+D GENES KO #

  KEGG Orthology (KO) - Corynebacterium casei

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ccg00010] D CCASEI_11195 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_05405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_10145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCASEI_08440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CCASEI_09545 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CCASEI_12815 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCASEI_07495 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCASEI_09765 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCASEI_07505 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCASEI_07500 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CCASEI_02250 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCASEI_09675 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCASEI_05785 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCASEI_05115 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CCASEI_05320 dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_13390 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CCASEI_13985 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_12930 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CCASEI_04175 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_06605 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CCASEI_13075 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ccg00020] D CCASEI_10265 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CCASEI_04230 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CCASEI_07340 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CCASEI_03345 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CCASEI_08945 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_00140 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CCASEI_00135 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCASEI_12120 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CCASEI_02095 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCASEI_02100 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCASEI_02090 Succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCASEI_09550 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CCASEI_11010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCASEI_06130 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CCASEI_03495 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CCASEI_13075 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CCASEI_05115 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CCASEI_05320 dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ccg00030] D CCASEI_10145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCASEI_07475 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CCASEI_07485 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CCASEI_07095 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CCASEI_07555 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CCASEI_07465 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CCASEI_07470 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CCASEI_11075 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CCASEI_02125 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CCASEI_03990 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_09725 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CCASEI_04260 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CCASEI_12815 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCASEI_09545 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CCASEI_08440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:ccg00040] D CCASEI_13015 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCASEI_04785 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_10015 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_07555 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CCASEI_05595 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:ccg00051] D CCASEI_10780 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CCASEI_10815 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CCASEI_10835 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CCASEI_08440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CCASEI_09545 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CCASEI_06430 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CCASEI_05580 hypothetical protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D CCASEI_12815 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCASEI_07495 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCASEI_11075 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CCASEI_06425 fructose specific PTS system component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CCASEI_04145 PTS system mannose-specific transporter subunits IIBCA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:ccg00052] D CCASEI_05190 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CCASEI_06505 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CCASEI_04785 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_10015 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_11195 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_05405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_13215 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CCASEI_08440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CCASEI_09010 glycoside hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CCASEI_02840 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] C 00053 Ascorbate and aldarate metabolism [PATH:ccg00053] D CCASEI_13015 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCASEI_05140 putative phosphotransferase system protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CCASEI_05145 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:ccg00500] D CCASEI_02835 PTS system sucrose-specific transporter subunit IIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CCASEI_09010 glycoside hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CCASEI_02840 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CCASEI_04785 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_10015 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_09000 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CCASEI_08575 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CCASEI_05805 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CCASEI_03605 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D CCASEI_04450 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CCASEI_08570 alpha-amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CCASEI_09005 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CCASEI_05705 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D CCASEI_12360 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CCASEI_12370 trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_11195 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_05405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_10145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ccg00520] D CCASEI_13030 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CCASEI_12430 PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CCASEI_11190 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CCASEI_12425 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CCASEI_03070 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CCASEI_03045 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CCASEI_09720 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CCASEI_12040 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CCASEI_02160 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CCASEI_11200 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D CCASEI_04730 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CCASEI_11665 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CCASEI_04860 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CCASEI_11195 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_05405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_06605 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_04785 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_10015 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_13015 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCASEI_09845 sulfolipid biosynthesis protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D CCASEI_05190 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CCASEI_06505 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CCASEI_13215 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CCASEI_10145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCASEI_10780 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CCASEI_10815 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CCASEI_10835 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CCASEI_09000 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ccg00620] D CCASEI_04175 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CCASEI_05115 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CCASEI_05320 dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_13985 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CCASEI_12775 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D CCASEI_12780 eutD; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCASEI_05785 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCASEI_13285 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03530 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_05860 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_12930 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CCASEI_12120 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CCASEI_10090 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D CCASEI_13390 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CCASEI_12320 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CCASEI_09490 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D CCASEI_08755 FAD linked oxidase domain-containing protein K18930 dld; D-lactate dehydrogenase D CCASEI_06835 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CCASEI_03495 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CCASEI_11010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCASEI_06130 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CCASEI_09550 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CCASEI_02725 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CCASEI_13075 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_01685 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ccg00630] D CCASEI_04175 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CCASEI_11010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCASEI_10265 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CCASEI_04230 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CCASEI_07340 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13285 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03530 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03595 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CCASEI_03600 hypothetical protein K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CCASEI_03590 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CCASEI_02485 glycolate oxidase subunit K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D CCASEI_01650 catalase K03781 katE; catalase [EC:1.11.1.6] D CCASEI_04880 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04915 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05210 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05270 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_09590 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCASEI_05315 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CCASEI_05310 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_05295 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CCASEI_05820 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CCASEI_10555 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CCASEI_08945 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CCASEI_09160 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CCASEI_09165 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CCASEI_09155 formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CCASEI_00230 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:ccg00640] D CCASEI_04175 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CCASEI_12775 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D CCASEI_12780 eutD; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_13285 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03530 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_03595 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CCASEI_03600 hypothetical protein K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CCASEI_03590 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CCASEI_00135 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCASEI_00140 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CCASEI_04200 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CCASEI_03490 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D CCASEI_11970 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CCASEI_03480 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CCASEI_03485 PEP phosphonomutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D CCASEI_13390 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:ccg00650] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13720 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_13715 hypothetical protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_02095 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCASEI_02100 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCASEI_02090 Succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_04250 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10865 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10895 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_12120 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CCASEI_13790 3-oxoadipate CoA-transferase subunit alpha K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CCASEI_13785 hypothetical protein K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CCASEI_04050 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08360 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_12235 thiamine pyrophosphate binding domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08355 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CCASEI_03650 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:ccg00660] D CCASEI_04050 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08360 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_12235 thiamine pyrophosphate binding domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08355 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CCASEI_03650 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CCASEI_00135 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CCASEI_00140 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CCASEI_08060 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CCASEI_08055 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CCASEI_08325 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ccg00562] D CCASEI_05755 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CCASEI_06610 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CCASEI_13585 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CCASEI_04200 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CCASEI_07495 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ccg00190] D CCASEI_07115 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CCASEI_02095 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CCASEI_02100 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CCASEI_02090 Succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CCASEI_05380 ubiquinol-cytochrome c reductase iron-sulfur protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CCASEI_05385 ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D CCASEI_05375 ubiquinol-cytochrome c reductase cytochrome C subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D CCASEI_07460 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CCASEI_05365 hypothetical protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D CCASEI_05370 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CCASEI_11460 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CCASEI_05360 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CCASEI_07450 cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CCASEI_03280 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CCASEI_03275 cytochrome D terminal oxidase polypeptide subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CCASEI_08625 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CCASEI_08615 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CCASEI_08620 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CCASEI_08630 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CCASEI_08610 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CCASEI_08645 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CCASEI_08635 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CCASEI_08640 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CCASEI_12610 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CCASEI_12645 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ccg00680] D CCASEI_09160 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CCASEI_09165 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CCASEI_09155 formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CCASEI_09590 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCASEI_09675 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCASEI_02725 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CCASEI_11010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCASEI_12815 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CCASEI_09545 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CCASEI_08440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CCASEI_12775 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] D CCASEI_12780 eutD; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCASEI_04175 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CCASEI_02250 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCASEI_08335 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CCASEI_10270 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CCASEI_11455 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ccg00910] D CCASEI_00230 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D CCASEI_08695 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CCASEI_01170 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01250 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01325 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01175 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01255 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01330 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01260 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01335 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01180 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_08700 narZ; nitrate reductase Z subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08705 narY; nitrate reductase Z subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08715 Nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_09770 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CCASEI_05825 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CCASEI_04880 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04915 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05210 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05270 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04875 hypothetical protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CCASEI_04870 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CCASEI_12465 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ccg00920] D CCASEI_01820 aliphatic sulfonate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CCASEI_06850 oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CCASEI_13900 NADPH-dependent nitro/flavin reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CCASEI_12975 Sulfate adenyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CCASEI_12980 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CCASEI_10200 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CCASEI_06190 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CCASEI_12985 adenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CCASEI_10810 sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D CCASEI_12840 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CCASEI_03535 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CCASEI_12055 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CCASEI_12050 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CCASEI_03310 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CCASEI_11100 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ccg00061] D CCASEI_13285 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03530 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_05075 hypothetical protein K02078 acpP; acyl carrier protein D CCASEI_11355 fatty-acid synthase II K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CCASEI_02190 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CCASEI_09950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCASEI_04455 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02225 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02230 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02235 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ccg00071] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_04185 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CCASEI_04455 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02225 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02230 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02235 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_11950 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CCASEI_13985 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ccg00561] D CCASEI_05820 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CCASEI_10555 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_13240 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CCASEI_07720 hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D CCASEI_05410 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CCASEI_13180 trehalose corynomycolyl transferase B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CCASEI_02075 corynomycolyl transferase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CCASEI_12215 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CCASEI_00980 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CCASEI_09845 sulfolipid biosynthesis protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] C 00564 Glycerophospholipid metabolism [PATH:ccg00564] D CCASEI_08040 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CCASEI_05410 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CCASEI_13345 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CCASEI_06050 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CCASEI_06285 Phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CCASEI_06720 phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CCASEI_12735 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:ccg00600] D CCASEI_03525 BNR/Asp-box repeat-containing protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D CCASEI_06750 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ccg00230] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_09725 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CCASEI_12195 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CCASEI_12290 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CCASEI_10110 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CCASEI_12795 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CCASEI_12245 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CCASEI_12255 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CCASEI_12250 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CCASEI_12190 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CCASEI_03655 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CCASEI_03660 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CCASEI_12280 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CCASEI_12285 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CCASEI_10105 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CCASEI_06795 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CCASEI_06805 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CCASEI_05070 pyridoxal phosphate phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CCASEI_05530 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CCASEI_00855 inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D CCASEI_01415 putative inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CCASEI_12595 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CCASEI_03150 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CCASEI_03155 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CCASEI_10985 ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CCASEI_11400 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CCASEI_03175 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CCASEI_09030 CMP/dCMP deaminase zinc-binding protein K01487 guaD; guanine deaminase [EC:3.5.4.3] D CCASEI_07595 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CCASEI_11885 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CCASEI_11875 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCASEI_01355 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCASEI_04705 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D CCASEI_06800 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CCASEI_02280 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CCASEI_09655 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CCASEI_02015 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CCASEI_12800 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CCASEI_03410 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CCASEI_01000 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CCASEI_02930 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CCASEI_06715 hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CCASEI_12975 Sulfate adenyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CCASEI_12980 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:ccg00240] D CCASEI_07610 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CCASEI_07615 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CCASEI_07625 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CCASEI_07620 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CCASEI_07290 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CCASEI_12830 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CCASEI_07605 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CCASEI_06040 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CCASEI_10985 ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CCASEI_03585 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CCASEI_04865 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CCASEI_07655 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CCASEI_06805 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CCASEI_05070 pyridoxal phosphate phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CCASEI_01415 putative inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CCASEI_03440 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CCASEI_07630 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CCASEI_00530 cytosine deaminase-related metal-dependent hydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CCASEI_00495 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CCASEI_13020 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CCASEI_11885 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CCASEI_11875 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCASEI_01355 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCASEI_10765 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CCASEI_06625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CCASEI_10205 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CCASEI_06250 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CCASEI_00920 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ccg00250] D CCASEI_13375 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CCASEI_05605 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CCASEI_05355 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CCASEI_13000 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCASEI_11115 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CCASEI_07250 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CCASEI_07795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CCASEI_07790 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CCASEI_12800 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CCASEI_12285 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CCASEI_07625 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_04250 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10865 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10895 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_04875 hypothetical protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CCASEI_04870 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CCASEI_05825 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CCASEI_12960 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CCASEI_04880 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04915 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05210 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05270 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_07610 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CCASEI_07615 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CCASEI_11330 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CCASEI_12250 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CCASEI_03070 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CCASEI_12195 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ccg00260] D CCASEI_01670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CCASEI_01665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCASEI_08775 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CCASEI_08770 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CCASEI_05240 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CCASEI_00570 Low specificity L-threonine aldolase LtaE K01620 ltaE; threonine aldolase [EC:4.1.2.48] D CCASEI_09590 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCASEI_05820 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CCASEI_10555 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CCASEI_02250 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCASEI_08335 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CCASEI_10270 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CCASEI_11455 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CCASEI_05315 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CCASEI_05310 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_05295 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CCASEI_03545 choline dehydrogenase K17755 codA; choline oxidase [EC:1.1.3.17] D CCASEI_03550 NAD-dependent aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CCASEI_00925 sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D CCASEI_01105 sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D CCASEI_06845 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CCASEI_05665 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CCASEI_13970 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CCASEI_13965 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ccg00270] D CCASEI_12055 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CCASEI_12050 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CCASEI_04410 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CCASEI_00750 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CCASEI_05650 epoxyalkane:coenzyme M transferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CCASEI_07580 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CCASEI_12970 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CCASEI_05530 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CCASEI_11370 DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CCASEI_10905 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CCASEI_01670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CCASEI_01665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCASEI_08775 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CCASEI_03310 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CCASEI_11100 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CCASEI_03315 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CCASEI_05335 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCASEI_12840 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CCASEI_03535 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CCASEI_13390 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CCASEI_11010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CCASEI_06845 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CCASEI_08335 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CCASEI_10270 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ccg00280] D CCASEI_05335 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_13285 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03530 acyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CCASEI_03595 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CCASEI_03600 hypothetical protein K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CCASEI_03590 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CCASEI_04205 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CCASEI_02355 6-phosphogluconate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CCASEI_04200 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_13790 3-oxoadipate CoA-transferase subunit alpha K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CCASEI_13785 hypothetical protein K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ccg00290] D CCASEI_05665 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CCASEI_08060 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CCASEI_08055 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CCASEI_08325 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CCASEI_04050 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08360 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_12235 thiamine pyrophosphate binding domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08355 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CCASEI_08350 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CCASEI_08370 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CCASEI_05335 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCASEI_13000 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCASEI_01685 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ccg00300] D CCASEI_08775 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CCASEI_01670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CCASEI_01665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCASEI_11185 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCASEI_06255 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCASEI_09245 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCASEI_06245 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CCASEI_09060 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CCASEI_07810 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CCASEI_10350 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CCASEI_09050 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CCASEI_06390 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CCASEI_08780 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CCASEI_01620 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CCASEI_03765 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D CCASEI_05485 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CCASEI_05490 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ccg00310] D CCASEI_04100 hypothetical protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_04185 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_03820 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_04250 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10865 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10895 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ccg00220] D CCASEI_07805 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CCASEI_07795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CCASEI_07790 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CCASEI_11330 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CCASEI_12250 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CCASEI_04880 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04915 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05210 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05270 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_07610 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CCASEI_07615 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CCASEI_05825 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CCASEI_13000 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCASEI_07820 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CCASEI_12725 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D CCASEI_07815 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CCASEI_07825 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CCASEI_07810 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:ccg00330] D CCASEI_00530 cytosine deaminase-related metal-dependent hydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CCASEI_00495 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_03820 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D CCASEI_04055 agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D CCASEI_13415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_13320 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_02290 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CCASEI_12960 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CCASEI_10955 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CCASEI_10915 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:ccg00340] D CCASEI_07255 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CCASEI_07260 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CCASEI_05765 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CCASEI_05750 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CCASEI_05745 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CCASEI_05760 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CCASEI_05735 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CCASEI_13910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_05730 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_10455 histidinolphosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D CCASEI_05725 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CCASEI_08895 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CCASEI_08890 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CCASEI_08885 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CCASEI_08910 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:ccg00350] D CCASEI_13910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_05730 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_13985 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CCASEI_13860 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D CCASEI_13870 hypothetical protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D CCASEI_13850 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D CCASEI_13845 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D CCASEI_04250 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10865 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10895 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_09750 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:ccg00360] D CCASEI_13665 hypothetical protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D CCASEI_13675 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CCASEI_13680 paaA; phenylacetate-CoA oxygenase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D CCASEI_13685 paaB; phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D CCASEI_13690 phenylacetate-CoA oxygenase subunit PaaI K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D CCASEI_13695 hypothetical protein K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D CCASEI_13700 phenylacetic acid degradation NADH oxidoreductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D CCASEI_13730 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_13720 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CCASEI_13910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_05730 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_03625 D-amino acid dehydrogenase (deaminating) K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CCASEI_13415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_13320 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_11950 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:ccg00380] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_04185 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_13415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_13320 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_01650 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ccg00400] D CCASEI_09610 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CCASEI_05425 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CCASEI_06920 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CCASEI_06925 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CCASEI_03730 hypothetical protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D CCASEI_03735 quinate/shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D CCASEI_06915 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CCASEI_10710 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CCASEI_06910 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CCASEI_13945 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CCASEI_13950 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CCASEI_13955 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CCASEI_05750 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CCASEI_05775 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CCASEI_13960 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CCASEI_13970 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CCASEI_13965 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CCASEI_10135 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CCASEI_01575 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CCASEI_13315 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D CCASEI_13910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_05730 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ccg00410] D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CCASEI_03820 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D CCASEI_00125 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CCASEI_12550 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CCASEI_00920 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_04200 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:ccg00430] D CCASEI_11115 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CCASEI_12780 eutD; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CCASEI_12775 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:ccg00450] D CCASEI_11100 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CCASEI_04410 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CCASEI_00750 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CCASEI_05650 epoxyalkane:coenzyme M transferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CCASEI_07405 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CCASEI_14100 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CCASEI_12975 Sulfate adenyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CCASEI_12980 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CCASEI_09145 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CCASEI_09140 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CCASEI_09930 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ccg00460] D CCASEI_05605 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CCASEI_09590 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCASEI_00230 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:ccg00470] D CCASEI_03075 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CCASEI_08035 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCASEI_11330 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CCASEI_12250 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CCASEI_11415 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CCASEI_05500 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CCASEI_06390 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CCASEI_08780 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CCASEI_01620 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CCASEI_04055 agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D CCASEI_03625 D-amino acid dehydrogenase (deaminating) K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ccg00480] D CCASEI_13275 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CCASEI_12705 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CCASEI_05330 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CCASEI_11085 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CCASEI_14090 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CCASEI_03345 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CCASEI_07095 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CCASEI_07475 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:ccg00515] D CCASEI_09945 dolichyl-phosphate-mannose--protein O-mannosyl transferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:ccg00514] D CCASEI_09945 dolichyl-phosphate-mannose--protein O-mannosyl transferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ccg00511] D CCASEI_03525 BNR/Asp-box repeat-containing protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:ccg00542] D CCASEI_08655 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ccg00541] D CCASEI_04785 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_10015 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CCASEI_06505 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CCASEI_13215 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CCASEI_13015 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CCASEI_02050 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCASEI_02060 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CCASEI_02055 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D CCASEI_10780 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CCASEI_10815 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CCASEI_09720 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CCASEI_04730 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CCASEI_11665 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CCASEI_04860 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:ccg00550] D CCASEI_12040 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CCASEI_02160 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CCASEI_05515 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CCASEI_05500 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CCASEI_05485 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CCASEI_08035 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCASEI_05490 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CCASEI_04645 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CCASEI_07280 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCASEI_03170 putative integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCASEI_05495 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CCASEI_05510 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CCASEI_05480 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CCASEI_00800 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D CCASEI_03405 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CCASEI_12605 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCASEI_01695 putative secreted protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CCASEI_01700 hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:ccg00552] D CCASEI_07280 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCASEI_03170 putative integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCASEI_08655 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ccg00543] D CCASEI_08655 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CCASEI_12055 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ccg00730] D CCASEI_03790 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CCASEI_00620 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CCASEI_08540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCASEI_05090 D-amino acid oxidase flavoprotein oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D CCASEI_06645 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CCASEI_05100 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CCASEI_00585 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CCASEI_05085 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CCASEI_00590 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CCASEI_08015 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CCASEI_10715 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CCASEI_02930 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CCASEI_00610 TENA/THI-4 protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CCASEI_00615 putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:ccg00740] D CCASEI_07540 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CCASEI_07550 riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CCASEI_07535 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CCASEI_07545 Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CCASEI_06215 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CCASEI_06850 oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CCASEI_13900 NADPH-dependent nitro/flavin reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CCASEI_00585 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:ccg00750] D CCASEI_04540 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CCASEI_10270 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CCASEI_05240 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CCASEI_01570 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:ccg00760] D CCASEI_13375 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CCASEI_09430 L-aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D CCASEI_13380 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CCASEI_13370 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CCASEI_11440 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CCASEI_06805 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CCASEI_05070 pyridoxal phosphate phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CCASEI_04285 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CCASEI_10630 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CCASEI_11910 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CCASEI_06290 competence-and mitomycin-induced protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CCASEI_05030 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CCASEI_01030 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CCASEI_07710 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CCASEI_04250 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10865 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CCASEI_10895 hypothetical protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ccg00770] D CCASEI_04050 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08360 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_12235 thiamine pyrophosphate binding domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CCASEI_08355 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CCASEI_08350 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CCASEI_08370 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CCASEI_00130 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CCASEI_10910 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CCASEI_00125 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CCASEI_12550 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CCASEI_09595 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CCASEI_07585 phosphopantothenate cysteine ligase / 4'-phospho-pantothenoyl-cysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CCASEI_07990 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CCASEI_07915 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CCASEI_11350 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CCASEI_05335 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCASEI_00920 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ccg00780] D CCASEI_09950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCASEI_00910 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CCASEI_03635 biotin holoenzyme synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ccg00785] D CCASEI_05290 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CCASEI_05285 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CCASEI_06570 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_05115 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CCASEI_05320 dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CCASEI_08945 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CCASEI_05315 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CCASEI_05310 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CCASEI_05295 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ccg00790] D CCASEI_12585 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CCASEI_12575 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CCASEI_12570 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CCASEI_12580 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CCASEI_10210 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CCASEI_11000 dihydrofolate synthase / folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CCASEI_07540 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CCASEI_13145 aminodeoxychorismate synthase, component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D CCASEI_12175 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CCASEI_08725 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CCASEI_08735 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CCASEI_01520 molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CCASEI_10010 molybdenum cofactor synthesis domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CCASEI_08730 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CCASEI_01530 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CCASEI_08740 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ccg00670] D CCASEI_10210 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CCASEI_07245 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CCASEI_03300 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CCASEI_09590 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CCASEI_10110 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CCASEI_10105 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CCASEI_07565 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CCASEI_11780 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CCASEI_05310 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CCASEI_10205 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CCASEI_06250 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CCASEI_00745 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CCASEI_10020 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ccg00860] D CCASEI_01745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08275 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_02315 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CCASEI_02370 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CCASEI_02330 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CCASEI_02320 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CCASEI_02345 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CCASEI_02350 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CCASEI_09250 amine oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CCASEI_07325 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CCASEI_06660 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D CCASEI_02325 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CCASEI_10790 putative uroporphyrinogen III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CCASEI_07460 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CCASEI_07450 cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CCASEI_07170 cobalamin biosynthesis protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D CCASEI_05340 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CCASEI_05170 Ribonuclease HI K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CCASEI_09285 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D CCASEI_01005 Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ccg00130] D CCASEI_02560 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CCASEI_08280 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CCASEI_02545 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CCASEI_02505 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CCASEI_02450 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CCASEI_02500 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CCASEI_07100 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D CCASEI_02425 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CCASEI_07780 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ccg00900] D CCASEI_06645 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CCASEI_06085 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CCASEI_12440 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CCASEI_09905 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CCASEI_12435 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CCASEI_06095 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CCASEI_09520 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_04425 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CCASEI_05445 polyprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CCASEI_09605 UDP pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CCASEI_04645 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:ccg00906] D CCASEI_12500 putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:ccg00907] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CCASEI_07465 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ccg00523] D CCASEI_02050 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCASEI_02060 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CCASEI_02055 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D CCASEI_08280 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D CCASEI_02060 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ccg00332] D CCASEI_10955 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CCASEI_10915 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ccg00261] D CCASEI_12975 Sulfate adenyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CCASEI_12980 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CCASEI_01670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CCASEI_01665 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CCASEI_11185 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCASEI_06255 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCASEI_09245 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CCASEI_06245 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ccg00521] D CCASEI_11195 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_05405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_12010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CCASEI_13585 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CCASEI_05755 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CCASEI_06610 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CCASEI_02050 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCASEI_02060 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CCASEI_02055 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CCASEI_11195 hypothetical protein K25026 glk; glucokinase [EC:2.7.1.2] D CCASEI_05405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ccg00525] D CCASEI_02050 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CCASEI_02060 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ccg00401] D CCASEI_01575 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CCASEI_13910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_05730 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CCASEI_13945 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CCASEI_13950 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CCASEI_09950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:ccg00998] D CCASEI_05075 hypothetical protein K02078 acpP; acyl carrier protein D CCASEI_01785 cystathionine beta-synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] C 00999 Biosynthesis of various plant secondary metabolites D CCASEI_07580 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites D CCASEI_01785 cystathionine beta-synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ccg00362] D CCASEI_13805 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CCASEI_13840 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D CCASEI_03715 protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CCASEI_03710 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D CCASEI_03720 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D CCASEI_03725 gamma-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CCASEI_04185 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CCASEI_13720 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:ccg00627] D CCASEI_13415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_13320 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_05860 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CCASEI_13880 phenol 2-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation D CCASEI_13840 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:ccg00625] D CCASEI_13985 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CCASEI_03125 benzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ccg00361] D CCASEI_13840 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00623 Toluene degradation [PATH:ccg00623] D CCASEI_13880 phenol 2-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D CCASEI_13840 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:ccg00633] D CCASEI_11205 hypothetical protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:ccg00643] D CCASEI_13415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CCASEI_13320 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation D CCASEI_04165 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:ccg00626] D CCASEI_13985 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D CCASEI_03715 protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CCASEI_03710 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ccg03020] D CCASEI_02675 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CCASEI_02680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CCASEI_02975 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CCASEI_07590 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CCASEI_10340 UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ccg03010] D CCASEI_07930 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CCASEI_06030 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CCASEI_02800 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CCASEI_02970 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CCASEI_02910 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CCASEI_13565 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CCASEI_02710 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CCASEI_02895 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CCASEI_03040 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CCASEI_02765 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CCASEI_02965 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CCASEI_02705 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CCASEI_02960 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CCASEI_10070 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CCASEI_06225 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CCASEI_05930 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CCASEI_02815 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CCASEI_10075 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CCASEI_02790 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CCASEI_04345 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CCASEI_02605 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CCASEI_02785 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CCASEI_02770 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CCASEI_02775 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CCASEI_02875 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CCASEI_02900 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CCASEI_02625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CCASEI_13555 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CCASEI_02615 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CCASEI_02600 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CCASEI_03035 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CCASEI_02865 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CCASEI_02920 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CCASEI_02805 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CCASEI_02980 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CCASEI_02905 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CCASEI_05975 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CCASEI_07850 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CCASEI_10970 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CCASEI_02795 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CCASEI_02780 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CCASEI_02870 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CCASEI_09740 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CCASEI_10965 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CCASEI_10060 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CCASEI_02810 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CCASEI_02915 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CCASEI_10055 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CCASEI_10050 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CCASEI_10065 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CCASEI_14150 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CCASEI_07855 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CCASEI_11900 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CCASEI_r14271 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14273 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14267 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14277 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14281 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14279 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14263 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ccg00970] D CCASEI_t14159 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCASEI_t14161 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCASEI_t14243 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCASEI_t14169 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14217 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14235 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14187 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CCASEI_t14247 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCASEI_t14249 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCASEI_t14199 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CCASEI_t14223 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCASEI_t14215 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCASEI_t14251 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCASEI_t14213 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCASEI_t14211 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCASEI_t14193 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14203 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14197 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14233 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14257 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14237 tRNA-His K14226 tRNA-His; tRNA His D CCASEI_t14157 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CCASEI_t14207 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14221 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14241 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14209 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14163 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14239 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCASEI_t14253 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCASEI_t14229 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14227 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14189 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14183 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14245 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CCASEI_t14205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCASEI_t14231 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCASEI_t14175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCASEI_t14165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14167 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14171 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14173 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14255 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCASEI_t14181 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCASEI_t14177 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCASEI_t14185 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CCASEI_t14179 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CCASEI_t14191 tRNA-Val K14237 tRNA-Val; tRNA Val D CCASEI_t14195 tRNA-Val K14237 tRNA-Val; tRNA Val D CCASEI_t14201 tRNA-Val K14237 tRNA-Val; tRNA Val D CCASEI_t14219 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CCASEI_01745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08275 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08465 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CCASEI_08420 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CCASEI_08470 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CCASEI_06885 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CCASEI_06870 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CCASEI_04660 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CCASEI_06710 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CCASEI_13255 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CCASEI_09140 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CCASEI_12420 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CCASEI_09930 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CCASEI_07565 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CCASEI_11780 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CCASEI_11005 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CCASEI_13815 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCASEI_05560 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CCASEI_12515 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CCASEI_08785 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCASEI_06155 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CCASEI_06840 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CCASEI_07835 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CCASEI_07830 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CCASEI_07745 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CCASEI_03390 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ccg03060] D CCASEI_02925 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCASEI_02590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCASEI_07490 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCASEI_06780 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CCASEI_06785 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CCASEI_06775 preprotein translocase subunit YajC-like protein K03210 yajC; preprotein translocase subunit YajC D CCASEI_13475 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_14135 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_07015 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_10735 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_05920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CCASEI_05870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCASEI_12545 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CCASEI_08980 Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB D CCASEI_07195 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC D CCASEI_05985 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CCASEI_05990 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CCASEI_05620 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ccg04122] D CCASEI_08540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCASEI_12840 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CCASEI_03535 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CCASEI_08520 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CCASEI_01520 molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CCASEI_08725 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CCASEI_01535 molybdopterin biosynthesis protein MoaD2 K03636 moaD; sulfur-carrier protein D CCASEI_01515 molybdopterin biosynthesis protein MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CCASEI_05105 thiamine biosynthesis protein ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CCASEI_08735 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CCASEI_05095 thiamin biosynthesis ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome D CCASEI_07225 ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:ccg03018] D CCASEI_10975 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CCASEI_09675 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCASEI_06230 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CCASEI_08865 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CCASEI_08675 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CCASEI_06260 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CCASEI_12955 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCASEI_12655 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_12645 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CCASEI_14050 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ccg03030] D CCASEI_08305 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_08495 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_05700 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_05645 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCASEI_01720 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCASEI_02020 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCASEI_04320 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCASEI_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCASEI_13550 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CCASEI_04720 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CCASEI_11145 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_13560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_11840 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_05170 Ribonuclease HI K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CCASEI_05995 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CCASEI_08490 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ccg03410] D CCASEI_01875 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CCASEI_08010 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CCASEI_12470 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CCASEI_05850 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CCASEI_13615 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CCASEI_10190 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CCASEI_09995 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CCASEI_12100 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CCASEI_09185 TDG/mug DNA glycosylase family protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CCASEI_12730 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CCASEI_03380 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CCASEI_08490 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ccg03420] D CCASEI_09695 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CCASEI_07875 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CCASEI_07910 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CCASEI_07525 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CCASEI_10625 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_10640 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_10130 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_08490 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCASEI_10340 UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:ccg03430] D CCASEI_10625 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_10640 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_10130 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_09525 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CCASEI_09530 exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CCASEI_11145 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_13560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_11840 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_05645 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCASEI_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCASEI_01720 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCASEI_04320 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCASEI_02020 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCASEI_08305 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_08495 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_05700 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_08490 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCASEI_04340 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ccg03440] D CCASEI_11145 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_13560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_11840 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_00015 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D CCASEI_04640 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CCASEI_01710 recR; recombination protein RecR K06187 recR; recombination protein RecR D CCASEI_06330 recA; recombinase A K03553 recA; recombination protein RecA D CCASEI_06765 holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CCASEI_06770 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CCASEI_06760 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CCASEI_00630 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_08000 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_13110 divergent AAA domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_11265 ATPase, AAA_4 family protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_05645 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCASEI_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCASEI_01720 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCASEI_04320 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCASEI_02020 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCASEI_08305 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_08495 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_05700 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_07575 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ccg03250] D CCASEI_00760 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ccg02010] D CCASEI_01170 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01250 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01325 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01175 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01255 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01330 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01260 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01335 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01180 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01820 aliphatic sulfonate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CCASEI_08760 putative molybdate transport system solute-binding protein K02020 modA; molybdate transport system substrate-binding protein D CCASEI_08765 molybdate transport system permease K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CCASEI_00710 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CCASEI_07385 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D CCASEI_00700 choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_00705 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_07365 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_07380 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_00695 ABC-type proline/glycine betaine transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CCASEI_07375 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CCASEI_07150 putative sugar ABC transport syste ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CCASEI_03630 hypothetical protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D CCASEI_03620 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D CCASEI_03615 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D CCASEI_03995 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D CCASEI_04000 hypothetical protein K10440 rbsC; ribose transport system permease protein D CCASEI_04005 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CCASEI_03985 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CCASEI_12150 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CCASEI_12145 phosphate uptake system permease K02037 pstC; phosphate transport system permease protein D CCASEI_12140 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D CCASEI_12135 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CCASEI_04075 glutamate ABC transport system, solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CCASEI_06350 glutamate-binding protein GluB K10005 gluB; glutamate transport system substrate-binding protein D CCASEI_06345 glutamate ABC transport system, permease K10006 gluC; glutamate transport system permease protein D CCASEI_06340 glutamate ABC transport system, permease K10007 gluD; glutamate transport system permease protein D CCASEI_06355 glutamate transporter ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CCASEI_03255 D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D CCASEI_12880 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D CCASEI_03245 methionine ABC transport system, permease K02072 metI; D-methionine transport system permease protein D CCASEI_12870 ABC transporter permease K02072 metI; D-methionine transport system permease protein D CCASEI_03250 methionine ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CCASEI_12875 metal ion ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CCASEI_01910 iron ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCASEI_01905 iron ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CCASEI_01900 putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein D CCASEI_01895 iron ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CCASEI_03520 extracellular solute-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D CCASEI_03505 oligopeptide transport system permease appB K13890 gsiC; glutathione transport system permease protein D CCASEI_03510 oligopeptide transport system permease K13891 gsiD; glutathione transport system permease protein D CCASEI_03515 glutathione import ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D CCASEI_11940 ABC transporter substrate-binding protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein D CCASEI_02025 iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_12265 ABC-type cobalamin/Fe3+-siderophores transport system, component K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_03370 Fe3+-hydroxamate ABC transporter periplasmic protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_10510 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_03365 ABC-type cobalamin/Fe3+-siderophores transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CCASEI_10540 hypothetical protein K23186 fepD; iron-siderophore transport system permease protein D CCASEI_11935 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CCASEI_03360 Fe3+-siderophore ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CCASEI_10535 iron ABC transport system permease K23187 fepG; iron-siderophore transport system permease protein D CCASEI_11930 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CCASEI_03355 hypothetical protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CCASEI_10530 iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CCASEI_11925 iron-siderophore uptake ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CCASEI_02470 manganese ABC transporter substrate-binding lipoprotein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CCASEI_02460 manganese ABC transport system membrane protein K11708 troC; manganese/zinc/iron transport system permease protein D CCASEI_02455 manganese ABC transport system membrane protein K11709 troD; manganese/zinc/iron transport system permease protein D CCASEI_02465 manganese ABC transport system, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CCASEI_06305 BioY family protein K03523 bioY; biotin transport system substrate-specific component D CCASEI_06320 BioY family protein K03523 bioY; biotin transport system substrate-specific component D CCASEI_06310 cobalt subfamily permease K16783 bioN; biotin transport system permease protein D CCASEI_06315 ABC transport system, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CCASEI_00835 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D CCASEI_14358 putative cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D CCASEI_02695 permease of the major facilitator superfamily protein K16785 ecfT; energy-coupling factor transport system permease protein D CCASEI_01500 ABC transport system, permease K09690 wzm; homopolymeric O-antigen transport system permease protein D CCASEI_01495 ABC transport system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CCASEI_04750 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D CCASEI_04755 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CCASEI_13635 Macrolide export ATP-binding/permease macB K09813 hrtB; hemin transport system permease protein D CCASEI_13630 antimicrobial peptide ABC transporter ATPase K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CCASEI_10435 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CCASEI_10440 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D CCASEI_10165 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CCASEI_10170 putative ABC transport system K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CCASEI_03265 ABC-type multidrug/protein/lipid transport system, ATPase component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CCASEI_03270 ABC transporter ATPase and permease K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CCASEI_00115 ABC transporter permease K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ccg02060] D CCASEI_06435 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CCASEI_06420 Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CCASEI_12430 PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CCASEI_02835 PTS system sucrose-specific transporter subunit IIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CCASEI_07925 PTS system glucose-specific transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CCASEI_05140 putative phosphotransferase system protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CCASEI_05145 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CCASEI_06425 fructose specific PTS system component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CCASEI_04145 PTS system mannose-specific transporter subunits IIBCA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CCASEI_06430 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:ccg03070] D CCASEI_06780 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CCASEI_06785 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CCASEI_02590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCASEI_07490 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCASEI_02925 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCASEI_06775 preprotein translocase subunit YajC-like protein K03210 yajC; preprotein translocase subunit YajC D CCASEI_13475 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_14135 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_07015 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_10735 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_05870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCASEI_05920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CCASEI_08980 Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB D CCASEI_07195 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC D CCASEI_11825 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:ccg02020] D CCASEI_02255 sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CCASEI_02260 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CCASEI_12150 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CCASEI_04245 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CCASEI_04240 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CCASEI_04235 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CCASEI_07450 cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CCASEI_10045 serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CCASEI_10755 two-component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CCASEI_10760 sensor kinase K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CCASEI_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CCASEI_08700 narZ; nitrate reductase Z subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08705 narY; nitrate reductase Z subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08715 Nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08710 respiratory nitrate reductase delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CCASEI_12855 two-component sensory kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CCASEI_12860 hypothetical protein K07693 desR; two-component system, NarL family, response regulator DesR D CCASEI_01940 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CCASEI_01945 hypothetical protein K12510 tadB; tight adherence protein B D CCASEI_05915 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CCASEI_05910 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D CCASEI_04880 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04915 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05210 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05270 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_03750 TRAP dicarboxylate transporter subunit DctQ K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D CCASEI_01870 transcriptional regulator, Crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CCASEI_11330 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CCASEI_03280 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CCASEI_03275 cytochrome D terminal oxidase polypeptide subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CCASEI_05155 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CCASEI_04730 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CCASEI_11665 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CCASEI_04860 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ccg02024] D CCASEI_10905 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CCASEI_13945 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CCASEI_13950 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CCASEI_09610 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CCASEI_05425 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CCASEI_11320 substrate-binding transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CCASEI_11290 ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CCASEI_11315 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CCASEI_11285 ABC transporter--like protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CCASEI_04455 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02225 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02230 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02235 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_01870 transcriptional regulator, Crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CCASEI_07550 riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CCASEI_01910 iron ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCASEI_01905 iron ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CCASEI_01900 putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein D CCASEI_01895 iron ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CCASEI_06790 dipeptide-binding protein DciAE K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_03680 dipeptide/oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_04390 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_07050 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_11175 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_11170 binding-protein-dependent transporters inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_03685 ABC-type dipeptide/oligopeptide/nickel transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_04385 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_07055 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_03690 dipeptide/oligopeptide ABC transporter inner membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CCASEI_04380 putative oligopeptide ABC transport system membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CCASEI_07060 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CCASEI_11165 oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_03695 ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_04375 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_07065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_11160 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D CCASEI_13475 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_14135 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_02590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCASEI_07490 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCASEI_02925 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCASEI_06775 preprotein translocase subunit YajC-like protein K03210 yajC; preprotein translocase subunit YajC D CCASEI_07015 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_10735 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_05870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCASEI_05920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CCASEI_03995 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D CCASEI_06600 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CCASEI_09675 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ccg01501] D CCASEI_13030 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CCASEI_01910 iron ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCASEI_01905 iron ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CCASEI_01900 putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein D CCASEI_01895 iron ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CCASEI_05480 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ccg01502] D CCASEI_08035 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCASEI_03075 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CCASEI_05490 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CCASEI_05495 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CCASEI_05510 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ccg01503] D CCASEI_14110 hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCASEI_00760 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ccg01000] C 01001 Protein kinases [BR:ccg01001] D CCASEI_12770 serine/threonine protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D CCASEI_00795 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CCASEI_01205 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CCASEI_01285 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CCASEI_05430 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CCASEI_00790 serine/threonine protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CCASEI_02255 sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CCASEI_10755 two-component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CCASEI_12300 two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CCASEI_12855 two-component sensory kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CCASEI_02580 two-component system sensor kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ccg01009] D CCASEI_00810 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CCASEI_11455 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ccg01002] D CCASEI_05620 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CCASEI_06905 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CCASEI_09190 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CCASEI_03175 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CCASEI_05395 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CCASEI_03430 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CCASEI_07330 cell wall-associated hydrolase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CCASEI_12195 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CCASEI_04875 hypothetical protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CCASEI_03070 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CCASEI_05355 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CCASEI_13895 intracellular protease K05520 yhbO; deglycase [EC:3.5.1.124] D CCASEI_00945 putative fimbrial associated sortase K07284 srtA; sortase A [EC:3.4.22.70] D CCASEI_13470 sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D CCASEI_13940 CAAX amino terminal protease K07052 K07052; CAAX protease family protein D CCASEI_13325 hypothetical protein K07052 K07052; CAAX protease family protein D CCASEI_00670 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D CCASEI_11085 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CCASEI_14090 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CCASEI_03340 peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CCASEI_01160 endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CCASEI_05330 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CCASEI_09050 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CCASEI_12665 hypothetical protein K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CCASEI_12660 hypothetical protein K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CCASEI_06105 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CCASEI_02935 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CCASEI_12590 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CCASEI_01145 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CCASEI_10045 serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CCASEI_03000 serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CCASEI_11520 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CCASEI_12275 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CCASEI_03405 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CCASEI_12605 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCASEI_11030 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CCASEI_11035 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CCASEI_10605 putative secreted protein K07177 K07177; Lon-like protease D CCASEI_06445 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CCASEI_05985 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CCASEI_05990 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CCASEI_02535 nisin-resistance protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:ccg01003] D CCASEI_07155 polyprenol-phosphate-mannose synthase domain 1 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CCASEI_09945 dolichyl-phosphate-mannose--protein O-mannosyl transferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D CCASEI_06730 glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CCASEI_05400 mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D CCASEI_02555 glycosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D CCASEI_09005 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CCASEI_08655 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CCASEI_08375 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CCASEI_00290 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CCASEI_12700 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CCASEI_05440 alpha mannopyranosyltransferase K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CCASEI_07430 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CCASEI_01365 arabinosyl transferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D CCASEI_01370 arabinofuranosyl transferase A K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D CCASEI_13185 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D CCASEI_06670 arabinofuranosyl transferase C K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D CCASEI_13045 hypothetical protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D CCASEI_01450 glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D CCASEI_13200 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D CCASEI_10840 glycosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D CCASEI_12360 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ccg01005] D CCASEI_08655 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ccg01011] D CCASEI_12040 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CCASEI_02160 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CCASEI_05515 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CCASEI_05500 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CCASEI_05485 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CCASEI_08035 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CCASEI_03075 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CCASEI_11415 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CCASEI_05495 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CCASEI_05510 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CCASEI_07280 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCASEI_03170 putative integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CCASEI_14065 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D CCASEI_05480 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CCASEI_00800 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D CCASEI_03405 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CCASEI_12605 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CCASEI_05395 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CCASEI_03430 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CCASEI_07330 cell wall-associated hydrolase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CCASEI_00945 putative fimbrial associated sortase K07284 srtA; sortase A [EC:3.4.22.70] D CCASEI_13470 sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D CCASEI_06895 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CCASEI_14110 hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ccg01004] D CCASEI_11355 fatty-acid synthase II K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CCASEI_02190 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CCASEI_09950 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CCASEI_06750 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CCASEI_13155 polyketide synthase K12437 pks13; polyketide synthase 13 D CCASEI_04175 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CCASEI_04455 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02225 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02230 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02235 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_13160 acyl-CoA synthase K12428 fadD32; fatty acid CoA ligase FadD32 D CCASEI_05410 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ccg01006] D CCASEI_05445 polyprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CCASEI_09605 UDP pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CCASEI_04645 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CCASEI_12500 putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CCASEI_06385 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CCASEI_02425 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CCASEI_07460 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CCASEI_13190 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:ccg01007] D CCASEI_01745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08275 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_07745 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CCASEI_03390 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CCASEI_12420 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CCASEI_08785 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCASEI_09930 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CCASEI_05560 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CCASEI_11005 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CCASEI_13815 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCASEI_12515 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CCASEI_06870 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CCASEI_06840 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CCASEI_04660 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CCASEI_13255 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CCASEI_06155 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CCASEI_06710 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CCASEI_06885 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CCASEI_07835 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CCASEI_07830 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CCASEI_13000 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CCASEI_10350 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CCASEI_13910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_05730 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CCASEI_04410 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CCASEI_07810 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CCASEI_04040 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CCASEI_02370 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CCASEI_05335 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CCASEI_10270 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ccg00194] D CCASEI_08610 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CCASEI_08615 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CCASEI_08620 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CCASEI_08625 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CCASEI_08630 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CCASEI_08635 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CCASEI_08640 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CCASEI_08645 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ccg03000] D CCASEI_11370 DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CCASEI_11670 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D CCASEI_06470 hypothetical protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CCASEI_08390 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CCASEI_13430 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CCASEI_06440 transcriptional regulator, DeoR family protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CCASEI_04010 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CCASEI_10505 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CCASEI_13260 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D CCASEI_05110 HTH-type transcriptional repressor K03710 K03710; GntR family transcriptional regulator D CCASEI_04395 HTH-type transcriptional repressor K03710 K03710; GntR family transcriptional regulator D CCASEI_11325 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CCASEI_01565 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CCASEI_05710 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CCASEI_07345 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D CCASEI_12045 transcriptional regulator, LuxR family protein K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D CCASEI_12940 heat shock protein regulator HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D CCASEI_04655 transcriptional regulator, FUR family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CCASEI_13795 hypothetical protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CCASEI_01870 transcriptional regulator, Crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CCASEI_14005 transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D CCASEI_09360 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CCASEI_09390 ArsR family transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CCASEI_03475 HTH-type transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D CCASEI_02085 transcriptional regulator, MerR family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D CCASEI_06295 transcription regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D CCASEI_08480 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator D CCASEI_06510 iron-dependent repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D CCASEI_02475 manganese-dependent repressor MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CCASEI_01345 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CCASEI_03635 biotin holoenzyme synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CCASEI_10490 XRE family plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCASEI_13425 transcriptional regulator K07729 K07729; putative transcriptional regulator D CCASEI_12960 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CCASEI_07920 transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D CCASEI_03130 WhiB transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CCASEI_10830 WhiB transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CCASEI_01850 WhiB transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CCASEI_10680 WhiB-family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CCASEI_12080 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CCASEI_14120 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CCASEI_11695 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CCASEI_12445 transcription factor K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CCASEI_07800 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CCASEI_04515 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D CCASEI_00610 TENA/THI-4 protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CCASEI_00615 putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CCASEI_08820 Phage shock protein C K03973 pspC; phage shock protein C D CCASEI_12935 stress-responsive transcriptional regulator K03973 pspC; phage shock protein C D CCASEI_07630 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CCASEI_14045 hypothetical protein K07735 algH; putative transcriptional regulator D CCASEI_06455 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CCASEI_05465 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ccg03021] D CCASEI_10340 UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CCASEI_02975 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CCASEI_02675 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CCASEI_02680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CCASEI_07590 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CCASEI_06600 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D CCASEI_06515 RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CCASEI_10695 ECF-family sigma factor H K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CCASEI_03135 RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CCASEI_01655 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CCASEI_08990 RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CCASEI_06170 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CCASEI_06940 N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB D CCASEI_02595 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CCASEI_09635 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CCASEI_08675 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ccg03019] D CCASEI_10975 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CCASEI_05845 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CCASEI_06260 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CCASEI_11220 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CCASEI_08865 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CCASEI_09675 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCASEI_06230 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CCASEI_08675 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CCASEI_12955 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCASEI_12655 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_12645 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CCASEI_14050 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CCASEI_04225 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D CCASEI_07520 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D CCASEI_07190 helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D CCASEI_06460 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CCASEI_01065 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ccg03011] D CCASEI_07930 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CCASEI_06030 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CCASEI_02800 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CCASEI_02970 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CCASEI_02910 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CCASEI_13565 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CCASEI_02710 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CCASEI_02895 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CCASEI_03040 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CCASEI_02765 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CCASEI_02965 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CCASEI_02705 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CCASEI_02960 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CCASEI_10070 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CCASEI_06225 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CCASEI_05930 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CCASEI_02815 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CCASEI_10075 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CCASEI_02790 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CCASEI_04345 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CCASEI_02605 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CCASEI_02785 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CCASEI_02770 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CCASEI_02775 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CCASEI_02875 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CCASEI_02900 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CCASEI_13555 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CCASEI_02615 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CCASEI_02600 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CCASEI_02625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CCASEI_03035 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CCASEI_02865 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CCASEI_02920 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CCASEI_02805 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CCASEI_02980 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CCASEI_02905 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CCASEI_05975 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CCASEI_07850 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CCASEI_10970 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CCASEI_02795 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CCASEI_02780 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CCASEI_02870 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CCASEI_10965 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CCASEI_10060 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CCASEI_02810 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CCASEI_02915 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CCASEI_10055 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CCASEI_10050 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CCASEI_10065 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CCASEI_14150 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CCASEI_07855 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CCASEI_11900 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CCASEI_09740 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CCASEI_r14259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14263 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14271 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14273 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14267 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14277 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14281 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14279 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ccg03009] D CCASEI_05845 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CCASEI_11220 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CCASEI_04635 era; GTPase Era K03595 era; GTPase D CCASEI_10960 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D CCASEI_06170 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CCASEI_06940 N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB D CCASEI_02595 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CCASEI_09910 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CCASEI_07560 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CCASEI_07995 DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CCASEI_04525 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CCASEI_14130 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CCASEI_05470 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CCASEI_09940 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CCASEI_07715 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CCASEI_09015 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CCASEI_12415 rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CCASEI_06060 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CCASEI_13500 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CCASEI_07660 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CCASEI_05625 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CCASEI_03095 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CCASEI_05935 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D CCASEI_10975 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CCASEI_06890 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CCASEI_08865 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CCASEI_10715 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CCASEI_07650 GTP-binding protein Der K03977 engA; GTPase D CCASEI_06405 GTP-binding protein K03665 hflX; GTPase D CCASEI_08660 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CCASEI_06800 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CCASEI_06185 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CCASEI_06165 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D CCASEI_01135 hypothetical protein K14761 rlbA; ribosome-associated protein D CCASEI_04290 hypothetical protein K09710 ybeB; ribosome-associated protein D CCASEI_04535 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor D CCASEI_09500 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D CCASEI_05840 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ccg03016] D CCASEI_05950 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D CCASEI_01745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08275 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_06155 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CCASEI_05560 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CCASEI_13815 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCASEI_09930 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CCASEI_08785 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCASEI_12515 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CCASEI_06870 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CCASEI_06885 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CCASEI_04660 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CCASEI_06710 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CCASEI_13255 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CCASEI_12420 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CCASEI_11005 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CCASEI_06840 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CCASEI_07835 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CCASEI_07830 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CCASEI_07745 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CCASEI_03390 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CCASEI_06520 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CCASEI_07230 tRNA(1-methyladenosine) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CCASEI_13080 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CCASEI_02990 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CCASEI_06210 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CCASEI_08540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCASEI_08660 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CCASEI_06385 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CCASEI_09145 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CCASEI_10200 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CCASEI_14145 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CCASEI_11405 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CCASEI_06650 ribonuclease D protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D CCASEI_10700 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CCASEI_01585 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CCASEI_06360 2-methylthioadenine synthetase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CCASEI_05940 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CCASEI_03295 rRNA methylase, SpoU class K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CCASEI_07840 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D CCASEI_13500 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CCASEI_08520 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CCASEI_12180 aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D CCASEI_01770 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CCASEI_12600 cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CCASEI_03090 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CCASEI_03100 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CCASEI_03080 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CCASEI_06230 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ccg03012] D CCASEI_06180 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CCASEI_07860 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CCASEI_06035 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CCASEI_02720 elongation factor Tu K02358 tuf; elongation factor Tu D CCASEI_02715 elongation factor G K02355 fusA; elongation factor G D CCASEI_09135 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D CCASEI_08670 peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1 D CCASEI_06045 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D CCASEI_08665 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CCASEI_09745 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CCASEI_09780 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CCASEI_02955 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CCASEI_06935 elongation factor P K02356 efp; elongation factor P D CCASEI_10445 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CCASEI_09790 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ccg03110] D CCASEI_12865 ATP-dependent Clp protease, ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CCASEI_12485 ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CCASEI_11020 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CCASEI_12955 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCASEI_12655 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_04520 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CCASEI_12945 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CCASEI_12950 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D CCASEI_05680 ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D CCASEI_03110 molecular chaperone protein K04078 groES; chaperonin GroES D CCASEI_12590 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CCASEI_08645 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CCASEI_06695 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CCASEI_06700 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CCASEI_03000 serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CCASEI_00760 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CCASEI_06825 hypothetical protein K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CCASEI_13530 thioredoxin K03671 TXN; thioredoxin D CCASEI_14105 thioredoxin K03671 TXN; thioredoxin D CCASEI_08580 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:ccg04131] D CCASEI_10985 ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CCASEI_12545 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CCASEI_09765 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCASEI_07505 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCASEI_02250 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCASEI_05785 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCASEI_12315 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:ccg04121] D CCASEI_07215 pupylation protein K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:ccg03051] D CCASEI_07225 ATPase K13527 mpa; proteasome-associated ATPase D CCASEI_07210 hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D CCASEI_07205 hypothetical protein K24033 pafBC; proteasome accessory factor BC D CCASEI_07220 hypothetical protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:ccg03032] D CCASEI_11370 DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CCASEI_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CCASEI_13550 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CCASEI_04720 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CCASEI_11145 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_13560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_11840 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_05645 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCASEI_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCASEI_04320 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCASEI_02020 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCASEI_08305 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_08495 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_05700 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01720 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCASEI_05170 Ribonuclease HI K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CCASEI_05995 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CCASEI_08490 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCASEI_04340 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CCASEI_00075 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CCASEI_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CCASEI_01995 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ccg03036] D CCASEI_11370 DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CCASEI_05845 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CCASEI_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CCASEI_03330 DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein D CCASEI_08390 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CCASEI_05865 chromosome segregation protein K03529 smc; chromosome segregation protein D CCASEI_07670 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D CCASEI_07665 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CCASEI_10440 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D CCASEI_05480 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CCASEI_06270 cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CCASEI_05520 cell division protein K03589 ftsQ; cell division protein FtsQ D CCASEI_05505 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CCASEI_10435 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CCASEI_05525 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CCASEI_14110 hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CCASEI_05540 cell division protein SepF K09772 sepF; cell division inhibitor SepF D CCASEI_07675 partitioning protein K03496 parA; chromosome partitioning protein D CCASEI_14125 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D CCASEI_14308 hypothetical protein K03496 parA; chromosome partitioning protein D CCASEI_14120 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CCASEI_11695 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CCASEI_14130 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CCASEI_06020 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CCASEI_07685 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CCASEI_08975 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CCASEI_07510 putative sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ccg03400] D CCASEI_12085 O6-methylguanine-DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CCASEI_12095 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CCASEI_08010 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CCASEI_12470 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CCASEI_01875 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CCASEI_10340 UvrABC system protein B K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CCASEI_03980 mutator protein mutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CCASEI_12755 mutator MutT3 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CCASEI_04025 Nudix hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CCASEI_00110 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CCASEI_00380 MutT-like domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CCASEI_06625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CCASEI_01075 hypothetical protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CCASEI_09185 TDG/mug DNA glycosylase family protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CCASEI_09995 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CCASEI_12100 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CCASEI_05850 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CCASEI_13615 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CCASEI_10190 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CCASEI_12730 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CCASEI_03380 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CCASEI_08490 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CCASEI_07875 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CCASEI_07910 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CCASEI_07525 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CCASEI_10625 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_10640 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_10130 ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CCASEI_02675 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CCASEI_02680 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CCASEI_02975 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CCASEI_07590 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CCASEI_09695 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CCASEI_09525 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CCASEI_09530 exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CCASEI_05645 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CCASEI_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CCASEI_04320 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CCASEI_02020 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CCASEI_08305 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_08495 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_05700 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CCASEI_01720 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CCASEI_11145 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_13560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_11840 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_04340 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CCASEI_06330 recA; recombinase A K03553 recA; recombination protein RecA D CCASEI_06765 holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CCASEI_06770 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CCASEI_06760 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CCASEI_07575 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CCASEI_12455 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CCASEI_00015 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D CCASEI_00630 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_08000 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_13110 divergent AAA domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_11265 ATPase, AAA_4 family protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CCASEI_04640 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CCASEI_01710 recR; recombination protein RecR K06187 recR; recombination protein RecR D CCASEI_07705 DNA repair protein RECN K03631 recN; DNA repair protein RecN (Recombination protein N) D CCASEI_04575 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 D CCASEI_00075 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CCASEI_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CCASEI_01995 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CCASEI_05600 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CCASEI_06445 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CCASEI_03230 DNA polymerase involved in DNA repair K14161 imuB; protein ImuB D CCASEI_03260 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CCASEI_11545 DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CCASEI_06335 recX; recombination regulator RecX K03565 recX; regulatory protein D CCASEI_11445 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CCASEI_10195 ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CCASEI_08045 NUDIX protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CCASEI_07690 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CCASEI_11885 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CCASEI_11875 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCASEI_01355 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CCASEI_06190 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ccg03029] D CCASEI_06180 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CCASEI_07860 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CCASEI_06035 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CCASEI_02720 elongation factor Tu K02358 tuf; elongation factor Tu D CCASEI_02715 elongation factor G K02355 fusA; elongation factor G D CCASEI_04635 era; GTPase Era K03595 era; GTPase D CCASEI_07745 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CCASEI_13815 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CCASEI_06870 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CCASEI_04660 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CCASEI_08785 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CCASEI_08465 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CCASEI_08420 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CCASEI_08470 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CCASEI_11145 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_13560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_11840 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CCASEI_12955 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCASEI_12950 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D CCASEI_12655 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_03110 molecular chaperone protein K04078 groES; chaperonin GroES D CCASEI_04520 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CCASEI_12945 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CCASEI_08540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CCASEI_08975 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CCASEI_07460 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CCASEI_07450 cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9] D CCASEI_13475 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_14135 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ccg02000] D CCASEI_10165 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CCASEI_10170 putative ABC transport system K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CCASEI_03900 ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CCASEI_04415 ABC transport system K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CCASEI_01705 ABC transporter NBP/MSD fusion protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CCASEI_03265 ABC-type multidrug/protein/lipid transport system, ATPase component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CCASEI_03270 ABC transporter ATPase and permease K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CCASEI_00115 ABC transporter permease K18230 tylC; macrolide transport system ATP-binding/permease protein D CCASEI_09900 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CCASEI_00730 ABC transporter K02021 ABC.MR; putative ABC transport system ATP-binding protein D CCASEI_08760 putative molybdate transport system solute-binding protein K02020 modA; molybdate transport system substrate-binding protein D CCASEI_08765 molybdate transport system permease K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CCASEI_01170 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01250 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01325 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CCASEI_01175 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01255 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01330 hypothetical protein K15577 nrtB; nitrate/nitrite transport system permease protein D CCASEI_01260 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01335 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01180 nitrate transport ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CCASEI_01820 aliphatic sulfonate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CCASEI_11320 substrate-binding transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CCASEI_11290 ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CCASEI_11315 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CCASEI_11285 ABC transporter--like protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CCASEI_00710 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CCASEI_07385 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D CCASEI_00700 choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_00705 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_07365 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_07380 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CCASEI_00695 ABC-type proline/glycine betaine transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CCASEI_07375 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CCASEI_00595 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CCASEI_00600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CCASEI_00605 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CCASEI_07150 putative sugar ABC transport syste ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CCASEI_03630 hypothetical protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D CCASEI_03620 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D CCASEI_03615 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D CCASEI_03995 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D CCASEI_04000 hypothetical protein K10440 rbsC; ribose transport system permease protein D CCASEI_04005 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CCASEI_12150 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CCASEI_12145 phosphate uptake system permease K02037 pstC; phosphate transport system permease protein D CCASEI_12140 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D CCASEI_12135 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CCASEI_04075 glutamate ABC transport system, solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CCASEI_06350 glutamate-binding protein GluB K10005 gluB; glutamate transport system substrate-binding protein D CCASEI_06345 glutamate ABC transport system, permease K10006 gluC; glutamate transport system permease protein D CCASEI_06340 glutamate ABC transport system, permease K10007 gluD; glutamate transport system permease protein D CCASEI_06355 glutamate transporter ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CCASEI_03255 D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D CCASEI_12880 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D CCASEI_03245 methionine ABC transport system, permease K02072 metI; D-methionine transport system permease protein D CCASEI_12870 ABC transporter permease K02072 metI; D-methionine transport system permease protein D CCASEI_03250 methionine ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CCASEI_12875 metal ion ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CCASEI_13935 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D CCASEI_13930 ABC transport system, permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D CCASEI_13925 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D CCASEI_12765 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CCASEI_07970 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CCASEI_07975 ABC transport system, permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CCASEI_07980 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CCASEI_01910 iron ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CCASEI_01905 iron ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D CCASEI_01900 putative peptide transport system membrane protein K15582 oppC; oligopeptide transport system permease protein D CCASEI_01895 iron ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CCASEI_03520 extracellular solute-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D CCASEI_03505 oligopeptide transport system permease appB K13890 gsiC; glutathione transport system permease protein D CCASEI_03510 oligopeptide transport system permease K13891 gsiD; glutathione transport system permease protein D CCASEI_03515 glutathione import ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D CCASEI_06790 dipeptide-binding protein DciAE K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_03680 dipeptide/oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_04390 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_07050 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_11175 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CCASEI_11170 binding-protein-dependent transporters inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_03685 ABC-type dipeptide/oligopeptide/nickel transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_04385 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_07055 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CCASEI_03690 dipeptide/oligopeptide ABC transporter inner membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CCASEI_04380 putative oligopeptide ABC transport system membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CCASEI_07060 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CCASEI_11165 oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_03695 ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_04375 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_07065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CCASEI_11160 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D CCASEI_11940 ABC transporter substrate-binding protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein D CCASEI_02025 iron ABC transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_12265 ABC-type cobalamin/Fe3+-siderophores transport system, component K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_03370 Fe3+-hydroxamate ABC transporter periplasmic protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_10510 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein D CCASEI_03365 ABC-type cobalamin/Fe3+-siderophores transport system, permease component K23186 fepD; iron-siderophore transport system permease protein D CCASEI_10540 hypothetical protein K23186 fepD; iron-siderophore transport system permease protein D CCASEI_11935 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CCASEI_03360 Fe3+-siderophore ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CCASEI_10535 iron ABC transport system permease K23187 fepG; iron-siderophore transport system permease protein D CCASEI_11930 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CCASEI_03355 hypothetical protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CCASEI_10530 iron ABC transport system ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CCASEI_11925 iron-siderophore uptake ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CCASEI_10380 iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D CCASEI_10370 ABC-type cobalamin/Fe3+-siderophore transport system, permease K25283 yclO; iron-siderophore transport system permease protein D CCASEI_10375 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein D CCASEI_10365 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D CCASEI_08090 ABC transporter periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CCASEI_03800 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CCASEI_09375 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CCASEI_08095 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CCASEI_08565 ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CCASEI_08100 phosphonate-transporting ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CCASEI_02470 manganese ABC transporter substrate-binding lipoprotein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CCASEI_02460 manganese ABC transport system membrane protein K11708 troC; manganese/zinc/iron transport system permease protein D CCASEI_02455 manganese ABC transport system membrane protein K11709 troD; manganese/zinc/iron transport system permease protein D CCASEI_02465 manganese ABC transport system, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CCASEI_06305 BioY family protein K03523 bioY; biotin transport system substrate-specific component D CCASEI_06320 BioY family protein K03523 bioY; biotin transport system substrate-specific component D CCASEI_06310 cobalt subfamily permease K16783 bioN; biotin transport system permease protein D CCASEI_06315 ABC transport system, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CCASEI_00840 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D CCASEI_00835 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D CCASEI_14358 putative cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D CCASEI_02695 permease of the major facilitator superfamily protein K16785 ecfT; energy-coupling factor transport system permease protein D CCASEI_14353 cation ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CCASEI_02690 ABC transport system, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CCASEI_02685 HMP/thiamine permease K16925 ykoE; energy-coupling factor transport system permease protein D CCASEI_12385 ABC transporter, solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CCASEI_12395 ABC transport system, permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CCASEI_12390 ABC transport system, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CCASEI_01500 ABC transport system, permease K09690 wzm; homopolymeric O-antigen transport system permease protein D CCASEI_01495 ABC transport system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CCASEI_04750 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D CCASEI_04755 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CCASEI_13635 Macrolide export ATP-binding/permease macB K09813 hrtB; hemin transport system permease protein D CCASEI_13630 antimicrobial peptide ABC transporter ATPase K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CCASEI_10435 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CCASEI_10440 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D CCASEI_12850 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CCASEI_06070 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CCASEI_07440 ABC transport system, permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CCASEI_03570 putative integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CCASEI_12745 ABC transport system, permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CCASEI_12750 ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_12845 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_13510 ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_06065 ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_07435 ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_03565 ABC transporter-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_10415 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CCASEI_12025 ABC transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein D CCASEI_05970 ABC transporter inner membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D CCASEI_11515 lipoprotein release ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CCASEI_02525 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CCASEI_12030 ABC transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CCASEI_11510 antimicrobial peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CCASEI_05965 ABC-type transport system, involved in lipoprotein release, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CCASEI_07410 ABC transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein D CCASEI_14020 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CCASEI_01550 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CCASEI_10560 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CCASEI_06195 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump D CCASEI_04125 major facilitator transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CCASEI_13780 hypothetical protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CCASEI_09925 permease of the major facilitator superfamily protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CCASEI_08695 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CCASEI_09775 major facilitator superfamily protein K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D CCASEI_12740 bicyclomycin, sulfonamide resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CCASEI_03375 hypothetical protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CCASEI_11655 hypothetical protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CCASEI_12325 major facilitator superfamily permease K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CCASEI_11795 major facilitator superfamily permease K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D CCASEI_12490 permease of the major facilitator superfamily protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CCASEI_13435 major facilitator superfamily permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CCASEI_12315 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D CCASEI_13545 metabolite transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CCASEI_06435 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CCASEI_06420 Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CCASEI_12430 PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CCASEI_02835 PTS system sucrose-specific transporter subunit IIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CCASEI_07925 PTS system glucose-specific transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CCASEI_06425 fructose specific PTS system component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CCASEI_04145 PTS system mannose-specific transporter subunits IIBCA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CCASEI_05140 putative phosphotransferase system protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CCASEI_05145 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CCASEI_10635 transport protein of the voltage-gated ion channel superfamily K10716 kch; voltage-gated potassium channel D CCASEI_05905 hypothetical protein K03320 amt; ammonium transporter, Amt family D CCASEI_02510 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CCASEI_07760 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CCASEI_12070 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D CCASEI_10030 transport protein of the large conductance mechanosensitive ion channel family K03282 mscL; large conductance mechanosensitive channel D CCASEI_05020 small conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D CCASEI_11105 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D CCASEI_01545 Mg/Co/Ni transporter K06213 mgtE; magnesium transporter D CCASEI_07105 transporter of the CorA metal ion transporter family protein K03284 corA; magnesium transporter D CCASEI_12015 ccrB; camphor resistance protein CrcB K06199 crcB; fluoride exporter D CCASEI_12020 hypothetical protein K06199 crcB; fluoride exporter D CCASEI_04500 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CCASEI_04505 transporter of the HlyC/CorC family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CCASEI_00105 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D CCASEI_09055 aromatic amino acid transport protein K16237 aroP; aromatic amino acid permease D CCASEI_05255 Co/Zn/Cd efflux system transmembrane protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D CCASEI_09125 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CCASEI_13090 drug exporter of the RND superfamily protein K20470 mmpL3; trehalose monomycolate/heme transporter D CCASEI_02360 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D CCASEI_03160 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D CCASEI_05575 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D CCASEI_05640 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D CCASEI_03810 permease K05786 rarD; chloramphenicol-sensitive protein RarD D CCASEI_10140 hypothetical protein K07084 yuiF; putative amino acid transporter D CCASEI_04265 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CCASEI_08115 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CCASEI_08790 L-lactate permease K03303 lutP; lactate permease D CCASEI_03555 high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein D CCASEI_00625 Ca2+/H+ antiporter K07300 chaA; Ca2+:H+ antiporter D CCASEI_08850 sodium/proline symporter family protein K11928 putP; sodium/proline symporter D CCASEI_10245 cation/acetate symporter K14393 actP; cation/acetate symporter D CCASEI_12885 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CCASEI_01155 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D CCASEI_01740 NhaP-type Na+/H+ and K+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D CCASEI_04665 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D CCASEI_04670 K(+)-uptake system protein K03499 trkA; trk/ktr system potassium uptake protein D CCASEI_04945 K(+)-uptake system protein K03499 trkA; trk/ktr system potassium uptake protein D CCASEI_00490 cytosine permease K10974 codB; cytosine permease D CCASEI_10290 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D CCASEI_04045 sodium-coupled neutral amino acid transporter 10 K03834 tyrP; tyrosine-specific transport protein D CCASEI_04150 Threonine/serine transporter K03837 sdaC; serine transporter D CCASEI_06985 Threonine/serine transporter K03837 sdaC; serine transporter D CCASEI_08185 putative benzoate transporter protein K05782 benE; benzoate membrane transport protein D CCASEI_00165 chromate transporter K07240 chrA; chromate transporter D CCASEI_09315 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D CCASEI_09415 hypothetical protein K03321 TC.SULP; sulfate permease, SulP family D CCASEI_03750 TRAP dicarboxylate transporter subunit DctQ K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D CCASEI_03755 TRAP C4-dicarboxylate transport system permease DctM K21393 yiaN; TRAP-type transport system large permease protein D CCASEI_03760 TRAP dicarboxylate family transporter subunit DctP K21395 yiaO; TRAP-type transport system periplasmic protein D CCASEI_12545 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CCASEI_04015 hypothetical protein K03893 arsB; arsenical pump membrane protein D CCASEI_09345 arsenical-resistance protein K03325 ACR3; arsenite transporter D CCASEI_09210 putative arsenite efflux pump K03325 ACR3; arsenite transporter D CCASEI_12670 monovalent cation/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CCASEI_05875 monovalent cation/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CCASEI_12675 monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CCASEI_05880 monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CCASEI_12680 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CCASEI_05885 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CCASEI_12685 monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CCASEI_05890 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CCASEI_12690 monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CCASEI_12695 monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CCASEI_05900 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CCASEI_14065 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D CCASEI_02420 hypothetical protein K13936 mdcF; malonate transporter and related proteins D CCASEI_08395 lysine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D CCASEI_01120 Threonine efflux protein K05835 rhtC; threonine efflux protein D CCASEI_04330 arginine exporter K05835 rhtC; threonine efflux protein D CCASEI_14030 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D CCASEI_04245 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D CCASEI_04240 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CCASEI_04235 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D CCASEI_09505 transporter of the permease K20469 K20469; putative heme transporter D CCASEI_01750 hypothetical protein K09125 yhhQ; queuosine precursor transporter D CCASEI_04650 Fe 2+/Mn2+ transporter pcl1 K22736 VIT; vacuolar iron transporter family protein D CCASEI_05505 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CCASEI_02385 cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D CCASEI_08700 narZ; nitrate reductase Z subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08705 narY; nitrate reductase Z subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_08715 Nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CCASEI_13095 hypothetical protein K20468 K20468; putative heme transporter D CCASEI_06690 copper resistance protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:ccg02044] D CCASEI_06905 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CCASEI_01940 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CCASEI_01945 hypothetical protein K12510 tadB; tight adherence protein B D CCASEI_05545 hypothetical protein K02221 yggT; YggT family protein D CCASEI_04305 hypothetical protein K02237 comEA; competence protein ComEA D CCASEI_04310 hypothetical protein K02238 comEC; competence protein ComEC D CCASEI_11825 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D CCASEI_03015 Ftsk domain-containing protein K27086 eccC; ESX secretion system protein EccC D CCASEI_03010 hypothetical protein K27087 eccD; ESX secretion system protein EccD D CCASEI_03000 serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CCASEI_03025 hypothetical protein K14956 esx; ESAT-6 family protein D CCASEI_03030 hypothetical protein K14956 esx; ESAT-6 family protein D CCASEI_07015 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_10735 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CCASEI_06780 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CCASEI_02590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CCASEI_06785 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CCASEI_07490 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CCASEI_02925 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CCASEI_05920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CCASEI_05870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CCASEI_06775 preprotein translocase subunit YajC-like protein K03210 yajC; preprotein translocase subunit YajC D CCASEI_13475 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_14135 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CCASEI_08980 Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB D CCASEI_07195 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ccg02042] D CCASEI_04500 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CCASEI_04505 transporter of the HlyC/CorC family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CCASEI_12210 transporter of the Hly III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ccg02022] D CCASEI_02255 sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CCASEI_02260 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CCASEI_10755 two-component system sensor kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CCASEI_10760 sensor kinase K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CCASEI_12300 two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CCASEI_12305 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D CCASEI_12855 two-component sensory kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D CCASEI_12860 hypothetical protein K07693 desR; two-component system, NarL family, response regulator DesR D CCASEI_02580 two-component system sensor kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:ccg02035] D CCASEI_06905 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CCASEI_01940 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ccg04812] D CCASEI_05525 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CCASEI_07675 partitioning protein K03496 parA; chromosome partitioning protein D CCASEI_14125 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D CCASEI_14308 hypothetical protein K03496 parA; chromosome partitioning protein D CCASEI_14120 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CCASEI_11695 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ccg04147] D CCASEI_09675 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CCASEI_09765 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCASEI_07505 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CCASEI_07500 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CCASEI_05785 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CCASEI_00760 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CCASEI_12655 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CCASEI_12955 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CCASEI_10145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CCASEI_03150 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CCASEI_03155 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CCASEI_02720 elongation factor Tu K02358 tuf; elongation factor Tu D CCASEI_13390 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CCASEI_14020 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CCASEI_04455 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02225 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02230 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_02235 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CCASEI_04155 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_13800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CCASEI_02930 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CCASEI_06795 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CCASEI_07790 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CCASEI_07795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CCASEI_05190 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CCASEI_08575 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CCASEI_13240 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CCASEI_04880 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_04915 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05210 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_05270 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CCASEI_02330 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CCASEI_08335 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CCASEI_10105 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CCASEI_02080 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CCASEI_08545 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CCASEI_07475 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CCASEI_07495 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CCASEI_02250 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CCASEI_11230 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ccg02048] D CCASEI_04575 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 D CCASEI_04580 CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2 D CCASEI_04545 CRISPR-associated protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CCASEI_04940 CRISPR-associated helicase Cas3, Anaes-subtype K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CCASEI_04550 CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA D CCASEI_04555 CRISPR-associated protein K19046 casB; CRISPR system Cascade subunit CasB D CCASEI_04560 CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC D CCASEI_04565 CRISPR-associated protein K19125 casD; CRISPR system Cascade subunit CasD D CCASEI_04925 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE D CCASEI_04570 CRISPR-associated protein K19126 casE; CRISPR system Cascade subunit CasE D CCASEI_04930 hypothetical protein K19131 csb1; CRISPR-associated protein Csb1 D CCASEI_08230 DNA restriction-modification system, restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CCASEI_08235 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CCASEI_08240 DNA restriction-modification system, DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CCASEI_04340 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CCASEI_11370 DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CCASEI_13105 type III restriction-modification system restriction subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D CCASEI_09495 restriction-modification system: methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CCASEI_13120 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CCASEI_13115 DNA methylase N-4/N-6 K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CCASEI_06980 adenine-specific DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CCASEI_09365 McrBC restriction endonuclease system protein McrB K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D CCASEI_09370 5-methylcytosine-specific restriction enzyme subunit McrC K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D CCASEI_08820 Phage shock protein C K03973 pspC; phage shock protein C D CCASEI_12935 stress-responsive transcriptional regulator K03973 pspC; phage shock protein C D CCASEI_10485 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D CCASEI_10490 XRE family plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CCASEI_09205 addiction module antidote protein HigA K21498 higA-1; antitoxin HigA-1 D CCASEI_05525 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CCASEI_01745 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08275 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CCASEI_08540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ccg04090] C 01504 Antimicrobial resistance genes [BR:ccg01504] D CCASEI_01155 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D CCASEI_00115 ABC transporter permease K18230 tylC; macrolide transport system ATP-binding/permease protein D CCASEI_12325 major facilitator superfamily permease K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ccg00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ccg03100] D CCASEI_t14159 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCASEI_t14161 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCASEI_t14243 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CCASEI_t14169 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14217 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14235 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CCASEI_t14187 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CCASEI_t14247 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCASEI_t14249 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CCASEI_t14199 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CCASEI_t14223 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCASEI_t14215 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CCASEI_t14251 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCASEI_t14213 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCASEI_t14211 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CCASEI_t14193 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14203 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14197 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14233 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14257 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CCASEI_t14237 tRNA-His K14226 tRNA-His; tRNA His D CCASEI_t14157 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CCASEI_t14207 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14221 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14241 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14209 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14163 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CCASEI_t14239 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCASEI_t14253 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CCASEI_t14229 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14227 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14189 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14183 tRNA-Met K14230 tRNA-Met; tRNA Met D CCASEI_t14245 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CCASEI_t14205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCASEI_t14231 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCASEI_t14175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CCASEI_t14165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14167 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14171 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14173 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CCASEI_t14255 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCASEI_t14181 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCASEI_t14177 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CCASEI_t14185 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CCASEI_t14179 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CCASEI_t14191 tRNA-Val K14237 tRNA-Val; tRNA Val D CCASEI_t14195 tRNA-Val K14237 tRNA-Val; tRNA Val D CCASEI_t14201 tRNA-Val K14237 tRNA-Val; tRNA Val D CCASEI_t14219 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CCASEI_r14271 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14273 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14267 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CCASEI_r14277 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14281 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14279 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CCASEI_r14259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14263 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CCASEI_r14265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CCASEI_02040 nitrosothiol reductase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D CCASEI_01390 short chain dehydrogenase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D CCASEI_11070 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CCASEI_10255 oxidoreductase, aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CCASEI_01395 FAD/FMN-containing dehydrogenase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CCASEI_02565 monooxygenase, FAD-binding protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D CCASEI_04625 dinucleotide-binding protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D CCASEI_03455 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CCASEI_07455 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CCASEI_06120 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D CCASEI_13400 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CCASEI_06665 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CCASEI_08385 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CCASEI_06705 iron-dependent peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D CCASEI_11340 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CCASEI_06830 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CCASEI_06475 alkyl hydroperoxide reductase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CCASEI_00655 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CCASEI_05040 hypothetical protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CCASEI_05305 hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D CCASEI_01010 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CCASEI_12785 Ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CCASEI_10885 glutaredoxin-related protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CCASEI_10215 hypothetical protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D CCASEI_07120 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CCASEI_01070 O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CCASEI_12155 MshD acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D CCASEI_07160 polyprenol-phosphate-mannose synthase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CCASEI_13050 hypothetical protein K27307 tmaT; acetyltransferase [EC:2.3.1.-] D CCASEI_10300 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D CCASEI_02245 MshA glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CCASEI_05780 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CCASEI_08005 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CCASEI_05215 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CCASEI_11570 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CCASEI_09340 arsenate reductase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D CCASEI_02415 putative microcin esterase K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109] D CCASEI_08935 type B carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CCASEI_04435 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CCASEI_13165 carbohydrate esterase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D CCASEI_11135 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CCASEI_04295 phosphoglycerate mutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D CCASEI_09920 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CCASEI_08600 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D CCASEI_09195 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D CCASEI_12720 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CCASEI_07570 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CCASEI_09090 MshB deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D CCASEI_09620 mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D CCASEI_12915 hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CCASEI_13620 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CCASEI_07275 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D CCASEI_13150 acyl-CoA carboxylase subunit beta K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] D CCASEI_00560 cation-transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CCASEI_14015 cation transport ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D CCASEI_04190 acetoin utilization protein K04768 acuC; acetoin utilization protein AcuC D CCASEI_08795 CoB--CoM heterodisulfide reductase subunit B K18928 lldE; L-lactate dehydrogenase complex protein LldE D CCASEI_08800 hypothetical protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D CCASEI_08805 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D CCASEI_02885 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D CCASEI_07400 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins D CCASEI_08550 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D CCASEI_09150 hypothetical protein K04015 nrfD; protein NrfD D CCASEI_01765 hypothetical protein K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D CCASEI_11210 mycolate reductase A K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D CCASEI_01350 ribonucleotide reduction protein K03647 nrdI; protein involved in ribonucleotide reduction D CCASEI_11890 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CCASEI_05535 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CCASEI_10325 resuscitation-promoting factor RpfA K21687 rpfA; resuscitation-promoting factor RpfA D CCASEI_09915 resuscitation-promoting factor RpfB K21688 rpfB; resuscitation-promoting factor RpfB C 99987 Cofactor metabolism D CCASEI_10390 AbgT transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D CCASEI_06975 hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase D CCASEI_12400 feruloyl esterase B K03932 lpqC; polyhydroxybutyrate depolymerase D CCASEI_05060 putative polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase D CCASEI_01360 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CCASEI_02490 DoxX family protein K15977 K15977; putative oxidoreductase D CCASEI_09990 hypothetical protein K15977 K15977; putative oxidoreductase D CCASEI_08380 hypothetical protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CCASEI_01975 cold shock protein A K03704 cspA; cold shock protein D CCASEI_10320 cold shock protein K03704 cspA; cold shock protein D CCASEI_05955 transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CCASEI_08155 hypothetical protein K03668 hslJ; heat shock protein HslJ D CCASEI_11430 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CCASEI_11040 tig; trigger factor K03545 tig; trigger factor D CCASEI_10430 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D CCASEI_11895 Glutaredoxin-like protein nrdH K06191 nrdH; glutaredoxin-like protein NrdH D CCASEI_06010 hypothetical protein K07391 comM; magnesium chelatase family protein D CCASEI_02390 membrane protein required for cytochrome c biosynthesis K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D CCASEI_01130 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D CCASEI_09510 DNA recombination protein K09760 rmuC; DNA recombination protein RmuC D CCASEI_03940 Yga2G K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CCASEI_08220 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CCASEI_06005 hypothetical protein K07460 yraN; putative endonuclease D CCASEI_07240 RecB family exonuclease K07465 K07465; putative RecB family exonuclease D CCASEI_06015 DNA processing protein K04096 smf; DNA processing protein D CCASEI_06880 recombination factor protein RarA K07478 ycaJ; putative ATPase D CCASEI_00480 TnpB protein K18320 IS15; transposase, IS6 family D CCASEI_00965 hypothetical protein K18320 IS15; transposase, IS6 family D CCASEI_14368 transposase for insertion sequence element K18320 IS15; transposase, IS6 family D CCASEI_00270 transposase A K07483 K07483; transposase D CCASEI_01800 hypothetical protein K07483 K07483; transposase D CCASEI_03910 hypothetical protein K07483 K07483; transposase D CCASEI_02655 hypothetical protein K07483 K07483; transposase D CCASEI_02820 hypothetical protein K07483 K07483; transposase D CCASEI_00455 hypothetical protein K07483 K07483; transposase D CCASEI_00515 hypothetical protein K07483 K07483; transposase D CCASEI_04805 hypothetical protein K07483 K07483; transposase D CCASEI_00935 hypothetical protein K07483 K07483; transposase D CCASEI_01625 hypothetical protein K07483 K07483; transposase D CCASEI_00500 transposase IS3/IS911 family protein K07483 K07483; transposase D CCASEI_11585 Insertion element IS6110 protein K07483 K07483; transposase D CCASEI_14000 transposase K07485 K07485; transposase D CCASEI_01310 transposase K07485 K07485; transposase D CCASEI_03955 transposase K07486 K07486; transposase D CCASEI_04770 transposase-like protein K07486 K07486; transposase D CCASEI_04850 transposase K07486 K07486; transposase D CCASEI_01245 transposase K07486 K07486; transposase D CCASEI_01320 transposase K07486 K07486; transposase D CCASEI_11310 transposase K07486 K07486; transposase D CCASEI_11580 putative transposase K07486 K07486; transposase D CCASEI_03960 putative transposase K07493 K07493; putative transposase D CCASEI_00045 putative transposase K07493 K07493; putative transposase D CCASEI_04765 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_04790 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_00450 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_00505 putative transposase K07493 K07493; putative transposase D CCASEI_04840 putative transposase K07493 K07493; putative transposase D CCASEI_04845 putative transposase K07493 K07493; putative transposase D CCASEI_05045 transposase for insertion sequence element K07493 K07493; putative transposase D CCASEI_09350 putative transposase K07493 K07493; putative transposase D CCASEI_00880 putative transposase K07493 K07493; putative transposase D CCASEI_01225 transposase K07493 K07493; putative transposase D CCASEI_01235 putative transposase K07493 K07493; putative transposase D CCASEI_01240 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_01305 transposase K07493 K07493; putative transposase D CCASEI_01315 putative transposase K07493 K07493; putative transposase D CCASEI_01635 putative transposase K07493 K07493; putative transposase D CCASEI_11050 putative transposase K07493 K07493; putative transposase D CCASEI_11055 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_02645 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_02660 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_11260 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_11300 putative transposase K07493 K07493; putative transposase D CCASEI_11305 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_11565 Transposase, Mutator family protein K07493 K07493; putative transposase D CCASEI_03930 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_08110 transposase for insertion sequence K07493 K07493; putative transposase D CCASEI_04585 transposase IS3/IS911 family protein K07497 K07497; putative transposase D CCASEI_00525 Integrase catalytic region K07497 K07497; putative transposase D CCASEI_04970 transposase IS3/IS911 family protein K07497 K07497; putative transposase D CCASEI_03855 transposase IS3/IS911 family protein K07497 K07497; putative transposase D CCASEI_00275 transposase K07497 K07497; putative transposase D CCASEI_04590 transposase-like protein K07497 K07497; putative transposase D CCASEI_04965 transposase-like protein K07497 K07497; putative transposase D CCASEI_01465 transposase K07497 K07497; putative transposase D CCASEI_11560 integrase catalytic subunit K07497 K07497; putative transposase D CCASEI_11790 integrase catalytic subunit K07497 K07497; putative transposase D CCASEI_03860 transposase-like protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CCASEI_06300 hypothetical protein K03969 pspA; phage shock protein A D CCASEI_01715 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CCASEI_01810 putative transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CCASEI_02575 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CCASEI_11025 tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CCASEI_04065 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D CCASEI_01100 sodium:proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CCASEI_04080 hypothetical protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CCASEI_11215 hypothetical protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CCASEI_05855 transport protein of the alanine or glycine:cation symporter family K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CCASEI_09260 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CCASEI_04405 branched-chain amino acid uptake carrier K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CCASEI_08425 Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CCASEI_03670 hypothetical protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CCASEI_00680 di- and tricarboxylate transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D CCASEI_00475 transporter K07085 K07085; putative transport protein C 99978 Cell growth D CCASEI_09465 putative DNA recombinase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D CCASEI_12535 carbon starvation protein CstA K06200 cstA; carbon starvation protein D CCASEI_09100 GTP-binding protein K06207 typA; GTP-binding protein D CCASEI_07355 hypothetical protein K07166 K07166; ACT domain-containing protein D CCASEI_04530 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CCASEI_09575 phosphate starvation-inducible protein K07175 phoH2; PhoH-like ATPase D CCASEI_08310 signal transduction protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D CCASEI_08535 hypothetical protein K07273 acm; lysozyme D CCASEI_05960 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D CCASEI_12130 phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein D CCASEI_06275 hypothetical protein K05794 terC; tellurite resistance protein TerC D CCASEI_05790 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D CCASEI_13655 oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D CCASEI_08160 putative acyltransferase K02348 elaA; ElaA protein D CCASEI_01970 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D CCASEI_11110 hemoglobin-like protein K06886 glbN; hemoglobin D CCASEI_04135 MMPL domain-containing protein K06994 K06994; putative drug exporter of the RND superfamily D CCASEI_09835 RND superfamily drug exporter K06994 K06994; putative drug exporter of the RND superfamily D CCASEI_01775 RND superfamily drug exporter K06994 K06994; putative drug exporter of the RND superfamily D CCASEI_00755 phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D CCASEI_01020 phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D CCASEI_07420 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D CCASEI_07415 ABC transporter K09015 sufD; Fe-S cluster assembly protein SufD D CCASEI_03395 hypothetical protein K07058 K07058; membrane protein D CCASEI_07165 fxsA; phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D CCASEI_13460 hypothetical protein K07146 K07146; UPF0176 protein D CCASEI_13605 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D CCASEI_14085 hypothetical protein K04750 phnB; PhnB protein D CCASEI_01990 hypothetical protein K03975 dedA; membrane-associated protein D CCASEI_13885 hypothetical protein K01421 yhgE; putative membrane protein D CCASEI_13890 phage infection protein K01421 yhgE; putative membrane protein D CCASEI_01645 hypothetical protein K01421 yhgE; putative membrane protein D CCASEI_04270 hypothetical protein K00389 yidH; putative membrane protein D CCASEI_01540 hypothetical protein K08972 K08972; putative membrane protein D CCASEI_07965 hypothetical protein K08974 K08974; putative membrane protein D CCASEI_03290 membrane protein K08981 K08981; putative membrane protein D CCASEI_02640 hypothetical protein K08987 K08987; putative membrane protein D CCASEI_07005 hypothetical protein K09858 K09858; SEC-C motif domain protein D CCASEI_09235 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D CCASEI_13085 hypothetical protein K06860 K06860; putative heme uptake system protein D CCASEI_04325 hypothetical protein K06867 K06867; uncharacterized protein D CCASEI_04460 hypothetical protein K06867 K06867; uncharacterized protein D CCASEI_03805 hypothetical protein K06867 K06867; uncharacterized protein D CCASEI_12060 hypothetical protein K06975 K06975; uncharacterized protein D CCASEI_12065 hypothetical protein K06975 K06975; uncharacterized protein D CCASEI_12270 hypothetical protein K06986 K06986; uncharacterized protein D CCASEI_09295 glyoxalase K06996 K06996; uncharacterized protein D CCASEI_01140 hypothetical protein K06996 K06996; uncharacterized protein D CCASEI_12260 extracellular nuclease K07004 K07004; uncharacterized protein D CCASEI_09435 hypothetical protein K07032 K07032; uncharacterized protein D CCASEI_06865 hypothetical protein K07054 K07054; uncharacterized protein D CCASEI_07635 hypothetical protein K07071 K07071; uncharacterized protein D CCASEI_10795 hypothetical protein K07090 K07090; uncharacterized protein D CCASEI_10860 hypothetical protein K07090 K07090; uncharacterized protein D CCASEI_01055 permease K07090 K07090; uncharacterized protein D CCASEI_07985 hypothetical protein K07090 K07090; uncharacterized protein D CCASEI_12520 hypothetical protein K07093 K07093; uncharacterized protein D CCASEI_01835 phosphohydrolase K07098 K07098; uncharacterized protein D CCASEI_04220 hypothetical protein K07120 K07120; uncharacterized protein D CCASEI_01050 hypothetical protein K07120 K07120; uncharacterized protein D CCASEI_05165 hypothetical protein K07164 K07164; uncharacterized protein D CCASEI_14140 preprotein translocase subunit K08998 K08998; uncharacterized protein D CCASEI_07030 hypothetical protein K08999 K08999; uncharacterized protein D CCASEI_09660 hypothetical protein K09009 K09009; uncharacterized protein D CCASEI_01840 hypothetical protein K09117 K09117; uncharacterized protein D CCASEI_10590 hypothetical protein K09118 K09118; uncharacterized protein D CCASEI_09115 hypothetical protein K09146 K09146; uncharacterized protein D CCASEI_07360 hypothetical protein K09157 K09157; uncharacterized protein D CCASEI_03285 hypothetical protein K09167 K09167; uncharacterized protein D CCASEI_06280 hypothetical protein K09780 K09780; uncharacterized protein D CCASEI_09120 hypothetical protein K09781 K09781; uncharacterized protein D CCASEI_07750 hypothetical protein K09791 K09791; uncharacterized protein D CCASEI_06150 hypothetical protein K09861 K09861; uncharacterized protein D CCASEI_06175 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024