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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Chondromyces crocatus</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
E        CMC5_011950 peptidyl-prolyl cis-trans isomerase	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        CMC5_007640 rpoA; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        CMC5_015480 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        CMC5_015490 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        CMC5_076230 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] 
D      Sigma factors
E        CMC5_066810 RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor 
E        CMC5_039680 rpoD; RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor 
E        CMC5_075020 uncharacterized protein	K03086 rpoD; RNA polymerase primary sigma factor 
E        CMC5_047230 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_054730 DNA-directed RNA polymerase sigma-70 factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_002500 ECF family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_002540 algU; RNA polymerase sigma factor AlgU	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_010320 ECF family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_066860 RNA polymerase subunit sigma-24	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_054600 uncharacterized protein	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_060160 transcriptional regulator	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_074520 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        CMC5_073790 DNA-directed RNA polymerase sigma-70 factor	K03089 rpoH; RNA polymerase sigma-32 factor 
E        CMC5_082370 uncharacterized protein	K03089 rpoH; RNA polymerase sigma-32 factor 
E        CMC5_004450 uncharacterized protein	K03089 rpoH; RNA polymerase sigma-32 factor 
E        CMC5_019010 DNA-directed RNA polymerase sigma-70 factor	K03089 rpoH; RNA polymerase sigma-32 factor 
E        CMC5_000440 RNA polymerase sigma54 factor	K03092 rpoN; RNA polymerase sigma-54 factor 
E        CMC5_025240 uncharacterized protein	K02405 fliA; RNA polymerase sigma factor FliA 
E        CMC5_020250 uncharacterized protein	K02405 fliA; RNA polymerase sigma factor FliA 
E        CMC5_065550 RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        CMC5_028900 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA 
E        CMC5_076370 N utilization substance protein B	K03625 nusB; transcription antitermination protein NusB 
E        CMC5_015430 nusG; transcription termination/antitermination factorNusG	K02601 nusG; transcription termination/antitermination protein NusG 
E        CMC5_049780 protein kinase	K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] 
E        CMC5_045730 uncharacterized protein	K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] 
E        CMC5_045740 uncharacterized protein	K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] 
E        CMC5_049760 uncharacterized protein	K17762 rsbS; rsbT antagonist protein RsbS 
E        CMC5_045720 sulfate transporter	K17762 rsbS; rsbT antagonist protein RsbS 
E        CMC5_002170 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_030880 anti-anti sigma factor protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_042140 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_055610 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_068290 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_077450 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_053130 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_059340 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_059350 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_043730 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_064650 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_015080 diguanylate cyclase	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_023620 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_059330 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_075610 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_073580 anti-anti sigma factor protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_073160 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_083650 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_053210 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_015550 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_063420 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_071970 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_002160 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_002180 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022400 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022420 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_030930 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_029490 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_029580 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_029600 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_029660 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_004670 anti-anti sigma factor protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022430 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022440 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022450 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022460 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_022470 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_012360 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_030600 rsbV; anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_048180 sigma-b regulator rsbr	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_009040 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_045710 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_037750 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_021770 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_048650 anti-anti sigma factor protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_070620 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_016330 anti-anti sigma factor protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_055790 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_073390 uncharacterized protein	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        CMC5_031650 uncharacterized protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_031670 thrH; phosphoserine phosphatase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_010130 uncharacterized protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_010210 uncharacterized protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_019130 uncharacterized protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_019940 uncharacterized protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_077730 protein phosphatase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_079140 uncharacterized protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        CMC5_009210 sigma factor sigB regulation protein rsbQ	K19707 rsbQ; sigma-B regulation protein RsbQ 
E        CMC5_049770 uncharacterized protein	K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3] 
E        CMC5_019180 anti-sigma factor antagonist	K04749 rsbV; anti-sigma B factor antagonist 
E        CMC5_019190 uncharacterized protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
D      Transcription elongation factors
E        CMC5_050290 traR; conjugal transfer protein TraR	K06204 dksA; RNA polymerase-binding transcription factor 
E        CMC5_004850 dnaK; molecular chaperone DnaK	K06204 dksA; RNA polymerase-binding transcription factor 
E        CMC5_045890 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
E        CMC5_053200 gramicidin S synthase	K04760 greB; transcription elongation factor GreB 
E        CMC5_042110 greB; transcription elongation factor GreB	K04760 greB; transcription elongation factor GreB 
D      Transcription termination factor
E        CMC5_007680 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024