domain K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109819264 KH domain-containing protein At4g18375 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109796842 flowering locus K homology domain isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109800803 KH domain-containing protein At4g18375 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109801876 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109816990 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109801891 KH domain-containing protein At4g18375 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109804036 KH domain-containing protein HEN4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109797331 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 109788706 protein argonaute 16 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109789150 protein argonaute 2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109793131 LOW QUALITY PROTEIN: protein argonaute 10-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109792837 protein argonaute 10 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109819308 protein argonaute 2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109805933 protein argonaute PNH1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109798401 protein argonaute 5 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109799425 protein argonaute 4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109812128 protein argonaute PNH1 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109815423 protein argonaute 4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109802284 protein argonaute 7 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109806275 protein argonaute 4B K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109803428 protein argonaute 1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109803542 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E
E 109803548 eukaryotic translation initiation factor NCBP isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109809557 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E
E 109812120 DEAD-box ATP-dependent RNA helicase 52B K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109815125 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109808732 DEAD-box ATP-dependent RNA helicase 37 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109791230 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109791231 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109791232 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109813396 DEAD-box ATP-dependent RNA helicase 8 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109802047 DEAD-box ATP-dependent RNA helicase 8 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109810590 protein decapping 5 K18749 LSM14; protein LSM14
E 109810623 protein decapping 5 K18749 LSM14; protein LSM14
E 109808630 decapping 5-like protein K18749 LSM14; protein LSM14
E 109813844 protein decapping 5 K18749 LSM14; protein LSM14
E 109810876 probable RNA helicase SDE3 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 109796105 transportin-1 K18752 TNPO1; transportin-1
E 109800002 LOW QUALITY PROTEIN: uncharacterized protein LOC109800002 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 109792439 protein SMG7 K14409 SMG7; protein SMG7
E 109789802 protein SMG7 K14409 SMG7; protein SMG7
E 109813077 zinc finger CCCH domain-containing protein 15 K18753 ZFP36L; butyrate response factor
E 109805155 putative protein TPRXL K18753 ZFP36L; butyrate response factor
E 109808383 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109802144 glycine-rich RNA-binding protein 2, mitochondrial K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109818920 heterogeneous nuclear ribonucleoprotein A1-like 2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109788074 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109801884 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109806572 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109806583 heterogeneous nuclear ribonucleoprotein 1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109811701 heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109807837 glycine-rich RNA-binding protein 3, mitochondrial K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109797458 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 114916420 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109814094 la-related protein 1A K18757 LARP1; la-related protein 1
E 109800157 la-related protein 1C K18757 LARP1; la-related protein 1
E 109815671 la-related protein 1C K18757 LARP1; la-related protein 1
E 109788453 la-related protein 1C K18757 LARP1; la-related protein 1
E 109791588 la-related protein 1C K18757 LARP1; la-related protein 1
D P-body specific factors
E 109812349 mRNA-decapping enzyme subunit 2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 109814000 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 109817344 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 109809122 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 109812598 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 109798163 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 109817296 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 109791789 sm-like protein LSM4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 109812245 sm-like protein LSM4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 109813241 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 109801818 sm-like protein LSM6A K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 109810696 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 109813612 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 109797480 myosin-6 K10357 MYO5; myosin V
E 109806403 myosin-15 isoform X1 K10357 MYO5; myosin V
E 109806434 myosin-11 isoform X3 K10357 MYO5; myosin V
E 109805816 myosin-2 isoform X1 K10357 MYO5; myosin V
E 109812054 myosin-9 isoform X1 K10357 MYO5; myosin V
E 109816119 myosin-15 isoform X1 K10357 MYO5; myosin V
E 109818124 myosin-6 K10357 MYO5; myosin V
E 109796005 myosin-7 K10357 MYO5; myosin V
E 109817134 myosin-2 K10357 MYO5; myosin V
E 109817158 myosin-12 K10357 MYO5; myosin V
E 109818194 myosin-11 isoform X1 K10357 MYO5; myosin V
E 109808824 myosin-17 K10357 MYO5; myosin V
E 109818633 myosin-1 K10357 MYO5; myosin V
E 109796154 tubulin alpha-1 chain K07374 TUBA; tubulin alpha
E 109797116 tubulin alpha chain K07374 TUBA; tubulin alpha
E 109793287 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 109799618 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 109803473 tubulin alpha-5 chain K07374 TUBA; tubulin alpha
E 109794612 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 109815037 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 109794028 LOW QUALITY PROTEIN: tubulin alpha-2 chain-like K07374 TUBA; tubulin alpha
E 109815109 tubulin alpha-4 chain K07374 TUBA; tubulin alpha
E 109810531 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 109812609 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 109798481 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 109787755 CCR4-NOT transcription complex subunit 3 isoform X2 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109801987 LOW QUALITY PROTEIN: general negative regulator of transcription subunit 3-like K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109799122 uncharacterized protein LOC109799122 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 109808041 uncharacterized protein LOC109808041 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 109815308 carbon catabolite repressor protein 4 homolog 1 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109815820 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109796834 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109788753 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109789461 probable CCR4-associated factor 1 homolog 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109798938 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109813981 probable CCR4-associated factor 1 homolog 9 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109789502 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109816833 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 109813595 protein PAT1 homolog isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 109813597 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 109794072 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 109804186 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 109801005 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 109815524 regulator of nonsense transcripts UPF2 K14327 UPF2; regulator of nonsense transcripts 2
E 109819121 regulator of nonsense transcripts UPF3 K14328 UPF3; regulator of nonsense transcripts 3
E 109803386 regulator of nonsense transcripts UPF3 isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 109790467 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 109810991 YTH domain-containing protein ECT2 K20102 YTHDF; YTH domain-containing family protein
E 109804551 YTH domain-containing protein ECT2 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 109802461 YTH domain-containing protein ECT4 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 109792067 YTH domain-containing protein ECT4 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 109789619 YTH domain-containing protein ECT4 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 109803914 YTH domain-containing protein ECT4 K20102 YTHDF; YTH domain-containing family protein
E 109808477 YTH domain-containing protein ECT1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 109808432 oligouridylate-binding protein 1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 109812613 oligouridylate-binding protein 1B K13201 TIA1; nucleolysin TIA-1/TIAR
E 109790245 oligouridylate-binding protein 1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 109789866 30S ribosomal protein 2, chloroplastic K13126 PABPC; polyadenylate-binding protein
E 109792560 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 109814298 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 109803977 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 109798038 polyadenylate-binding protein 7 K13126 PABPC; polyadenylate-binding protein
E 109816141 polyadenylate-binding protein 2 K13126 PABPC; polyadenylate-binding protein
E 109812196 polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 109808369 ras GTPase-activating protein-binding protein 1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 109803347 ras GTPase-activating protein-binding protein 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 109801724 ras GTPase-activating protein-binding protein 1 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 109806920 putative G3BP-like protein isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 109813078 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 109791369 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 109802393 eukaryotic initiation factor 4A-10 K03257 EIF4A; translation initiation factor 4A
E 109807344 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 109804423 eukaryotic initiation factor 4A-10 K03257 EIF4A; translation initiation factor 4A
E 109808352 eukaryotic initiation factor 4A-8 K03257 EIF4A; translation initiation factor 4A
E 109805655 eukaryotic initiation factor 4A-10 K03257 EIF4A; translation initiation factor 4A
E 109799771 ATP-dependent RNA helicase eIF4A isoform X1 K03257 EIF4A; translation initiation factor 4A
E 109796658 eukaryotic initiation factor 4A-11 K03257 EIF4A; translation initiation factor 4A
E 109804009 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 109811851 eukaryotic translation initiation factor isoform X1 K03260 EIF4G; translation initiation factor 4G
E 109790202 eukaryotic translation initiation factor 4G K03260 EIF4G; translation initiation factor 4G
E 109793590 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 109805817 eukaryotic translation initiation factor 4G K03260 EIF4G; translation initiation factor 4G
E 109799457 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 109818224 tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 109814000 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 109817344 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 109812349 mRNA-decapping enzyme subunit 2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 109813396 DEAD-box ATP-dependent RNA helicase 8 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109802047 DEAD-box ATP-dependent RNA helicase 8 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109804186 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 109801005 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 109813595 protein PAT1 homolog isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 109813597 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 109794072 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 109809122 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 109812598 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 109798163 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 109817296 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 109791789 sm-like protein LSM4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 109812245 sm-like protein LSM4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 109813241 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 109801818 sm-like protein LSM6A K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 109810696 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 109813612 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 109789272 5'-3' exoribonuclease 3 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 109796112 5'-3' exoribonuclease 4 K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
E 109815355 5'-3' exoribonuclease 4 isoform X2 K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E 109817091 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 109797075 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 109801486 putative exosome complex component rrp40 isoform X1 K03681 RRP40; exosome complex component RRP40
E 109795703 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 109811951 exosome complex component RRP41 homolog isoform X2 K11600 RRP41; exosome complex component RRP41
E 109802232 exosome complex exonuclease RRP46 homolog K12590 RRP46; exosome complex component RRP46
E 109798858 exosome complex component RRP41-like K12587 MTR3; exosome complex component MTR3
E 109817725 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 109814300 exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 109793383 exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 109810869 exosome complex component RRP45A isoform X1 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 109788715 exosome complex exonuclease RRP44 homolog A isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 109801435 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 109795936 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 109817086 nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 109795550 nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 109805529 uncharacterized protein LOC109805529 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 109806564 terminal nucleotidyltransferase 4A K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 109799440 LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 109801935 DExH-box ATP-dependent RNA helicase DExH9 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 109805820 DExH-box ATP-dependent RNA helicase DExH11 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 109790372 tetratricopeptide repeat protein SKI3 isoform X2 K12600 SKI3; superkiller protein 3
E 109808362 WD repeat-containing protein VIP3 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 109815308 carbon catabolite repressor protein 4 homolog 1 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109815820 carbon catabolite repressor protein 4 homolog 4 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109812609 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 109798481 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 109787755 CCR4-NOT transcription complex subunit 3 isoform X2 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109801987 LOW QUALITY PROTEIN: general negative regulator of transcription subunit 3-like K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109799122 uncharacterized protein LOC109799122 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 109808041 uncharacterized protein LOC109808041 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 109796834 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109788753 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109789461 probable CCR4-associated factor 1 homolog 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109798938 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109813981 probable CCR4-associated factor 1 homolog 9 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109789502 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109811269 CCR4-NOT transcription complex subunit 9 isoform X2 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 109806755 CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 109816547 CCR4-NOT transcription complex subunit 10 isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 109804726 ABC transporter I family member 21 K12608 CAF16; CCR4-NOT complex subunit CAF16
E 109795045 ABC transporter I family member 20 K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E 109813132 poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 109809507 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 109814086 DExH-box ATP-dependent RNA helicase DExH6 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109803406 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109806931 DExH-box ATP-dependent RNA helicase DExH6 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109814476 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109800071 DExH-box ATP-dependent RNA helicase DExH1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109803218 DExH-box ATP-dependent RNA helicase DExH1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109811726 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109790441 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109809861 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109816786 uncharacterized protein LOC109816786 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 109812101 protein NRDE2 homolog isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2
E 109807624 protein RST1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 109808219 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 109789190 uncharacterized protein LOC109789190 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 109817376 cytosolic enolase 3 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109797649 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109792602 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109800020 enolase 1, chloroplastic K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109801946 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 109809666 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 109811331 ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109805226 ATP-dependent 6-phosphofructokinase 4, chloroplastic K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109808294 ATP-dependent 6-phosphofructokinase 3 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109801373 ATP-dependent 6-phosphofructokinase 5, chloroplastic K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109818373 ATP-dependent 6-phosphofructokinase 5, chloroplastic isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109796204 ATP-dependent 6-phosphofructokinase 6 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109804172 ATP-dependent 6-phosphofructokinase 3 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109799663 ATP-dependent 6-phosphofructokinase 3 isoform X2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109807871 ATP-dependent 6-phosphofructokinase 6 isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 109808436 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 109808690 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 109806905 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 109808344 chaperonin CPN60-like 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 109815627 chaperonin CPN60-2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 109805251 chaperonin CPN60-2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 109805805 ruBisCO large subunit-binding protein subunit beta, chloroplastic K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 109789882 chaperonin 60 subunit beta 4, chloroplastic isoform X2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 109797075 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 109817091 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 109795703 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 109811951 exosome complex component RRP41 homolog isoform X2 K11600 RRP41; exosome complex component RRP41
E 109817725 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024