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Transfer RNA Biogenesis - Cyprinus carpio (common carp)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 109074444 pop1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 109093339 ribonuclease P protein subunit p29-like K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 109095351 pop5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 109059051 ribonuclease P protein subunit p30-like isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 109099502 rpp30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 109047275 ribonuclease P protein subunit p21 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D 122141717 ribonuclease P protein subunit p21-like isoform X1 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D 109063374 ribonuclease P protein subunit p14 K14529 RPP14; ribonuclease P protein subunit RPP14 [EC:3.1.26.5]
D 122141589 ribonuclease P protein subunit p14-like K14529 RPP14; ribonuclease P protein subunit RPP14 [EC:3.1.26.5]
D 109096183 ribonuclease P protein subunit p20-like K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
D 109100070 ribonuclease P protein subunit p20-like K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
D 109051330 rpp25a; ribonuclease P protein subunit p25a K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109072719 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109104884 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109104890 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109111837 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109082825 ribonuclease P protein subunit p38-like isoform X1 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
D 109105824 rpp38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
D 109078015 ribonuclease P protein subunit p40-like K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
D 109083611 rpp40; ribonuclease P protein subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 109047557 elac2; LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109057490 zinc phosphodiesterase ELAC protein 2-like K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109096164 elac1; zinc phosphodiesterase ELAC protein 1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109063038 rnaset2; ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 109068564 ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122139870 rnaset2l; LOW QUALITY PROTEIN: ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 109073284 ptcd1; pentatricopeptide repeat-containing protein 1, mitochondrial K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
D 109075086 LOW QUALITY PROTEIN: CCA tRNA nucleotidyltransferase 1, mitochondrial-like K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D 109091084 CCA tRNA nucleotidyltransferase 1, mitochondrial K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 109081039 tsen2; tRNA-splicing endonuclease subunit Sen2 isoform X1 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 109081971 tsen34; LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen34 K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
D 109101649 tsen15; tRNA-splicing endonuclease subunit Sen15 isoform X1 K15324 TSEN15; tRNA-splicing endonuclease subunit Sen15
D 109085497 tsen54; tRNA-splicing endonuclease subunit Sen54 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
D 109097051 rtcb; RNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D 109095906 ashwin isoform X1 K15432 ASW; ashwin
D 109097061 ashwin-like isoform X1 K15432 ASW; ashwin
D 109065110 RNA transcription, translation and transport factor protein-like K15433 CGI99; RLL motif containing protein 1
D 109106887 RNA transcription, translation and transport factor protein K15433 CGI99; RLL motif containing protein 1
D 109049629 fam98b; protein FAM98B isoform X1 K15434 FAM98B; protein FAM98B
D 109103535 ddx1; ATP-dependent RNA helicase DDX1 K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D 109095559 protein archease-like K24956 ZBTB8OS; protein archease
D 109105836 zbtb8os; protein archease isoform X1 K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
D 109101590 trpt1; tRNA 2'-phosphotransferase 1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
B tRNA transport factors
C tRNA export factors
D 109071601 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 109099893 xpot; LOW QUALITY PROTEIN: exportin-T K14288 XPOT; exportin-T
D 109113277 exportin-T K14288 XPOT; exportin-T
D 109052075 exportin-1-like K14290 XPO1; exportin-1
D 109091932 exportin-1-like K14290 XPO1; exportin-1
D 109104731 exportin-1 isoform X1 K14290 XPO1; exportin-1
D 109105273 exportin-1 isoform X1 K14290 XPO1; exportin-1
D 109069047 exportin-5-like isoform X1 K14289 XPO5; exportin-5
D 109045260 elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
D 109046091 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 109064272 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
D 109067524 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 109067853 si:dkey-37o8.1; elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 109073163 eef1a2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
D 109080072 elongation factor 1-alpha 1 isoform X1 K03231 EEF1A; elongation factor 1-alpha
D 109111735 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 109111739 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 109112297 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 122139431 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
D 122147234 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
D 109059871 LOW QUALITY PROTEIN: N-terminal kinase-like protein K08876 SCYL1; SCY1-like protein 1
D 109101548 N-terminal kinase-like protein K08876 SCYL1; SCY1-like protein 1
D 109046567 GTP-binding protein 1-like K24887 GTPBP1; GTP-binding protein 1
D 109059286 LOW QUALITY PROTEIN: GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
D 109064590 GTP-binding protein 1-like isoform X1 K24887 GTPBP1; GTP-binding protein 1
D 109072025 LOW QUALITY PROTEIN: GTP-binding protein 1-like K24887 GTPBP1; GTP-binding protein 1
C tRNA import factors
D 109051372 tnpo3; transportin-3 K15436 TRPO3; transportin-3
D 109066997 transportin-3 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 109063733 eprs1; bifunctional glutamate/proline--tRNA ligase K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D 109102693 bifunctional glutamate/proline--tRNA ligase-like isoform X1 K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D 109067868 ears2; probable glutamate--tRNA ligase, mitochondrial isoform X1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 122137678 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122145321 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 109083045 LOW QUALITY PROTEIN: isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109085656 iars1; isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109097951 isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109087311 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109087312 lars1b; leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109105248 lars2; probable leucine--tRNA ligase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109072588 methionine--tRNA ligase, cytoplasmic-like isoform X1 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109087413 methionine--tRNA ligase, mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109063365 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 109094957 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 109113790 rars2; LOW QUALITY PROTEIN: probable arginine--tRNA ligase, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109093871 lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 109102979 LOW QUALITY PROTEIN: lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122145690 kars1; lysine--tRNA ligase isoform X1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 109070176 aspartate--tRNA ligase, cytoplasmic-like K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109105252 aspartate--tRNA ligase, cytoplasmic-like K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109047477 LOW QUALITY PROTEIN: aspartate--tRNA ligase, mitochondrial-like K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109100065 dars2; aspartate--tRNA ligase, mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109054087 aimp1a; aminoacyl tRNA synthase complex-interacting multifunctional protein 1a K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D 109110480 aimp1b; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D 109096997 aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like isoform X1 K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2
D 109097011 aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2
D 109075471 eukaryotic translation elongation factor 1 epsilon-1-like K15439 EEF1E1; eukaryotic translation elongation factor 1 epsilon-1
D 109075474 eukaryotic translation elongation factor 1 epsilon-1-like K15439 EEF1E1; eukaryotic translation elongation factor 1 epsilon-1
C Other AARSs
D 109046980 LOW QUALITY PROTEIN: alanine--tRNA ligase, mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109081022 alanine--tRNA ligase, mitochondrial-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109109350 aars1; alanine--tRNA ligase, cytoplasmic K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109109351 LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109046242 nars1; asparagine--tRNA ligase, cytoplasmic K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 109070060 LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122139785 probable asparagine--tRNA ligase, mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 109045651 glycine--tRNA ligase-like K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 109049871 gars1; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 109064916 tars2; threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109065635 threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109073286 tars1; LOW QUALITY PROTEIN: threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109084929 threonine--tRNA ligase 2, cytoplasmic-like isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109110398 tars3; threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109048422 serine--tRNA ligase, cytoplasmic K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109061250 serine--tRNA ligase, mitochondrial K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109061284 serine--tRNA ligase, cytoplasmic-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109082040 cysteine--tRNA ligase, cytoplasmic-like isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109090491 cars2; probable cysteine--tRNA ligase, mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109095818 LOW QUALITY PROTEIN: probable cysteine--tRNA ligase, mitochondrial K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122137962 cysteine--tRNA ligase, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109054056 valine--tRNA ligase-like K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109063746 valine--tRNA ligase, mitochondrial-like isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109106496 valine--tRNA ligase-like K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109108345 hars; histidine--tRNA ligase isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 109047443 phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109050177 fars2; phenylalanine--tRNA ligase, mitochondrial isoform X1 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122135315 phenylalanine--tRNA ligase, mitochondrial-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122136481 phenylalanine--tRNA ligase alpha subunit-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109104167 phenylalanine--tRNA ligase beta subunit-like K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 109104456 phenylalanine--tRNA ligase beta subunit-like K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 109065176 tyrosine--tRNA ligase, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109085096 tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109110865 tyrosine--tRNA ligase, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122142492 yars2; tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109044878 wars2; tryptophan--tRNA ligase, mitochondrial isoform X1 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109064482 tryptophan--tRNA ligase, mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109088372 wars1; tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 109048579 D-aminoacyl-tRNA deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109107356 D-aminoacyl-tRNA deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109107362 D-aminoacyl-tRNA deacylase 2-like K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 122137631 dtd1; D-aminoacyl-tRNA deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109072466 alanyl-tRNA editing protein Aarsd1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D 109087244 alanyl-tRNA editing protein Aarsd1 isoform X1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
C AARS associated factors
D 109047357 tRNA selenocysteine 1-associated protein 1-like isoform X1 K25102 TRNAU1AP; tRNA selenocysteine 1-associated protein 1
D 109047360 tRNA selenocysteine 1-associated protein 1-like isoform X1 K25102 TRNAU1AP; tRNA selenocysteine 1-associated protein 1
D 109087848 uncharacterized HIT-like protein Synpcc7942_1390 isoform X1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 109089525 hint1; histidine triad nucleotide-binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 122137474 hint2; histidine triad nucleotide-binding protein 2, mitochondrial K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 109053491 histidine triad nucleotide-binding protein 3-like isoform X1 K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
D 109091715 histidine triad nucleotide-binding protein 3-like isoform X1 K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
D 109105092 LOW QUALITY PROTEIN: histidine triad nucleotide-binding protein 3-like K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
D 109105923 histidine triad nucleotide-binding protein 3-like K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
D 109050808 adat1; tRNA-specific adenosine deaminase 1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 109053763 tRNA-specific adenosine deaminase 2 isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 122138368 probable inactive tRNA-specific adenosine deaminase-like protein 3 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 109045390 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1 K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 109078775 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1 K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 109091290 dus2; tRNA-dihydrouridine(20) synthase [NAD(P)+]-like K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 109062304 LOW QUALITY PROTEIN: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
D 109071143 dus3l; tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
D 109076153 LOW QUALITY PROTEIN: B-cell receptor-associated protein 29-like K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
C Methylthiotransferase
D 109059453 cdk5rap1; CDK5 regulatory subunit-associated protein 1 K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D 109052810 cdkal1; threonylcarbamoyladenosine tRNA methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
C Methyltransferases
D 109058722 tRNA (guanine(26)-N(2))-dimethyltransferase-like isoform X1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 109058728 tRNA (guanine(26)-N(2))-dimethyltransferase-like isoform X1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 109090225 tRNA (uracil-5-)-methyltransferase homolog A-like K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 109090296 tRNA (uracil-5-)-methyltransferase homolog A-like K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 122134446 trmt2b; LOW QUALITY PROTEIN: tRNA (uracil(54)-C(5))-methyltransferase homolog-B K15331 TRMT2B; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D 109100951 tarbp1; LOW QUALITY PROTEIN: probable methyltransferase TARBP1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 109110846 nsun2; RNA cytosine C(5)-methyltransferase NSUN2 K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
D 109112223 RNA cytosine-C(5)-methyltransferase NSUN2-like K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
D 122135848 nsun3; tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial K21969 NSUN3; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.-]
D 109057133 nsun6; tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 109082929 tRNA (guanine(37)-N1)-methyltransferase-like isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 109088343 tRNA (guanine(37)-N1)-methyltransferase isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 109100934 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 109101081 trmt61b; tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 109103839 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 109074261 trmt6; tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 122149037 LOW QUALITY PROTEIN: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 109093128 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 109099735 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 109089185 mettl1; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 109053326 tRNA N(3)-methylcytidine methyltransferase METTL2-like isoform X1 K24974 METTL2; tRNA N(3)-methylcytidine methyltransferase METTL2 [EC:2.1.1.-]
D 109062341 mettl2a; tRNA N(3)-methylcytidine methyltransferase METTL2 isoform X1 K24974 METTL2; tRNA N(3)-methylcytidine methyltransferase METTL2 [EC:2.1.1.-]
D 109105918 mettl6; tRNA N(3)-methylcytidine methyltransferase METTL6 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 109064512 alkbh8; alkylated DNA repair protein alkB homolog 8 K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 109085811 probable tRNA methyltransferase 9B K28867 TRMT9B; tRNA methyltransferase 9B [EC:2.1.1.-]
D 109103030 probable tRNA methyltransferase 9B K28867 TRMT9B; tRNA methyltransferase 9B [EC:2.1.1.-]
D 109053782 trmt10b; tRNA methyltransferase 10 homolog B K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 109065196 tRNA methyltransferase 10 homolog A K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 109091941 tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1 K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 109105922 tRNA (guanine(10)-N2)-methyltransferase homolog K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 109047774 trmt13; tRNA:m(4)X modification enzyme TRM13 homolog K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 109052798 tRNA:m(4)X modification enzyme TRM13 homolog K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 109102839 probable tRNA (uracil-O(2)-)-methyltransferase K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
D 109094174 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 109059747 THUMP domain-containing protein 3-like isoform X1 K28362 THUMPD3; tRNA (guanine(6/7)-N(2))-methyltransferase [EC:2.1.1.256 2.1.1.-]
D 109105756 thumpd3; THUMP domain-containing protein 3 isoform X1 K28362 THUMPD3; tRNA (guanine(6/7)-N(2))-methyltransferase [EC:2.1.1.256 2.1.1.-]
D 109101647 trmt112; multifunctional methyltransferase subunit TRM112-like protein K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 109101648 multifunctional methyltransferase subunit TRM112-like protein isoform X1 K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 109087299 trdmt1; tRNA (cytosine(38)-C(5))-methyltransferase isoform X1 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 109101215 tRNA (cytosine(38)-C(5))-methyltransferase-like K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 109103117 trmo; tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 109103514 tyw1; S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 109079186 trmt12; tRNA wybutosine-synthesizing protein 2 homolog isoform X1 K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D 109099260 tyw3; tRNA wybutosine-synthesizing protein 3 homolog K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 109096661 lcmt2; tRNA wybutosine-synthesizing protein 4 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D 109095952 tRNA wybutosine-synthesizing protein 5-like K18066 TYW5; tRNA wybutosine-synthesizing protein 5 [EC:1.14.11.42]
D 109102216 pre-miRNA 5'-monophosphate methyltransferase K25191 BCDIN3D; RNA 5'-monophosphate methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 109046031 tRNA pseudouridine synthase A-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 109056011 pus1; tRNA pseudouridine synthase A isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 109049464 tRNA pseudouridine(38/39) synthase-like K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 109075414 pus3; tRNA pseudouridine(38/39) synthase isoform X1 K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 109066614 probable tRNA pseudouridine synthase 1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 109099834 trub1; probable tRNA pseudouridine synthase 1 isoform X1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 109067281 LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog-like protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 109104611 LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 109064383 pus10; putative tRNA pseudouridine synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D 109061214 rpusd4; mitochondrial RNA pseudouridine synthase rpusd4 K22538 RPUSD4; mitochondrial RNA pseudouridine synthase RPUSD4 [EC:5.4.99.-]
C Thiolation factors
D 109069263 mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1 K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 109070259 trmu; mitochondrial tRNA-specific 2-thiouridylase 1 K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 109047304 cytoplasmic tRNA 2-thiolation protein 1 isoform X1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 109069189 ctu1; cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 109071530 ctu2; cytoplasmic tRNA 2-thiolation protein 2 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 109061163 cysteine desulfurase, mitochondrial-like K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 122146605 cysteine desulfurase, mitochondrial-like K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 109052539 ubiquitin-related modifier 1-like isoform X2 K12161 URM1; ubiquitin related modifier 1
D 109064292 ubiquitin-related modifier 1-like K12161 URM1; ubiquitin related modifier 1
D 109108523 adenylyltransferase and sulfurtransferase MOCS3-like isoform X1 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
D 109113665 adenylyltransferase and sulfurtransferase MOCS3-like K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 109082269 tp53rk; EKC/KEOPS complex subunit TP53RK K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 122146568 EKC/KEOPS complex subunit TP53RK-like K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 109065341 probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 109072015 osgepl1; probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 122137132 probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 109069374 EKC/KEOPS complex subunit TPRKB isoform X1 K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 109073122 EKC/KEOPS complex subunit TPRKB-like K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 109060894 EKC/KEOPS complex subunit LAGE3 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
D 122146480 L antigen family member 3-like K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
D 122148978 si:dkeyp-55f12.3; uncharacterized protein si:dkeyp-55f12.3 K15903 GON7; EKC/KEOPS complex subunit GON7
C Elongator complex
D 109079308 elongator complex protein 1-like K11373 ELP1; elongator complex protein 1
D 109102827 elp1; elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 109070690 elongator complex protein 2 isoform X1 K11374 ELP2; elongator complex protein 2
D 109111611 elongator complex protein 2-like K11374 ELP2; elongator complex protein 2
D 109078249 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 109093158 LOW QUALITY PROTEIN: elongator complex protein 4-like K11375 ELP4; elongator complex protein 4
D 109093159 elp4; elongator complex protein 4 isoform X1 K11375 ELP4; elongator complex protein 4
D 109087398 elp5; elongator complex protein 5 K11376 ELP5; elongator complex protein 5
D 109106069 elongator complex protein 6-like K11377 ELP6; elongator complex protein 6
D 109106072 elongator complex protein 6-like K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 109054745 DPH3 homolog K15455 DPH3; diphthamide biosynthesis protein 3
D 109063386 dph3; DPH3 homolog K15455 DPH3; diphthamide biosynthesis protein 3
D 109056805 protein KTI12 homolog K15456 KTI12; protein KTI12
D 109086617 protein KTI12 homolog K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 109058775 yrdC domain-containing protein, mitochondrial-like K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 109105676 yrdc; yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 109102024 tRNA dimethylallyltransferase-like isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 109110875 tRNA dimethylallyltransferase-like isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 109052182 qtrt1; LOW QUALITY PROTEIN: queuine tRNA-ribosyltransferase catalytic subunit 1 K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 109058579 queuine tRNA-ribosyltransferase accessory subunit 2-like isoform X2 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 109085567 queuine tRNA-ribosyltransferase accessory subunit 2 isoform X1 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 109088212 selenide, water dikinase 3-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109088583 selenide, water dikinase 3-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109108896 sephs1; selenide, water dikinase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109109206 selenide, water dikinase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109081414 THUMP domain-containing protein 1 K06963 TAN1; tRNA acetyltransferase TAN1
D 122136012 THUMP domain-containing protein 1-like isoform X1 K06963 TAN1; tRNA acetyltransferase TAN1
D 109066864 thg1l; probable tRNA(His) guanylyltransferase isoform X1 K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 109094551 arginyl-tRNA--protein transferase 1-like isoform X1 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 109100707 arginyl-tRNA--protein transferase 1-like isoform X1 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 109095264 DALR anticodon-binding domain-containing protein 3 K24973 DALRD3; DALR anticodon-binding domain-containing protein 3
D 109112272 dalrd3; DALR anticodon-binding domain-containing protein 3 K24973 DALRD3; DALR anticodon-binding domain-containing protein 3
B tRNA degradation factors
C TRAMP complex
D 109084830 terminal nucleotidyltransferase 4B-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 109093257 LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4B-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 109112222 LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4A-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 109053126 zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
D 109096681 zinc finger CCHC domain-containing protein 7-like K12597 AIR1_2; protein AIR1/2
D 109096825 LOW QUALITY PROTEIN: exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 109097793 mtrex; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 109108188 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 109110725 xrn1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 109049318 xrn2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 109068240 5'-3' exoribonuclease 2-like isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 109044913 bpnt1; 3'(2'),5'-bisphosphate nucleotidase 1 isoform X1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
D 122141695 ribonuclease-like 3 K16631 ANG; angiogenin [EC:3.1.27.-]
D 109099183 ifit10; interferon-induced protein with tetratricopeptide repeats 10 K24850 IFIT5; interferon-induced protein with tetratricopeptide repeats 5
D 109099184 interferon-induced protein with tetratricopeptide repeats 5-like K24850 IFIT5; interferon-induced protein with tetratricopeptide repeats 5
D 109099490 interferon-induced protein with tetratricopeptide repeats 5-like K24850 IFIT5; interferon-induced protein with tetratricopeptide repeats 5
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 109047557 elac2; LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109057490 zinc phosphodiesterase ELAC protein 2-like K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109096164 elac1; zinc phosphodiesterase ELAC protein 1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109063038 rnaset2; ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 109068564 ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 122139870 rnaset2l; LOW QUALITY PROTEIN: ribonuclease T2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D 109075086 LOW QUALITY PROTEIN: CCA tRNA nucleotidyltransferase 1, mitochondrial-like K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D 109091084 CCA tRNA nucleotidyltransferase 1, mitochondrial K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D 109097051 rtcb; RNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 109087311 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109087312 lars1b; leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109105248 lars2; probable leucine--tRNA ligase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 122137678 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 122145321 probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 109065176 tyrosine--tRNA ligase, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109085096 tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109110865 tyrosine--tRNA ligase, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 122142492 yars2; tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109044878 wars2; tryptophan--tRNA ligase, mitochondrial isoform X1 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109064482 tryptophan--tRNA ligase, mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109088372 wars1; tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109064916 tars2; threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109065635 threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109073286 tars1; LOW QUALITY PROTEIN: threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109084929 threonine--tRNA ligase 2, cytoplasmic-like isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109110398 tars3; threonine--tRNA ligase 1, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109083045 LOW QUALITY PROTEIN: isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109085656 iars1; isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109097951 isoleucine--tRNA ligase, mitochondrial-like K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109093871 lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 109102979 LOW QUALITY PROTEIN: lysine--tRNA ligase-like K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 122145690 kars1; lysine--tRNA ligase isoform X1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 109046980 LOW QUALITY PROTEIN: alanine--tRNA ligase, mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109081022 alanine--tRNA ligase, mitochondrial-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109109350 aars1; alanine--tRNA ligase, cytoplasmic K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109109351 LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109054056 valine--tRNA ligase-like K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109063746 valine--tRNA ligase, mitochondrial-like isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109106496 valine--tRNA ligase-like K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109072588 methionine--tRNA ligase, cytoplasmic-like isoform X1 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109087413 methionine--tRNA ligase, mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109048422 serine--tRNA ligase, cytoplasmic K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109061250 serine--tRNA ligase, mitochondrial K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109061284 serine--tRNA ligase, cytoplasmic-like K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109047477 LOW QUALITY PROTEIN: aspartate--tRNA ligase, mitochondrial-like K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109100065 dars2; aspartate--tRNA ligase, mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109082040 cysteine--tRNA ligase, cytoplasmic-like isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109090491 cars2; probable cysteine--tRNA ligase, mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109095818 LOW QUALITY PROTEIN: probable cysteine--tRNA ligase, mitochondrial K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 122137962 cysteine--tRNA ligase, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109067868 ears2; probable glutamate--tRNA ligase, mitochondrial isoform X1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 109063365 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 109094957 glutamine--tRNA ligase-like K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 109113790 rars2; LOW QUALITY PROTEIN: probable arginine--tRNA ligase, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109047443 phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109050177 fars2; phenylalanine--tRNA ligase, mitochondrial isoform X1 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122135315 phenylalanine--tRNA ligase, mitochondrial-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 122136481 phenylalanine--tRNA ligase alpha subunit-like K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109104167 phenylalanine--tRNA ligase beta subunit-like K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 109104456 phenylalanine--tRNA ligase beta subunit-like K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 109108345 hars; histidine--tRNA ligase isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 109046242 nars1; asparagine--tRNA ligase, cytoplasmic K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 109070060 LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 122139785 probable asparagine--tRNA ligase, mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 109048579 D-aminoacyl-tRNA deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109107356 D-aminoacyl-tRNA deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109107362 D-aminoacyl-tRNA deacylase 2-like K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 122137631 dtd1; D-aminoacyl-tRNA deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109072466 alanyl-tRNA editing protein Aarsd1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D 109087244 alanyl-tRNA editing protein Aarsd1 isoform X1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferases
D 109059453 cdk5rap1; CDK5 regulatory subunit-associated protein 1 K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D 109052810 cdkal1; threonylcarbamoyladenosine tRNA methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
C Methyltransferases
D 109089185 mettl1; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 109103117 trmo; tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 109046031 tRNA pseudouridine synthase A-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 109056011 pus1; tRNA pseudouridine synthase A isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 109066614 probable tRNA pseudouridine synthase 1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 109099834 trub1; probable tRNA pseudouridine synthase 1 isoform X1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 109067281 LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog-like protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 109104611 LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 109061163 cysteine desulfurase, mitochondrial-like K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 122146605 cysteine desulfurase, mitochondrial-like K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 109082269 tp53rk; EKC/KEOPS complex subunit TP53RK K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 122146568 EKC/KEOPS complex subunit TP53RK-like K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 109065341 probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 109072015 osgepl1; probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 122137132 probable tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 109102024 tRNA dimethylallyltransferase-like isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 109110875 tRNA dimethylallyltransferase-like isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 109083815 pts; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D 109088212 selenide, water dikinase 3-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109088583 selenide, water dikinase 3-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109108896 sephs1; selenide, water dikinase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109109206 selenide, water dikinase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109058775 yrdC domain-containing protein, mitochondrial-like K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 109105676 yrdc; yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
B tRNA degradation factors
C 109091218 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2026