+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium choanae
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ccho00010]
D CCHOA_07165 bglK; Beta-glucoside kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_07880 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_04535 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_03250 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CCHOA_04790 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CCHOA_03845 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CCHOA_01120 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_04500 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_06190 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CCHOA_03630 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_06200 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_06195 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CCHOA_10580 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CCHOA_03695 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CCHOA_02975 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CCHOA_08145 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CCHOA_07990 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_00445 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CCHOA_03100 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_06700 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CCHOA_11685 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CCHOA_01400 bglH; Aryl-phospho-beta-D-glucosidase BglH K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CCHOA_06795 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:ccho00020]
D CCHOA_03110 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CCHOA_06030 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CCHOA_09145 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CCHOA_04315 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_02030 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CCHOA_10710 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CCHOA_10705 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CCHOA_10715 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CCHOA_03840 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CCHOA_07225 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CCHOA_11685 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CCHOA_08145 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CCHOA_07990 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ccho00030]
D CCHOA_03250 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CCHOA_06140 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CCHOA_06150 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CCHOA_05570 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CCHOA_06235 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CCHOA_06125 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CCHOA_06130 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CCHOA_08765 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CCHOA_01180 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CCHOA_07555 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_03650 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CCHOA_02280 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CCHOA_01120 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_04500 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_03845 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CCHOA_04790 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:ccho00040]
D CCHOA_04120 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CCHOA_03385 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CCHOA_04090 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CCHOA_06235 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ccho00051]
D CCHOA_09940 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CCHOA_02470 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CCHOA_01185 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CCHOA_02455 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CCHOA_02435 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CCHOA_04790 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CCHOA_03845 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CCHOA_06870 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CCHOA_01120 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_04500 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_06190 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CCHOA_08765 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ccho00052]
D CCHOA_03100 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CCHOA_07070 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CCHOA_08080 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CCHOA_07075 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CCHOA_03515 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CCHOA_06765 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CCHOA_03385 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_07165 bglK; Beta-glucoside kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_07880 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_04535 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_00815 bgaB; Beta-galactosidase bgaB K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D CCHOA_00520 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CCHOA_04790 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CCHOA_04245 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CCHOA_09955 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:ccho00053]
D CCHOA_04120 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CCHOA_04090 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:ccho00500]
D CCHOA_09950 bglF4; PTS system beta-glucoside-specific EIIBCA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CCHOA_04245 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CCHOA_09955 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CCHOA_03385 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CCHOA_01400 bglH; Aryl-phospho-beta-D-glucosidase BglH K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CCHOA_04260 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CCHOA_01570 glgB1; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CCHOA_04700 glgB2; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CCHOA_03230 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CCHOA_08430 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CCHOA_03530 nplT; Neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CCHOA_08410 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CCHOA_08435 mak1; Maltokinase K16146 pep2; maltokinase [EC:2.7.1.175]
D CCHOA_04705 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CCHOA_04255 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CCHOA_06795 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CCHOA_02870 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D CCHOA_02845 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CCHOA_02820 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D CCHOA_01740 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CCHOA_01730 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CCHOA_01855 treA; Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_07165 bglK; Beta-glucoside kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_07880 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_04535 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_03250 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CCHOA_09940 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ccho00520]
D CCHOA_00900 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CCHOA_06795 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CCHOA_04495 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CCHOA_07160 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CCHOA_09940 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CCHOA_09405 glmS2; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CCHOA_00515 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CCHOA_03655 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CCHOA_02150 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CCHOA_10595 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CCHOA_11340 nanE; Putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CCHOA_04115 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CCHOA_04150 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CCHOA_07165 bglK; Beta-glucoside kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_07880 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_04535 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_06700 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_03385 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CCHOA_04120 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CCHOA_07070 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CCHOA_08080 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CCHOA_07075 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CCHOA_03515 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CCHOA_06765 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CCHOA_00520 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CCHOA_03250 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CCHOA_02470 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CCHOA_01185 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CCHOA_02455 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CCHOA_02435 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CCHOA_04260 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ccho00620]
D CCHOA_08145 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CCHOA_07990 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_05620 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CCHOA_01235 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CCHOA_01230 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CCHOA_02975 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CCHOA_02305 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CCHOA_07525 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CCHOA_02030 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CCHOA_00445 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CCHOA_01770 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CCHOA_05685 glycolate oxidase subunit GlcD K18930 dld; D-lactate dehydrogenase
D CCHOA_06445 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CCHOA_03120 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CCHOA_07225 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CCHOA_03840 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CCHOA_06185 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CCHOA_11685 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CCHOA_11110 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ccho00630]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CCHOA_03110 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CCHOA_06030 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CCHOA_04640 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CCHOA_02305 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CCHOA_02345 accD2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CCHOA_02350 accD3; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CCHOA_02340 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CCHOA_05950 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_05955 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_11060 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CCHOA_08110 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CCHOA_08035 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_08060 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_03780 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_07605 Glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CCHOA_09560 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CCHOA_04315 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CCHOA_10630 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:ccho00640]
D CCHOA_01235 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CCHOA_01230 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_05620 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CCHOA_03615 acuI; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CCHOA_02305 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CCHOA_02710 Methylmalonyl-CoA carboxyltransferase 5S subunit K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D CCHOA_02715 Methylmalonyl-CoA carboxyltransferase 12S subunit K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D CCHOA_02720 Methylmalonyl-CoA carboxyltransferase 12S subunit K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D CCHOA_02725 Methylmalonyl-CoA carboxyltransferase 1.3S subunit K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D CCHOA_02345 accD2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CCHOA_02350 accD3; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CCHOA_02340 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CCHOA_04640 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CCHOA_05950 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_05955 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_00445 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:ccho00650]
D CCHOA_10710 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CCHOA_10705 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CCHOA_10715 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CCHOA_00075 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_03260 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_02030 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CCHOA_05620 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CCHOA_04870 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CCHOA_04875 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CCHOA_04250 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:ccho00660]
D CCHOA_04870 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CCHOA_04875 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CCHOA_04250 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CCHOA_04985 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CCHOA_04990 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CCHOA_04920 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ccho00562]
D CCHOA_06695 suhB2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CCHOA_06565 pgsA1; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D CCHOA_06190 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ccho00190]
D CCHOA_05630 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CCHOA_10710 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CCHOA_10705 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CCHOA_10715 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CCHOA_07910 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CCHOA_07905 petB; Cytochrome b6 K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CCHOA_07915 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D CCHOA_06120 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CCHOA_07925 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CCHOA_07920 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CCHOA_09025 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CCHOA_07930 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CCHOA_06110 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CCHOA_04605 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CCHOA_04615 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CCHOA_04610 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CCHOA_04590 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CCHOA_04620 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CCHOA_04575 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CCHOA_04585 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CCHOA_04580 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CCHOA_08790 hypothetical protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CCHOA_01560 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CCHOA_01535 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CCHOA_03605 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ccho00710]
D CCHOA_06195 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CCHOA_03630 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_06200 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_01120 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_04500 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_03845 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CCHOA_06125 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CCHOA_08765 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CCHOA_06190 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CCHOA_06235 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CCHOA_06130 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CCHOA_06185 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ccho00720]
D CCHOA_06185 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CCHOA_03840 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CCHOA_10710 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CCHOA_10705 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CCHOA_10715 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CCHOA_09145 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CCHOA_06030 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CCHOA_04640 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CCHOA_05950 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_05955 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_09200 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CCHOA_03830 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CCHOA_01230 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CCHOA_01235 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:ccho00680]
D CCHOA_03780 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CCHOA_03695 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CCHOA_06185 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CCHOA_01120 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_04500 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CCHOA_03845 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CCHOA_04790 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CCHOA_01235 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CCHOA_01230 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CCHOA_10580 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CCHOA_04905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CCHOA_03090 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CCHOA_09020 serB1; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ccho00910]
D CCHOA_05120 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CCHOA_05130 narT; putative nitrate transporter NarT K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CCHOA_05115 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05110 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05100 narX1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_07600 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CCHOA_08035 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_08060 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_01665 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ccho00920]
D CCHOA_02675 ssuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CCHOA_03205 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CCHOA_07125 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CCHOA_01080 sseA1; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_02315 sseA2; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_05470 sseA3; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_02105 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CCHOA_02110 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CCHOA_09185 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ccho00061]
D CCHOA_02305 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CCHOA_08165 acpA; Acyl carrier protein K02078 acpP; acyl carrier protein
D CCHOA_10625 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CCHOA_08405 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_10590 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D CCHOA_08405 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_10590 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:ccho00121]
D CCHOA_10235 cbh; Choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ccho00561]
D CCHOA_07605 Glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CCHOA_09560 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CCHOA_02290 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CCHOA_05400 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CCHOA_07875 plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CCHOA_08525 dagK2; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CCHOA_08540 dagK3; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CCHOA_08545 dagK4; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CCHOA_00080 fbpC1; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CCHOA_00600 fbpC2; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CCHOA_01840 estB; Extracellular esterase EstB precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:ccho00564]
D CCHOA_05005 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CCHOA_07875 plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CCHOA_08525 dagK2; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CCHOA_08540 dagK3; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CCHOA_08545 dagK4; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CCHOA_00450 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CCHOA_11665 cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CCHOA_07335 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CCHOA_07005 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CCHOA_01320 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ccho00600]
D CCHOA_05190 nanA; Sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CCHOA_06535 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ccho00230]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_03650 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CCHOA_01955 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CCHOA_01850 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CCHOA_03290 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CCHOA_01145 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CCHOA_01915 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CCHOA_01905 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CCHOA_01910 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CCHOA_01960 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CCHOA_02370 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CCHOA_02375 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CCHOA_01895 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CCHOA_01875 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CCHOA_03300 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CCHOA_06480 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CCHOA_10225 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CCHOA_07760 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CCHOA_01595 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CCHOA_09290 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CCHOA_09295 guaB3; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CCHOA_08645 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CCHOA_08920 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CCHOA_06040 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CCHOA_09280 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CCHOA_07640 guaB2; Inosine-5'-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D CCHOA_06270 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CCHOA_02270 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CCHOA_09035 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CCHOA_08300 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CCHOA_06470 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CCHOA_03710 gppA1; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CCHOA_10550 gppA2; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CCHOA_10820 cyaB; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CCHOA_01135 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CCHOA_09080 Aminodeoxyfutalosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CCHOA_00070 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CCHOA_09545 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CCHOA_06570 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:ccho00240]
D CCHOA_06290 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CCHOA_06295 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CCHOA_06305 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CCHOA_06300 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CCHOA_05905 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CCHOA_01090 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CCHOA_06285 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CCHOA_07345 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CCHOA_08645 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CCHOA_02335 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CCHOA_09055 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CCHOA_06310 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CCHOA_01170 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CCHOA_00945 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CCHOA_02270 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CCHOA_09035 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CCHOA_02480 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CCHOA_06680 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CCHOA_01175 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D CCHOA_03200 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CCHOA_07050 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ccho00250]
D CCHOA_07685 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CCHOA_07940 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CCHOA_00970 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CCHOA_07030 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CCHOA_05870 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CCHOA_05345 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CCHOA_05350 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CCHOA_01135 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CCHOA_01875 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CCHOA_06305 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CCHOA_00075 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_03260 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_07600 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CCHOA_01000 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CCHOA_08035 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_08060 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_06290 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CCHOA_06295 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CCHOA_01910 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CCHOA_09405 glmS2; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CCHOA_01955 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ccho00260]
D CCHOA_11080 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CCHOA_11070 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CCHOA_04485 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CCHOA_04490 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CCHOA_05225 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CCHOA_03780 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CCHOA_07605 Glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CCHOA_09560 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CCHOA_10580 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CCHOA_04905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CCHOA_03090 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CCHOA_09020 serB1; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_08015 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CCHOA_07630 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CCHOA_11715 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CCHOA_11720 trpB2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CCHOA_04435 trpB1; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ccho00270]
D CCHOA_02105 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CCHOA_02110 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CCHOA_08460 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CCHOA_01425 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CCHOA_06255 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CCHOA_00980 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CCHOA_07760 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CCHOA_11425 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CCHOA_10635 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CCHOA_11080 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CCHOA_11070 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CCHOA_04485 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CCHOA_09185 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CCHOA_09175 metZ; O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CCHOA_07970 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CCHOA_01080 sseA1; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_02315 sseA2; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_05470 sseA3; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_00445 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CCHOA_08680 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CCHOA_08015 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CCHOA_04905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CCHOA_03090 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ccho00280]
D CCHOA_07970 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_02305 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CCHOA_02345 accD2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CCHOA_02350 accD3; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D CCHOA_02340 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D CCHOA_04640 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CCHOA_05950 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_05955 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ccho00290]
D CCHOA_07630 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CCHOA_04985 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CCHOA_04990 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CCHOA_04920 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CCHOA_04870 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CCHOA_04875 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CCHOA_04880 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CCHOA_04850 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CCHOA_07970 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CCHOA_00970 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CCHOA_11110 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ccho00300]
D CCHOA_04485 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CCHOA_11080 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CCHOA_11070 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CCHOA_07045 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CCHOA_11335 yagE; putative 2-keto-3-deoxy-galactonate aldolase YagE K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CCHOA_07055 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CCHOA_04100 dapD1; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CCHOA_04205 dapD2; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CCHOA_05325 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CCHOA_04210 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CCHOA_06930 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CCHOA_04475 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CCHOA_08915 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CCHOA_07805 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CCHOA_07800 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ccho00310]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_00075 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_03260 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:ccho00220]
D CCHOA_05330 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CCHOA_05345 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CCHOA_05350 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CCHOA_01910 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CCHOA_08035 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_08060 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_06290 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CCHOA_06295 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CCHOA_07600 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CCHOA_00970 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CCHOA_05315 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CCHOA_01340 mshD1; Mycothiol acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D CCHOA_05320 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CCHOA_05310 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CCHOA_05325 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ccho00330]
D CCHOA_10540 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CCHOA_01000 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CCHOA_08615 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CCHOA_08605 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CCHOA_08065 pip1; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:ccho00340]
D CCHOA_05875 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CCHOA_05880 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CCHOA_02945 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CCHOA_02930 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CCHOA_02925 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CCHOA_02940 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CCHOA_02910 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CCHOA_02905 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08105 cobD; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_11270 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_02740 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CCHOA_02900 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:ccho00350]
D CCHOA_02905 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08105 cobD; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_11270 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_00075 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_03260 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism
D CCHOA_02905 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08105 cobD; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_11270 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:ccho00380]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_11060 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ccho00400]
D CCHOA_07865 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CCHOA_06360 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CCHOA_11550 hypothetical protein K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CCHOA_06355 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CCHOA_06365 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CCHOA_02535 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CCHOA_06375 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CCHOA_11695 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CCHOA_11700 trpGD; Bifunctional protein TrpGD K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D CCHOA_02930 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CCHOA_02960 trpC1; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CCHOA_11705 trpC2; Tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D CCHOA_11715 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CCHOA_11720 trpB2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CCHOA_04435 trpB1; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CCHOA_03270 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D CCHOA_11245 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CCHOA_00475 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CCHOA_02905 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08105 cobD; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_11270 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D CCHOA_01520 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ccho00430]
D CCHOA_07030 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CCHOA_01230 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CCHOA_01235 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ccho00450]
D CCHOA_08460 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CCHOA_01425 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CCHOA_06070 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CCHOA_11795 trxB2; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CCHOA_03550 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ccho00460]
D CCHOA_07685 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CCHOA_03780 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ccho00470]
D CCHOA_09395 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CCHOA_05010 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CCHOA_01910 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CCHOA_08965 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CCHOA_07790 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CCHOA_06930 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CCHOA_04475 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CCHOA_08915 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ccho00480]
D CCHOA_01360 ybdK; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CCHOA_07975 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CCHOA_08775 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CCHOA_09145 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CCHOA_05570 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CCHOA_06140 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CCHOA_01900 hypothetical protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:ccho00515]
D CCHOA_03535 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:ccho00514]
D CCHOA_03535 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ccho00511]
D CCHOA_05190 nanA; Sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ccho00542]
D CCHOA_04565 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ccho00541]
D CCHOA_03385 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CCHOA_03515 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CCHOA_06765 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CCHOA_00520 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CCHOA_04120 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CCHOA_10420 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CCHOA_10430 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CCHOA_02470 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CCHOA_01185 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CCHOA_02455 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CCHOA_03655 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CCHOA_04115 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CCHOA_04150 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:ccho00550]
D CCHOA_02150 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CCHOA_10595 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CCHOA_07775 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CCHOA_07790 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CCHOA_07805 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CCHOA_05010 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CCHOA_07800 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CCHOA_08345 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CCHOA_05895 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CCHOA_07795 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CCHOA_07780 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CCHOA_07810 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CCHOA_00165 pbpA1; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CCHOA_09085 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CCHOA_01585 dac; D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CCHOA_11125 UDP-N-acetylmuramate--L-alanine ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CCHOA_11130 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:ccho00552]
D CCHOA_05895 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CCHOA_04565 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ccho00543]
D CCHOA_04565 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CCHOA_02105 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ccho00730]
D CCHOA_05595 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CCHOA_04740 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CCHOA_06665 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CCHOA_05605 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CCHOA_05600 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CCHOA_05020 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CCHOA_02530 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CCHOA_09545 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ccho00740]
D CCHOA_06230 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CCHOA_07100 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CCHOA_02675 ssuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CCHOA_05605 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:ccho00750]
D CCHOA_03090 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CCHOA_05225 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CCHOA_06540 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CCHOA_06530 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ccho00760]
D CCHOA_08990 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CCHOA_10225 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CCHOA_08595 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CCHOA_02620 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CCHOA_02245 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CCHOA_07000 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CCHOA_08890 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CCHOA_11505 cobB2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CCHOA_05415 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CCHOA_00075 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CCHOA_03260 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ccho00770]
D CCHOA_04870 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CCHOA_04875 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CCHOA_04880 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CCHOA_04850 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CCHOA_01520 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CCHOA_03775 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CCHOA_06260 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CCHOA_05050 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CCHOA_05205 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CCHOA_08900 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CCHOA_00185 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CCHOA_07970 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:ccho00780]
D CCHOA_05455 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CCHOA_05460 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CCHOA_02885 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CCHOA_02360 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ccho00785]
D CCHOA_08000 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CCHOA_08005 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_08145 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CCHOA_07990 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CCHOA_04315 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00790 Folate biosynthesis [PATH:ccho00790]
D CCHOA_01605 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CCHOA_01615 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CCHOA_01620 sulD; Bifunctional folate synthesis protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CCHOA_01610 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CCHOA_03195 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CCHOA_08670 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CCHOA_01820 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D CCHOA_01975 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CCHOA_05155 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CCHOA_05145 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CCHOA_03390 moeA1; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CCHOA_05150 moeA2; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:ccho00670]
D CCHOA_03195 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CCHOA_09200 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CCHOA_03780 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CCHOA_03290 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CCHOA_03300 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CCHOA_06245 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CCHOA_01425 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CCHOA_03200 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CCHOA_07050 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CCHOA_10630 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CCHOA_03830 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CCHOA_03380 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ccho00860]
D CCHOA_04955 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_11170 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_10510 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CCHOA_10470 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CCHOA_10495 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CCHOA_10505 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CCHOA_10480 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CCHOA_10475 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CCHOA_05995 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CCHOA_06650 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CCHOA_10500 nasF2; Uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CCHOA_07190 nasF1; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CCHOA_06120 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CCHOA_06110 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CCHOA_05755 cobJ; Precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D CCHOA_05745 ferredoxin-nitrite reductase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D CCHOA_05770 cobM; Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CCHOA_03185 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D CCHOA_05765 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CCHOA_05775 cobL; Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CCHOA_05750 cobH; Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CCHOA_07205 cobB1; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CCHOA_05735 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D CCHOA_02145 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CCHOA_07210 cobO; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CCHOA_07255 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CCHOA_08125 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CCHOA_07955 cobP; Bifunctional adenosylcobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CCHOA_07965 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CCHOA_07960 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CCHOA_08090 pspA1; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CCHOA_07220 bchI; Magnesium-chelatase 38 kDa subunit K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D CCHOA_00730 hmuO; Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ccho00130]
D CCHOA_10370 ubiE2; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CCHOA_04945 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CCHOA_10380 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CCHOA_10385 catB; Muconate cycloisomerase 1 K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CCHOA_10395 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CCHOA_10390 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CCHOA_05580 Putative esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CCHOA_10400 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CCHOA_09945 qorB; Quinone oxidoreductase 2 K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ccho00900]
D CCHOA_06665 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CCHOA_07280 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CCHOA_01690 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CCHOA_03590 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CCHOA_01695 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CCHOA_07270 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CCHOA_03865 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CCHOA_08440 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CCHOA_07845 Farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CCHOA_03760 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CCHOA_08345 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ccho00906]
D CCHOA_08445 crtB; 15-cis-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CCHOA_06055 crtL; Lycopene beta cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CCHOA_06125 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ccho00523]
D CCHOA_10420 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CCHOA_10430 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CCHOA_04945 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CCHOA_10430 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ccho00332]
D CCHOA_08615 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CCHOA_08605 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ccho00261]
D CCHOA_11080 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CCHOA_11070 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CCHOA_07045 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CCHOA_11335 yagE; putative 2-keto-3-deoxy-galactonate aldolase YagE K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CCHOA_07055 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ccho00521]
D CCHOA_07165 bglK; Beta-glucoside kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_07880 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_04535 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_02185 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CCHOA_06695 suhB2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CCHOA_10420 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CCHOA_10430 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CCHOA_07165 bglK; Beta-glucoside kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_07880 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CCHOA_04535 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ccho00525]
D CCHOA_10420 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CCHOA_10430 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ccho00401]
D CCHOA_11245 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CCHOA_02905 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08105 cobD; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_11270 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CCHOA_11695 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:ccho00998]
D CCHOA_08165 acpA; Acyl carrier protein K02078 acpP; acyl carrier protein
D CCHOA_08905 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites
D CCHOA_06255 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CCHOA_08905 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D CCHOA_03785 catD; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
C 00627 Aminobenzoate degradation
D CCHOA_07525 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CCHOA_09805 hyaB; Hydrogenase-1 large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CCHOA_09800 hoxS; Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ccho03020]
D CCHOA_10275 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CCHOA_10270 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CCHOA_09505 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CCHOA_06265 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CCHOA_03020 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ccho03010]
D CCHOA_05175 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CCHOA_07355 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CCHOA_10060 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CCHOA_09510 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CCHOA_09575 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CCHOA_00255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CCHOA_10210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CCHOA_09590 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CCHOA_09440 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CCHOA_10095 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CCHOA_09515 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CCHOA_10215 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CCHOA_09520 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CCHOA_03325 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CCHOA_07095 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CCHOA_07450 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CCHOA_10045 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CCHOA_03320 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CCHOA_10070 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CCHOA_08560 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CCHOA_10315 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CCHOA_10075 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CCHOA_10090 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CCHOA_10085 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CCHOA_09960 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CCHOA_09585 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CCHOA_10290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CCHOA_00265 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CCHOA_10295 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CCHOA_10320 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CCHOA_09445 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CCHOA_09970 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CCHOA_09565 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CCHOA_10055 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CCHOA_09500 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CCHOA_09580 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CCHOA_07410 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CCHOA_05270 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CCHOA_08630 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CCHOA_10065 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CCHOA_10080 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CCHOA_09965 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CCHOA_03640 ctc; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D CCHOA_08625 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CCHOA_03335 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CCHOA_10050 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CCHOA_09570 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CCHOA_03340 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CCHOA_03345 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CCHOA_03330 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CCHOA_05265 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CCHOA_02255 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D CCHOA_02155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_05365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_00330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_03000 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_05370 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CCHOA_03005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CCHOA_02160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ccho00970]
D CCHOA_02205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_00060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_02210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_03405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_04425 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_11250 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_11260 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_03175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_08840 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_08270 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CCHOA_02070 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CCHOA_02075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CCHOA_06615 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CCHOA_03660 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CCHOA_04960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CCHOA_02055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CCHOA_04965 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CCHOA_00930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_06625 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_06610 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_06635 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_08740 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_08860 tRNA-His K14226 tRNA-His; tRNA His
D CCHOA_00055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CCHOA_05930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_03715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_00135 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D CCHOA_05060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_08935 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_08875 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CCHOA_02035 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CCHOA_10345 tRNA-Met K14230 tRNA-Met; tRNA Met
D CCHOA_02665 tRNA-Met K14230 tRNA-Met; tRNA Met
D CCHOA_08265 tRNA-Met K14230 tRNA-Met; tRNA Met
D CCHOA_02080 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CCHOA_05505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CCHOA_11020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CCHOA_08720 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CCHOA_11265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_11165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_11275 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_11220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_10810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CCHOA_01760 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CCHOA_10350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CCHOA_10340 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CCHOA_10355 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CCHOA_06630 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_06605 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_06620 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_08130 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_04955 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_11170 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_04775 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CCHOA_04805 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CCHOA_04770 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CCHOA_06400 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CCHOA_06415 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CCHOA_08320 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CCHOA_06575 thrS; Threonine--tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CCHOA_00560 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CCHOA_01700 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CCHOA_03550 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CCHOA_06245 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CCHOA_08675 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CCHOA_11565 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CCHOA_07725 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CCHOA_01215 lysX1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CCHOA_01645 lysX2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CCHOA_04470 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CCHOA_07175 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CCHOA_06440 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CCHOA_05285 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CCHOA_05290 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CCHOA_05360 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CCHOA_09135 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ccho03060]
D CCHOA_09550 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CCHOA_10335 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CCHOA_06495 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CCHOA_06490 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CCHOA_06500 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CCHOA_00385 misCB; Membrane protein insertase MisCB precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_11840 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_02505 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_05520 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_07475 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CCHOA_07515 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CCHOA_05805 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CCHOA_04280 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CCHOA_05800 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CCHOA_07405 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CCHOA_07665 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ccho04122]
D CCHOA_04740 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CCHOA_01080 sseA1; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_02315 sseA2; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_05470 sseA3; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CCHOA_04745 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CCHOA_05155 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CCHOA_05080 ThiS family protein K03636 moaD; sulfur-carrier protein
D CCHOA_05070 moeZ; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CCHOA_05145 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
D CCHOA_05845 arc; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:ccho03018]
D CCHOA_08635 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CCHOA_03695 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CCHOA_07090 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CCHOA_04375 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CCHOA_01250 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CCHOA_04545 hypothetical protein K03628 rho; transcription termination factor Rho
D CCHOA_07040 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CCHOA_01015 dnaK1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CCHOA_01495 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_09320 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_01535 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CCHOA_03605 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CCHOA_11765 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ccho03030]
D CCHOA_02860 NAD-dependent DNA ligase LigA K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04755 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04935 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_09125 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_07645 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CCHOA_11145 dnaX2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CCHOA_10815 dnaX1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CCHOA_08565 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CCHOA_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CCHOA_00280 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CCHOA_08285 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CCHOA_00260 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08825 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08090 pspA1; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CCHOA_07400 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CCHOA_05065 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CCHOA_04760 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ccho03410]
D CCHOA_10915 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CCHOA_05025 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CCHOA_01660 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CCHOA_07575 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CCHOA_11545 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CCHOA_03215 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CCHOA_01195 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CCHOA_01330 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CCHOA_09140 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CCHOA_05065 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CCHOA_04760 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ccho03420]
D CCHOA_03665 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CCHOA_05245 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CCHOA_05215 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CCHOA_06220 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CCHOA_02610 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_02625 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_03275 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_05065 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CCHOA_04760 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CCHOA_03020 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:ccho03430]
D CCHOA_02610 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_02625 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_03275 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_03860 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CCHOA_03855 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CCHOA_00260 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08825 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_07645 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CCHOA_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CCHOA_11145 dnaX2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CCHOA_08565 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CCHOA_10815 dnaX1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CCHOA_02860 NAD-dependent DNA ligase LigA K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04755 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04935 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_09125 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04760 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ccho03440]
D CCHOA_00260 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08825 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CCHOA_08350 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CCHOA_11135 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CCHOA_06965 recombinase A K03553 recA; recombination protein RecA
D CCHOA_05065 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CCHOA_06510 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CCHOA_06505 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CCHOA_06520 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CCHOA_05035 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CCHOA_09710 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CCHOA_07645 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CCHOA_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CCHOA_11145 dnaX2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CCHOA_08565 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CCHOA_10815 dnaX1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CCHOA_02860 NAD-dependent DNA ligase LigA K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04755 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04935 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_09125 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_06250 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ccho03250]
D CCHOA_00220 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ccho02010]
D CCHOA_05095 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D CCHOA_05085 modB2; Molybdenum transport system permease protein ModB K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CCHOA_00205 idiA; Iron deficiency-induced protein A precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CCHOA_03485 phnS; Putative 2-aminoethylphosphonate-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CCHOA_11680 Bacterial extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CCHOA_00200 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein
D CCHOA_03490 modB1; Molybdenum transport system permease protein ModB K02011 afuB; iron(III) transport system permease protein
D CCHOA_11670 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D CCHOA_00195 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CCHOA_03495 potA1; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CCHOA_11675 potA2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CCHOA_00950 Substrate binding domain of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CCHOA_00835 sugC; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CCHOA_02405 lpqY; Trehalose-binding lipoprotein LpqY precursor K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CCHOA_02400 sugA; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein
D CCHOA_02395 sugB; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein
D CCHOA_09890 putative sugar-binding periplasmic protein precursor K17315 gtsA; glucose/mannose transport system substrate-binding protein
D CCHOA_09880 araP; L-arabinose transport system permease protein AraP K17316 gtsB; glucose/mannose transport system permease protein
D CCHOA_09875 araQ3; L-arabinose transport system permease protein AraQ K17317 gtsC; glucose/mannose transport system permease protein
D CCHOA_04060 lsrB; Autoinducer 2-binding protein LsrB precursor K10559 rhaS; rhamnose transport system substrate-binding protein
D CCHOA_04070 rbsC1; Ribose transport system permease protein RbsC K10560 rhaP; rhamnose transport system permease protein
D CCHOA_04075 lsrD; Autoinducer 2 import system permease protein LsrD K10561 rhaQ; rhamnose transport system permease protein
D CCHOA_04065 rbsA; Ribose import ATP-binding protein RbsA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D CCHOA_01995 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CCHOA_02000 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CCHOA_02005 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CCHOA_02010 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CCHOA_09230 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CCHOA_09240 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CCHOA_09235 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CCHOA_03940 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CCHOA_03945 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CCHOA_03950 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CCHOA_03955 gsiA2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CCHOA_07440 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein
D CCHOA_07295 dppB2; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D CCHOA_07300 oppC2; Oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D CCHOA_07305 gsiA3; Glutathione import ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein
D CCHOA_08215 fepB2; Ferrienterobactin-binding periplasmic protein precursor K23185 fepB; ferric enterobactin transport system substrate-binding protein
D CCHOA_08200 yfhA1; putative siderophore transport system permease protein YfhA K23186 fepD; iron-siderophore transport system permease protein
D CCHOA_08205 yfhA2; putative siderophore transport system permease protein YfhA K23187 fepG; iron-siderophore transport system permease protein
D CCHOA_03810 zinc/cadmium-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CCHOA_03815 znuA; High-affinity zinc uptake system binding-protein ZnuA precursor K09815 znuA; zinc transport system substrate-binding protein
D CCHOA_03825 znuB; High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D CCHOA_03820 ytrE; ABC transporter ATP-binding protein YtrE K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CCHOA_02120 cbiN; Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D CCHOA_02115 cbiM; Cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CCHOA_02125 cbiQ; Cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CCHOA_02130 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CCHOA_06975 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CCHOA_06985 ecfT2; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CCHOA_06980 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CCHOA_03970 ecfT1; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CCHOA_11295 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CCHOA_11300 tagH2; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CCHOA_04155 ABC-2 type transporter K09692 tagG; teichoic acid transport system permease protein
D CCHOA_04160 tagH1; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CCHOA_07195 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CCHOA_07200 macB1; Macrolide export ATP-binding/permease protein MacB K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CCHOA_02760 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CCHOA_02755 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS) [PATH:ccho02060]
D CCHOA_06865 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CCHOA_06875 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CCHOA_06795 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CCHOA_09950 bglF4; PTS system beta-glucoside-specific EIIBCA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CCHOA_01405 bglF1; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CCHOA_01860 bglF2; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CCHOA_05200 bglF3; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CCHOA_06870 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:ccho03070]
D CCHOA_06495 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CCHOA_06490 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CCHOA_10335 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CCHOA_09550 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CCHOA_06500 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CCHOA_00385 misCB; Membrane protein insertase MisCB precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_11840 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_02505 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_05520 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_07515 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CCHOA_07475 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CCHOA_05805 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CCHOA_04280 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CCHOA_05800 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ccho02020]
D CCHOA_10565 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CCHOA_10560 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CCHOA_01995 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CCHOA_06110 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CCHOA_03360 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CCHOA_03355 mprA; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D CCHOA_03365 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CCHOA_02490 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CCHOA_02485 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CCHOA_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CCHOA_03305 citE; Citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CCHOA_03120 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CCHOA_05115 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05110 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05100 narX1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05105 narX2; Nitrate reductase-like protein NarX K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D CCHOA_10865 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CCHOA_10860 hypothetical protein K12510 tadB; tight adherence protein B
D CCHOA_07505 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CCHOA_07510 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CCHOA_08035 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_08060 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_10795 dctA; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CCHOA_09800 hoxS; Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CCHOA_09805 hyaB; Hydrogenase-1 large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CCHOA_10925 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CCHOA_08115 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CCHOA_04115 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CCHOA_04150 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ccho02024]
D CCHOA_10635 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CCHOA_11695 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CCHOA_07865 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CCHOA_08405 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_10590 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_10925 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CCHOA_03940 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CCHOA_03945 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CCHOA_03950 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CCHOA_03955 gsiA2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CCHOA_01435 nikA; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_06485 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_08465 hbpA1; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_11310 hbpA2; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_01440 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CCHOA_08470 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CCHOA_11320 dppB3; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CCHOA_01445 ddpC; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CCHOA_08475 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CCHOA_11325 oppD; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CCHOA_01450 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CCHOA_08480 gsiA4; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CCHOA_11330 ddpF; putative D,D-dipeptide transport ATP-binding protein DdpF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CCHOA_00385 misCB; Membrane protein insertase MisCB precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_11840 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_10335 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CCHOA_09550 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CCHOA_06500 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CCHOA_02505 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_05520 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_07515 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CCHOA_07475 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CCHOA_06705 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CCHOA_03695 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ccho04980]
D CCHOA_02145 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CCHOA_05945 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-]
D CCHOA_05950 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_05955 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CCHOA_01425 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ccho01501]
D CCHOA_00900 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CCHOA_03940 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CCHOA_03945 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CCHOA_03950 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CCHOA_03955 gsiA2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CCHOA_07810 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ccho01502]
D CCHOA_05010 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CCHOA_09395 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CCHOA_07800 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CCHOA_07795 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CCHOA_07780 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ccho01503]
D CCHOA_11805 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CCHOA_00220 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ccho01000]
C 01001 Protein kinases [BR:ccho01001]
D CCHOA_01290 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CCHOA_00170 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CCHOA_00175 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CCHOA_07860 pknL; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CCHOA_10565 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CCHOA_03360 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CCHOA_02490 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CCHOA_01785 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ccho01009]
D CCHOA_00150 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CCHOA_09020 serB1; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ccho01002]
D CCHOA_07665 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CCHOA_06380 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CCHOA_09895 hybD; Hydrogenase 2 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CCHOA_01515 pcp; Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CCHOA_06040 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CCHOA_09280 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CCHOA_07890 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CCHOA_09065 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CCHOA_06010 ripA2; Peptidoglycan endopeptidase RipA precursor K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D CCHOA_01955 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CCHOA_09405 glmS2; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CCHOA_07940 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CCHOA_04440 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D CCHOA_10235 cbh; Choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D CCHOA_00390 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CCHOA_10935 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CCHOA_00465 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CCHOA_01335 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CCHOA_09215 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CCHOA_08775 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CCHOA_11415 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CCHOA_07975 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CCHOA_04210 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CCHOA_01490 dapE1; putative succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CCHOA_07260 map; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CCHOA_09540 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CCHOA_01600 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CCHOA_03365 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CCHOA_09475 epr; Minor extracellular protease Epr precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CCHOA_11280 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CCHOA_09085 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CCHOA_01585 dac; D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CCHOA_08700 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CCHOA_08705 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CCHOA_02650 lon; Lon protease K07177 K07177; Lon-like protease
D CCHOA_06850 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CCHOA_07405 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CCHOA_08065 pip1; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 01003 Glycosyltransferases [BR:ccho01003]
D CCHOA_05720 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CCHOA_03535 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CCHOA_06555 pimA; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CCHOA_07885 pimB2; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CCHOA_04255 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CCHOA_04565 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CCHOA_06095 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CCHOA_11395 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CCHOA_11390 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CCHOA_06640 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CCHOA_00885 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CCHOA_09490 hypothetical protein K22902 K22902; D-galactosaminyltransferase
D CCHOA_11345 glfT2; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CCHOA_00585 glfT1; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CCHOA_02425 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CCHOA_01740 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ccho01005]
D CCHOA_04565 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ccho01011]
D CCHOA_02150 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CCHOA_10595 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CCHOA_07775 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CCHOA_07790 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CCHOA_07805 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CCHOA_05010 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CCHOA_09395 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CCHOA_08965 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CCHOA_07795 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CCHOA_07780 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CCHOA_05895 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CCHOA_11785 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CCHOA_07810 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CCHOA_00165 pbpA1; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CCHOA_09085 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CCHOA_01585 dac; D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CCHOA_07890 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CCHOA_09065 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CCHOA_06010 ripA2; Peptidoglycan endopeptidase RipA precursor K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D CCHOA_00390 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CCHOA_10935 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CCHOA_06390 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CCHOA_11805 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ccho01004]
D CCHOA_10625 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CCHOA_06535 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CCHOA_00635 ppsA; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13
D CCHOA_08405 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_10590 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_00620 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D CCHOA_00630 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D CCHOA_07875 plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ccho01006]
D CCHOA_07845 Farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CCHOA_03760 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CCHOA_08345 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CCHOA_08445 crtB; 15-cis-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CCHOA_06935 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CCHOA_10400 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CCHOA_06120 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CCHOA_00595 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:ccho01007]
D CCHOA_04955 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_11170 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_05360 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CCHOA_09135 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CCHOA_01700 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CCHOA_04470 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CCHOA_03550 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CCHOA_07725 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CCHOA_08675 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CCHOA_11565 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CCHOA_01215 lysX1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CCHOA_01645 lysX2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CCHOA_06415 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CCHOA_06440 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CCHOA_08320 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CCHOA_00560 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CCHOA_07175 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CCHOA_06575 thrS; Threonine--tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CCHOA_06400 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CCHOA_05285 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CCHOA_05290 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CCHOA_00970 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CCHOA_02905 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08105 cobD; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_11270 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CCHOA_08460 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CCHOA_05325 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CCHOA_05455 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CCHOA_10470 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CCHOA_07970 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CCHOA_03090 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ccho00194]
D CCHOA_04620 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CCHOA_04615 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CCHOA_04610 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CCHOA_04605 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CCHOA_04590 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CCHOA_04585 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CCHOA_04580 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CCHOA_04575 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ccho03000]
D CCHOA_11425 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CCHOA_06810 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CCHOA_04825 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CCHOA_00840 glpR; Glycerol-3-phosphate regulon repressor K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D CCHOA_06855 glcR; HTH-type transcriptional repressor GlcR K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CCHOA_01810 ccpA2; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CCHOA_04080 degA1; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CCHOA_04520 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CCHOA_02875 tetR2; Tetracycline repressor protein class A K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D CCHOA_06035 acnR1; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D CCHOA_02140 transcriptional regulator MalT K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CCHOA_01030 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CCHOA_08325 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CCHOA_10925 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CCHOA_10415 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CCHOA_06995 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D CCHOA_06755 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CCHOA_02360 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CCHOA_01000 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CCHOA_01410 licT; Transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D CCHOA_02440 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CCHOA_02565 whiB1; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CCHOA_10980 whiB2; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CCHOA_11820 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CCHOA_01685 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CCHOA_05335 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CCHOA_08385 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CCHOA_04410 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D CCHOA_06155 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D CCHOA_01150 deoR; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D CCHOA_06310 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CCHOA_06840 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CCHOA_07825 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ccho03021]
D CCHOA_03020 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CCHOA_09505 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CCHOA_10275 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CCHOA_10270 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CCHOA_06265 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CCHOA_06705 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D CCHOA_06750 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CCHOA_02555 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CCHOA_09310 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CCHOA_11065 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CCHOA_04270 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CCHOA_07145 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CCHOA_06340 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CCHOA_10330 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CCHOA_03740 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CCHOA_04545 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ccho03019]
D CCHOA_08635 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CCHOA_07580 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CCHOA_07040 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CCHOA_08290 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CCHOA_08855 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CCHOA_04375 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CCHOA_01250 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CCHOA_03695 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CCHOA_07090 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CCHOA_04545 hypothetical protein K03628 rho; transcription termination factor Rho
D CCHOA_01015 dnaK1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CCHOA_01495 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_09320 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_01535 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CCHOA_03605 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CCHOA_11765 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CCHOA_06215 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D CCHOA_05790 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CCHOA_05795 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CCHOA_06835 hrpB1; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CCHOA_10145 hrpB2; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ccho03011]
D CCHOA_05175 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CCHOA_07355 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CCHOA_10060 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CCHOA_09510 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CCHOA_09575 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CCHOA_00255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CCHOA_10210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CCHOA_09590 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CCHOA_09440 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CCHOA_10095 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CCHOA_09515 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CCHOA_10215 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CCHOA_09520 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CCHOA_03325 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CCHOA_07095 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CCHOA_07450 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CCHOA_10045 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CCHOA_03320 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CCHOA_10070 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CCHOA_08560 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CCHOA_10315 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CCHOA_10075 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CCHOA_10090 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CCHOA_10085 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CCHOA_09960 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CCHOA_09585 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CCHOA_00265 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CCHOA_10295 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CCHOA_10320 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CCHOA_10290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CCHOA_09445 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CCHOA_09970 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CCHOA_09565 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CCHOA_10055 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CCHOA_09500 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CCHOA_09580 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CCHOA_07410 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CCHOA_05270 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CCHOA_08630 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CCHOA_10065 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CCHOA_10080 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CCHOA_09965 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CCHOA_08625 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CCHOA_03335 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CCHOA_10050 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CCHOA_09570 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CCHOA_03340 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CCHOA_03345 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CCHOA_03330 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CCHOA_05265 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CCHOA_02255 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D CCHOA_03640 ctc; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D CCHOA_02155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_05365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_00330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_03000 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_05370 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CCHOA_03005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CCHOA_02160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ccho03009]
D CCHOA_07580 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CCHOA_08855 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CCHOA_08355 era; GTPase Era K03595 era; GTPase
D CCHOA_08620 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CCHOA_07145 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CCHOA_06340 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CCHOA_10330 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CCHOA_03580 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CCHOA_06240 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CCHOA_05045 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CCHOA_08375 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CCHOA_11830 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CCHOA_07820 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CCHOA_03540 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CCHOA_05410 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CCHOA_04235 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CCHOA_01705 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CCHOA_07330 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CCHOA_00365 rluA1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CCHOA_04050 rluA2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CCHOA_05485 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CCHOA_07660 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CCHOA_09375 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CCHOA_07435 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CCHOA_08635 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CCHOA_06395 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CCHOA_04375 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CCHOA_02530 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CCHOA_05495 der; GTPase Der K03977 engA; GTPase
D CCHOA_06900 hflX; GTPase HflX K03665 hflX; GTPase
D CCHOA_04560 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CCHOA_06470 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CCHOA_07130 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CCHOA_07150 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D CCHOA_11460 ribosome-associated protein K14761 rlbA; ribosome-associated protein
D CCHOA_08590 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CCHOA_08365 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CCHOA_03890 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D CCHOA_07585 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ccho03016]
D CCHOA_08290 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CCHOA_04955 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_11170 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_07175 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CCHOA_07725 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CCHOA_11565 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CCHOA_03550 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CCHOA_04470 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CCHOA_01215 lysX1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CCHOA_01645 lysX2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CCHOA_06415 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CCHOA_06400 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CCHOA_08320 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CCHOA_06575 thrS; Threonine--tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CCHOA_00560 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CCHOA_01700 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CCHOA_08675 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CCHOA_06440 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CCHOA_05285 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CCHOA_05290 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CCHOA_05360 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CCHOA_09135 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CCHOA_06745 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CCHOA_05850 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CCHOA_00780 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CCHOA_09495 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CCHOA_07105 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CCHOA_04740 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CCHOA_04560 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CCHOA_06935 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CCHOA_03205 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CCHOA_11845 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CCHOA_08945 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CCHOA_02545 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CCHOA_11235 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CCHOA_06955 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CCHOA_07430 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CCHOA_09205 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CCHOA_05280 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CCHOA_00365 rluA1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CCHOA_04050 rluA2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CCHOA_04745 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CCHOA_10670 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D CCHOA_01970 Aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D CCHOA_11210 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CCHOA_01590 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CCHOA_09370 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CCHOA_09390 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CCHOA_07090 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ccho03012]
D CCHOA_07135 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CCHOA_05260 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CCHOA_07350 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CCHOA_10150 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CCHOA_10200 fusA; Elongation factor G K02355 fusA; elongation factor G
D CCHOA_04550 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CCHOA_07340 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D CCHOA_04555 prmC1; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CCHOA_03635 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CCHOA_09530 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CCHOA_06345 efp; Elongation factor P K02356 efp; elongation factor P
D CCHOA_02750 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CCHOA_03625 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ccho03110]
D CCHOA_01060 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CCHOA_01650 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CCHOA_08695 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CCHOA_01015 dnaK1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CCHOA_03465 dnaK3; Chaperone protein DnaK K04044 hscA; molecular chaperone HscA
D CCHOA_01495 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_09320 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_01025 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CCHOA_08380 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CCHOA_01020 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CCHOA_02835 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CCHOA_09325 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CCHOA_01600 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CCHOA_04575 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CCHOA_06590 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CCHOA_11530 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CCHOA_09725 hypA; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CCHOA_09900 hydrogenase nickel incorporation protein HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CCHOA_09730 hypB; Hydrogenase isoenzymes nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CCHOA_09475 epr; Minor extracellular protease Epr precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CCHOA_00220 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CCHOA_06450 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CCHOA_00305 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin
D CCHOA_11800 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
D CCHOA_04650 Thioredoxin C-1 K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:ccho04131]
D CCHOA_08645 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CCHOA_03630 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_06200 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_10580 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CCHOA_02975 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:ccho04121]
D CCHOA_05835 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:ccho03051]
D CCHOA_05845 arc; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D CCHOA_05830 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CCHOA_05815 hypothetical protein K13572 pafB; proteasome accessory factor B
D CCHOA_05810 hypothetical protein K13573 pafC; proteasome accessory factor C
D CCHOA_05840 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:ccho03032]
D CCHOA_11425 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CCHOA_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CCHOA_00280 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CCHOA_08285 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CCHOA_00260 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08825 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_07645 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CCHOA_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CCHOA_08565 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CCHOA_10815 dnaX1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CCHOA_02860 NAD-dependent DNA ligase LigA K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04755 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04935 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_09125 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11145 dnaX2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CCHOA_08090 pspA1; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CCHOA_07400 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CCHOA_05065 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CCHOA_04760 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CCHOA_00045 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CCHOA_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CCHOA_10825 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ccho03036]
D CCHOA_11425 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CCHOA_07580 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CCHOA_00415 lsr2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D CCHOA_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CCHOA_04825 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CCHOA_07530 smc2; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D CCHOA_05450 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CCHOA_05475 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CCHOA_02755 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CCHOA_07810 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CCHOA_07020 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CCHOA_07770 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CCHOA_07785 ftsW3; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CCHOA_02760 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CCHOA_07765 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CCHOA_11805 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CCHOA_07750 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CCHOA_05445 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CCHOA_11825 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CCHOA_11820 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CCHOA_11830 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CCHOA_07375 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CCHOA_05440 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CCHOA_04285 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CCHOA_06205 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ccho03400]
D CCHOA_11445 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CCHOA_11640 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CCHOA_05025 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CCHOA_01660 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CCHOA_10915 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CCHOA_03020 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CCHOA_01305 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CCHOA_11365 nudG; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CCHOA_06680 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CCHOA_01195 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CCHOA_07575 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CCHOA_11545 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CCHOA_03215 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CCHOA_01330 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CCHOA_09140 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CCHOA_04760 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CCHOA_05065 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CCHOA_05245 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CCHOA_05215 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CCHOA_06220 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CCHOA_02610 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_02625 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_03275 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CCHOA_10275 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CCHOA_10270 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CCHOA_09505 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CCHOA_06265 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CCHOA_03665 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CCHOA_03860 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CCHOA_03855 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CCHOA_07645 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CCHOA_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CCHOA_08565 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CCHOA_10815 dnaX1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CCHOA_02860 NAD-dependent DNA ligase LigA K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04755 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_04935 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_09125 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11120 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CCHOA_11145 dnaX2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CCHOA_00260 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08825 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_06965 recombinase A K03553 recA; recombination protein RecA
D CCHOA_06510 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CCHOA_06505 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CCHOA_06520 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CCHOA_06250 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CCHOA_01675 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D CCHOA_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CCHOA_05035 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CCHOA_09710 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CCHOA_08350 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CCHOA_11135 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CCHOA_05420 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CCHOA_02810 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CCHOA_00680 ygbT; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CCHOA_01935 cas3; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CCHOA_00990 AAA-like domain protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CCHOA_00045 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CCHOA_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CCHOA_10825 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CCHOA_01250 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CCHOA_07700 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CCHOA_06850 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CCHOA_09260 DNA polymerase IV K14161 imuB; protein ImuB
D CCHOA_09225 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CCHOA_06960 recX; Regulatory protein RecX K03565 recX; regulatory protein
D CCHOA_08995 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CCHOA_03210 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CCHOA_05000 mutX; 8-oxo-dGTP diphosphatase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CCHOA_05435 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CCHOA_02270 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CCHOA_09035 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CCHOA_07125 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ccho03029]
D CCHOA_07135 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CCHOA_05260 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CCHOA_07350 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CCHOA_10150 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CCHOA_10200 fusA; Elongation factor G K02355 fusA; elongation factor G
D CCHOA_08355 era; GTPase Era K03595 era; GTPase
D CCHOA_05360 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CCHOA_11565 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CCHOA_06415 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CCHOA_08320 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CCHOA_04470 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CCHOA_04775 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CCHOA_04805 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CCHOA_04770 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CCHOA_00260 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_08825 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CCHOA_01015 dnaK1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CCHOA_01020 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CCHOA_01495 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_09320 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_09325 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CCHOA_01025 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CCHOA_08380 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CCHOA_04740 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CCHOA_04285 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CCHOA_06120 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CCHOA_06110 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CCHOA_00385 misCB; Membrane protein insertase MisCB precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_11840 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ccho02000]
D CCHOA_04320 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CCHOA_07065 yheI2; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CCHOA_09695 apxIB; Toxin RTX-I translocation ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CCHOA_09705 msbA; Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CCHOA_05920 irtB1; Iron import ATP-binding/permease protein IrtB K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D CCHOA_03595 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CCHOA_05925 yheI1; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K02021 ABC.MR; putative ABC transport system ATP-binding protein
D CCHOA_05095 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D CCHOA_05085 modB2; Molybdenum transport system permease protein ModB K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CCHOA_00205 idiA; Iron deficiency-induced protein A precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CCHOA_03485 phnS; Putative 2-aminoethylphosphonate-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CCHOA_11680 Bacterial extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CCHOA_00200 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein
D CCHOA_03490 modB1; Molybdenum transport system permease protein ModB K02011 afuB; iron(III) transport system permease protein
D CCHOA_11670 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D CCHOA_00195 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CCHOA_03495 potA1; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CCHOA_11675 potA2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CCHOA_00950 Substrate binding domain of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CCHOA_10170 Putative thiamine biosynthesis protein K24985 ribY; putative riboflavin transport system substrate-binding protein
D CCHOA_10165 opuCD; Carnitine transport permease protein OpuCD K24986 ribX; putative riboflavin transport system permease protein
D CCHOA_00835 sugC; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CCHOA_01795 maltose ABC transporter periplasmic protein K25086 musE; maltose transport system substrate-binding protein
D CCHOA_01800 lacF2; Lactose transport system permease protein LacF K25087 musF; maltose transport system permease protein
D CCHOA_01805 araQ2; L-arabinose transport system permease protein AraQ K25088 musG; maltose transport system permease protein
D CCHOA_09890 putative sugar-binding periplasmic protein precursor K17315 gtsA; glucose/mannose transport system substrate-binding protein
D CCHOA_09880 araP; L-arabinose transport system permease protein AraP K17316 gtsB; glucose/mannose transport system permease protein
D CCHOA_09875 araQ3; L-arabinose transport system permease protein AraQ K17317 gtsC; glucose/mannose transport system permease protein
D CCHOA_02405 lpqY; Trehalose-binding lipoprotein LpqY precursor K10236 thuE; trehalose/maltose transport system substrate-binding protein
D CCHOA_02400 sugA; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein
D CCHOA_02395 sugB; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein
D CCHOA_04060 lsrB; Autoinducer 2-binding protein LsrB precursor K10559 rhaS; rhamnose transport system substrate-binding protein
D CCHOA_04070 rbsC1; Ribose transport system permease protein RbsC K10560 rhaP; rhamnose transport system permease protein
D CCHOA_04075 lsrD; Autoinducer 2 import system permease protein LsrD K10561 rhaQ; rhamnose transport system permease protein
D CCHOA_04065 rbsA; Ribose import ATP-binding protein RbsA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D CCHOA_00800 msmE1; Multiple sugar-binding protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CCHOA_07320 msmE2; Multiple sugar-binding protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CCHOA_00805 lacF1; Lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein
D CCHOA_07315 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D CCHOA_00810 araQ1; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CCHOA_07310 ycjP; Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CCHOA_09605 D-ribose transporter subunit RbsB K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CCHOA_09600 rbsC2; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein
D CCHOA_09595 araG; Arabinose import ATP-binding protein AraG K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CCHOA_01995 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CCHOA_02000 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CCHOA_02005 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CCHOA_02010 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CCHOA_09230 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CCHOA_09240 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CCHOA_09235 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CCHOA_00100 glnH1; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CCHOA_01295 glnH2; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CCHOA_00090 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D CCHOA_00085 glnQ; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CCHOA_03940 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CCHOA_03945 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CCHOA_03950 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CCHOA_03955 gsiA2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CCHOA_07440 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein
D CCHOA_07295 dppB2; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D CCHOA_07300 oppC2; Oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D CCHOA_07305 gsiA3; Glutathione import ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein
D CCHOA_01435 nikA; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_06485 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_08465 hbpA1; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_11310 hbpA2; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CCHOA_01440 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CCHOA_08470 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CCHOA_11320 dppB3; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CCHOA_01445 ddpC; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CCHOA_08475 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CCHOA_11325 oppD; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CCHOA_01450 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CCHOA_08480 gsiA4; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CCHOA_11330 ddpF; putative D,D-dipeptide transport ATP-binding protein DdpF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CCHOA_00715 hmuT; Hemin-binding periplasmic protein HmuT precursor K25132 hmuT; heme transport system substrate-binding protein
D CCHOA_00740 hmuU1; Hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D CCHOA_00735 hmuV1; Hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D CCHOA_08215 fepB2; Ferrienterobactin-binding periplasmic protein precursor K23185 fepB; ferric enterobactin transport system substrate-binding protein
D CCHOA_08200 yfhA1; putative siderophore transport system permease protein YfhA K23186 fepD; iron-siderophore transport system permease protein
D CCHOA_08205 yfhA2; putative siderophore transport system permease protein YfhA K23187 fepG; iron-siderophore transport system permease protein
D CCHOA_01375 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CCHOA_09990 iron-enterobactin transporter periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CCHOA_01370 hmuU2; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D CCHOA_10000 feuC; Iron-uptake system permease protein FeuC K02015 ABC.FEV.P; iron complex transport system permease protein
D CCHOA_10005 yfhA3; putative siderophore transport system permease protein YfhA K02015 ABC.FEV.P; iron complex transport system permease protein
D CCHOA_01365 hmuV2; Hemin import ATP-binding protein HmuV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CCHOA_04715 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CCHOA_08210 yusV1; putative siderophore transport system ATP-binding protein YusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CCHOA_10010 yusV2; putative siderophore transport system ATP-binding protein YusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CCHOA_11710 high-affinity zinc transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CCHOA_03810 zinc/cadmium-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CCHOA_03815 znuA; High-affinity zinc uptake system binding-protein ZnuA precursor K09815 znuA; zinc transport system substrate-binding protein
D CCHOA_03825 znuB; High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D CCHOA_03820 ytrE; ABC transporter ATP-binding protein YtrE K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CCHOA_04690 mntB; Manganese transport system membrane protein MntB K09819 ABC.MN.P; manganese/iron transport system permease protein
D CCHOA_04685 znuC; Zinc import ATP-binding protein ZnuC K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D CCHOA_02120 cbiN; Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D CCHOA_02125 cbiQ; Cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CCHOA_02115 cbiM; Cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CCHOA_02130 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CCHOA_06975 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CCHOA_06985 ecfT2; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CCHOA_06980 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CCHOA_03970 ecfT1; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CCHOA_03965 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CCHOA_03960 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D CCHOA_11295 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CCHOA_11300 tagH2; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CCHOA_04155 ABC-2 type transporter K09692 tagG; teichoic acid transport system permease protein
D CCHOA_04160 tagH1; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CCHOA_07195 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CCHOA_07200 macB1; Macrolide export ATP-binding/permease protein MacB K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CCHOA_02760 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CCHOA_02755 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CCHOA_01315 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CCHOA_06105 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CCHOA_08330 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CCHOA_09155 drrB; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D CCHOA_01310 yxlF; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CCHOA_06100 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CCHOA_08335 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CCHOA_09150 drrA3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CCHOA_00355 ytrF; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D CCHOA_07705 macB2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D CCHOA_11440 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CCHOA_00360 yxdL1; ABC transporter ATP-binding protein YxdL K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CCHOA_00510 yxdL2; ABC transporter ATP-binding protein YxdL K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CCHOA_07710 macB3; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CCHOA_11435 macB4; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CCHOA_06075 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CCHOA_11740 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CCHOA_07120 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D CCHOA_00545 proP; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CCHOA_05185 nanT; Putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D CCHOA_05120 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CCHOA_05130 narT; putative nitrate transporter NarT K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CCHOA_07625 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D CCHOA_10230 norB; Quinolone resistance protein NorB K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CCHOA_03980 naiP; Putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CCHOA_06865 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CCHOA_06875 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CCHOA_06795 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CCHOA_11000 ptsG; PTS system glucose-specific EIICBA component K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D CCHOA_09950 bglF4; PTS system beta-glucoside-specific EIIBCA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CCHOA_01405 bglF1; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CCHOA_01860 bglF2; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CCHOA_05200 bglF3; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CCHOA_02615 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D CCHOA_10640 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CCHOA_10035 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D CCHOA_04860 ykuT1; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D CCHOA_08800 ykuT2; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D CCHOA_04305 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D CCHOA_02170 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D CCHOA_08360 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CCHOA_05550 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CCHOA_05555 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CCHOA_04200 gabP; GABA permease K16237 aroP; aromatic amino acid permease
D CCHOA_04890 czcD; Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CCHOA_00765 ydfJ1; Membrane protein YdfJ K20470 mmpL3; trehalose monomycolate/heme transporter
D CCHOA_07650 EamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D CCHOA_04660 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D CCHOA_04465 lutP; L-lactate permease K03303 lutP; lactate permease
D CCHOA_04390 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D CCHOA_03155 actP1; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D CCHOA_09110 actP2; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D CCHOA_10795 dctA; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CCHOA_10780 Na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D CCHOA_01865 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D CCHOA_01870 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D CCHOA_02985 pucK; Uric acid permease PucK K24206 uacT; uric acid transporter
D CCHOA_03060 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D CCHOA_02525 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D CCHOA_01485 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CCHOA_11030 mrpA2; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CCHOA_01480 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CCHOA_11035 mnhC1; Na(+)/H(+) antiporter subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CCHOA_01475 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CCHOA_11040 mrpD2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CCHOA_01470 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CCHOA_01465 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CCHOA_11050 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CCHOA_01460 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CCHOA_11055 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CCHOA_11785 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CCHOA_04820 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CCHOA_11470 rhtC; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CCHOA_11180 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CCHOA_07560 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CCHOA_08340 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CCHOA_07785 ftsW3; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CCHOA_00345 efeM; putative iron uptake system component EfeM precursor K07224 efeO; iron uptake system component EfeO
D CCHOA_00350 efeN1; putative deferrochelatase/peroxidase EfeN precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CCHOA_10450 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D CCHOA_05115 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05110 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_05100 narX1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D CCHOA_00760 hypothetical protein K20468 K20468; putative heme transporter
D CCHOA_11655 putative Mg(2+) transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CCHOA_01815 hypothetical protein K25089 musI; membrane protein
D CCHOA_06595 hypothetical protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:ccho02044]
D CCHOA_06380 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CCHOA_10865 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CCHOA_10860 hypothetical protein K12510 tadB; tight adherence protein B
D CCHOA_07745 YGGT family protein K02221 yggT; YggT family protein
D CCHOA_08575 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D CCHOA_08570 ComEC family competence protein K02238 comEC; competence protein ComEC
D CCHOA_09465 eccCa1; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC
D CCHOA_09470 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D CCHOA_09475 epr; Minor extracellular protease Epr precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CCHOA_09455 esxB; ESAT-6-like protein EsxB K14956 esx; ESAT-6 family protein
D CCHOA_09450 esxA; 6 kDa early secretory antigenic target K14956 esx; ESAT-6 family protein
D CCHOA_02505 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_05520 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CCHOA_06495 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CCHOA_10335 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CCHOA_06490 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CCHOA_09550 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CCHOA_07475 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CCHOA_07515 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CCHOA_06500 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CCHOA_00385 misCB; Membrane protein insertase MisCB precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_11840 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CCHOA_05805 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CCHOA_04280 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CCHOA_05800 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ccho02042]
D CCHOA_08360 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CCHOA_05550 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CCHOA_05555 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:ccho02022]
D CCHOA_10565 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CCHOA_10560 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CCHOA_03360 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D CCHOA_03355 mprA; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D CCHOA_02490 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CCHOA_02485 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CCHOA_01785 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CCHOA_01780 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:ccho02035]
D CCHOA_06380 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CCHOA_10865 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ccho04812]
D CCHOA_07765 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CCHOA_05445 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CCHOA_11825 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CCHOA_11820 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ccho04147]
D CCHOA_03695 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CCHOA_03630 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_06200 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CCHOA_06195 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CCHOA_02975 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CCHOA_00220 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CCHOA_01495 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_09320 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CCHOA_01015 dnaK1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CCHOA_03250 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CCHOA_09290 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CCHOA_09295 guaB3; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CCHOA_10150 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CCHOA_00445 ldhA; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CCHOA_11740 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CCHOA_08405 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_10590 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CCHOA_09545 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CCHOA_06480 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CCHOA_05350 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CCHOA_05345 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CCHOA_07070 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CCHOA_08080 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CCHOA_01570 glgB1; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CCHOA_04700 glgB2; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CCHOA_02290 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CCHOA_08035 glnA1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_08060 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CCHOA_10495 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CCHOA_04905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CCHOA_03300 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CCHOA_10720 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CCHOA_04735 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CCHOA_06140 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CCHOA_06190 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CCHOA_10580 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ccho02048]
D CCHOA_00680 ygbT; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CCHOA_01935 cas3; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D CCHOA_00685 ygbF; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CCHOA_01940 cas4; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CCHOA_00650 cas1; CRISPR-associated nuclease/helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CCHOA_00655 cse1; CRISPR-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA
D CCHOA_00660 CRISPR-associated protein Cse2 K19046 casB; CRISPR system Cascade subunit CasB
D CCHOA_00665 casC; CRISPR system Cascade subunit CasC K19124 casC; CRISPR system Cascade subunit CasC
D CCHOA_00670 CRISPR-associated protein K19125 casD; CRISPR system Cascade subunit CasD
D CCHOA_00675 cse2; CRISPR-associated endoribonuclease Cse3 K19126 casE; CRISPR system Cascade subunit CasE
D CCHOA_01930 cas2; CRISPR-associated endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D CCHOA_11425 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CCHOA_11755 putative methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CCHOA_04410 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D CCHOA_06155 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D CCHOA_07765 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CCHOA_04955 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_11170 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CCHOA_04740 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ccho01504]
D CCHOA_10230 norB; Quinolone resistance protein NorB K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CCHOA_10780 Na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D CCHOA_07625 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ccho03100]
D CCHOA_02205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_00060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_02210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_03405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CCHOA_04425 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_11250 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_11260 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_03175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_08840 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CCHOA_08270 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CCHOA_02070 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CCHOA_02075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CCHOA_06615 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CCHOA_03660 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CCHOA_04960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CCHOA_02055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CCHOA_04965 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CCHOA_00930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_06625 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_06610 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_06635 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_08740 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CCHOA_08860 tRNA-His K14226 tRNA-His; tRNA His
D CCHOA_00055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CCHOA_05930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_03715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_00135 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D CCHOA_05060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_08935 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CCHOA_08875 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CCHOA_02035 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CCHOA_10345 tRNA-Met K14230 tRNA-Met; tRNA Met
D CCHOA_02665 tRNA-Met K14230 tRNA-Met; tRNA Met
D CCHOA_08265 tRNA-Met K14230 tRNA-Met; tRNA Met
D CCHOA_02080 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CCHOA_05505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CCHOA_11020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CCHOA_08720 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CCHOA_11265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_11165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_11275 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_11220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CCHOA_10810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CCHOA_01760 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CCHOA_10350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CCHOA_10340 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CCHOA_10355 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CCHOA_06630 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_06605 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_06620 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_08130 tRNA-Val K14237 tRNA-Val; tRNA Val
D CCHOA_02155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_05365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_00330 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_03000 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CCHOA_05370 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CCHOA_03005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CCHOA_02160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CCHOA_11385 Sepiapterin reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CCHOA_03130 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CCHOA_04815 gpr; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CCHOA_11380 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CCHOA_10365 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CCHOA_09045 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CCHOA_06115 qorA1; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CCHOA_07240 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CCHOA_03910 ahpF; NADH dehydrogenase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D CCHOA_00440 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CCHOA_06645 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CCHOA_06580 efeN2; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CCHOA_10300 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CCHOA_03905 ahpC; Alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D CCHOA_08045 ohrB; Organic hydroperoxide resistance protein OhrB K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CCHOA_09935 yfeX; putative deferrochelatase/peroxidase YfeX K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CCHOA_09040 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CCHOA_01225 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CCHOA_01455 Putative glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D CCHOA_05610 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CCHOA_05675 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CCHOA_01990 mshD2; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CCHOA_05725 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CCHOA_03055 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CCHOA_00845 lnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D CCHOA_10585 mshA2; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CCHOA_02965 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CCHOA_00110 prenyltransferase K23155 crtEb; lycopene elongase/hydratase (flavuxanthin-forming) [EC:2.5.1.149]
D CCHOA_09930 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CCHOA_05030 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CCHOA_03430 polA1; DNA polymerase I, thermostable K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CCHOA_08055 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CCHOA_08195 fes; Enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D CCHOA_08425 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CCHOA_00615 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D CCHOA_08815 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CCHOA_08585 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CCHOA_03565 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CCHOA_04635 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D CCHOA_05210 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D CCHOA_01345 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CCHOA_04025 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CCHOA_03750 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CCHOA_01045 ramA; (R)-stereoselective amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CCHOA_09400 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CCHOA_05890 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CCHOA_03125 accD4; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D CCHOA_00690 accD1; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D CCHOA_03140 Calcium-transporting ATPase 1 K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CCHOA_04460 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CCHOA_04455 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CCHOA_04450 lutC; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CCHOA_06065 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CCHOA_04725 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D CCHOA_07540 pdhD; Dihydrolipoyl dehydrogenase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D CCHOA_08850 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D CCHOA_02265 Putative NrdI-like protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CCHOA_07755 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CCHOA_03040 rpfA; Resuscitation-promoting factor RpfA precursor K21687 rpfA; resuscitation-promoting factor RpfA
D CCHOA_03570 rpf1; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
D CCHOA_03575 rpf2; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
D CCHOA_10750 Undecaprenyl-phosphate mannosyltransferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
D CCHOA_07215 bchD; Magnesium-chelatase 60 kDa subunit K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
C 99999 Others
D CCHOA_03520 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase
D CCHOA_04840 hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CCHOA_03045 cspD; Cold shock protein CspD K03704 cspA; cold shock protein
D CCHOA_10830 cspA; putative cold shock protein A K03704 cspA; cold shock protein
D CCHOA_07415 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CCHOA_08985 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CCHOA_08715 tig; Trigger factor K03545 tig; trigger factor
D CCHOA_02765 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CCHOA_09910 hypC1; Hydrogenase isoenzymes formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D CCHOA_09915 hypC2; Hydrogenase isoenzymes formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D CCHOA_09920 hypD; Hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CCHOA_09610 hypE; Hydrogenase isoenzymes formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CCHOA_09715 hypF; Carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D CCHOA_02260 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D CCHOA_10445 ccsB; Cytochrome c biogenesis protein CcsB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CCHOA_03875 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CCHOA_05860 rexB; ATP-dependent helicase/deoxyribonuclease subunit B K07465 K07465; putative RecB family exonuclease
D CCHOA_07380 hypothetical protein K04096 smf; DNA processing protein
D CCHOA_06405 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CCHOA_04420 Transposase K07483 K07483; transposase
D CCHOA_09635 Transposase K07483 K07483; transposase
D CCHOA_11585 hypothetical protein K07483 K07483; transposase
D CCHOA_04415 Integrase core domain protein K07497 K07497; putative transposase
D CCHOA_09625 Integrase core domain protein K07497 K07497; putative transposase
D CCHOA_09630 hypothetical protein K07497 K07497; putative transposase
D CCHOA_09840 Integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CCHOA_06990 PspA/IM30 family protein K03969 pspA; phage shock protein A
D CCHOA_11140 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CCHOA_03995 yfdC; Inner membrane protein YfdC K21990 yfdC; formate-nitrite transporter family protein
D CCHOA_05465 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CCHOA_09165 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CCHOA_07085 sglT; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CCHOA_03885 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CCHOA_09345 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CCHOA_02180 alsT1; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CCHOA_07570 alsT2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CCHOA_08805 brnQ; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CCHOA_01165 nupX; Nucleoside permease NupX K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D CCHOA_05165 aspT; Aspartate/alanine antiporter K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CCHOA_04010 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CCHOA_08370 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CCHOA_04930 guaB1; Inosine-5'-monophosphate dehydrogenase K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D CCHOA_11410 acm; Lysozyme M1 precursor K07273 acm; lysozyme
D CCHOA_07720 macA; Macrolide export protein MacA K02005 ABC.CD.TX; HlyD family secretion protein
D CCHOA_10755 hypothetical protein K09153 K09153; small membrane protein
C 99994 Others
D CCHOA_02020 hypothetical protein K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CCHOA_01190 putative acyltransferase K02348 elaA; ElaA protein
D CCHOA_10835 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CCHOA_11215 ydfJ2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CCHOA_11735 ydfJ3; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CCHOA_11535 hdl_IVa; (S)-2-haloacid dehalogenase 4A K07025 K07025; putative hydrolase of the HAD superfamily
D CCHOA_06085 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CCHOA_06080 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CCHOA_09100 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein
D CCHOA_05730 phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA
D CCHOA_00400 hypothetical protein K07146 K07146; UPF0176 protein
D CCHOA_11750 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D CCHOA_00860 hypothetical protein K04750 phnB; PhnB protein
D CCHOA_01115 yqjA1; Inner membrane protein YqjA K03975 dedA; membrane-associated protein
D CCHOA_05680 yqjA2; Inner membrane protein YqjA K03975 dedA; membrane-associated protein
D CCHOA_00935 smc1; Chromosome partition protein Smc K01421 yhgE; putative membrane protein
D CCHOA_05055 hypothetical protein K08974 K08974; putative membrane protein
D CCHOA_05510 hypothetical protein K09858 K09858; SEC-C motif domain protein
D CCHOA_01105 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CCHOA_00775 NYN domain protein K06860 K06860; putative heme uptake system protein
D CCHOA_08395 hypothetical protein K06867 K06867; uncharacterized protein
D CCHOA_09685 hypothetical protein K06871 K06871; uncharacterized protein
D CCHOA_04185 hypothetical protein K06926 K06926; uncharacterized protein
D CCHOA_02100 Acetyltransferase (GNAT) family protein K06975 K06975; uncharacterized protein
D CCHOA_11455 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D CCHOA_02230 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D CCHOA_06420 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D CCHOA_06315 Epimerase family protein K07071 K07071; uncharacterized protein
D CCHOA_09555 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CCHOA_11015 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D CCHOA_01140 gpt; Xanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D CCHOA_08095 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D CCHOA_03705 hypothetical protein K09009 K09009; uncharacterized protein
D CCHOA_11010 Yqey-like protein K09117 K09117; uncharacterized protein
D CCHOA_02660 hypothetical protein K09118 K09118; uncharacterized protein
D CCHOA_04000 hypothetical protein K09146 K09146; uncharacterized protein
D CCHOA_07010 YciI-like protein K09780 K09780; uncharacterized protein
D CCHOA_03920 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D CCHOA_05355 hypothetical protein K09791 K09791; uncharacterized protein
D CCHOA_07180 hypothetical protein K09861 K09861; uncharacterized protein
D CCHOA_00985 hypothetical protein K05937 K05937; uncharacterized protein
D CCHOA_07140 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024