+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Cyprinus carpio (common carp)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        109056007 polr2a; DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        109067075 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        109046857 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        109050878 DNA-directed RNA polymerase II subunit RPB3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        109050595 polr2c; DNA-directed RNA polymerase II subunit RPB3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        109081995 DNA-directed RNA polymerase II subunit RPB11-a	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        109066872 DNA-directed RNA polymerase II subunit RPB11-a-like	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        109047406 DNA-directed RNA polymerase II subunit RPB4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        109078689 polr2d; DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        109071126 polr2g; DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        109110454 DNA-directed RNA polymerase II subunit RPB7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        109059244 polr2i; DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        109087877 DNA-directed RNA polymerase II subunit RPB9-like	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        109077273 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit GRINL1A-like	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
E        109113682 DNA-directed RNA polymerase II subunit GRINL1A-like	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        109071198 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109095179 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109046592 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109061226 polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109096887 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109080980 polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109055776 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        109055782 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        109053998 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        109053950 transcription initiation factor IIA subunit 1-like isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        109059511 TFIIA-alpha and beta-like factor	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        109088850 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        109088851 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        109056860 gtf2b; transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
E        109051811 transcription initiation factor IIB-like isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        109083159 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109064048 TATA box-binding protein-like protein 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109079076 LOW QUALITY PROTEIN: TATA box-binding protein-like protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109071060 TATA box-binding protein-like protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109107434 TATA box-binding protein-like protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109055456 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        109081230 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        109105798 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        109064992 transcription initiation factor TFIID subunit 3-like	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        109069648 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109092294 taf4; transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109113383 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109087340 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109068832 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109055647 taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109110123 taf5; transcription initiation factor TFIID subunit 5 isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109069121 taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109101520 taf7; transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        109102801 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        109058031 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        109052949 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        109058883 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        109078931 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        109098895 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        109064750 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109095546 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109068264 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109048622 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        109066640 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        109092125 transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        109060818 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        109060828 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        109055554 TATA-binding protein-associated factor 2N-like	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      TFIIE
E        109071252 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        109096660 general transcription factor IIE subunit 1-like isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        109092961 general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        109088218 general transcription factor IIE subunit 2-like isoform X1	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        109060333 LOW QUALITY PROTEIN: general transcription factor IIF subunit 1-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        109103091 general transcription factor IIF subunit 2-like isoform X1	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        109103095 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        109075835 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        109089380 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        109099419 general transcription factor IIH subunit 1-like	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        109098857 LOW QUALITY PROTEIN: general transcription factor IIH subunit 1-like	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        109093947 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        109083513 general transcription factor IIH subunit 2 isoform X1	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        109089153 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        109074168 gtf2h3; general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        109098412 gtf2h4; general transcription factor IIH subunit 4	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        109045193 ercc3; TFIIH basal transcription factor complex helicase XPB subunit isoform X1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        109084136 ercc2; TFIIH basal transcription factor complex helicase XPD subunit	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        109092384 TFIIH basal transcription factor complex helicase XPD subunit-like isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        109066145 general transcription factor IIH subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        109051407 general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        109078831 cyclin-dependent kinase 7 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        109078832 cyclin-dependent kinase 7-like isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        109044905 CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        109088397 LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        109081533 cyclin-H-like isoform X1	K06634 CCNH; cyclin H 
E        109081538 cyclin-H-like	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        109056385 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        109062773 mediator of RNA polymerase II transcription subunit 6 isoform X1	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        109063283 mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        109052032 mediator of RNA polymerase II transcription subunit 11 isoform X1	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        109067783 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        109092587 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        109055862 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        109082556 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        109065428 mediator of RNA polymerase II transcription subunit 18 isoform X1	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        109048297 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 19-A-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        109050397 mediator of RNA polymerase II transcription subunit 19-B	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        109050521 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 19-B-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        109100887 mediator of RNA polymerase II transcription subunit 19-B-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        109080017 med20; mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        109090660 mediator of RNA polymerase II transcription subunit 22-like isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        109090670 mediator of RNA polymerase II transcription subunit 22 isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        109101736 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        109081098 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        109067123 mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        109076621 mediator of RNA polymerase II transcription subunit 29-like	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        109075436 mediator of RNA polymerase II transcription subunit 30-like isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
E        109096777 mediator of RNA polymerase II transcription subunit 30-like	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
E        109094685 med30; mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        109059683 mediator of RNA polymerase II transcription subunit 1-like	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        109083766 mediator of RNA polymerase II transcription subunit 1-like	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        109112704 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1-like	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        109102234 mediator of RNA polymerase II transcription subunit 4	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        109102237 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        109102270 mediator of RNA polymerase II transcription subunit 7-like isoform X1	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        109102271 mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        109063016 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 9-like	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        109111597 mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        109111604 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        109092485 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        109092366 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        109064444 med31; mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        109096809 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        109096815 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        109054395 med15; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        109060614 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        109061698 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 16-like	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        109053058 cdk8; cyclin-dependent kinase 8	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        109051600 cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        109064586 cyclin-dependent kinase 8-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        109076182 cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        109099729 cyclin-C isoform X1	K15161 CCNC; cyclin-C 
E        109069524 cyclin-C-like	K15161 CCNC; cyclin-C 
E        109109726 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        109087412 mediator of RNA polymerase II transcription subunit 12-like	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        109107146 mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        109099321 mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        109088010 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        109091118 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        109060138 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        109113797 med23; mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        109061372 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 24-like	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        109100042 mediator of RNA polymerase II transcription subunit 24	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        109080626 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        109080627 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        109099022 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 26-like	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        109105443 mediator of RNA polymerase II transcription subunit 26	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        109056362 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 26-like	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        109079878 med27; mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        109070203 LOW QUALITY PROTEIN: histone acetyltransferase KAT2A-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109067150 LOW QUALITY PROTEIN: histone acetyltransferase KAT2A-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109094987 histone acetyltransferase KAT2A-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109098452 histone acetyltransferase KAT2B-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109098454 histone acetyltransferase KAT2B-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        109056583 LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        109058487 trrap; LOW QUALITY PROTEIN: transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        109061734 transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        109052243 supt3h; transcription initiation protein SPT3 homolog isoform X1	K11313 SUPT3H; transcription initiation protein SPT3 
E        109107716 transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        109103120 tada2a; transcriptional adapter 2-alpha	K11314 TADA2A; transcriptional adapter 2-alpha 
E        109104222 transcriptional adapter 2-alpha-like	K11314 TADA2A; transcriptional adapter 2-alpha 
E        109070533 transcriptional adapter 2-beta-like	K15127 TADA2B; transcriptional adapter 2-beta 
E        109093365 LOW QUALITY PROTEIN: transcriptional adapter 2-beta-like	K15127 TADA2B; transcriptional adapter 2-beta 
E        109061642 transcriptional adapter 3-like isoform X1	K11315 TADA3; transcriptional adapter 3 
E        109076145 LOW QUALITY PROTEIN: transcriptional adapter 3-like	K11315 TADA3; transcriptional adapter 3 
E        109093334 tada1; transcriptional adapter 1	K11317 TADA1; transcriptional adapter 1 
E        109105798 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        109069648 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109092294 taf4; transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109113383 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109087340 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        109068832 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109055647 taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109110123 taf5; transcription initiation factor TFIID subunit 5 isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        109069121 taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109101520 taf7; transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        109102801 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        109078931 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        109098895 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        109064750 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109095546 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109068264 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        109092125 transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        109052223 ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        109049943 ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        109045993 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        109070851 ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        109056931 SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        109092208 LOW QUALITY PROTEIN: SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        109076589 STAGA complex 65 subunit gamma-like	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        109107303 supt7l; STAGA complex 65 subunit gamma	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        109051465 ataxin-7-like	K11318 ATXN7; ataxin-7 
E        109066405 LOW QUALITY PROTEIN: ataxin-7-like protein 2	K11318 ATXN7; ataxin-7 
E        109094624 ataxin-7-like protein 2	K11318 ATXN7; ataxin-7 
E        109098498 ataxin-7-like	K11318 ATXN7; ataxin-7 
E        109097177 LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        109088518 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        109082407 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        109105567 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        109080297 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        109100192 LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        109105823 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        109108732 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        109070436 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        109070446 LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        109055327 smarca4; LOW QUALITY PROTEIN: transcription activator BRG1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        109074875 LOW QUALITY PROTEIN: probable global transcription activator SNF2L2	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        109081449 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109084272 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109104918 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109060536 LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109081845 SWI/SNF complex subunit SMARCC1-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109081848 SWI/SNF complex subunit SMARCC1-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109111805 SWI/SNF complex subunit SMARCC1-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109082238 LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        109068890 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109059155 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109053444 smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109056911 smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109062085 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        109050116 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        109073280 actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        109051881 actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        109057502 actl6a; actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        109101063 actin-like protein 6B isoform X1	K11652 ACTL6B; actin-like protein 6B 
E        109113276 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109106600 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109111495 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109112681 AT-rich interactive domain-containing protein 1B-like isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109078920 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2-like	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        109080382 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
E        109056949 LOW QUALITY PROTEIN: protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
E        109056503 LOW QUALITY PROTEIN: protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
E        109051245 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        109081449 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109084272 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        109104918 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        109069435 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        109096830 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        109086156 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        109100462 LOW QUALITY PROTEIN: cell division cycle and apoptosis regulator protein 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        109110236 calcium-binding and coiled-coil domain-containing protein 1-like isoform X1	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
E        109056222 LOW QUALITY PROTEIN: calcium-binding and coiled-coil domain-containing protein 1-like	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        109052569 LOW QUALITY PROTEIN: transcription elongation factor A protein 2-like	K03145 TFIIS; transcription elongation factor S-II 
E        109052578 transcription elongation factor A protein 2-like	K03145 TFIIS; transcription elongation factor S-II 
E        109103298 LOW QUALITY PROTEIN: transcription elongation factor A protein 1-like	K03145 TFIIS; transcription elongation factor S-II 
E        109106127 uncharacterized protein C6orf132 homolog isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        109068677 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109084799 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109090893 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109104364 supt5h; transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        109104367 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        109045609 LOW QUALITY PROTEIN: transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
E        109068743 LOW QUALITY PROTEIN: transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        109096694 ttf2; transcription termination factor 2 isoform X1	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        109079652 LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        109084582 pre-mRNA cleavage complex 2 protein Pcf11-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        109080360 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        109111250 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        109055810 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        109112775 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        109108214 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        109047726 cleavage and polyadenylation specificity factor subunit 4 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        109047662 cleavage and polyadenylation specificity factor subunit 4-like isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        109086602 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        109070847 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        109084532 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109060231 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109055610 serine/threonine-protein phosphatase PP1-beta-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109057071 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109061449 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109066396 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109101267 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109068388 serine/threonine-protein phosphatase PP1-beta-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109108411 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        109090717 sympk; symplekin	K06100 SYMPK; symplekin 
E        109057203 symplekin-like	K06100 SYMPK; symplekin 
E        109088547 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        109088497 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        109049318 LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        109068240 LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        109085515 dxo; decapping and exoribonuclease protein	K14845 RAI1; RAT1-interacting protein 
E        109048269 rprd1b; regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        109058163 LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1A-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        109051057 LOW QUALITY PROTEIN: splicing factor, proline- and glutamine-rich-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        109108516 protein SCAF8-like	K13191 RBM16; RNA-binding protein 16 
E        109108519 protein SCAF8-like	K13191 RBM16; RNA-binding protein 16 
E        109097903 splicing factor, arginine/serine-rich 15-like isoform X1	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        109103309 splicing factor, arginine/serine-rich 15-like isoform X1	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        109083190 LOW QUALITY PROTEIN: probable helicase senataxin	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        109052374 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        109093472 pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        109103587 LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        109110561 parafibromin-like	K15175 CDC73; parafibromin 
E        109056781 LOW QUALITY PROTEIN: parafibromin-like	K15175 CDC73; parafibromin 
E        109060601 LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        109093495 LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        109110294 leo1; RNA polymerase-associated protein LEO1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        109100606 LOW QUALITY PROTEIN: RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        109099340 LOW QUALITY PROTEIN: RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        109092954 LOW QUALITY PROTEIN: negative elongation factor A-like	K15179 WHSC2; negative elongation factor A 
E        109092955 negative elongation factor A-like	K15179 WHSC2; negative elongation factor A 
E        109061147 LOW QUALITY PROTEIN: negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        109090600 negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        109091577 nelfcd; negative elongation factor C/D isoform X1	K15181 TH1L; negative elongation factor C/D 
E        109058528 negative elongation factor C/D-like	K15181 TH1L; negative elongation factor C/D 
E        109111153 nelfe; negative elongation factor E	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        109047348 LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109045478 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109070939 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109074655 AF4/FMR2 family member 4-like isoform X1	K15185 AFF4; AF4/FMR2 family member 4 
E        109077896 AF4/FMR2 family member 4-like	K15185 AFF4; AF4/FMR2 family member 4 
E        109072532 ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        109105849 ELL-associated factor 1-like	K15186 EAF; ELL-associated factor 
E        109087724 LOW QUALITY PROTEIN: ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        109097104 ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        109105651 eaf1; ELL-associated factor 1	K15186 EAF; ELL-associated factor 
E        109064896 protein ENL-like isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        109092602 mllt3; protein AF-9	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        109095389 LOW QUALITY PROTEIN: protein ENL-like	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        109094926 protein ENL-like	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        109083318 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        109063724 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109060578 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109063784 cyclin-T1-like isoform X1	K15188 CCNT; cyclin T 
E        109047292 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109087666 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109083019 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109075541 uncharacterized protein LOC109075541	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
E        109061496 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        109047348 LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109045478 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109070939 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        109085806 little elongation complex subunit 2-like	K26144 ICE2; little elongation complex subunit 2 
D      Brd4/P-TEFb complex
E        109048909 bromodomain-containing protein 4-like isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        109048927 bromodomain-containing protein 4-like isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        109083318 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        109063724 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109060578 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109063784 cyclin-T1-like isoform X1	K15188 CCNT; cyclin T 
E        109047292 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109087666 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109083019 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109075541 uncharacterized protein LOC109075541	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
E        109061496 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        109074004 LOW QUALITY PROTEIN: protein HEXIM-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        109068029 protein HEXIM	K15189 HEXIM1_2; protein HEXIM1/2 
E        109048309 LOW QUALITY PROTEIN: 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        109084335 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        109077909 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        109076712 larp7; la-related protein 7 isoform X1	K15191 LARP7; La-related protein 7 
E        109083318 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        109063724 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109060578 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109063784 cyclin-T1-like isoform X1	K15188 CCNT; cyclin T 
E        109047292 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109087666 cyclin-T2-like	K15188 CCNT; cyclin T 
E        109083019 cyclin-T1-like	K15188 CCNT; cyclin T 
E        109075541 uncharacterized protein LOC109075541	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
E        109061496 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
E        109049905 LOW QUALITY PROTEIN: cell cycle and apoptosis regulator protein 2-like	K25816 CCAR2; cell cycle and apoptosis regulator protein 2 
E        109095746 DBIRD complex subunit ZNF326-like	K13204 ZNF326; zinc finger protein 326 
E        109091769 DBIRD complex subunit ZNF326-like isoform X1	K13204 ZNF326; zinc finger protein 326 
D      Others
E        109090626 LOW QUALITY PROTEIN: general transcription factor II-I repeat domain-containing protein 1-like	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        109087762 LOW QUALITY PROTEIN: general transcription factor II-I repeat domain-containing protein 1-like	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        109081247 LOW QUALITY PROTEIN: general transcription factor II-I repeat domain-containing protein 1-like	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        109093808 TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        109061334 TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        109051582 LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        109092368 protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        109092371 protein Dr1-like	K21751 DR1; down-regulator of transcription 1 
E        109093915 LOW QUALITY PROTEIN: dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        109107249 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        109055039 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        109065692 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        109083494 protein SPT2 homolog isoform X1	K15193 SPTY2D1; protein SPT2 
E        109068348 protein SPT2 homolog isoform X1	K15193 SPTY2D1; protein SPT2 
E        109062580 LOW QUALITY PROTEIN: AF4/FMR2 family member 2-like	K15194 AFF2; AF4/FMR2 family member 2 
E        109102022 AF4/FMR2 family member 2-like	K15194 AFF2; AF4/FMR2 family member 2 
E        109096351 AF4/FMR2 family member 3-like	K15195 AFF3; AF4/FMR2 family member 3 
E        109096354 AF4/FMR2 family member 3-like	K15195 AFF3; AF4/FMR2 family member 3 
E        109061757 LOW QUALITY PROTEIN: RNA polymerase II subunit A C-terminal domain phosphatase-like	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        109103067 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109103070 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109049862 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109058197 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109074649 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109079932 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109104040 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109072251 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        109093243 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        109068908 cysteine/serine-rich nuclear protein 3-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109068912 cysteine/serine-rich nuclear protein 3-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109083135 cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109049342 cysteine/serine-rich nuclear protein 3-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109047999 cysteine/serine-rich nuclear protein 2-like isoform X1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109048993 cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109105577 cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        109107345 LOW QUALITY PROTEIN: RNA polymerase II-associated protein 1-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        109107707 LOW QUALITY PROTEIN: RNA polymerase II-associated protein 1-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        109099680 rpap2; LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        109054702 rpap3; RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        109050976 cyclin-K-like	K23326 CCNK; cyclin K 
E        109085771 cyclin-K-like	K23326 CCNK; cyclin K 
E        109113286 cyclin-K-like	K23326 CCNK; cyclin K 
E        109106142 gpn2; GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        109045171 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        109045170 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        109071262 gpn1; GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        109053659 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        109109093 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        109074152 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        109111258 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        109103413 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        109075407 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC3-like	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        109065403 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        109085103 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        109091800 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        109070319 polr3e; DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        109046672 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        109110627 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        109053449 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        109102301 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        109077553 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        109107942 DNA-directed RNA polymerase III subunit RPC8-like isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        109068515 DNA-directed RNA polymerase III subunit RPC8-like isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        109046495 polr3h; DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        109045229 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
D      Pol I, II, III common subunits
E        109071198 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109095179 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109046592 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109061226 polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109096887 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109080980 polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109055776 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        109055782 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
C    Basal transcription factors
D      TFIIIA
E        109049856 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        109079877 P43 5S RNA-binding protein-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        109081581 gtf3a; transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
E        109062087 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109065718 gastrula zinc finger protein XlCGF57.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109079131 gastrula zinc finger protein XlCGF57.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109085539 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109094807 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109104395 gastrula zinc finger protein XlCGF7.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109057619 gastrula zinc finger protein XlCGF57.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109072394 gastrula zinc finger protein XlCGF8.2DB-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        109106377 zinc finger protein 239-like	K09191 GTF3A; general transcription factor IIIA 
E        109075057 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109093859 zinc finger protein 239-like	K09191 GTF3A; general transcription factor IIIA 
E        109065215 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109081140 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109077368 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109049782 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109045310 zinc finger and BTB domain-containing protein 16-A	K09191 GTF3A; general transcription factor IIIA 
E        109045319 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109046480 gastrula zinc finger protein XlCGF7.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109052558 gastrula zinc finger protein XlCGF57.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109086813 gastrula zinc finger protein XlCGF49.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109109139 gastrula zinc finger protein XlCGF7.1-like	K09191 GTF3A; general transcription factor IIIA 
E        109069492 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
E        109092140 zinc finger protein 211-like	K09191 GTF3A; general transcription factor IIIA 
E        109108333 zinc finger protein 567-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        109083159 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109064048 TATA box-binding protein-like protein 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109079076 LOW QUALITY PROTEIN: TATA box-binding protein-like protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109071060 TATA box-binding protein-like protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109107434 TATA box-binding protein-like protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109045844 transcription factor IIIB 90 kDa subunit-like isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        109058210 LOW QUALITY PROTEIN: transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        109113460 brf2; LOW QUALITY PROTEIN: transcription factor IIIB 50 kDa subunit	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        109070148 transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
E        109045528 transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
E        109099464 transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
E        109086725 transcription factor TFIIIB component B'' homolog isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        109053746 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 2-like	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        109069032 general transcription factor 3C polypeptide 2-like isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        109045936 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 4-like	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        109045207 gtf3c5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        109105740 gtf3c6; LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 6	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        109045207 gtf3c5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        109047678 LOW QUALITY PROTEIN: snRNA-activating protein complex subunit 1-like	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        109054193 snRNA-activating protein complex subunit 1-like	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        109049226 snRNA-activating protein complex subunit 2-like	K15209 SNAPC2; snRNA-activating protein complex subunit 2 
E        109082122 snapc3; snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
E        109096367 LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 1-like	K09364 POU2F; POU domain transcription factor, class 2 
E        109058018 POU domain, class 2, transcription factor 3-like	K09364 POU2F; POU domain transcription factor, class 2 
E        109057784 POU domain, class 2, transcription factor 1-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109054243 pou2f3; POU domain, class 2, transcription factor 3	K09364 POU2F; POU domain transcription factor, class 2 
E        109096819 LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 1-like	K09364 POU2F; POU domain transcription factor, class 2 
E        109070791 POU domain, class 2, transcription factor 2-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109084075 POU domain, class 2, transcription factor 2-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        109046005 POU domain, class 5, transcription factor 1-like	K09367 POU5F; POU domain transcription factor, class 5 
E        109046008 LOW QUALITY PROTEIN: POU domain, class 5, transcription factor 1-like	K09367 POU5F; POU domain transcription factor, class 5 
D      Others
E        109072921 zinc finger protein 143-like isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        109110017 zinc finger protein 143 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        109080066 LOW QUALITY PROTEIN: zinc finger protein 76-like	K20828 ZNF143_76; zinc finger protein 143/76 
E        109110000 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        109110011 repressor of RNA polymerase III transcription MAF1 homolog isoform X1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        109067552 repressor of RNA polymerase III transcription MAF1 homolog isoform X1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        109102893 LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        109074152 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        109111258 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        109103413 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        109077617 polr1e; DNA-directed RNA polymerase I subunit RPA49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        109058369 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        109106155 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        109058882 DNA-directed RNA polymerase I subunit RPA34-like	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        109047832 DNA-directed RNA polymerase I subunit RPA34-like	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        109098422 znrd1; DNA-directed RNA polymerase I subunit RPA12	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        109071198 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109095179 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109046592 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        109061226 polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109096887 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        109080980 polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109055776 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        109055782 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
C    Basal transcription factors
D      SL1/TIF-1B
E        109083159 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109064048 TATA box-binding protein-like protein 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109079076 LOW QUALITY PROTEIN: TATA box-binding protein-like protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109071060 TATA box-binding protein-like protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109107434 TATA box-binding protein-like protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109113518 taf1a; TATA box-binding protein-associated factor RNA polymerase I subunit A	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        109113556 taf1b; LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit B	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        109046215 taf1c; TATA box-binding protein-associated factor RNA polymerase I subunit C	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
C    Other transcription-related factors
D      UBF
E        109102590 nucleolar transcription factor 1-B-like isoform X1	K09273 UBTF; upstream-binding transcription factor 
E        109046004 nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
E        109051211 ubtf; nucleolar transcription factor 1 isoform X1	K09273 UBTF; upstream-binding transcription factor 
E        109099306 LOW QUALITY PROTEIN: nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        109073836 rrn3; RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        109068677 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109084799 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109090893 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        109104364 supt5h; transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        109104367 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        109092005 LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        109058951 LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger domain protein 2A-like	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
D      CTDK-I complex
D      Transcription termination factors
E        109063270 ttf1; LOW QUALITY PROTEIN: transcription termination factor 1	K15225 TTF1; transcription termination factor 1 
E        109050105 ptrf; polymerase I and transcript release factor	K19387 PTRF; polymerase I and transcript release factor 
E        109059641 polymerase I and transcript release factor-like	K19387 PTRF; polymerase I and transcript release factor 
D      Others
E        109062169 nolc1; nucleolar and coiled-body phosphoprotein 1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        109056860 gtf2b; transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
E        109051811 transcription initiation factor IIB-like isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        109071252 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        109096660 general transcription factor IIE subunit 1-like isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024