+D GENES KO #

  KEGG Orthology (KO) - Corynebacterium comes

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ccoe00010] D CETAM_08860 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CETAM_03695 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CETAM_05640 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CETAM_04440 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_11935 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CETAM_07015 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CETAM_04040 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_07025 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_13710 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D CETAM_07020 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CETAM_01840 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CETAM_04175 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CETAM_08470 pyk1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_12565 pyk2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_05130 ppsA1; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10260 ppsA2; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10265 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_09300 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CETAM_08950 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_04615 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10420 adh3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00740 adhT; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_13040 adh4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_01005 adhC2; NADP-dependent alcohol dehydrogenase C 2 K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_12105 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_07625 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CETAM_09960 yeaD; Putative glucose-6-phosphate 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CETAM_12310 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ccoe00020] D CETAM_03590 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D CETAM_13250 citA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D CETAM_05265 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CETAM_06855 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CETAM_02885 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CETAM_05085 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_07740 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CETAM_07745 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CETAM_11170 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CETAM_01755 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CETAM_01760 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CETAM_01750 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CETAM_04355 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CETAM_08150 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CETAM_02985 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CETAM_12310 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CETAM_09300 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CETAM_08950 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ccoe00030] D CETAM_03695 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CETAM_06990 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CETAM_07000 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CETAM_06495 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CETAM_07075 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CETAM_06980 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CETAM_06985 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CETAM_10480 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CETAM_13725 xpkA; Xylulose-5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D CETAM_08350 deoC2; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CETAM_01785 deoC1; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CETAM_09940 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_04115 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CETAM_10740 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CETAM_00290 xylB1; Xylulose kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_11935 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CETAM_04440 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CETAM_05640 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:ccoe00040] D CETAM_10715 uxaC; Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D CETAM_10735 rspA; Starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D CETAM_10720 mtlK; Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D CETAM_10725 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D CETAM_12240 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CETAM_03855 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CETAM_07075 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CETAM_07340 xylB2; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:ccoe00051] D CETAM_03175 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CETAM_03165 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CETAM_08345 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CETAM_03145 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CETAM_05640 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CETAM_04440 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CETAM_07795 pfkB; 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_11935 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CETAM_07015 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CETAM_10480 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CETAM_07800 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:ccoe00052] D CETAM_09140 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CETAM_07680 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_09455 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_01670 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_03855 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_08860 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CETAM_12475 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CETAM_05640 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CETAM_05025 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] C 00053 Ascorbate and aldarate metabolism [PATH:ccoe00053] D CETAM_12240 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CETAM_10725 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:ccoe00500] D CETAM_05025 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CETAM_03855 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CETAM_06020 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CETAM_05035 glgC1; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CETAM_12040 glgC2; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CETAM_05520 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CETAM_08465 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CETAM_09835 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D CETAM_04295 Cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CETAM_09775 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CETAM_09840 mak; Maltokinase K16146 pep2; maltokinase [EC:2.7.1.175] D CETAM_05525 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CETAM_05030 glgA1; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CETAM_08565 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D CETAM_08585 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D CETAM_08620 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D CETAM_11440 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CETAM_11450 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_08860 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CETAM_03695 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ccoe00520] D CETAM_12265 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CETAM_11485 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CETAM_02555 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CETAM_02530 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CETAM_04120 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CETAM_11060 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CETAM_01805 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CETAM_09450 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D CETAM_08860 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CETAM_07625 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_03855 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CETAM_12240 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CETAM_09140 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CETAM_07680 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_09455 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_01670 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_12475 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CETAM_03695 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CETAM_03175 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CETAM_03165 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CETAM_08345 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CETAM_03145 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CETAM_05035 glgC1; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CETAM_12040 glgC2; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ccoe00620] D CETAM_09300 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CETAM_08950 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_06540 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CETAM_04615 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10420 adh3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00740 adhT; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_13040 adh4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_01005 adhC2; NADP-dependent alcohol dehydrogenase C 2 K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CETAM_11880 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CETAM_11885 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CETAM_08470 pyk1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_12565 pyk2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_02995 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CETAM_08415 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_12105 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CETAM_11170 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CETAM_07350 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CETAM_10185 baeB2; putative polyketide biosynthesis zinc-dependent hydrolase BaeB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CETAM_00155 baeB1; putative polyketide biosynthesis zinc-dependent hydrolase BaeB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CETAM_03600 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CETAM_02985 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CETAM_08150 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CETAM_04355 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CETAM_07010 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CETAM_12310 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CETAM_05130 ppsA1; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10260 ppsA2; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10265 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_04000 glcB; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01335 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ccoe00630] D CETAM_04005 aceA; Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D CETAM_04000 glcB; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CETAM_03590 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D CETAM_13250 citA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D CETAM_05265 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CETAM_06855 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_02995 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CETAM_03035 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CETAM_03040 accD2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CETAM_03030 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CETAM_09975 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] D CETAM_01375 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] D CETAM_09180 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CETAM_08995 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_09120 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00455 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_04275 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CETAM_08955 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CETAM_08960 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_08965 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CETAM_05985 hyi; Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D CETAM_08445 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CETAM_05085 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CETAM_10845 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:ccoe00640] D CETAM_11880 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CETAM_11885 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_06540 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_02995 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CETAM_03035 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CETAM_03040 accD2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CETAM_03030 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CETAM_07745 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CETAM_07740 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CETAM_02980 prpC2; 2-methylcitrate synthase 2 K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D CETAM_02970 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CETAM_02975 bcpA; Carboxyvinyl-carboxyphosphonate phosphorylmutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:ccoe00650] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10635 mmgB1; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_12940 mmgB2; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_13015 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_10640 echA4; putative enoyl-CoA hydratase echA8 K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_01755 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CETAM_01760 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CETAM_01750 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CETAM_03705 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_13025 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_00705 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_11170 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CETAM_06540 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CETAM_10205 scoA2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CETAM_01590 scoA1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CETAM_10200 scoB2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CETAM_01595 scoB1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CETAM_02715 acsA; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D CETAM_01585 bdhA1; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D CETAM_04740 adh2; NADP-dependent isopropanol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D CETAM_05720 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CETAM_05725 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ccoe00660] D CETAM_05720 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CETAM_05725 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CETAM_07745 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CETAM_07740 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CETAM_05895 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CETAM_05900 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CETAM_05800 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ccoe00562] D CETAM_07620 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CETAM_08500 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CETAM_12835 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CETAM_07470 pgsA1; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D CETAM_07015 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ccoe00190] D CETAM_06545 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CETAM_01755 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CETAM_01760 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CETAM_01750 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CETAM_08890 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CETAM_08885 petB; Cytochrome b6 K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D CETAM_08895 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D CETAM_06975 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CETAM_08905 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D CETAM_08900 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CETAM_10940 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CETAM_08910 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CETAM_06965 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CETAM_11130 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CETAM_11135 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CETAM_05475 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CETAM_05485 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CETAM_05480 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CETAM_05470 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CETAM_05490 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CETAM_05455 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CETAM_05465 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CETAM_05460 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CETAM_11660 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CETAM_03980 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CETAM_11690 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ccoe00710] D CETAM_07020 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CETAM_04040 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_07025 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_13710 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_11935 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CETAM_04440 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CETAM_06980 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CETAM_10480 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CETAM_07015 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CETAM_07075 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CETAM_06985 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CETAM_07010 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:ccoe00720] D CETAM_05130 ppsA1; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10260 ppsA2; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10265 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_07010 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CETAM_02985 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CETAM_04355 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CETAM_01755 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CETAM_01760 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CETAM_01750 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CETAM_07740 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CETAM_07745 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_02885 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CETAM_05265 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CETAM_06855 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CETAM_06730 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CETAM_02850 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CETAM_00115 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CETAM_11885 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CETAM_11880 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:ccoe00680] D CETAM_04275 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CETAM_04175 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CETAM_07010 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_11935 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CETAM_04440 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CETAM_05640 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CETAM_05160 Flavin-binding monooxygenase-like protein K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D CETAM_11880 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CETAM_11885 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CETAM_05130 ppsA1; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10260 ppsA2; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_10265 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CETAM_01840 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CETAM_05775 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CETAM_03585 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CETAM_10935 serB3; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ccoe00910] D CETAM_05365 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CETAM_05765 cmpC; Bicarbonate transport ATP-binding protein CmpC K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CETAM_05760 cmpB; Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein D CETAM_05755 cmpD; Bicarbonate transport ATP-binding protein CmpD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CETAM_05360 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05355 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05345 narX1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05395 aniA; Copper-containing nitrite reductase precursor K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D CETAM_04035 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CETAM_08440 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CETAM_08995 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_09120 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00455 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_01055 gltB1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CETAM_01060 gltB2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CETAM_11525 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ccoe00920] D CETAM_07310 NAD(P)H-dependent FAD/FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CETAM_12165 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CETAM_12170 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CETAM_03655 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CETAM_08060 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CETAM_12175 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CETAM_12185 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D CETAM_11165 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CETAM_03000 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_06350 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_12020 sseA3; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_11075 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CETAM_11070 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CETAM_02860 metX1; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CETAM_09150 metX2; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CETAM_10515 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ccoe00061] D CETAM_02995 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CETAM_09320 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein D CETAM_10810 kasB; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CETAM_01810 eryA; Erythronolide synthase, modules 1 and 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CETAM_04370 tsaC1; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_09590 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_10680 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_09770 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_01830 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ccoe00071] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_10630 mmgC; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_13010 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_09770 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_01830 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_04415 thcD3; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_10280 thcD4; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_00445 thcD1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_06565 andAa; Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_04615 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10420 adh3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00740 adhT; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_13040 adh4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ccoe00561] D CETAM_08445 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_01005 adhC2; NADP-dependent alcohol dehydrogenase C 2 K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CETAM_12485 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CETAM_06275 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D CETAM_08855 plsC1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CETAM_12435 fbpC3; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CETAM_06610 putative inactive lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CETAM_00755 lip; Lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:ccoe00564] D CETAM_05920 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CETAM_07325 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CETAM_08855 plsC1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CETAM_12560 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CETAM_08215 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CETAM_07960 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CETAM_11835 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:ccoe01040] D CETAM_03250 desA1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CETAM_03245 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D CETAM_07435 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ccoe00230] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_04115 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CETAM_11250 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CETAM_11330 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CETAM_03745 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CETAM_11905 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CETAM_11280 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CETAM_11290 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CETAM_11285 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CETAM_11245 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CETAM_03055 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CETAM_03060 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CETAM_11315 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CETAM_11320 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CETAM_03750 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CETAM_07390 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CETAM_07380 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CETAM_09325 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CETAM_08340 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CETAM_08730 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CETAM_05135 rihA1; Pyrimidine-specific ribonucleoside hydrolase RihA K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D CETAM_11150 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CETAM_11645 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CETAM_02675 guaB1; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CETAM_02685 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CETAM_10130 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CETAM_10850 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CETAM_02690 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CETAM_06865 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CETAM_06900 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CETAM_11555 guaB2; Inosine-5'-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7] D CETAM_07135 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CETAM_10950 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CETAM_02195 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CETAM_09650 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D CETAM_07385 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CETAM_01860 gppA1; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CETAM_04190 gppA2; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CETAM_01625 cyaB; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CETAM_11910 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CETAM_02925 Aminodeoxyfutalosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CETAM_00775 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CETAM_02420 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CETAM_07475 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CETAM_12165 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CETAM_12170 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CETAM_11955 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CETAM_11950 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CETAM_11945 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:ccoe00240] D CETAM_07150 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CETAM_07155 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CETAM_07165 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CETAM_07160 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CETAM_06785 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CETAM_12010 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CETAM_07145 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CETAM_08225 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CETAM_10130 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CETAM_03025 yceF; Maf-like protein YceF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CETAM_06310 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CETAM_06365 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CETAM_07380 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CETAM_09325 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CETAM_11150 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CETAM_02945 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CETAM_07170 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CETAM_08360 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CETAM_02195 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CETAM_12245 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CETAM_10950 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CETAM_03195 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CETAM_07605 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CETAM_08355 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D CETAM_03650 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CETAM_07995 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CETAM_07290 rutE; putative malonic semialdehyde reductase RutE K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ccoe00250] D CETAM_02600 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CETAM_00710 racX; putative amino-acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CETAM_08685 ansZ; L-asparaginase 2 precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CETAM_08915 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CETAM_12230 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CETAM_10525 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CETAM_06740 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CETAM_06235 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CETAM_06240 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CETAM_11910 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CETAM_11320 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CETAM_07165 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CETAM_03705 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_13025 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_00705 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_01055 gltB1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CETAM_01060 gltB2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CETAM_08440 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CETAM_12135 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CETAM_08995 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_09120 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00455 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_07150 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CETAM_07155 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CETAM_10705 glsA1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D CETAM_11285 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CETAM_02555 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CETAM_11250 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ccoe00260] D CETAM_01360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CETAM_01365 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CETAM_05315 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CETAM_05320 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CETAM_09085 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CETAM_04275 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CETAM_08445 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CETAM_01840 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CETAM_05775 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CETAM_03585 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CETAM_10935 serB3; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CETAM_00545 tdh1; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D CETAM_08955 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CETAM_08960 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_08965 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CETAM_10590 soxA; Monomeric sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D CETAM_07315 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CETAM_08625 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CETAM_07730 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CETAM_13135 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CETAM_11350 trpB1; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CETAM_13130 trpB2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ccoe00270] D CETAM_11075 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CETAM_11070 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CETAM_09830 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CETAM_08640 xecA1; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CETAM_00120 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CETAM_07120 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CETAM_12150 mtnN; Aminodeoxyfutalosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CETAM_08730 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CETAM_07330 mtnC; Enolase-phosphatase E1 K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D CETAM_07335 mtnD; Acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D CETAM_03190 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CETAM_01360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CETAM_01365 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CETAM_05315 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CETAM_02860 metX1; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CETAM_09150 metX2; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D CETAM_10515 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CETAM_02865 metZ; O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CETAM_08935 ilvE1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CETAM_03000 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_06350 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_12020 sseA3; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_10175 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CETAM_07315 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CETAM_05775 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CETAM_03585 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ccoe00280] D CETAM_08935 ilvE1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_02995 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CETAM_03035 accD1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CETAM_03040 accD2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CETAM_03030 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D CETAM_13020 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_10205 scoA2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CETAM_01590 scoA1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D CETAM_10200 scoB2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CETAM_01595 scoB1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D CETAM_02715 acsA; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ccoe00290] D CETAM_08625 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CETAM_05895 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CETAM_05900 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CETAM_05800 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CETAM_05720 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CETAM_05725 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CETAM_05730 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CETAM_03390 ilvD1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CETAM_05705 ilvD2; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CETAM_08935 ilvE1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CETAM_12230 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CETAM_01335 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ccoe00300] D CETAM_05315 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CETAM_01360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CETAM_01365 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CETAM_07990 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CETAM_08000 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CETAM_04975 dapD1; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CETAM_04985 dapD2; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CETAM_06220 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CETAM_03505 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CETAM_04990 dapE1; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CETAM_07845 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CETAM_05290 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CETAM_05885 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CETAM_11400 ddh; Meso-diaminopimelate D-dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D CETAM_08775 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CETAM_08770 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ccoe00310] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_10630 mmgC; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_13010 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_03705 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_13025 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_00705 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ccoe00220] D CETAM_06225 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CETAM_06235 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CETAM_06240 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CETAM_11955 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CETAM_11950 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CETAM_11945 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CETAM_10705 glsA1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D CETAM_11285 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CETAM_08995 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_09120 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00455 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_07150 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CETAM_07155 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CETAM_08440 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CETAM_12230 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CETAM_06210 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CETAM_11820 Acetyltransferase (GNAT) family protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D CETAM_06215 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CETAM_06205 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CETAM_06220 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:ccoe00330] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_12530 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CETAM_01870 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CETAM_12135 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CETAM_10105 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CETAM_10085 proA2; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:ccoe00340] D CETAM_06745 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CETAM_06750 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CETAM_08490 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CETAM_08505 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CETAM_08510 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CETAM_08495 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CETAM_08525 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CETAM_08530 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_01180 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_03405 hisN1; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D CETAM_08535 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:ccoe00350] D CETAM_08530 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_01180 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_04615 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10420 adh3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00740 adhT; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_13040 adh4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00340 nphA1; 4-nitrophenol 2-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D CETAM_03705 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_13025 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_00705 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_10240 xylB3; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CETAM_04060 nagI; Gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D CETAM_04050 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4] D CETAM_04055 Ureidoglycolate lyase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:ccoe00360] D CETAM_12885 paaK; Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D CETAM_12895 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CETAM_12900 paaA; 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D CETAM_12905 paaB; 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D CETAM_12910 paaC; 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D CETAM_12915 paaD; Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D CETAM_12920 paaE; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D CETAM_12950 paaZ; Bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_10635 mmgB1; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_12940 mmgB2; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_13015 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_08530 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_01180 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_10240 xylB3; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CETAM_12530 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CETAM_04415 thcD3; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_10280 thcD4; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_00445 thcD1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_06565 andAa; Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:ccoe00380] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_10630 mmgC; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_13010 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_12530 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CETAM_09975 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] D CETAM_01375 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ccoe00400] D CETAM_04255 aroG1; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CETAM_08835 aroG2; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CETAM_07225 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CETAM_07220 aroQ3; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CETAM_00510 aroQ1; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CETAM_00515 aroQ2; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CETAM_07230 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CETAM_03265 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CETAM_07235 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CETAM_13110 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CETAM_13115 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CETAM_13120 trpGD; Bifunctional protein TrpGD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CETAM_08505 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CETAM_08480 trpC1; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CETAM_13125 trpC2; Tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CETAM_13135 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CETAM_11350 trpB1; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CETAM_13130 trpB2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CETAM_03710 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CETAM_01215 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CETAM_12525 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D CETAM_08530 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_01180 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ccoe00410] D CETAM_02220 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_11600 panC2; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CETAM_00905 panC1; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00430 Taurine and hypotaurine metabolism [PATH:ccoe00430] D CETAM_10525 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CETAM_11885 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CETAM_11880 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:ccoe00450] D CETAM_10515 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CETAM_09830 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CETAM_08640 xecA1; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CETAM_00120 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CETAM_06925 csd2; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CETAM_06425 trxC1; Putative thioredoxin-2 K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CETAM_13305 trxB2; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CETAM_12165 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CETAM_12170 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CETAM_03915 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ccoe00460] D CETAM_06020 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CETAM_08685 ansZ; L-asparaginase 2 precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CETAM_04275 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ccoe00470] D CETAM_02580 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CETAM_05925 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CETAM_10705 glsA1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D CETAM_11285 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CETAM_10865 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3] D CETAM_08760 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CETAM_00710 racX; putative amino-acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CETAM_07730 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CETAM_07845 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CETAM_05290 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CETAM_05885 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:ccoe00480] D CETAM_03080 ybdK1; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CETAM_11800 ybdK3; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CETAM_08940 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CETAM_10490 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CETAM_02885 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CETAM_06495 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CETAM_06990 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CETAM_11300 gpx1; Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:ccoe00515] D CETAM_03900 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:ccoe00514] D CETAM_03900 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:ccoe00542] D CETAM_05445 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ccoe00541] D CETAM_03855 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CETAM_07680 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_09455 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_01670 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CETAM_12475 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CETAM_12240 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CETAM_01690 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CETAM_01700 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CETAM_01695 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D CETAM_03175 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CETAM_03165 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CETAM_08345 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CETAM_04120 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CETAM_09450 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:ccoe00550] D CETAM_11060 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CETAM_01805 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CETAM_08745 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CETAM_08760 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CETAM_08775 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CETAM_05925 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CETAM_08770 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CETAM_09705 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CETAM_06770 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CETAM_08765 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CETAM_08750 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CETAM_08780 pbpB2; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CETAM_00175 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D CETAM_11655 dac; D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CETAM_01325 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CETAM_01320 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:ccoe00552] D CETAM_06770 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CETAM_05445 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ccoe00543] D CETAM_05445 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CETAM_11075 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ccoe00730] D CETAM_06525 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D CETAM_05555 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CETAM_08295 hcnC; Hydrogen cyanide synthase subunit HcnC precursor K03153 thiO; glycine oxidase [EC:1.4.3.19] D CETAM_07590 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CETAM_08305 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CETAM_08290 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CETAM_05935 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CETAM_03260 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CETAM_02420 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ccoe00740] D CETAM_07060 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CETAM_07070 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CETAM_07055 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CETAM_07065 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CETAM_08035 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CETAM_07310 NAD(P)H-dependent FAD/FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] C 00750 Vitamin B6 metabolism [PATH:ccoe00750] D CETAM_09720 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CETAM_03585 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CETAM_09085 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CETAM_10365 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D CETAM_10370 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:ccoe00760] D CETAM_02600 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CETAM_04150 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CETAM_08545 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CETAM_10900 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CETAM_08340 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CETAM_07380 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CETAM_09325 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CETAM_10075 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CETAM_03340 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CETAM_10970 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CETAM_04900 pncC; Nicotinamide-nucleotide amidohydrolase PncC K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CETAM_07955 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CETAM_10745 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CETAM_00930 cobB2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CETAM_06290 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CETAM_03705 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_13025 gabD4; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CETAM_00705 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ccoe00770] D CETAM_05720 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CETAM_05725 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CETAM_05730 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CETAM_03390 ilvD1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CETAM_05705 ilvD2; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CETAM_00910 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CETAM_04840 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CETAM_11600 panC2; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CETAM_00905 panC1; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CETAM_04270 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CETAM_07125 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CETAM_05965 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CETAM_06055 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CETAM_10805 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CETAM_08935 ilvE1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CETAM_02220 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ccoe00780] D CETAM_04370 tsaC1; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_09590 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_10680 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_00655 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CETAM_03045 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ccoe00785] D CETAM_08970 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CETAM_08975 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CETAM_04810 lplA; putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_09300 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CETAM_08950 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CETAM_05085 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CETAM_08955 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CETAM_08960 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CETAM_08965 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ccoe00790] D CETAM_11635 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CETAM_12575 pld; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CETAM_11625 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CETAM_11620 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CETAM_05000 folP1; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CETAM_11630 folP2; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CETAM_03645 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CETAM_10160 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CETAM_07060 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CETAM_04280 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D CETAM_11230 ilvE2; putative branched-chain-amino-acid aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CETAM_02045 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D CETAM_05415 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CETAM_05405 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CETAM_01160 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CETAM_03860 moeA2; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CETAM_05410 moeA3; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CETAM_01170 moeA1; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:ccoe00670] D CETAM_03645 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CETAM_06730 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CETAM_02850 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CETAM_04275 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CETAM_03745 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CETAM_03750 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CETAM_07100 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CETAM_08960 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CETAM_03650 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CETAM_07995 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CETAM_10845 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CETAM_00115 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CETAM_03850 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ccoe00860] D CETAM_05840 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_01255 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_01895 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CETAM_01970 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CETAM_01920 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CETAM_01900 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CETAM_01955 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CETAM_04825 hemG; Protoporphyrinogen IX dehydrogenase [menaquinone] K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D CETAM_01960 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CETAM_06840 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CETAM_07570 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D CETAM_01910 cysG; Siroheme synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CETAM_08125 sumT; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CETAM_08370 albA; Antilisterial bacteriocin subtilosin biosynthesis protein AlbA K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D CETAM_06975 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CETAM_06965 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CETAM_12160 cbiX; Sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CETAM_06615 hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D CETAM_08930 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CETAM_09165 pspA3; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CETAM_04570 Magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D CETAM_10725 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D CETAM_13675 copA5; Copper resistance protein A precursor K22552 mmcO; multicopper oxidase [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ccoe00130] D CETAM_02080 ubiE1; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CETAM_05830 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] D CETAM_02065 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CETAM_02055 ykfB2; L-Ala-D/L-Glu epimerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CETAM_02030 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CETAM_02040 menB1; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CETAM_10660 menB2; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CETAM_02020 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ccoe00900] D CETAM_07590 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CETAM_08185 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CETAM_11495 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CETAM_03955 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CETAM_11490 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CETAM_08175 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CETAM_04460 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_09805 idi2; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CETAM_08815 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CETAM_00615 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CETAM_04260 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CETAM_09705 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:ccoe00903] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_13035 mlhB; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:ccoe00907] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CETAM_06980 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ccoe00523] D CETAM_01690 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CETAM_01700 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CETAM_01695 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:ccoe01054] D CETAM_00710 racX; putative amino-acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D CETAM_05830 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D CETAM_01700 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ccoe00946] D CETAM_06020 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ccoe00332] D CETAM_10105 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CETAM_10085 proA2; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ccoe00261] D CETAM_12165 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CETAM_12170 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CETAM_01360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CETAM_01365 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CETAM_07990 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CETAM_08000 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ccoe00521] D CETAM_08860 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CETAM_11005 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CETAM_12835 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CETAM_07620 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CETAM_08500 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CETAM_01690 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CETAM_01700 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CETAM_01695 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CETAM_08860 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ccoe00525] D CETAM_01690 rmlA1; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CETAM_01700 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ccoe00401] D CETAM_01215 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CETAM_08530 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_01180 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CETAM_13110 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CETAM_13115 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CETAM_04370 tsaC1; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_09590 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_10680 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:ccoe00998] D CETAM_09320 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein D CETAM_05880 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] C 00999 Biosynthesis of various plant secondary metabolites [PATH:ccoe00999] D CETAM_07120 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CETAM_06020 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D CETAM_05880 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ccoe00362] D CETAM_10385 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CETAM_10390 cbdB2; 2-halobenzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CETAM_10395 benC; Benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CETAM_10400 lvr; Levodione reductase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CETAM_09645 clcA4; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10380 clcA5; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_00480 clcA1; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10375 catB; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CETAM_05260 catC1; Muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D CETAM_10355 catC2; Muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D CETAM_10220 catD3; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CETAM_00265 npcC; Hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D CETAM_00260 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D CETAM_10320 pcaG1; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CETAM_13270 pcaG2; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CETAM_10325 pcaH1; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D CETAM_13275 pcaH2; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D CETAM_10315 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D CETAM_05905 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CETAM_10310 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CETAM_00310 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CETAM_04400 Cytochrome P450 144 K22553 CYP199A2; 4-methoxybenzoate monooxygenase (O-demethylating) [EC:1.14.99.15] D CETAM_04415 thcD3; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_10280 thcD4; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_00445 thcD1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_06565 andAa; Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CETAM_10275 thcC2; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S D CETAM_00450 thcC1; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S D CETAM_10305 pobA; p-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D CETAM_04075 3-hydroxybenzoate 6-hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24] D CETAM_10655 acrC; Acryloyl-CoA reductase (NADH) K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-] D CETAM_10625 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D CETAM_10650 fabG6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D CETAM_10630 mmgC; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_13010 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CETAM_10635 mmgB1; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_12940 mmgB2; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_13015 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:ccoe00627] D CETAM_12530 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D CETAM_08415 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CETAM_13220 pcpB2; Pentachlorophenol 4-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D CETAM_07705 tsaM1; Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1 K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D CETAM_07710 pobB2; Phenoxybenzoate dioxygenase subunit beta K03863 vanB; vanillate monooxygenase ferredoxin subunit D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:ccoe00364] D CETAM_10385 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CETAM_10390 cbdB2; 2-halobenzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CETAM_10395 benC; Benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CETAM_10400 lvr; Levodione reductase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CETAM_09645 clcA4; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10380 clcA5; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_00480 clcA1; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10375 catB; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CETAM_00260 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:ccoe00625] D CETAM_04615 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10420 adh3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00740 adhT; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_13040 adh4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10290 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CETAM_00360 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ccoe00361] D CETAM_09645 clcA4; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10380 clcA5; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_00480 clcA1; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_00260 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D CETAM_00265 npcC; Hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D CETAM_00270 tfdB; 2,4-dichlorophenol 6-monooxygenase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] D CETAM_10375 catB; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:ccoe00623] D CETAM_13220 pcpB2; Pentachlorophenol 4-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D CETAM_10240 xylB3; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CETAM_10235 yfmT; Putative aldehyde dehydrogenase YfmT K20199 pchA; 4-hydroxybenzaldehyde dehydrogenase (NADP+) [EC:1.2.1.96] D CETAM_09645 clcA4; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10380 clcA5; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_00480 clcA1; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CETAM_10375 catB; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CETAM_00260 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:ccoe00622] D CETAM_10240 xylB3; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CETAM_10385 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CETAM_10390 cbdB2; 2-halobenzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CETAM_10395 benC; Benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CETAM_10400 lvr; Levodione reductase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] C 00633 Nitrotoluene degradation [PATH:ccoe00633] D CETAM_04545 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:ccoe00643] D CETAM_12530 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation D CETAM_11955 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CETAM_11950 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CETAM_11945 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:ccoe00930] D CETAM_12195 pamO; Phenylacetone monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22] D CETAM_13030 Cyclohexanone 1,2-monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22] D CETAM_00300 Cyclohexanone 1,2-monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22] D CETAM_13035 mlhB; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D CETAM_03010 echA1; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:ccoe00626] D CETAM_04615 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_10420 adh3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_00740 adhT; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CETAM_13040 adh4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D CETAM_10320 pcaG1; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CETAM_13270 pcaG2; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CETAM_10325 pcaH1; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D CETAM_13275 pcaH2; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation D CETAM_13240 hsaA4; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ccoe03020] D CETAM_02175 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CETAM_02180 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CETAM_02455 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CETAM_07130 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CETAM_03515 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ccoe03010] D CETAM_06045 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CETAM_08235 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CETAM_02295 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CETAM_02450 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CETAM_02400 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CETAM_12810 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CETAM_02205 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CETAM_02385 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CETAM_02525 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CETAM_02260 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CETAM_02445 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CETAM_02200 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CETAM_02440 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CETAM_03795 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CETAM_08025 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CETAM_08365 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CETAM_02310 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CETAM_03790 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D CETAM_02285 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CETAM_10020 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CETAM_02130 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CETAM_02280 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CETAM_02265 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CETAM_02270 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CETAM_02360 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CETAM_02390 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CETAM_02165 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CETAM_12800 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CETAM_02160 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CETAM_02125 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CETAM_02520 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CETAM_02350 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CETAM_02410 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CETAM_02300 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CETAM_02460 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CETAM_02395 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CETAM_08285 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CETAM_06180 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CETAM_10120 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CETAM_02290 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CETAM_02275 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CETAM_02355 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CETAM_04085 ctc; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25 D CETAM_10115 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CETAM_03805 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CETAM_02305 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CETAM_02405 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CETAM_03810 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CETAM_03815 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CETAM_03800 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D CETAM_13355 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CETAM_06175 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CETAM_10965 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36 D CETAM_12740 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_12690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_11055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_06255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_03485 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_06260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_03490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_11050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12730 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_12680 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_11045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_06265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_03495 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ccoe00970] D CETAM_10985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_10990 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_00085 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_03875 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_05275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_10585 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_01210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_03630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_01190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_09410 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CETAM_11095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CETAM_11090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CETAM_07540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CETAM_04135 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CETAM_05855 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CETAM_11100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CETAM_05860 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CETAM_05865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CETAM_12250 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_07550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_07535 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_10435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_07525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_10605 tRNA-His K14226 tRNA-His; tRNA His D CETAM_00080 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CETAM_04200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_06025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_00200 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D CETAM_06800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_10830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_10700 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CETAM_11125 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CETAM_09405 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_03385 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_03395 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_02105 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_11085 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CETAM_10430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CETAM_01430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CETAM_06430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CETAM_01265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01235 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01635 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CETAM_11425 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CETAM_02100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CETAM_02110 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CETAM_02095 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CETAM_09290 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_07520 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_07530 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_07545 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_05840 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_01255 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_05615 gatA1; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CETAM_05655 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CETAM_05610 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CETAM_07260 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CETAM_07275 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CETAM_09685 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CETAM_07480 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CETAM_12500 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CETAM_11480 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CETAM_03915 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CETAM_07100 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CETAM_10165 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CETAM_13060 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CETAM_08705 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CETAM_11570 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CETAM_05285 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CETAM_08105 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CETAM_07345 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CETAM_06195 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CETAM_06200 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CETAM_06250 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CETAM_02910 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ccoe03060] D CETAM_02415 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CETAM_02115 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CETAM_07005 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CETAM_07405 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CETAM_07400 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CETAM_07410 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CETAM_12650 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_13340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_03225 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_06445 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_08375 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CETAM_01270 ffs; Bacterial small signal recognition particle RNA K01983 ffs; SRP RNA D CETAM_08395 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CETAM_06650 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA D CETAM_05055 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D CETAM_06645 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D CETAM_08275 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CETAM_08665 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ccoe04122] D CETAM_05555 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CETAM_03000 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_06350 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_12020 sseA3; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CETAM_05570 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CETAM_01160 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CETAM_05415 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CETAM_08310 moeZ2; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CETAM_01155 moeZ1; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D CETAM_05405 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CETAM_08300 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome D CETAM_06680 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:ccoe03018] D CETAM_10125 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D CETAM_04175 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CETAM_08020 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CETAM_05190 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CETAM_03925 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CETAM_05425 hypothetical protein K03628 rho; transcription termination factor Rho D CETAM_07985 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D CETAM_12125 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CETAM_02650 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_11705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_03980 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CETAM_11690 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CETAM_13195 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ccoe03030] D CETAM_05815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_08575 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01330 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_05595 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_08645 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CETAM_01285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CETAM_01630 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CETAM_10040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CETAM_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CETAM_12795 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CETAM_09525 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CETAM_10575 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12805 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_09165 pspA3; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CETAM_08270 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CETAM_06030 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CETAM_05600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ccoe03410] D CETAM_01480 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CETAM_05940 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CETAM_11530 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CETAM_00875 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CETAM_08420 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CETAM_12870 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CETAM_03665 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CETAM_03880 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CETAM_05645 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CETAM_02895 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CETAM_11830 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CETAM_06030 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CETAM_05600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ccoe03420] D CETAM_04145 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CETAM_06150 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CETAM_06095 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CETAM_07045 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CETAM_03330 uvrD1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_03345 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_03715 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_06030 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CETAM_05600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CETAM_03515 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:ccoe03430] D CETAM_03330 uvrD1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_03345 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_03715 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_04455 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CETAM_04450 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CETAM_10575 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12805 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_08645 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CETAM_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CETAM_01285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CETAM_10040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CETAM_01630 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CETAM_05815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_08575 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01330 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_05595 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_05600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ccoe03440] D CETAM_10575 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12805 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CETAM_09710 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CETAM_01300 recR; Recombination protein RecR K06187 recR; recombination protein RecR D CETAM_07905 recombinase A K03553 recA; recombination protein RecA D CETAM_06030 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CETAM_07420 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CETAM_07415 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CETAM_07425 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CETAM_05950 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CETAM_08645 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CETAM_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CETAM_01285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CETAM_10040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CETAM_01630 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CETAM_05815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_08575 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01330 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_05595 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_07115 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ccoe03250] D CETAM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ccoe02010] D CETAM_05765 cmpC; Bicarbonate transport ATP-binding protein CmpC K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CETAM_05760 cmpB; Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein D CETAM_05755 cmpD; Bicarbonate transport ATP-binding protein CmpD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CETAM_05340 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein D CETAM_05335 cysW; Sulfate transport system permease protein CysW K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CETAM_07940 fbpA3; Fe(3+)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CETAM_00585 fbpA1; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CETAM_07935 thiamine transporter membrane protein K02011 afuB; iron(III) transport system permease protein D CETAM_00580 ycjO; Inner membrane ABC transporter permease protein YcjO K02011 afuB; iron(III) transport system permease protein D CETAM_07930 fbpC1; Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CETAM_00575 sugC1; Trehalose import ATP-binding protein SugC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CETAM_12065 opuBC; Choline-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein D CETAM_12070 opuCB; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein D CETAM_12075 opuCD; Carnitine transport permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein D CETAM_12080 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CETAM_03120 sugC2; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CETAM_03115 putative ABC transporter-binding protein precursor K10236 thuE; trehalose/maltose transport system substrate-binding protein D CETAM_03110 sugA; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D CETAM_03105 sugB; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D CETAM_11205 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D CETAM_11540 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein D CETAM_11200 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D CETAM_11195 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CETAM_11190 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CETAM_09885 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein D CETAM_09875 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CETAM_09880 phnC; Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CETAM_07885 glnH2; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein D CETAM_07890 glnM; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein D CETAM_07895 glnP; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein D CETAM_07880 glnQ3; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CETAM_02815 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CETAM_02805 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein D CETAM_02810 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein D CETAM_04875 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D CETAM_04880 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D CETAM_04885 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CETAM_04890 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D CETAM_07915 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D CETAM_07925 ecfT2; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D CETAM_07920 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CETAM_04860 ecfT1; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CETAM_05145 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D CETAM_01135 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D CETAM_01130 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CETAM_02145 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein D CETAM_12970 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein D CETAM_12965 macB; Macrolide export ATP-binding/permease protein MacB K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CETAM_02150 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CETAM_03425 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CETAM_03420 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CETAM_12210 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CETAM_12215 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CETAM_11145 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CETAM_11140 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CETAM_08675 yjjK2; putative ABC transporter ATP-binding protein YjjK K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ccoe02060] D CETAM_07790 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CETAM_07805 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CETAM_06050 bglF; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CETAM_07800 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CETAM_07795 pfkB; 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:ccoe03070] D CETAM_07405 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CETAM_07400 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CETAM_02115 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CETAM_07005 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CETAM_02415 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CETAM_07410 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CETAM_12650 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_13340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_03225 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_06445 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_08395 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CETAM_08375 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CETAM_06650 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA D CETAM_05055 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D CETAM_06645 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:ccoe02020] D CETAM_12575 pld; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D CETAM_01845 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CETAM_01850 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CETAM_11205 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D CETAM_11540 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein D CETAM_06965 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CETAM_03825 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CETAM_03820 mprA2; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D CETAM_03830 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CETAM_03205 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CETAM_03200 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CETAM_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CETAM_03765 citE; Citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CETAM_03600 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CETAM_05360 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05355 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05345 narX1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05350 narX2; Nitrate reductase-like protein NarX K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CETAM_01525 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CETAM_01530 hypothetical protein K12510 tadB; tight adherence protein B D CETAM_08380 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CETAM_08385 glnK; Nitrogen regulatory protein P-II 2 K04751 glnB; nitrogen regulatory protein P-II 1 D CETAM_08995 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_09120 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00455 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00305 atoE; Short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_04425 siaT2; Sialic acid TRAP transporter permease protein SiaT K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CETAM_09565 fixL2; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D CETAM_01470 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CETAM_10705 glsA1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D CETAM_11130 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CETAM_11135 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CETAM_09185 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CETAM_09515 ptp; Low molecular weight protein-tyrosine-phosphatase ptp K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ccoe02024] D CETAM_13110 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CETAM_13115 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CETAM_04255 aroG1; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CETAM_08835 aroG2; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CETAM_04410 attM; N-acyl homoserine lactonase AttM K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D CETAM_09770 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_01830 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_01470 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CETAM_07070 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CETAM_10505 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CETAM_04875 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D CETAM_04880 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D CETAM_04885 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CETAM_04890 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D CETAM_06700 appA; Oligopeptide-binding protein AppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CETAM_07395 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CETAM_09900 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CETAM_06705 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D CETAM_09905 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D CETAM_06710 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CETAM_09910 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CETAM_06715 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CETAM_09915 gsiA3; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CETAM_12650 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_13340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_02115 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CETAM_07005 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CETAM_02415 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CETAM_07410 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CETAM_03225 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_06445 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_08395 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CETAM_08375 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D CETAM_07630 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CETAM_04175 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ccoe01501] D CETAM_12265 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CETAM_04875 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D CETAM_04880 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D CETAM_04885 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CETAM_04890 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D CETAM_08780 pbpB2; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ccoe01502] D CETAM_05925 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CETAM_02580 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CETAM_08770 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CETAM_08765 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CETAM_08750 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ccoe01503] D CETAM_13315 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CETAM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ccoe01000] C 01001 Protein kinases [BR:ccoe01001] D CETAM_11875 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D CETAM_08830 pknL; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CETAM_00165 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CETAM_00170 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CETAM_09520 ywqD; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D CETAM_01845 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CETAM_03825 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CETAM_03205 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CETAM_11355 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CETAM_02795 dcuS; Sensor histidine kinase DcuS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D CETAM_09565 fixL2; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ccoe01009] D CETAM_03190 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CETAM_00185 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CETAM_10935 serB3; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ccoe01002] D CETAM_08665 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CETAM_02690 guaA1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CETAM_06865 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CETAM_06900 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CETAM_00440 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D CETAM_08870 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CETAM_06845 ripA; Peptidoglycan endopeptidase RipA precursor K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CETAM_11250 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CETAM_01055 gltB1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CETAM_02555 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CETAM_08915 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CETAM_03945 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124] D CETAM_02330 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D CETAM_12645 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D CETAM_12535 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D CETAM_10490 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CETAM_09790 dcp; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CETAM_01030 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CETAM_08940 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CETAM_04990 dapE1; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CETAM_11755 dapE2; putative succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CETAM_02425 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CETAM_08165 map; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CETAM_11640 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CETAM_01040 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CETAM_03830 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CETAM_02490 Thermostable alkaline protease precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CETAM_01720 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CETAM_11310 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CETAM_11655 dac; D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CETAM_10410 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CETAM_10415 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CETAM_03365 lon; Lon protease K07177 K07177; Lon-like protease D CETAM_07780 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CETAM_08275 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CETAM_02050 putative peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21] C 01003 Glycosyltransferases [BR:ccoe01003] D CETAM_06595 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CETAM_03900 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D CETAM_07460 pimA; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CETAM_08865 pimB1; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D CETAM_02075 mgtA; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D CETAM_05030 glgA1; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CETAM_05445 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CETAM_08845 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CETAM_08820 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CETAM_06950 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CETAM_01065 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D CETAM_01070 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D CETAM_12440 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D CETAM_07560 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D CETAM_12280 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D CETAM_02475 hypothetical protein K22902 K22902; D-galactosaminyltransferase D CETAM_01115 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D CETAM_12455 glfT2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D CETAM_03140 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D CETAM_11440 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CETAM_05005 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ccoe01005] D CETAM_05445 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ccoe01011] D CETAM_11060 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CETAM_01805 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CETAM_08745 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CETAM_08760 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CETAM_08775 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CETAM_05925 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CETAM_02580 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CETAM_10865 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3] D CETAM_08765 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CETAM_08750 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CETAM_06770 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CETAM_13210 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D CETAM_08780 pbpB2; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CETAM_00175 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D CETAM_11655 dac; D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CETAM_08870 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CETAM_06845 ripA; Peptidoglycan endopeptidase RipA precursor K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CETAM_02330 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D CETAM_12645 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D CETAM_07250 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CETAM_13315 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ccoe01004] D CETAM_10810 kasB; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CETAM_01810 eryA; Erythronolide synthase, modules 1 and 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CETAM_04370 tsaC1; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_09590 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_10680 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CETAM_07435 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CETAM_03250 desA1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CETAM_12410 ppsA3; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13 D CETAM_02715 acsA; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D CETAM_09770 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_01830 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_12415 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32 D CETAM_08855 plsC1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ccoe01008] D CETAM_00710 racX; putative amino-acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:ccoe01006] D CETAM_08815 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CETAM_00615 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CETAM_04260 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CETAM_09705 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CETAM_07850 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CETAM_02020 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CETAM_06975 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CETAM_12445 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:ccoe01007] D CETAM_05840 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_01255 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_06250 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CETAM_02910 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CETAM_11480 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CETAM_05285 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CETAM_03915 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CETAM_08705 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CETAM_10165 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CETAM_13060 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CETAM_11570 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CETAM_07275 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CETAM_07345 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CETAM_09685 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CETAM_12500 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CETAM_08105 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CETAM_07480 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CETAM_07260 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CETAM_06195 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CETAM_06200 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CETAM_12230 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CETAM_03505 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CETAM_08530 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_01180 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CETAM_09830 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CETAM_06220 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CETAM_01970 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CETAM_08935 ilvE1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CETAM_03585 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:ccoe00199] D CETAM_04400 Cytochrome P450 144 K22553 CYP199A2; 4-methoxybenzoate monooxygenase (O-demethylating) [EC:1.14.99.15] C 00194 Photosynthesis proteins [BR:ccoe00194] D CETAM_05490 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CETAM_05485 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CETAM_05480 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CETAM_05475 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CETAM_05470 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CETAM_05465 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CETAM_05460 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CETAM_05455 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ccoe03000] D CETAM_07760 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CETAM_05680 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CETAM_12595 gltC; HTH-type transcriptional regulator GltC K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CETAM_07785 lacR; Lactose phosphotransferase system repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CETAM_09935 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CETAM_10710 cytR; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D CETAM_10495 yidP; putative HTH-type transcriptional regulator YidP K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D CETAM_12505 dasR; HTH-type transcriptional repressor DasR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D CETAM_04770 yvoA2; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator D CETAM_09895 yvoA3; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator D CETAM_00435 yvoA1; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator D CETAM_10360 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CETAM_06860 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D CETAM_11065 transcriptional regulator MalT K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D CETAM_10405 Putative HTH-type transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D CETAM_12110 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D CETAM_09695 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CETAM_10210 pcaR; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CETAM_01470 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CETAM_10910 fnr; Fumarate and nitrate reduction regulatory protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D CETAM_10345 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CETAM_10565 nmtR; HTH-type transcriptional regulator NmtR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CETAM_13485 cmtR2; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CETAM_13560 cmtR3; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CETAM_00315 cmtR1; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D CETAM_09690 smtB; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D CETAM_02965 Helix-turn-helix protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D CETAM_01745 anaerobic benzoate catabolism transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D CETAM_07950 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator D CETAM_07700 Transcriptional regulator PadR-like family protein K26740 vanR; PadR family transcriptional regulator, regulator of vanillate utilization D CETAM_07675 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D CETAM_13480 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CETAM_03045 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CETAM_05845 hypothetical protein K07727 K07727; putative transcriptional regulator D CETAM_12135 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CETAM_02655 whiB3; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CETAM_03150 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CETAM_03290 whiB4; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CETAM_00210 whiB1; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CETAM_01450 whiB2; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CETAM_11105 csoR2; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CETAM_13625 csoR3; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CETAM_13325 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CETAM_11500 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CETAM_06230 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CETAM_09750 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CETAM_07170 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CETAM_13190 hypothetical protein K07735 algH; putative transcriptional regulator D CETAM_07775 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D CETAM_08795 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ccoe03021] D CETAM_03515 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CETAM_02455 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CETAM_02175 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CETAM_02180 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CETAM_07130 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CETAM_07630 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor D CETAM_07670 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CETAM_02660 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CETAM_03280 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CETAM_01370 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CETAM_05045 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CETAM_08085 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D CETAM_07205 hypothetical protein K03625 nusB; transcription antitermination protein NusB D CETAM_02120 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D CETAM_04235 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CETAM_05425 hypothetical protein K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ccoe03019] D CETAM_10125 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D CETAM_08425 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CETAM_07985 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D CETAM_09530 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CETAM_10600 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CETAM_05190 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CETAM_03925 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CETAM_04175 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CETAM_08020 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CETAM_05425 hypothetical protein K03628 rho; transcription termination factor Rho D CETAM_12125 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CETAM_02650 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_11705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_03980 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CETAM_11690 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CETAM_13195 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CETAM_04010 rraA; Putative regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A D CETAM_07040 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D CETAM_06640 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D CETAM_07770 hrpB2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CETAM_00970 hrpB1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ccoe03011] D CETAM_06045 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CETAM_08235 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CETAM_02295 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CETAM_02450 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CETAM_02400 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CETAM_12810 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CETAM_02205 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CETAM_02385 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CETAM_02525 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CETAM_02260 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CETAM_02445 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CETAM_02200 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CETAM_02440 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CETAM_03795 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CETAM_08025 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CETAM_08365 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CETAM_02310 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CETAM_03790 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D CETAM_02285 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CETAM_10020 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CETAM_02130 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CETAM_02280 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CETAM_02265 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CETAM_02270 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CETAM_02360 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CETAM_02390 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CETAM_12800 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CETAM_02160 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CETAM_02125 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CETAM_02165 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CETAM_02520 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CETAM_02350 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CETAM_02410 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CETAM_02300 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CETAM_02460 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CETAM_02395 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CETAM_08285 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CETAM_06180 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CETAM_10120 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CETAM_02290 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CETAM_02275 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CETAM_02355 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CETAM_10115 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CETAM_03805 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CETAM_02305 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CETAM_02405 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CETAM_03810 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CETAM_03815 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CETAM_03800 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D CETAM_13355 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CETAM_06175 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CETAM_10965 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36 D CETAM_04085 ctc; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25 D CETAM_12730 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_12680 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_11045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_06265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_03495 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_12740 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_12690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_11055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_06255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_03485 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_06260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_03490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_11050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ccoe03009] D CETAM_08425 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CETAM_10600 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CETAM_09715 era2; GTPase Era K03595 era; GTPase D CETAM_10110 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D CETAM_08085 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D CETAM_07205 hypothetical protein K03625 nusB; transcription antitermination protein NusB D CETAM_02120 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D CETAM_03950 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CETAM_07095 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CETAM_05960 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CETAM_09740 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CETAM_13335 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CETAM_08790 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CETAM_03905 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CETAM_06285 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CETAM_05020 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CETAM_11475 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CETAM_08205 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CETAM_12670 rluA2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CETAM_04965 rluA1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CETAM_06360 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CETAM_08660 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CETAM_02630 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CETAM_08335 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CETAM_10125 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D CETAM_07255 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CETAM_05190 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CETAM_03260 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CETAM_06370 der; GTPase Der K03977 engA; GTPase D CETAM_07820 hflX; GTPase HflX K03665 hflX; GTPase D CETAM_05440 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CETAM_07385 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CETAM_08065 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CETAM_08090 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CETAM_00995 ribosome-associated protein K14761 rlbA; ribosome-associated protein D CETAM_10070 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D CETAM_09730 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D CETAM_04485 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D CETAM_08430 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ccoe03016] D CETAM_09530 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CETAM_05840 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_01255 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_08105 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CETAM_08705 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CETAM_13060 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CETAM_03915 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CETAM_05285 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CETAM_11570 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CETAM_07275 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CETAM_07260 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CETAM_09685 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CETAM_07480 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CETAM_12500 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CETAM_11480 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CETAM_10165 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CETAM_07345 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CETAM_06195 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CETAM_06200 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CETAM_06250 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CETAM_02910 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CETAM_07665 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CETAM_06685 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CETAM_12325 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CETAM_02470 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CETAM_08040 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CETAM_05555 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CETAM_05440 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CETAM_07850 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CETAM_03655 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CETAM_13350 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CETAM_09160 rnpA; Bacterial RNase P class A K01978 rnpB; M1 RNA D CETAM_10855 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CETAM_07580 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CETAM_09920 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CETAM_03275 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CETAM_01225 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CETAM_07875 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CETAM_08330 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CETAM_02845 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CETAM_06190 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CETAM_12670 rluA2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CETAM_04965 rluA1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CETAM_05570 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CETAM_11235 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CETAM_01245 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CETAM_11650 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CETAM_02625 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CETAM_02635 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CETAM_02585 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CETAM_08020 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ccoe03012] D CETAM_08075 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CETAM_06170 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CETAM_08230 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D CETAM_02215 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D CETAM_02210 fusA; Elongation factor G K02355 fusA; elongation factor G D CETAM_05430 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CETAM_08220 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor D CETAM_05435 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CETAM_04030 pth1; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CETAM_04080 pth2; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CETAM_02435 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CETAM_07210 efp; Elongation factor P K02356 efp; elongation factor P D CETAM_03415 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CETAM_04025 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ccoe03110] D CETAM_12045 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CETAM_11550 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CETAM_10195 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CETAM_12125 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CETAM_02650 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_11705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_09745 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CETAM_12115 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CETAM_12120 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D CETAM_08605 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D CETAM_02645 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D CETAM_11640 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CETAM_05455 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CETAM_07490 hypothetical protein K09796 pccA; periplasmic copper chaperone A D CETAM_02490 Thermostable alkaline protease precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CETAM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CETAM_07365 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CETAM_12760 trxC2; Putative thioredoxin-2 K03671 TXN; thioredoxin D CETAM_13310 Thioredoxin C-1 K03671 TXN; thioredoxin D CETAM_05515 trxA2; Thioredoxin K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:ccoe04131] D CETAM_10130 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_04040 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_07025 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_01840 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CETAM_08470 pyk1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_12565 pyk2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_11390 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:ccoe04121] D CETAM_06670 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:ccoe03051] D CETAM_06680 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase D CETAM_06665 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D CETAM_06660 hypothetical protein K13572 pafB; proteasome accessory factor B D CETAM_06655 hypothetical protein K13573 pafC; proteasome accessory factor C D CETAM_06675 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:ccoe03032] D CETAM_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CETAM_12795 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CETAM_09525 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CETAM_10575 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12805 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_08645 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CETAM_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CETAM_10040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CETAM_01630 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CETAM_05815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_08575 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01330 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_05595 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CETAM_09165 pspA3; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CETAM_08270 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CETAM_06030 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CETAM_05600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CETAM_00070 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CETAM_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CETAM_01570 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ccoe03036] D CETAM_08425 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_13450 lsr2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D CETAM_12615 lsr1; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D CETAM_00495 Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D CETAM_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CETAM_05680 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CETAM_08405 smc2; Chromosome partition protein Smc K03529 smc; chromosome segregation protein D CETAM_06340 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D CETAM_06355 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CETAM_03420 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CETAM_08780 pbpB2; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CETAM_07975 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CETAM_08740 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D CETAM_08755 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CETAM_03425 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CETAM_08735 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CETAM_13315 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CETAM_08720 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF D CETAM_06335 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CETAM_13330 soj3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CETAM_13325 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CETAM_13335 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CETAM_08245 xerD2; Tyrosine recombinase XerD K03733 xerC; integrase/recombinase XerC D CETAM_06320 xerD1; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CETAM_05060 minD; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D CETAM_00785 Adenosine monophosphate-protein transferase SoFic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CETAM_07030 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ccoe03400] D CETAM_03885 adaB; Methylated-DNA--protein-cysteine methyltransferase, inducible K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CETAM_00595 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CETAM_05940 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CETAM_00875 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CETAM_11530 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CETAM_01480 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CETAM_03515 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CETAM_05175 nudG; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CETAM_11860 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CETAM_07605 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CETAM_00975 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CETAM_05645 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CETAM_03880 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CETAM_08420 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CETAM_12870 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CETAM_03665 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CETAM_02895 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CETAM_11830 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CETAM_05600 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CETAM_06030 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CETAM_06150 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D CETAM_06095 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D CETAM_07045 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D CETAM_03330 uvrD1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_03345 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_03715 uvrD3; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CETAM_02175 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CETAM_02180 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CETAM_02455 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CETAM_07130 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CETAM_04145 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CETAM_04455 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CETAM_04450 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CETAM_08645 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CETAM_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CETAM_10040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CETAM_01630 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CETAM_05815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_08575 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01330 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_05595 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CETAM_01285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CETAM_10575 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12805 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_07905 recombinase A K03553 recA; recombination protein RecA D CETAM_07420 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CETAM_07415 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CETAM_07425 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CETAM_07115 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CETAM_11510 hypothetical protein K04485 radA; DNA repair protein RadA/Sms D CETAM_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CETAM_05950 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CETAM_09710 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CETAM_01300 recR; Recombination protein RecR K06187 recR; recombination protein RecR D CETAM_06295 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CETAM_00070 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CETAM_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CETAM_01570 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CETAM_03925 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CETAM_08695 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CETAM_07780 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CETAM_02765 DNA polymerase IV K14161 imuB; protein ImuB D CETAM_02820 dnaE1; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D CETAM_07900 recX; Regulatory protein RecX K03565 recX; regulatory protein D CETAM_10905 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CETAM_03660 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CETAM_05915 mutT1; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CETAM_06315 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CETAM_10950 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CETAM_08060 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ccoe03029] D CETAM_08075 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CETAM_06170 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CETAM_08230 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D CETAM_02215 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D CETAM_02210 fusA; Elongation factor G K02355 fusA; elongation factor G D CETAM_09715 era2; GTPase Era K03595 era; GTPase D CETAM_06250 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CETAM_13060 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CETAM_07275 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CETAM_09685 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CETAM_05285 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CETAM_05615 gatA1; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CETAM_05655 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CETAM_05610 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CETAM_10575 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12805 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CETAM_12125 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CETAM_12120 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D CETAM_02650 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_11705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_02645 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D CETAM_09745 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CETAM_12115 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CETAM_05555 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CETAM_05060 minD; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D CETAM_06975 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CETAM_06965 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CETAM_12650 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_13340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ccoe02000] D CETAM_12210 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CETAM_12215 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CETAM_05090 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CETAM_09825 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CETAM_11145 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CETAM_11140 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CETAM_08280 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D CETAM_08675 yjjK2; putative ABC transporter ATP-binding protein YjjK K18230 tylC; macrolide transport system ATP-binding/permease protein D CETAM_03965 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CETAM_05340 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein D CETAM_05335 cysW; Sulfate transport system permease protein CysW K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CETAM_05765 cmpC; Bicarbonate transport ATP-binding protein CmpC K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CETAM_05760 cmpB; Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein D CETAM_05755 cmpD; Bicarbonate transport ATP-binding protein CmpD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CETAM_07940 fbpA3; Fe(3+)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CETAM_00585 fbpA1; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D CETAM_07935 thiamine transporter membrane protein K02011 afuB; iron(III) transport system permease protein D CETAM_00580 ycjO; Inner membrane ABC transporter permease protein YcjO K02011 afuB; iron(III) transport system permease protein D CETAM_07930 fbpC1; Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CETAM_00575 sugC1; Trehalose import ATP-binding protein SugC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CETAM_12065 opuBC; Choline-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein D CETAM_12070 opuCB; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein D CETAM_12075 opuCD; Carnitine transport permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein D CETAM_12080 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CETAM_03120 sugC2; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CETAM_03115 putative ABC transporter-binding protein precursor K10236 thuE; trehalose/maltose transport system substrate-binding protein D CETAM_03110 sugA; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D CETAM_03105 sugB; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D CETAM_11205 pstS1; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D CETAM_11540 pstS2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein D CETAM_11200 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D CETAM_11195 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D CETAM_11190 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CETAM_09885 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein D CETAM_09875 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CETAM_09880 phnC; Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CETAM_07885 glnH2; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein D CETAM_07890 glnM; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein D CETAM_07895 glnP; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein D CETAM_07880 glnQ3; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CETAM_02815 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D CETAM_02805 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein D CETAM_02810 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein D CETAM_06405 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D CETAM_06410 Branched-chain amino acid transport system / permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D CETAM_06415 glnQ2; Glutamine transport ATP-binding protein GlnQ K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D CETAM_06005 glnH1; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CETAM_11870 glnH3; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CETAM_06000 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D CETAM_05995 glnQ1; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CETAM_04875 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D CETAM_04880 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D CETAM_04885 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CETAM_04890 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D CETAM_06700 appA; Oligopeptide-binding protein AppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CETAM_07395 Bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CETAM_09900 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CETAM_06705 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D CETAM_09905 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D CETAM_06710 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CETAM_09910 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CETAM_06715 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CETAM_09915 gsiA3; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D CETAM_03470 feuC; Iron-uptake system permease protein FeuC K25283 yclO; iron-siderophore transport system permease protein D CETAM_03465 hmuU1; Hemin transport system permease protein HmuU K25284 yclN; iron-siderophore transport system permease protein D CETAM_03475 fhuC1; Iron(3+)-hydroxamate import ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D CETAM_03460 yclQ; putative ABC transporter solute-binding protein YclQ precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CETAM_11985 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CETAM_11990 hmuU2; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein D CETAM_05530 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CETAM_11980 fhuC3; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CETAM_09020 fhuC2; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CETAM_07915 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D CETAM_07925 ecfT2; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D CETAM_07920 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CETAM_05140 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D CETAM_04860 ecfT1; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CETAM_05145 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D CETAM_04855 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CETAM_04850 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein D CETAM_09030 troA; Periplasmic zinc-binding protein TroA precursor K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CETAM_01135 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D CETAM_01130 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CETAM_02145 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein D CETAM_12970 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein D CETAM_12965 macB; Macrolide export ATP-binding/permease protein MacB K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CETAM_02150 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CETAM_08145 ABC-2 family transporter protein K25149 narB; polyether ionophore transport system permease protein D CETAM_11120 hypothetical protein K25149 narB; polyether ionophore transport system permease protein D CETAM_13150 ABC-2 family transporter protein K25149 narB; polyether ionophore transport system permease protein D CETAM_08140 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25150 narA; polyether ionophore transport system ATP-binding protein D CETAM_11115 drrA4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25150 narA; polyether ionophore transport system ATP-binding protein D CETAM_13145 drrA5; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25150 narA; polyether ionophore transport system ATP-binding protein D CETAM_03425 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CETAM_03420 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CETAM_05580 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D CETAM_06960 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CETAM_08195 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CETAM_11850 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CETAM_05585 ybhF; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CETAM_06955 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CETAM_08200 drrA3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CETAM_11855 yxlF; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CETAM_03500 ytrF1; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein D CETAM_03725 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D CETAM_04805 ytrF2; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein D CETAM_11035 ytrF3; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein D CETAM_03730 yxdL; ABC transporter ATP-binding protein YxdL K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CETAM_11040 bceA; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CETAM_06930 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CETAM_13170 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CETAM_00205 sdcS1; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CETAM_01205 sdcS2; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CETAM_11545 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CETAM_11845 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CETAM_08055 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump D CETAM_13295 proP; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CETAM_04300 pcaK3; 4-hydroxybenzoate transporter PcaK K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CETAM_04305 pcaK4; 4-hydroxybenzoate transporter PcaK K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CETAM_10300 pcaK6; 4-hydroxybenzoate transporter PcaK K05548 benK; MFS transporter, AAHS family, benzoate transport protein D CETAM_10350 pcaK7; 4-hydroxybenzoate transporter PcaK K26744 vanK; MFS transporter, AAHS family, vanillate permease D CETAM_07715 pcaK5; 4-hydroxybenzoate transporter PcaK K26744 vanK; MFS transporter, AAHS family, vanillate permease D CETAM_13215 pcaK8; 4-hydroxybenzoate transporter PcaK K26744 vanK; MFS transporter, AAHS family, vanillate permease D CETAM_02710 pcaK1; 4-hydroxybenzoate transporter PcaK K26744 vanK; MFS transporter, AAHS family, vanillate permease D CETAM_04070 pcaK2; 4-hydroxybenzoate transporter PcaK K26749 genK; MFS transporter, AAHS family, 2,5-dihydroxybenzoate transporter D CETAM_03920 yycB; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CETAM_05365 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CETAM_08120 bcr2; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CETAM_11840 bcr3; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CETAM_02890 ydhP; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CETAM_11380 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CETAM_02370 norB1; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D CETAM_11895 norB2; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D CETAM_11420 hsrA; putative transport protein HsrA K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CETAM_11560 emrY; putative multidrug resistance protein EmrY K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CETAM_12025 Major Facilitator Superfamily protein K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D CETAM_12600 ynfM; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CETAM_11390 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family D CETAM_12780 naiP; Putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CETAM_07790 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CETAM_07805 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CETAM_06050 bglF; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CETAM_07800 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CETAM_03450 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin Z D CETAM_03335 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel D CETAM_08390 amt; Ammonia channel precursor K03320 amt; ammonium transporter, Amt family D CETAM_03840 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D CETAM_05715 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel D CETAM_01200 Magnesium transporter MgtE K06213 mgtE; magnesium transporter D CETAM_06510 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter D CETAM_04210 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_04215 tlyC1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_04815 tlyC2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_06480 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_06485 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_09725 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_10730 uidB; Glucuronide carrier protein K16139 uidB; glucuronide carrier protein D CETAM_04980 gabP; GABA permease K16237 aroP; aromatic amino acid permease D CETAM_04155 arcD; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CETAM_00100 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CETAM_04820 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CETAM_05745 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CETAM_12335 ydfJ3; Membrane protein YdfJ K20470 mmpL3; trehalose monomycolate/heme transporter D CETAM_01965 sugE; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D CETAM_08700 rhtA; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA D CETAM_08650 EamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD D CETAM_10505 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CETAM_07725 dsdX; DsdX permease K13629 dsdX; D-serine transporter D CETAM_00550 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D CETAM_06735 dcuA; Anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CETAM_02380 betT; High-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein D CETAM_05215 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter D CETAM_03615 actP1; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter D CETAM_12050 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family D CETAM_07515 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein D CETAM_07510 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein D CETAM_03565 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease D CETAM_12620 ydcO; Inner membrane protein YdcO K05782 benE; benzoate membrane transport protein D CETAM_04830 clcA2; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D CETAM_07735 clcA3; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D CETAM_10530 srpC; putative chromate transport protein K07240 chrA; chromate transporter D CETAM_02780 bicA; Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family D CETAM_04515 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D CETAM_13475 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein D CETAM_04425 siaT2; Sialic acid TRAP transporter permease protein SiaT K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CETAM_03480 hypothetical protein K03325 ACR3; arsenite transporter D CETAM_10560 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter D CETAM_13530 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter D CETAM_11765 mrpA2; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CETAM_01415 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CETAM_11770 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CETAM_01410 mnhC1; Na(+)/H(+) antiporter subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CETAM_11775 mrpD2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CETAM_01405 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CETAM_11780 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CETAM_01400 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CETAM_11785 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CETAM_01395 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CETAM_11790 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CETAM_01390 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CETAM_13210 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D CETAM_02015 Membrane transport protein K13936 mdcF; malonate transporter and related proteins D CETAM_09860 putative transporter YfdV K13936 mdcF; malonate transporter and related proteins D CETAM_05735 potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D CETAM_05675 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D CETAM_10030 rhtC2; Threonine efflux protein K05835 rhtC; threonine efflux protein D CETAM_00990 rhtC1; Threonine efflux protein K05835 rhtC; threonine efflux protein D CETAM_13185 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump D CETAM_13180 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump D CETAM_01250 yhhQ; Inner membrane protein YhhQ K09125 yhhQ; queuosine precursor transporter D CETAM_09035 VIT family protein K22736 VIT; vacuolar iron transporter family protein D CETAM_09700 VIT family protein K22736 VIT; vacuolar iron transporter family protein D CETAM_13590 VIT family protein K22736 VIT; vacuolar iron transporter family protein D CETAM_08755 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D CETAM_01985 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D CETAM_13665 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D CETAM_05360 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05355 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CETAM_05345 narX1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CETAM_09520 ywqD; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D CETAM_12340 hypothetical protein K20468 K20468; putative heme transporter D CETAM_00280 TspO/MBR family protein K05770 TSPO; translocator protein D CETAM_07495 hypothetical protein K07156 copC; copper resistance protein C D CETAM_13565 hypothetical protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:ccoe02044] D CETAM_01525 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CETAM_01530 hypothetical protein K12510 tadB; tight adherence protein B D CETAM_08715 YGGT family protein K02221 yggT; YggT family protein D CETAM_10055 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA D CETAM_10050 ComEC family competence protein K02238 comEC; competence protein ComEC D CETAM_02500 eccCa1; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC D CETAM_02495 hypothetical protein K27087 eccD; ESX secretion system protein EccD D CETAM_02490 Thermostable alkaline protease precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CETAM_02515 esxA; 6 kDa early secretory antigenic target K14956 esx; ESAT-6 family protein D CETAM_02510 WXG domain conatining protein K14956 esx; ESAT-6 family protein D CETAM_03225 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_06445 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CETAM_07405 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CETAM_02115 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CETAM_07400 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CETAM_07005 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CETAM_02415 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CETAM_08375 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CETAM_08395 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CETAM_07410 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CETAM_12650 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_13340 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CETAM_06650 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA D CETAM_05055 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D CETAM_06645 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ccoe02042] D CETAM_04210 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_04215 tlyC1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_04815 tlyC2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_06480 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_06485 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_09725 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D CETAM_11275 hemeolysin-III related K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ccoe02022] D CETAM_01845 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CETAM_01850 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CETAM_03825 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CETAM_03820 mprA2; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D CETAM_03205 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CETAM_03200 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CETAM_11355 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CETAM_11360 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator D CETAM_02795 dcuS; Sensor histidine kinase DcuS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D CETAM_09565 fixL2; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:ccoe02035] D CETAM_01525 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ccoe04812] D CETAM_08735 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CETAM_06335 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CETAM_13330 soj3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CETAM_13325 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ccoe04147] D CETAM_13715 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CETAM_04175 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CETAM_04040 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_07025 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CETAM_07020 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CETAM_08470 pyk1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_12565 pyk2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CETAM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CETAM_02650 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_11705 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CETAM_12125 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CETAM_03695 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CETAM_02675 guaB1; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CETAM_02685 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CETAM_02215 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D CETAM_13170 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CETAM_09770 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_01830 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CETAM_11545 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CETAM_11845 Na+/Pi-cotransporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D CETAM_10215 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_10670 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_01600 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CETAM_03190 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CETAM_02420 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CETAM_07390 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CETAM_06240 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CETAM_06235 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CETAM_09140 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CETAM_05520 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CETAM_12485 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CETAM_08995 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_09120 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_00455 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CETAM_01920 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CETAM_02045 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D CETAM_05775 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CETAM_03750 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CETAM_01735 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CETAM_05550 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CETAM_06990 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CETAM_07015 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CETAM_01840 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CETAM_00605 blc; Outer membrane lipoprotein Blc precursor K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ccoe02048] D CETAM_05375 dpnA; Modification methylase DpnIIB K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CETAM_08735 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CETAM_05840 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_01255 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CETAM_05555 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ccoe01504] D CETAM_08675 yjjK2; putative ABC transporter ATP-binding protein YjjK K18230 tylC; macrolide transport system ATP-binding/permease protein D CETAM_12025 Major Facilitator Superfamily protein K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D CETAM_11380 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CETAM_02370 norB1; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D CETAM_11895 norB2; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ccoe03100] D CETAM_10985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_10990 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_00085 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_03875 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CETAM_05275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_10585 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_01210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_03630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_01190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CETAM_09410 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CETAM_11095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CETAM_11090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CETAM_07540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CETAM_04135 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CETAM_05855 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CETAM_11100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CETAM_05860 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CETAM_05865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CETAM_12250 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_07550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_07535 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_10435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_07525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CETAM_10605 tRNA-His K14226 tRNA-His; tRNA His D CETAM_00080 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CETAM_04200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_06025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_00200 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D CETAM_06800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_10830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CETAM_10700 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CETAM_11125 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CETAM_09405 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_03385 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_03395 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_02105 tRNA-Met K14230 tRNA-Met; tRNA Met D CETAM_11085 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CETAM_10430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CETAM_01430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CETAM_06430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CETAM_01265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01235 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CETAM_01635 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CETAM_11425 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CETAM_02100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CETAM_02110 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CETAM_02095 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CETAM_09290 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_07520 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_07530 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_07545 tRNA-Val K14237 tRNA-Val; tRNA Val D CETAM_12740 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_12690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_11055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_06255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_03485 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CETAM_06260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_03490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12685 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_11050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CETAM_12730 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_12680 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_11045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_06265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_03495 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CETAM_01270 ffs; Bacterial small signal recognition particle RNA K01983 ffs; SRP RNA D CETAM_09160 rnpA; Bacterial RNase P class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CETAM_01660 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D CETAM_01075 phbB; Acetoacetyl-CoA reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D CETAM_10445 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CETAM_03605 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CETAM_05665 gpr1; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CETAM_04645 yliI; Soluble aldose sugar dehydrogenase YliI precursor K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D CETAM_01080 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CETAM_02085 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D CETAM_05660 NADP oxidoreductase coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D CETAM_02960 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CETAM_06970 qorA; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CETAM_08160 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D CETAM_12585 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CETAM_07565 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CETAM_05690 yqjG; Glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CETAM_07485 efeN; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D CETAM_10775 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CETAM_07360 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CETAM_07750 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CETAM_07755 Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CETAM_10140 yhhW2; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CETAM_00945 yhhW1; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CETAM_06695 putative dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D CETAM_11590 hmp2; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CETAM_09570 hsaA3; Flavin-dependent monooxygenase, oxygenase subunit HsaA K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235] D CETAM_03700 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D CETAM_13520 merA; Mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CETAM_00760 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CETAM_11890 fprA1; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CETAM_12190 fprA2; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CETAM_04910 arsC1; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CETAM_03640 mrx1; Mycoredoxin 1 K18917 mrx1; mycoredoxin [EC:1.20.4.3] D CETAM_10545 arsC2; Arsenate-mycothiol transferase ArsC1 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CETAM_10550 arsC3; Arsenate-mycothiol transferase ArsC2 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CETAM_12470 arsC5; Arsenate-mycothiol transferase ArsC1 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CETAM_06530 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CETAM_02190 pyrroloquinoline quinone biosynthesis protein PqqE K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CETAM_04690 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CETAM_06550 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CETAM_11210 mshD2; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D CETAM_06600 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CETAM_00865 hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CETAM_12285 oatA2; O-acetyltransferase OatA K27307 tmaT; acetyltransferase [EC:2.3.1.-] D CETAM_03550 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D CETAM_01835 mshA1; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CETAM_08475 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CETAM_00640 prenyltransferase K23155 crtEb; lycopene elongase/hydratase (flavuxanthin-forming) [EC:2.5.1.149] D CETAM_05945 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CETAM_09115 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CETAM_11515 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D CETAM_08130 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CETAM_10555 arsC4; Arsenate-mycothiol transferase ArsC1 K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D CETAM_04785 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D CETAM_05105 pnbA; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CETAM_09795 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CETAM_12420 Cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D CETAM_10540 fadM; Long-chain acyl-CoA thioesterase FadM K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CETAM_13260 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CETAM_10065 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D CETAM_10760 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CETAM_03935 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CETAM_05500 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D CETAM_11410 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D CETAM_05115 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D CETAM_07105 def1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CETAM_11815 def2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CETAM_04945 mshB2; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D CETAM_04245 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D CETAM_12090 2-oxoglutaramate amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CETAM_12875 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CETAM_13245 lcfB2; Long-chain-fatty-acid--CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D CETAM_06765 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D CETAM_12405 accD3; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] D CETAM_01945 copB1; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CETAM_13700 copB2; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D CETAM_03685 cadA1; putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D CETAM_13545 cadA2; putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D CETAM_13555 zosA3; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] D CETAM_00320 zosA1; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CETAM_04665 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D CETAM_02565 suaB1; Ferredoxin-1 K05337 fer; ferredoxin D CETAM_06920 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins D CETAM_05545 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D CETAM_10595 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D CETAM_10955 ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CETAM_08725 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CETAM_03535 rpfA; Resuscitation-promoting factor RpfA precursor K21687 rpfA; resuscitation-promoting factor RpfA D CETAM_03940 rpf2; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB D CETAM_01680 Undecaprenyl-phosphate mannosyltransferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase C 99987 Cofactor metabolism C 99988 Secondary metabolism D CETAM_05835 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase D CETAM_11470 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase D CETAM_06395 Esterase PHB depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D CETAM_02035 catD1; Putative oxidoreductase CatD K15977 K15977; putative oxidoreductase D CETAM_03890 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase D CETAM_05695 DoxX K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CETAM_03540 cspA4; Major cold shock protein CspA K03704 cspA; cold shock protein D CETAM_00235 cspA1; putative cold shock protein A K03704 cspA; cold shock protein D CETAM_00500 cspA2; putative cold shock protein A K03704 cspA; cold shock protein D CETAM_01560 cspA3; putative cold shock protein A K03704 cspA; cold shock protein D CETAM_08315 hypothetical protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CETAM_10890 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CETAM_10425 tig; Trigger factor K03545 tig; trigger factor D CETAM_11960 ureE; Urease accessory protein UreE K03187 ureE; urease accessory protein D CETAM_11965 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein D CETAM_11970 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein D CETAM_11975 ureD1; Urease accessory protein UreD K03190 ureD; urease accessory protein D CETAM_03440 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D CETAM_10960 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D CETAM_08255 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein D CETAM_01990 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein D CETAM_13660 ccs2; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D CETAM_08260 hypothetical protein K07460 yraN; putative endonuclease D CETAM_06725 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease D CETAM_08250 hypothetical protein K04096 smf; DNA processing protein D CETAM_07265 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase D CETAM_09260 hypothetical protein K06919 K06919; putative DNA primase/helicase D CETAM_04575 Transposase IS66 family protein K18320 IS15; transposase, IS6 family D CETAM_04585 Integrase core domain protein K18320 IS15; transposase, IS6 family D CETAM_10025 Integrase core domain protein K07482 K07482; transposase, IS30 family D CETAM_12700 Transposase K07483 K07483; transposase D CETAM_01575 carbohydrate diacid transcriptional activator CdaR K07494 K07494; putative transposase D CETAM_08070 Calcineurin-like phosphoesterase K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D CETAM_07945 PspA/IM30 family protein K03969 pspA; phage shock protein A D CETAM_01290 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CETAM_05185 proY; Proline-specific permease ProY K03293 TC.AAT; amino acid transporter, AAT family D CETAM_02790 citN; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CETAM_04480 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CETAM_11010 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CETAM_09950 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CETAM_02615 aspT1; Aspartate/alanine antiporter K07085 K07085; putative transport protein D CETAM_08985 aspT2; Aspartate/alanine antiporter K07085 K07085; putative transport protein C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CETAM_02875 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein D CETAM_04930 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D CETAM_06885 hypothetical protein K07166 K07166; ACT domain-containing protein D CETAM_09735 ybeZ2; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CETAM_04325 ybeZ1; PhoH-like protein K07175 phoH2; PhoH-like ATPase D CETAM_05810 kdsD; Arabinose 5-phosphate isomerase KdsD K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D CETAM_05560 acm; Lysozyme M1 precursor K07273 acm; lysozyme D CETAM_01675 hypothetical protein K09153 K09153; small membrane protein C 99994 Others D CETAM_11180 hypothetical protein K02039 phoU; phosphate transport system protein D CETAM_00900 czcO1; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D CETAM_01555 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein D CETAM_10295 Putative HTH-type transcriptional regulator K06886 glbN; hemoglobin D CETAM_10520 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin D CETAM_04675 ydgH1; Putative membrane protein YdgH K06994 K06994; putative drug exporter of the RND superfamily D CETAM_07500 ydfJ2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D CETAM_08100 ydgH2; Putative membrane protein YdgH K06994 K06994; putative drug exporter of the RND superfamily D CETAM_01240 ydfJ1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D CETAM_12580 Phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D CETAM_00880 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D CETAM_06940 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CETAM_06935 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CETAM_04760 hypothetical protein K07048 PTER; phosphotriesterase-related protein D CETAM_04765 hypothetical protein K07048 PTER; phosphotriesterase-related protein D CETAM_02915 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein D CETAM_01010 Ribonuclease BN-like family protein K07058 K07058; membrane protein D CETAM_12635 hypothetical protein K07146 K07146; UPF0176 protein D CETAM_12855 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D CETAM_11825 hypothetical protein K04750 phnB; PhnB protein D CETAM_01565 hypothetical protein K03975 dedA; membrane-associated protein D CETAM_00420 yidH; Inner membrane protein YidH K00389 yidH; putative membrane protein D CETAM_01175 Membrane protein of unknown function K08972 K08972; putative membrane protein D CETAM_06010 hypothetical protein K08974 K08974; putative membrane protein D CETAM_02835 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein D CETAM_12145 hypothetical protein K08982 K08982; putative membrane protein D CETAM_13540 hypothetical protein K08982 K08982; putative membrane protein D CETAM_04620 hypothetical protein K08987 K08987; putative membrane protein D CETAM_06435 hypothetical protein K09858 K09858; SEC-C motif domain protein D CETAM_09050 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D CETAM_12330 hypothetical protein K06860 K06860; putative heme uptake system protein D CETAM_09765 hypothetical protein K06867 K06867; uncharacterized protein D CETAM_10035 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein D CETAM_02365 hypothetical protein K06975 K06975; uncharacterized protein D CETAM_10145 hypothetical protein K06975 K06975; uncharacterized protein D CETAM_11080 Acetyltransferase (GNAT) family protein K06975 K06975; uncharacterized protein D CETAM_04710 cocE; Cocaine esterase K06978 K06978; uncharacterized protein D CETAM_11305 hypothetical protein K06986 K06986; uncharacterized protein D CETAM_01000 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein D CETAM_01195 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein D CETAM_11295 Endonuclease/Exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein D CETAM_04105 Glyoxalase-like domain protein K07032 K07032; uncharacterized protein D CETAM_02700 Amidohydrolase K07045 K07045; uncharacterized protein D CETAM_04385 Amidohydrolase K07045 K07045; uncharacterized protein D CETAM_07280 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D CETAM_01605 hypothetical protein K07068 K07068; uncharacterized protein D CETAM_06520 Epimerase family protein K07071 K07071; uncharacterized protein D CETAM_07175 Epimerase family protein K07071 K07071; uncharacterized protein D CETAM_10340 putative permease K07089 K07089; uncharacterized protein D CETAM_10190 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein D CETAM_12155 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein D CETAM_00145 hypothetical protein K07090 K07090; uncharacterized protein D CETAM_05970 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein D CETAM_11595 hypothetical protein K07093 K07093; uncharacterized protein D CETAM_00395 hypothetical protein K07093 K07093; uncharacterized protein D CETAM_01435 phosphodiesterase YaeI K07098 K07098; uncharacterized protein D CETAM_09965 putative inner membrane protein K07112 K07112; uncharacterized protein D CETAM_04520 hypothetical protein K07118 K07118; uncharacterized protein D CETAM_04420 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein D CETAM_00950 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein D CETAM_00955 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein D CETAM_00960 hypothetical protein K07120 K07120; uncharacterized protein D CETAM_05620 hypothetical protein K07149 K07149; uncharacterized protein D CETAM_01620 hypothetical protein K07149 K07149; uncharacterized protein D CETAM_09170 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein D CETAM_13345 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D CETAM_06460 hypothetical protein K08999 K08999; uncharacterized protein D CETAM_04185 hypothetical protein K09009 K09009; uncharacterized protein D CETAM_01440 Yqey-like protein K09117 K09117; uncharacterized protein D CETAM_03380 hypothetical protein K09118 K09118; uncharacterized protein D CETAM_04920 hypothetical protein K09146 K09146; uncharacterized protein D CETAM_06890 hypothetical protein K09157 K09157; uncharacterized protein D CETAM_02830 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein D CETAM_07965 YciI-like protein K09780 K09780; uncharacterized protein D CETAM_04835 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein D CETAM_13080 ybaN; Inner membrane protein YbaN K09790 K09790; uncharacterized protein D CETAM_06245 hypothetical protein K09791 K09791; uncharacterized protein D CETAM_11585 hypothetical protein K09793 K09793; uncharacterized protein D CETAM_08110 hypothetical protein K09861 K09861; uncharacterized protein D CETAM_04845 hypothetical protein K09956 K09956; uncharacterized protein D CETAM_08080 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024