+D GENES KO
#
KEGG Orthology (KO) - Coprococcus catus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cct00010]
D CC1_01820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CC1_12410 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_13280 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_28650 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_33700 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CC1_12700 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13320 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13220 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_18650 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_18630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CC1_18640 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CC1_18660 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CC1_34110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CC1_19230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CC1_34350 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CC1_13410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_24720 Galactose mutarotase and related enzymes K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_05170 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CC1_06480 PTS system, glucose subfamily, IIA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cct00020]
D CC1_10410 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CC1_11240 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CC1_11250 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CC1_02710 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CC1_04790 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CC1_04780 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CC1_05170 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CC1_34350 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cct00030]
D CC1_12410 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_13280 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_33560 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CC1_25000 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CC1_24740 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CC1_27670 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CC1_07340 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CC1_20140 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_15390 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CC1_12700 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13320 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_33700 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_28650 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cct00040]
D CC1_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CC1_03470 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CC1_27660 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CC1_25000 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CC1_27640 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D CC1_10230 Sugar (pentulose and hexulose) kinases K00854 xylB; xylulokinase [EC:2.7.1.17]
D CC1_27700 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:cct00051]
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_28650 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_33700 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CC1_14580 Threonine dehydrogenase and related Zn-dependent dehydrogenases K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D CC1_13340 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CC1_12700 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13320 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13220 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_18650 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_07340 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CC1_13350 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:cct00052]
D CC1_24720 Galactose mutarotase and related enzymes K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CC1_00310 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CC1_00320 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_01820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CC1_00820 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CC1_04760 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_28650 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_10870 Glycosidases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CC1_17010 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:cct00053]
D CC1_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CC1_04390 Nucleoside-diphosphate-sugar epimerases K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CC1_03460 L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D CC1_03470 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CC1_27660 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cct00500]
D CC1_10870 Glycosidases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CC1_15440 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CC1_01310 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D CC1_11950 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CC1_28260 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CC1_17010 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CC1_12760 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_01820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CC1_12410 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_13280 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cct00520]
D CC1_10950 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CC1_13310 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CC1_13300 6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CC1_14260 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CC1_23540 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CC1_33860 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CC1_11880 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CC1_23000 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CC1_01830 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CC1_07510 Nucleoside-diphosphate-sugar epimerases K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D CC1_06480 PTS system, glucose subfamily, IIA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CC1_01820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CC1_00310 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CC1_00320 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CC1_04760 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CC1_04390 Nucleoside-diphosphate-sugar epimerases K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CC1_12410 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_13280 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_15440 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cct00620]
D CC1_34350 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CC1_10270 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CC1_33100 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CC1_19230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CC1_24290 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CC1_24270 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_11610 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_15840 Acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_24700 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_07810 FAD/FMN-containing dehydrogenases K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CC1_16380 FAD/FMN-containing dehydrogenases K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CC1_13410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CC1_08490 Lactoylglutathione lyase and related lyases K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CC1_26510 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CC1_24760 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CC1_15040 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CC1_25140 Uncharacterized conserved protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CC1_10800 Uncharacterized conserved protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CC1_18410 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CC1_18390 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CC1_04790 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CC1_04780 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CC1_05170 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_32490 2-isopropylmalate synthase, yeast type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cct00630]
D CC1_10410 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CC1_11240 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_14800 Acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D CC1_11620 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CC1_14170 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CC1_25110 Predicted phosphatases K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CC1_23090 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CC1_17920 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32380 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_33820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CC1_01250 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:cct00640]
D CC1_11610 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_15840 Acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_24700 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_10270 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CC1_33100 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CC1_11640 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB K20626 lcdA; lactoyl-CoA dehydratase subunit alpha [EC:4.2.1.54]
D CC1_11650 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB K20627 lcdB; lactoyl-CoA dehydratase subunit beta [EC:4.2.1.54]
D CC1_24290 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CC1_24270 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CC1_11620 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CC1_13410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CC1_18110 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:cct00650]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_10500 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_14650 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_30780 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_33280 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_00760 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CC1_14660 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CC1_27120 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CC1_15130 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33430 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33440 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_15120 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_07760 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CC1_14800 Acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D CC1_18390 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CC1_18380 Acetyl/propionyl-CoA carboxylase, alpha subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CC1_18370 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CC1_02710 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CC1_34350 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CC1_08390 Threonine dehydrogenase and related Zn-dependent dehydrogenases K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D CC1_05440 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_34250 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_05450 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_34190 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cct00660]
D CC1_05440 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_34250 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_05450 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_34190 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_20220 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CC1_20240 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CC1_20230 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CC1_20250 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CC1_34230 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cct00562]
D CC1_06700 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CC1_13220 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_18650 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cct00190]
D CC1_02710 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CC1_07430 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CC1_07450 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CC1_13490 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CC1_07440 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CC1_13500 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CC1_07420 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CC1_13520 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CC1_07460 ATP synthase, F1 epsilon subunit (delta in mitochondria) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CC1_13480 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CC1_07380 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CC1_13550 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CC1_07410 F0F1-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CC1_13530 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CC1_07390 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CC1_13540 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CC1_12430 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D CC1_12440 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D CC1_16540 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:cct00710]
D CC1_18640 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CC1_18630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CC1_12700 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13320 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_33700 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CC1_24740 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CC1_07340 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CC1_13220 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_18650 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_25000 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CC1_05170 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Carbon fixation pathways in prokaryotes [PATH:cct00720]
D CC1_34350 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CC1_04790 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CC1_04780 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CC1_02710 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_11250 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CC1_11240 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CC1_24290 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CC1_24270 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CC1_11620 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CC1_19990 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CC1_19980 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CC1_33100 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CC1_10270 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:cct00680]
D CC1_33820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CC1_34110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CC1_12700 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_13320 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CC1_33700 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_28650 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CC1_10270 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CC1_33100 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CC1_18660 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CC1_34270 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CC1_34260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CC1_03980 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D CC1_29650 malate dehydrogenase (NAD) K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
C 00910 Nitrogen metabolism [PATH:cct00910]
D CC1_26680 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D CC1_26760 Nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH
D CC1_07990 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CC1_24240 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CC1_01340 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CC1_17920 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32380 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32670 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CC1_15910 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CC1_32680 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CC1_06260 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CC1_06330 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cct00920]
D CC1_13260 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CC1_13230 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CC1_13240 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CC1_30010 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CC1_29810 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CC1_25330 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CC1_32220 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CC1_03450 Cystathionine beta-lyases/cystathionine gamma-synthases K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cct00061]
D CC1_24290 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CC1_24270 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CC1_16440 acyl carrier protein K02078 acpP; acyl carrier protein
D CC1_24340 Acyl carrier protein K02078 acpP; acyl carrier protein
D CC1_24320 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CC1_24350 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CC1_24300 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CC1_00450 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24310 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24280 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CC1_24330 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cct00071]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_14970 acetyl-CoA acetyltransferases K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_30790 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cct00561]
D CC1_01250 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_13190 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CC1_17230 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CC1_17470 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CC1_12750 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CC1_32820 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CC1_18230 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:cct00564]
D CC1_25130 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CC1_10080 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CC1_17470 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CC1_12750 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CC1_32820 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CC1_18230 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CC1_05870 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CC1_05880 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition K04019 eutA; ethanolamine utilization protein EutA
D CC1_05900 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D CC1_19960 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CC1_10420 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D CC1_00820 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:cct00592]
D CC1_14970 acetyl-CoA acetyltransferases K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_30790 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cct00230]
D CC1_20140 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_15390 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CC1_03340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CC1_29300 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CC1_29330 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CC1_29320 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CC1_33390 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CC1_29310 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CC1_29280 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CC1_29290 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CC1_03330 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CC1_03350 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CC1_15770 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CC1_15760 IMP cyclohydrolase-like protein. K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D CC1_24780 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CC1_20030 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CC1_31940 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CC1_24850 Predicted sugar phosphatases of the HAD superfamily K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CC1_00790 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CC1_17440 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CC1_10830 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CC1_20330 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CC1_14700 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CC1_16940 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CC1_24550 xanthine dehydrogenase, molybdenum binding subunit apoprotein K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D CC1_24540 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CC1_24580 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CC1_31070 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CC1_31900 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CC1_00160 Cytosine deaminase and related metal-dependent hydrolases K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CC1_24560 Cytosine deaminase and related metal-dependent hydrolases K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CC1_20980 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CC1_23500 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CC1_05040 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CC1_14160 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CC1_20560 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CC1_25450 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CC1_16700 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D CC1_24770 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CC1_16530 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CC1_33110 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CC1_24980 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CC1_00930 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CC1_14630 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CC1_24650 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CC1_29600 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CC1_13850 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CC1_06260 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:cct00240]
D CC1_06430 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CC1_32370 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CC1_32360 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CC1_29580 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CC1_29570 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CC1_24450 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CC1_28970 dihydroorotate dehydrogenase (subfamily 1) family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CC1_28960 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CC1_29230 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CC1_28950 orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CC1_29840 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CC1_30060 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CC1_01780 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CC1_18450 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CC1_16750 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CC1_20030 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CC1_31940 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CC1_24850 Predicted sugar phosphatases of the HAD superfamily K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CC1_26920 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CC1_11370 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CC1_26930 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CC1_14160 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CC1_20560 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CC1_25450 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CC1_07350 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CC1_21040 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CC1_25490 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CC1_26280 dUTPase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CC1_24960 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CC1_26290 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CC1_12420 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cct00250]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_05290 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CC1_27020 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CC1_10730 Predicted amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CC1_23180 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CC1_34310 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CC1_14630 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CC1_03350 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CC1_29580 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CC1_29570 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CC1_32670 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CC1_15910 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CC1_32680 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CC1_01340 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CC1_17920 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32380 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_06430 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CC1_32370 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CC1_32360 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CC1_14260 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CC1_03340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CC1_29300 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cct00260]
D CC1_07250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CC1_33020 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CC1_03980 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D CC1_19920 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CC1_00430 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CC1_33820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CC1_01250 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CC1_18660 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CC1_34270 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CC1_34260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CC1_11150 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CC1_11160 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CC1_11270 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CC1_25590 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CC1_25580 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CC1_03220 diaminobutyrate aminotransferase apoenzyme K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:cct00270]
D CC1_29810 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CC1_25330 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CC1_29210 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CC1_34090 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CC1_34080 Methionine synthase I (cobalamin-dependent), methyltransferase domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D CC1_08830 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CC1_03130 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CC1_12380 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CC1_17440 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CC1_08530 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CC1_33550 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CC1_07250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CC1_33020 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CC1_32220 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CC1_03450 Cystathionine beta-lyases/cystathionine gamma-synthases K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CC1_20380 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CC1_23990 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CC1_24940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_13410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CC1_11150 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CC1_11160 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CC1_34270 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CC1_34260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cct00280]
D CC1_24940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CC1_14970 acetyl-CoA acetyltransferases K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_30790 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_11620 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CC1_34180 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cct00290]
D CC1_11270 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CC1_20220 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CC1_20240 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CC1_20230 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CC1_20250 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CC1_34230 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CC1_05440 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_34250 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_05450 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_34190 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_34200 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CC1_34240 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CC1_24940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CC1_32490 2-isopropylmalate synthase, yeast type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cct00300]
D CC1_07250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CC1_33020 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CC1_03880 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CC1_33680 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CC1_33690 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CC1_23130 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CC1_03600 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CC1_23920 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CC1_07110 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CC1_06680 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CC1_00840 Aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CC1_24920 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CC1_14290 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CC1_33090 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cct00310]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_15150 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D CC1_10470 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D CC1_27090 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D CC1_30820 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D CC1_15130 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33430 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33440 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_15120 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_07760 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cct00220]
D CC1_29550 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CC1_23180 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CC1_34310 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CC1_14300 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family K01476 rocF; arginase [EC:3.5.3.1]
D CC1_17920 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32380 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_06430 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CC1_32370 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CC1_32360 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CC1_06260 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CC1_01340 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_23150 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CC1_23160 N-acetylglutamate synthase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D CC1_14240 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CC1_23140 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CC1_23170 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CC1_23130 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cct00330]
D CC1_13600 Uncharacterized protein, putative amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CC1_03120 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CC1_05030 Arginine/lysine/ornithine decarboxylases K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CC1_03160 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CC1_03170 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CC1_03130 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CC1_03150 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_14300 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family K01476 rocF; arginase [EC:3.5.3.1]
D CC1_19140 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CC1_17870 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CC1_17900 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cct00340]
D CC1_17600 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CC1_17590 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CC1_17640 phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CC1_22900 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CC1_16980 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CC1_16990 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CC1_17620 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CC1_31990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CC1_06670 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CC1_17610 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:cct00350]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_31990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:cct00360]
D CC1_05430 uncharacterized domain 1 K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D CC1_10500 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_14650 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_30780 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_33280 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_31990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cct00380]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cct00400]
D CC1_00680 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CC1_18260 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CC1_29430 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CC1_11860 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CC1_29340 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CC1_14250 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CC1_24890 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CC1_25590 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CC1_25580 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CC1_16090 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CC1_19340 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_31990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cct00410]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_12420 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:cct00430]
D CC1_11030 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CC1_33100 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CC1_10270 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cct00450]
D CC1_03450 Cystathionine beta-lyases/cystathionine gamma-synthases K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CC1_29210 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CC1_34090 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CC1_34080 Methionine synthase I (cobalamin-dependent), methyltransferase domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D CC1_33970 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CC1_27000 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CC1_06320 putative selenate reductase, YgfK subunit K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D CC1_13630 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CC1_05190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cct00460]
D CC1_11030 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CC1_27020 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CC1_33820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cct00470]
D CC1_19180 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CC1_33080 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CC1_30690 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CC1_07110 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CC1_24920 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cct00480]
D CC1_11030 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CC1_08810 AIG2-like family. K00682 GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9]
D CC1_18840 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CC1_11250 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CC1_03130 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cct00511]
D CC1_00820 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cct00541]
D CC1_00320 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CC1_04760 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CC1_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CC1_04390 Nucleoside-diphosphate-sugar epimerases K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CC1_04000 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CC1_04010 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CC1_04030 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CC1_04020 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CC1_27530 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CC1_33860 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:cct00550]
D CC1_11880 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CC1_23000 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CC1_01830 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CC1_15420 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CC1_14290 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CC1_33080 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CC1_33090 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CC1_29870 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CC1_20010 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CC1_11140 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CC1_12360 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CC1_00870 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CC1_21840 Membrane carboxypeptidase (penicillin-binding protein) K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CC1_23020 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CC1_23030 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CC1_18270 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18120 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_05420 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_22610 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18350 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18700 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CC1_18320 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CC1_18330 Predicted glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cct00552]
D CC1_20010 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CC1_07490 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D CC1_32540 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CC1_05390 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CC1_04110 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cct00543]
D CC1_11090 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CC1_28070 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CC1_05580 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CC1_17300 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CC1_29810 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cct00730]
D CC1_10440 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CC1_18600 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_23710 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_29710 tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CC1_01150 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CC1_29700 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CC1_29720 Thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D CC1_30730 Hydroxyethylthiazole kinase, sugar kinase family K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CC1_30740 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CC1_25010 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CC1_24990 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CC1_13850 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CC1_13460 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cct00740]
D CC1_16240 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CC1_16220 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CC1_16250 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CC1_16230 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CC1_30030 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CC1_30850 Nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D CC1_30730 Hydroxyethylthiazole kinase, sugar kinase family K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:cct00750]
D CC1_15350 Pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CC1_34260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CC1_19920 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cct00760]
D CC1_05290 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CC1_05320 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CC1_05300 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CC1_05790 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CC1_00790 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CC1_20030 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CC1_31940 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CC1_24850 Predicted sugar phosphatases of the HAD superfamily K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D CC1_19000 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CC1_25170 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CC1_34480 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CC1_33710 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CC1_20040 Amidases related to nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CC1_10220 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CC1_01170 Predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cct00770]
D CC1_05440 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_34250 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CC1_05450 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_34190 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CC1_34200 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CC1_34240 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CC1_30760 Ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CC1_31950 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CC1_27040 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CC1_01470 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D CC1_01950 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CC1_17160 pantetheine-phosphate adenylyltransferase, bacterial K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CC1_18800 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CC1_24940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CC1_12420 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cct00780]
D CC1_24300 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CC1_00450 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24310 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24280 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CC1_23910 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes K01012 bioB; biotin synthase [EC:2.8.1.6]
D CC1_01930 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:cct00790]
D CC1_20080 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CC1_16500 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CC1_24950 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CC1_16480 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CC1_14540 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CC1_16240 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CC1_20060 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CC1_20070 Organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CC1_20090 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CC1_20100 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CC1_27430 Metal-dependent hydrolases of the beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CC1_18770 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CC1_13570 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CC1_05340 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CC1_16910 Uncharacterized MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CC1_33400 molybdopterin-guanine dinucleotide biosynthesis protein MobB K13818 mobAB; molybdopterin-guanine dinucleotide biosynthesis protein [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cct00670]
D CC1_24950 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CC1_19990 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CC1_19980 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CC1_33820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CC1_29320 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CC1_15770 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CC1_25070 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CC1_34090 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CC1_34080 Methionine synthase I (cobalamin-dependent), methyltransferase domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D CC1_24960 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CC1_26290 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CC1_17890 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cct00860]
D CC1_32770 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CC1_32810 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CC1_32800 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CC1_32790 porphobilinogen deaminase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CC1_32780 siroheme synthase, N-terminal domain K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CC1_20470 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CC1_10340 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CC1_12480 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CC1_12490 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CC1_12460 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CC1_11750 precorrin-6x reductase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CC1_11840 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CC1_11760 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CC1_14130 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CC1_11830 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CC1_11820 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CC1_11780 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CC1_11800 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CC1_11790 Cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CC1_11770 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CC1_11810 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CC1_08160 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cct00900]
D CC1_01150 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CC1_16200 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CC1_12630 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CC1_20450 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CC1_29910 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_27080 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D CC1_01140 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CC1_29870 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:cct00903]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_05780 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:cct00907]
D CC1_14970 acetyl-CoA acetyltransferases K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_30790 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CC1_24740 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cct00523]
D CC1_04000 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CC1_04010 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CC1_04030 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CC1_04020 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CC1_27530 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CC1_04010 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cct00946]
D CC1_02860 NADH:flavin oxidoreductases, Old Yellow Enzyme family K26178 fcr; flavanone/flavanol-cleaving reductase
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CC1_30750 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:cct00332]
D CC1_17870 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CC1_17900 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cct00261]
D CC1_07250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CC1_33020 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CC1_03880 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CC1_33680 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CC1_33690 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cct00521]
D CC1_01820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CC1_12580 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CC1_06700 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CC1_04000 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CC1_04010 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CC1_04030 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CC1_04020 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CC1_27530 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CC1_01820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cct00525]
D CC1_04000 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CC1_04010 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cct00401]
D CC1_19340 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_31990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CC1_24320 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CC1_00450 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24310 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CC1_16440 acyl carrier protein K02078 acpP; acyl carrier protein
D CC1_24340 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CC1_08830 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CC1_17280 Diaminopimelate decarboxylase K23373 sbnH; 2-[(L-alanin-3-ylcarbamoyl)methyl]-2-hydroxybutanedioate decarboxylase [EC:4.1.1.117]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cct00362]
D CC1_14970 acetyl-CoA acetyltransferases K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_30790 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_09370 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CC1_09870 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CC1_18390 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CC1_18380 Acetyl/propionyl-CoA carboxylase, alpha subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CC1_18370 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CC1_10500 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_14650 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_30780 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_33280 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D CC1_15130 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33430 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33440 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_15120 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_07760 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cct00625]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CC1_31970 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_34210 aldehyde dehydrogenase (acceptor) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CC1_26680 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D CC1_26760 Nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D CC1_14970 acetyl-CoA acetyltransferases K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CC1_30790 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:cct00643]
D CC1_11640 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB K20626 lcdA; lactoyl-CoA dehydratase subunit alpha [EC:4.2.1.54]
D CC1_11650 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB K20627 lcdB; lactoyl-CoA dehydratase subunit beta [EC:4.2.1.54]
D CC1_11610 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_15840 Acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CC1_24700 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D CC1_05780 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cct00626]
D CC1_25500 NAD-dependent aldehyde dehydrogenases K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cct03020]
D CC1_13080 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CC1_13090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
C 03022 Basal transcription factors
D CC1_32000 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cct03010]
D CC1_33000 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CC1_22770 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CC1_14000 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CC1_13780 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CC1_13890 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CC1_14940 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CC1_13920 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CC1_30100 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CC1_14070 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CC1_13790 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D CC1_13660 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CC1_13800 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CC1_13930 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CC1_34320 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D CC1_17350 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CC1_14960 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CC1_14020 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CC1_17700 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CC1_13020 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D CC1_14030 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CC1_14060 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3
D CC1_14050 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CC1_13940 Ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CC1_13910 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CC1_13040 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CC1_15210 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CC1_13030 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D CC1_13010 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CC1_30090 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CC1_13960 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CC1_13870 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CC1_13990 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CC1_13760 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CC1_13900 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CC1_17390 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D CC1_33270 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CC1_18950 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CC1_14010 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CC1_14040 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CC1_18970 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CC1_17100 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D CC1_13880 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CC1_01360 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D CC1_17210 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CC1_04880 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CC1_33260 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D CC1_13810 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36
D CC1_R_35000 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CC1_R_34990 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cct00970]
D CC1_T_34650 CC1_T_34650 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34910 CC1_T_34910 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34930 CC1_T_34930 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34760 CC1_T_34760 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34690 CC1_T_34690 K14221 tRNA-Asp; tRNA Asp
D CC1_T_34880 CC1_T_34880 K14221 tRNA-Asp; tRNA Asp
D CC1_T_34600 CC1_T_34600 K14222 tRNA-Cys; tRNA Cys
D CC1_T_34950 CC1_T_34950 K14223 tRNA-Gln; tRNA Gln
D CC1_T_34620 CC1_T_34620 K14223 tRNA-Gln; tRNA Gln
D CC1_T_34660 CC1_T_34660 K14224 tRNA-Glu; tRNA Glu
D CC1_T_34850 CC1_T_34850 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34590 CC1_T_34590 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34810 CC1_T_34810 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34820 CC1_T_34820 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34830 CC1_T_34830 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34580 CC1_T_34580 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34940 CC1_T_34940 K14226 tRNA-His; tRNA His
D CC1_T_34550 CC1_T_34550 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34670 CC1_T_34670 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34970 CC1_T_34970 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34900 CC1_T_34900 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34780 CC1_T_34780 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34790 CC1_T_34790 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34960 CC1_T_34960 K14229 tRNA-Lys; tRNA Lys
D CC1_T_34750 CC1_T_34750 K14229 tRNA-Lys; tRNA Lys
D CC1_T_34540 CC1_T_34540 K14229 tRNA-Lys; tRNA Lys
D CC1_T_34730 CC1_T_34730 K14230 tRNA-Met; tRNA Met
D CC1_T_34870 CC1_T_34870 K14230 tRNA-Met; tRNA Met
D CC1_T_34610 CC1_T_34610 K14230 tRNA-Met; tRNA Met
D CC1_T_34570 CC1_T_34570 K14231 tRNA-Phe; tRNA Phe
D CC1_T_34740 CC1_T_34740 K14231 tRNA-Phe; tRNA Phe
D CC1_T_34920 CC1_T_34920 K14232 tRNA-Pro; tRNA Pro
D CC1_T_34680 CC1_T_34680 K14232 tRNA-Pro; tRNA Pro
D CC1_T_34630 CC1_T_34630 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34800 CC1_T_34800 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34640 CC1_T_34640 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34980 CC1_T_34980 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34530 CC1_T_34530 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34840 CC1_T_34840 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34710 CC1_T_34710 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34860 CC1_T_34860 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34770 CC1_T_34770 K14235 tRNA-Trp; tRNA Trp
D CC1_T_34560 CC1_T_34560 K14236 tRNA-Tyr; tRNA Tyr
D CC1_T_34720 CC1_T_34720 K14236 tRNA-Tyr; tRNA Tyr
D CC1_T_34700 CC1_T_34700 K14237 tRNA-Val; tRNA Val
D CC1_T_34890 CC1_T_34890 K14237 tRNA-Val; tRNA Val
D CC1_33330 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CC1_03300 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CC1_03310 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CC1_03290 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CC1_20370 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CC1_17660 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CC1_01280 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_33810 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_28500 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CC1_20280 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CC1_03820 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CC1_25520 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CC1_20420 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CC1_05190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CC1_25070 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CC1_14550 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CC1_19310 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CC1_28250 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CC1_05010 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CC1_15720 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CC1_33800 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CC1_19870 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CC1_01230 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CC1_29760 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cct03060]
D CC1_13860 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CC1_12990 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CC1_18670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CC1_24800 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CC1_24860 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CC1_16070 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CC1_17340 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CC1_35090 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CC1_17260 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CC1_17400 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CC1_32990 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CC1_01770 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CC1_18210 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cct04122]
D CC1_18600 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_23710 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_18620 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CC1_18770 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CC1_13570 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cct03018]
D CC1_34110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CC1_34330 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CC1_18680 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CC1_23380 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CC1_01350 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_23750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_28800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_20350 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CC1_16540 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cct03030]
D CC1_11290 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CC1_01870 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CC1_28660 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CC1_05050 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CC1_23830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CC1_04860 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CC1_15220 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CC1_16710 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CC1_14950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_20690 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_17520 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CC1_18790 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CC1_18590 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cct03410]
D CC1_25340 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CC1_01460 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CC1_17000 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CC1_16690 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CC1_29360 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CC1_23950 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CC1_12720 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CC1_18790 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CC1_18590 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cct03420]
D CC1_15470 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CC1_00570 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CC1_00560 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CC1_01800 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CC1_03670 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CC1_33340 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CC1_18790 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CC1_18590 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CC1_32000 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cct03430]
D CC1_17990 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CC1_11380 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CC1_18000 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CC1_03670 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CC1_33340 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CC1_01120 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CC1_01130 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CC1_14950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_20690 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_01870 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CC1_04860 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CC1_28660 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CC1_23830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CC1_05050 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CC1_11290 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CC1_18590 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cct03440]
D CC1_14950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_20690 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_04840 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CC1_20300 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CC1_28680 recombination protein RecR K06187 recR; recombination protein RecR
D CC1_16820 protein RecA K03553 recA; recombination protein RecA
D CC1_18790 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CC1_18500 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CC1_17130 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_08510 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_28220 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_30150 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_26360 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_03940 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_12900 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CC1_01870 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CC1_04860 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CC1_28660 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CC1_23830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CC1_05050 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CC1_11290 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CC1_25090 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cct02010]
D CC1_13260 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CC1_13230 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CC1_13240 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CC1_13420 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D CC1_13440 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D CC1_13450 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D CC1_00400 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CC1_00410 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CC1_00420 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CC1_07170 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CC1_26900 ABC-type spermidine/putrescine transport system, permease component II K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CC1_07160 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein
D CC1_07150 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CC1_26890 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CC1_07140 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CC1_26880 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CC1_16260 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CC1_31790 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CC1_31850 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CC1_00110 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CC1_00340 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D CC1_24630 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D CC1_00130 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D CC1_00360 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D CC1_24610 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D CC1_00140 Uncharacterized ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D CC1_00370 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D CC1_24600 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D CC1_00350 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CC1_24620 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CC1_00120 ABC-type uncharacterized transport systems, ATPase components K23537 nupA; general nucleoside transport system ATP-binding protein
D CC1_27600 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CC1_27630 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CC1_27620 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CC1_27610 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CC1_07620 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D CC1_07630 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D CC1_07640 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D CC1_07650 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CC1_14440 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CC1_14430 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein
D CC1_13110 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CC1_13120 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CC1_13140 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CC1_13150 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CC1_07800 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CC1_25190 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CC1_07790 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CC1_25200 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CC1_25210 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CC1_28210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CC1_28180 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CC1_28190 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D CC1_28200 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_27510 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_12840 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CC1_30960 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CC1_12860 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CC1_30940 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CC1_12850 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CC1_30950 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CC1_32400 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CC1_26210 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CC1_13730 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CC1_09740 Cobalt transport protein. K16785 ecfT; energy-coupling factor transport system permease protein
D CC1_13750 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CC1_13740 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CC1_08430 ABC-2 type transporter. K11051 cylB; multidrug/hemolysin transport system permease protein
D CC1_08420 ABC-type multidrug transport system, ATPase component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D CC1_07310 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CC1_30260 Uncharacterized protein conserved in bacteria K20460 nukE; lantibiotic transport system permease protein
D CC1_30270 Uncharacterized protein conserved in bacteria K20461 nukG; lantibiotic transport system permease protein
D CC1_30250 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D CC1_02410 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CC1_02420 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D CC1_02400 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CC1_01600 Predicted ATPase involved in cell division K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CC1_23200 Predicted permease. K19084 braE; bacitracin transport system permease protein
D CC1_23210 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CC1_00500 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CC1_09760 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CC1_26230 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CC1_09770 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CC1_26240 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CC1_30450 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CC1_05370 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_29460 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_24040 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_05380 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_24030 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_29470 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:cct02060]
D CC1_13380 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CC1_01430 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_13360 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_16430 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_23360 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_32480 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_24880 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr
D CC1_06480 PTS system, glucose subfamily, IIA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CC1_13350 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CC1_13340 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cct03070]
D CC1_24800 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CC1_12990 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CC1_18670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CC1_13860 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CC1_24860 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CC1_16070 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CC1_17260 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CC1_17340 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CC1_02130 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_09640 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_22210 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_25880 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cct02020]
D CC1_06530 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CC1_06520 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CC1_07620 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D CC1_32550 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CC1_26620 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CC1_16950 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CC1_23200 Predicted permease. K19084 braE; bacitracin transport system permease protein
D CC1_23210 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CC1_23220 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CC1_23230 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CC1_16960 Signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22660 Signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CC1_18700 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CC1_02440 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CC1_02430 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CC1_02400 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CC1_02410 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CC1_02420 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D CC1_12340 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D CC1_01300 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CC1_06060 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D CC1_11990 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CC1_12220 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D CC1_15920 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CC1_17920 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32380 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_15130 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33430 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CC1_33440 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_15120 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_07760 butyryl-CoA:acetoacetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CC1_32830 Short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_33150 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D CC1_03900 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D CC1_27590 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CC1_27580 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CC1_10060 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CC1_27980 diguanylate cyclase (GGDEF) domain K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_31040 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_24430 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CC1_14300 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cct02024]
D CC1_33550 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CC1_00680 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CC1_18260 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CC1_26620 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CC1_05830 ABC-type Fe3+ transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CC1_05850 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CC1_05840 ABC-type uncharacterized transport system, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CC1_05860 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CC1_13110 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CC1_13120 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CC1_13140 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CC1_13150 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CC1_16220 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CC1_23890 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CC1_06060 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D CC1_28210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CC1_28180 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CC1_28190 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D CC1_28200 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_27510 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_03400 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_11000 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_15980 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_24120 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_24200 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_28560 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_27470 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_03540 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_03410 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_10980 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_15990 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_24140 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_28570 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_27480 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_03420 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_03560 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_10990 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_16000 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_28580 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_27490 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_24160 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_03580 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_16010 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_27500 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_11010 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_24110 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_24190 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_24180 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_28550 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_03590 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_11020 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_24800 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CC1_12990 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CC1_18670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CC1_13860 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CC1_24860 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CC1_16070 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CC1_17260 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CC1_17340 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CC1_01300 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CC1_02440 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CC1_02430 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CC1_02400 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CC1_02410 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CC1_02420 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CC1_16720 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CC1_25380 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CC1_34110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CC1_34090 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cct01501]
D CC1_10950 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CC1_28210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CC1_28180 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CC1_28190 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D CC1_28200 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_27510 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_00870 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:cct01502]
D CC1_16960 Signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22660 Signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CC1_33080 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CC1_19180 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CC1_33090 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CC1_11140 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CC1_12360 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CC1_18700 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cct01503]
D CC1_07000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CC1_13060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CC1_32550 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cct01000]
C 01001 Protein kinases [BR:cct01001]
D CC1_25020 PASTA domain./Protein kinase domain. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CC1_04270 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CC1_06530 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CC1_23220 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CC1_16960 Signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22660 Signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_02440 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CC1_12340 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D CC1_27590 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CC1_27980 diguanylate cyclase (GGDEF) domain K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_31040 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_24430 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_31860 Signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cct01009]
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_03500 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CC1_25030 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cct01002]
D CC1_01770 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CC1_18210 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CC1_12270 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CC1_33160 type 4 prepilin peptidase 1 . Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CC1_11970 Flp pilus assembly protein, protease CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CC1_23810 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D CC1_31070 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CC1_31900 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CC1_26080 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CC1_03340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CC1_29300 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CC1_32670 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CC1_14260 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CC1_06610 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D CC1_15190 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CC1_30750 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D CC1_12310 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_28350 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_21250 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_21260 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_28340 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_09500 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D CC1_10260 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CC1_30910 dipeptidase A. Cysteine peptidase. MEROPS family C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D CC1_06060 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D CC1_30520 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D CC1_33870 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D CC1_15950 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CC1_18700 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CC1_20320 Predicted Zn-dependent peptidases, insulinase-like K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CC1_13430 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CC1_03600 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CC1_23920 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CC1_32720 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CC1_32240 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CC1_18840 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CC1_01760 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CC1_13840 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CC1_00810 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CC1_13170 Predicted aminopeptidase, Iap family K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D CC1_29270 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CC1_24000 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D CC1_08400 isoaspartyl dipeptidase IadA K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D CC1_01790 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CC1_05350 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CC1_01740 Cellulase M and related proteins K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CC1_32550 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CC1_23290 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D CC1_18270 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18120 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_05420 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_22610 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18350 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_00970 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CC1_00990 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CC1_34120 ATP-dependent Lon protease, bacterial type K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CC1_19040 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CC1_17400 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CC1_32990 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CC1_00510 C-terminal peptidase (prc) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CC1_02530 Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D CC1_25700 Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D CC1_01200 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CC1_11030 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CC1_18520 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CC1_23590 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cct01003]
D CC1_01310 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D CC1_00870 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CC1_21840 Membrane carboxypeptidase (penicillin-binding protein) K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cct01005]
D CC1_04070 Glycosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D CC1_07320 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CC1_07560 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cct01011]
D CC1_11880 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CC1_23000 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CC1_01830 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CC1_15420 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CC1_14290 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CC1_33080 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CC1_19180 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CC1_11140 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CC1_12360 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CC1_20010 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CC1_00870 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CC1_21840 Membrane carboxypeptidase (penicillin-binding protein) K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CC1_23020 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CC1_23030 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CC1_18270 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18120 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_05420 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_22610 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18350 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CC1_18700 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CC1_26080 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CC1_12310 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_28350 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_21250 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_21260 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_28340 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CC1_09500 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D CC1_10260 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CC1_10310 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CC1_07000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CC1_13060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cct01004]
D CC1_24320 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CC1_24350 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CC1_24300 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CC1_00450 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24310 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CC1_24280 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CC1_24330 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CC1_17230 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CC1_17470 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CC1_12750 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CC1_32820 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cct01008]
C 01006 Prenyltransferases [BR:cct01006]
D CC1_01140 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CC1_29870 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CC1_18010 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:cct01007]
D CC1_20370 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CC1_33330 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CC1_01230 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CC1_29760 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CC1_20420 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CC1_05010 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CC1_05190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CC1_28250 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CC1_14550 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CC1_19310 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CC1_01280 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_33810 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_28500 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CC1_33800 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CC1_20280 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CC1_25520 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CC1_15720 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CC1_03820 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CC1_17660 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CC1_19870 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CC1_31980 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CC1_06680 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CC1_00840 Aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CC1_11340 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CC1_31990 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CC1_29210 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CC1_23130 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CC1_03220 diaminobutyrate aminotransferase apoenzyme K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D CC1_32810 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CC1_24940 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CC1_34260 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cct00194]
D CC1_07460 ATP synthase, F1 epsilon subunit (delta in mitochondria) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CC1_13480 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CC1_07450 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CC1_13490 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CC1_07440 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CC1_13500 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CC1_07430 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CC1_07420 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CC1_13520 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CC1_07410 F0F1-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CC1_13530 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CC1_07390 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CC1_13540 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CC1_07380 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CC1_13550 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CC1_07360 Putative F0F1-ATPase subunit (ATPase_gene1). K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cct03000]
D CC1_08530 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CC1_06420 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CC1_34220 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CC1_14570 Transcriptional regulators of sugar metabolism K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D CC1_13290 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CC1_24660 Transcriptional regulators K03710 K03710; GntR family transcriptional regulator
D CC1_16370 Transcriptional regulators K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CC1_14880 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CC1_24520 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CC1_02500 Transcriptional regulators K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CC1_00740 Transcriptional regulators K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CC1_23100 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CC1_23630 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CC1_30980 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CC1_27320 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CC1_32060 Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CC1_33930 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CC1_02670 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CC1_23370 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CC1_30860 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D CC1_21240 Predicted transcriptional regulators K10947 K10947; PadR family transcriptional regulator
D CC1_24390 Predicted transcriptional regulators K10947 K10947; PadR family transcriptional regulator
D CC1_18730 Predicted transcriptional regulators K10947 K10947; PadR family transcriptional regulator
D CC1_33600 Predicted transcriptional regulators K10947 K10947; PadR family transcriptional regulator
D CC1_05140 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CC1_26250 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CC1_01930 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CC1_24930 Predicted transcriptional regulators K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CC1_22880 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CC1_01240 Sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator
D CC1_00480 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D CC1_16270 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D CC1_19200 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor
D CC1_22780 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CC1_11560 Helix-turn-helix. K07726 K07726; putative transcriptional regulator
D CC1_30550 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CC1_22680 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CC1_07840 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D CC1_00460 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CC1_07940 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CC1_27940 Sugar diacid utilization regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D CC1_05120 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CC1_32640 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CC1_02040 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_04980 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_25610 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_25630 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_10140 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K02443 glpP; glycerol uptake operon antiterminator
D CC1_01180 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D CC1_23770 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CC1_13460 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CC1_29720 Thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D CC1_24900 Putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D CC1_22920 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CC1_23060 mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cct03021]
D CC1_32000 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CC1_13080 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CC1_13090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CC1_16720 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CC1_25380 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CC1_34380 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CC1_27390 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CC1_02270 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CC1_10110 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CC1_22890 RNA polymerase, sigma subunit, RpsG/SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CC1_22960 RNA polymerase, sigma 29 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CC1_23580 RNA polymerase, sigma 27/28 subunit, RpsK/SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CC1_29950 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CC1_01110 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CC1_13000 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CC1_01970 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CC1_00850 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CC1_01350 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cct03019]
D CC1_18890 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D CC1_17240 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CC1_18680 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CC1_11390 uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CC1_20910 Predicted HD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CC1_23380 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CC1_34110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CC1_34330 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CC1_01350 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CC1_01880 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_12800 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CC1_23750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_28800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_20350 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CC1_16540 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CC1_01840 Predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cct03011]
D CC1_33000 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CC1_22770 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CC1_14000 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CC1_13780 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CC1_13890 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CC1_14940 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CC1_13920 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CC1_30100 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CC1_14070 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CC1_13790 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D CC1_13660 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CC1_13800 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CC1_13930 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CC1_34320 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D CC1_17350 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CC1_14960 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CC1_14020 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CC1_17700 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CC1_13020 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D CC1_14030 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CC1_14060 50S ribosomal protein L3, bacterial K02906 RP-L3; large subunit ribosomal protein L3
D CC1_14050 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CC1_13940 Ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CC1_13910 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CC1_15210 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CC1_13030 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D CC1_13010 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CC1_13040 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CC1_30090 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CC1_13960 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CC1_13870 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CC1_13990 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CC1_13760 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CC1_13900 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CC1_17390 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D CC1_33270 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CC1_18950 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CC1_14010 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CC1_14040 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CC1_18970 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CC1_17100 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D CC1_13880 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CC1_01360 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D CC1_17210 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CC1_04880 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CC1_33260 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D CC1_13810 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36
D CC1_R_35000 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CC1_R_34990 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cct03009]
D CC1_17240 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CC1_20310 GTP-binding protein Era K03595 era; GTPase
D CC1_18980 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D CC1_29950 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CC1_01110 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CC1_13000 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CC1_17540 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CC1_05280 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CC1_25050 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CC1_17150 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CC1_23720 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CC1_04950 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CC1_23050 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CC1_33040 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CC1_05090 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CC1_01160 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CC1_20400 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CC1_34370 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CC1_16470 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CC1_14080 Predicted SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CC1_25040 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CC1_11400 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CC1_23430 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CC1_03690 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CC1_00780 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CC1_15670 Pseudouridylate synthases, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CC1_18580 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CC1_16150 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CC1_17370 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CC1_19970 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CC1_23730 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CC1_18890 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D CC1_23650 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CC1_20410 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CC1_23380 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CC1_25010 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CC1_17460 ribosome-associated GTPase EngA K03977 engA; GTPase
D CC1_17410 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D CC1_23250 GTP-binding protein HflX K03665 hflX; GTPase
D CC1_24770 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CC1_30000 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CC1_29940 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP
D CC1_04850 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein
D CC1_19020 iojap-related protein K09710 ybeB; ribosome-associated protein
D CC1_17820 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CC1_18990 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
D CC1_16060 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D CC1_23080 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CC1_17200 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cct03016]
D CC1_16180 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CC1_10450 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CC1_12730 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CC1_15720 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CC1_28250 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CC1_19310 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CC1_05190 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CC1_20370 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CC1_05010 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CC1_01280 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_33810 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_17660 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CC1_28500 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CC1_20280 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CC1_03820 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CC1_25520 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CC1_20420 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CC1_14550 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CC1_33800 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CC1_19870 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CC1_01230 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CC1_29760 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CC1_22830 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CC1_12350 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CC1_05460 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CC1_00660 conserved hypothetical protein TIGR00104 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D CC1_16020 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CC1_30020 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CC1_18600 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_23710 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_10480 hypothetical protein K15455 DPH3; diphthamide biosynthesis protein 3
D CC1_18010 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CC1_04930 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CC1_13630 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CC1_04890 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CC1_35030 Bacterial RNase P class A K01978 rnpB; M1 RNA
D CC1_33330 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CC1_28840 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CC1_14180 Uncharacterized conserved protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CC1_06660 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CC1_13700 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CC1_01960 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CC1_17910 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CC1_23670 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CC1_17380 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CC1_16730 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CC1_11350 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CC1_01890 rRNA methylases K03437 spoU; RNA methyltransferase, TrmH family
D CC1_18620 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CC1_07740 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CC1_19060 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CC1_19840 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CC1_20090 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CC1_20060 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CC1_20070 Organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CC1_20100 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CC1_15880 Uncharacterized protein conserved in bacteria K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CC1_24870 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CC1_10820 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CC1_16190 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CC1_16130 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CC1_32430 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CC1_17190 cytidyltransferase-related domain K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CC1_18680 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CC1_34330 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CC1_32340 Predicted nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:cct03012]
D CC1_33250 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D CC1_00700 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CC1_19210 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CC1_22760 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CC1_13690 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CC1_19330 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CC1_10480 hypothetical protein K15455 DPH3; diphthamide biosynthesis protein 3
D CC1_01390 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D CC1_29860 ribosome recycling factor K02838 frr; ribosome recycling factor
D CC1_01380 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CC1_15460 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CC1_13820 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CC1_23560 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D CC1_16080 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D CC1_32600 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cct03110]
D CC1_28050 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CC1_34440 ATPases with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CC1_00980 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CC1_21800 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CC1_32560 endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CC1_03500 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CC1_23750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_28800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_20350 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CC1_23460 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D CC1_23740 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CC1_27270 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D CC1_33770 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33
D CC1_27870 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D CC1_27880 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D CC1_20360 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D CC1_32550 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CC1_01790 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CC1_05350 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CC1_07380 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CC1_13550 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CC1_23290 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D CC1_10200 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CC1_28610 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CC1_09970 Thioredoxin domain-containing protein K03671 TXN; thioredoxin
D CC1_25560 thioredoxin K03671 TXN; thioredoxin
D CC1_26990 Thioredoxin domain-containing protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cct04131]
D CC1_18630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CC1_19230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CC1_03500 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cct03051]
D CC1_03500 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cct03032]
D CC1_17520 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CC1_08530 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CC1_10740 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CC1_15220 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CC1_15400 replicative DNA helicase loader DnaI K02315 dnaC; DNA replication protein DnaC
D CC1_08630 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CC1_06180 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CC1_32100 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D CC1_16710 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CC1_14950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_20690 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_01870 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CC1_04860 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CC1_23830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CC1_05050 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CC1_11290 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CC1_28660 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CC1_18790 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CC1_18590 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CC1_04820 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CC1_28630 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CC1_04830 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CC1_28640 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CC1_01680 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CC1_26110 DNA topoisomerase III, bacteria and conjugative plasmid K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cct03036]
D CC1_08530 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CC1_17240 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CC1_10740 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CC1_17250 condensin subunit Smc K03529 smc; chromosome segregation protein
D CC1_18300 Uncharacterized conserved protein K05896 scpA; segregation and condensation protein A
D CC1_18310 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CC1_10780 Septum formation initiator. K13052 divIC; cell division protein DivIC
D CC1_20000 DNA segregation ATPase FtsK/SpoIIIE and related proteins K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CC1_23040 Septum formation initiator. K03586 ftsL; cell division protein FtsL
D CC1_23010 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D CC1_00500 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CC1_18510 cell division protein ZapA K09888 zapA; cell division protein ZapA
D CC1_07000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CC1_13060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CC1_18080 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CC1_18090 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CC1_18190 DivIVA domain K04074 divIVA; cell division initiation protein
D CC1_18180 Uncharacterized protein conserved in bacteria K09772 sepF; cell division inhibitor SepF
D CC1_12890 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CC1_18050 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CC1_18060 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CC1_18100 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D CC1_02030 CobQ/CobB/MinD/ParA nucleotide binding domain. K03496 parA; chromosome partitioning protein
D CC1_04990 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CC1_25620 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CC1_02040 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_04980 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_25610 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_25630 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_04950 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CC1_19070 Site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC
D CC1_19110 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_09310 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_09820 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_04500 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_04540 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_04550 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_25690 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_25720 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D CC1_01000 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
D CC1_01850 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cct03400]
D CC1_29370 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CC1_17000 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CC1_16690 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CC1_25340 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CC1_01460 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CC1_32000 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CC1_03040 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CC1_27520 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CC1_25490 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CC1_26280 dUTPase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CC1_29360 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CC1_23950 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CC1_12720 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CC1_18590 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CC1_18790 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CC1_00570 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CC1_00560 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CC1_01800 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CC1_03670 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CC1_33340 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CC1_13080 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CC1_13090 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CC1_15470 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CC1_17990 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CC1_11380 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CC1_18000 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CC1_01120 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CC1_01130 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CC1_01870 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CC1_04860 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CC1_23830 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CC1_05050 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CC1_11290 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CC1_28660 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CC1_14950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_20690 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_12900 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CC1_16820 protein RecA K03553 recA; recombination protein RecA
D CC1_18500 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CC1_25090 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CC1_03250 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D CC1_03240 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D CC1_34460 Predicted ATP-dependent serine protease K04485 radA; DNA repair protein RadA/Sms
D CC1_04840 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CC1_17130 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_08510 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_28220 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_30150 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_26360 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_03940 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CC1_20300 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CC1_28680 recombination protein RecR K06187 recR; recombination protein RecR
D CC1_01190 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CC1_17580 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U
D CC1_33740 recombination helicase AddA, Firmicutes type K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CC1_00190 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D CC1_04820 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CC1_28630 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CC1_04830 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CC1_28640 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CC1_10740 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CC1_11850 Nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CC1_02350 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D CC1_25790 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D CC1_29730 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D CC1_19040 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CC1_16830 Uncharacterized protein conserved in bacteria K03565 recX; regulatory protein
D CC1_09300 Rad3-related DNA helicases K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CC1_09810 Rad3-related DNA helicases K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CC1_30010 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cct03029]
D CC1_33250 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D CC1_22760 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CC1_13690 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CC1_19330 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CC1_20310 GTP-binding protein Era K03595 era; GTPase
D CC1_01230 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CC1_19310 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CC1_01280 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_33810 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CC1_20280 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CC1_05010 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CC1_03300 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CC1_03310 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CC1_03290 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CC1_14950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_20690 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CC1_23750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_28800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_20350 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CC1_20360 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D CC1_23460 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D CC1_23740 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CC1_27270 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D CC1_18600 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_23710 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_03500 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cct02000]
D CC1_09760 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CC1_26230 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CC1_09770 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CC1_26240 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CC1_30450 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CC1_05370 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_29460 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_24040 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_05380 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_24030 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_29470 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CC1_32250 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CC1_33500 ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D CC1_00400 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CC1_00410 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CC1_00420 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CC1_13260 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CC1_13230 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CC1_13240 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CC1_07170 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CC1_26900 ABC-type spermidine/putrescine transport system, permease component II K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CC1_07160 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein
D CC1_07150 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CC1_26890 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CC1_07140 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CC1_26880 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CC1_05830 ABC-type Fe3+ transport system, periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CC1_05850 ABC-type spermidine/putrescine transport system, permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CC1_05840 ABC-type uncharacterized transport system, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CC1_05860 ABC-type spermidine/putrescine transport systems, ATPase components K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CC1_13420 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D CC1_13440 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D CC1_13450 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D CC1_13400 NMT1/THI5 like. K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CC1_32910 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CC1_03630 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CC1_03640 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CC1_16260 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CC1_08000 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25086 musE; maltose transport system substrate-binding protein
D CC1_08020 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D CC1_31790 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CC1_31850 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CC1_27600 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CC1_27630 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CC1_27620 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CC1_27610 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CC1_00110 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CC1_00340 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D CC1_24630 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D CC1_00130 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D CC1_00360 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D CC1_24610 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D CC1_00140 Uncharacterized ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D CC1_00370 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D CC1_24600 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D CC1_00350 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CC1_24620 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CC1_00120 ABC-type uncharacterized transport systems, ATPase components K23537 nupA; general nucleoside transport system ATP-binding protein
D CC1_18910 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K02025 ABC.MS.P; multiple sugar transport system permease protein
D CC1_18920 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CC1_07620 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D CC1_07630 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D CC1_07640 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D CC1_07650 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CC1_14440 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CC1_14430 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K17077 artQ; arginine/lysine/histidine transport system permease protein
D CC1_13110 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CC1_13120 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CC1_13140 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CC1_13150 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CC1_07800 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CC1_25190 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CC1_07790 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CC1_25200 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CC1_25210 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CC1_11550 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CC1_24080 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CC1_29610 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CC1_24070 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CC1_29620 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CC1_24060 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CC1_29630 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CC1_11060 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CC1_24440 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CC1_31810 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CC1_11070 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein
D CC1_11080 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CC1_28210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CC1_28180 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D CC1_28190 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D CC1_28200 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_27510 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CC1_03400 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_11000 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_15980 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_24120 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_24200 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_28560 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_27470 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_03540 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CC1_03410 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_10980 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_15990 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_24140 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_28570 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_27480 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CC1_03420 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_03560 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_10990 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_16000 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_28580 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_27490 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_24160 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CC1_03580 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_16010 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_27500 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_11010 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_24110 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_24190 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CC1_24180 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_28550 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_03590 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_11020 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CC1_09200 heme ABC transporter, heme-binding protein isdE K25113 htsA; heme transport system substrate-binding protein
D CC1_29080 heme ABC transporter, heme-binding protein isdE K25113 htsA; heme transport system substrate-binding protein
D CC1_09210 ABC-type Fe3+-siderophore transport system, permease component K25114 htsB; heme transport system permease protein
D CC1_09220 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D CC1_29100 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D CC1_10370 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D CC1_10380 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D CC1_10390 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CC1_12840 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CC1_30960 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CC1_12860 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CC1_30940 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CC1_12850 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CC1_30950 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CC1_32400 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CC1_09730 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D CC1_30420 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D CC1_26200 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D CC1_26210 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CC1_13730 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CC1_09740 Cobalt transport protein. K16785 ecfT; energy-coupling factor transport system permease protein
D CC1_13750 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CC1_13740 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CC1_26220 ATPase components of various ABC-type transport systems, contain duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CC1_08430 ABC-2 type transporter. K11051 cylB; multidrug/hemolysin transport system permease protein
D CC1_08420 ABC-type multidrug transport system, ATPase component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D CC1_07310 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CC1_30250 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D CC1_30260 Uncharacterized protein conserved in bacteria K20460 nukE; lantibiotic transport system permease protein
D CC1_30270 Uncharacterized protein conserved in bacteria K20461 nukG; lantibiotic transport system permease protein
D CC1_02410 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CC1_02420 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D CC1_02400 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CC1_05610 ABC-type transport system involved in multi-copper enzyme maturation, permease component K25151 gldF; gliding motility-associated transport system permease protein
D CC1_23200 Predicted permease. K19084 braE; bacitracin transport system permease protein
D CC1_23210 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CC1_01600 Predicted ATPase involved in cell division K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CC1_00500 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CC1_31310 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CC1_16800 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CC1_17730 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CC1_34170 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CC1_28780 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_17740 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_11440 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_17950 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_34160 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_16790 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_01590 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_06230 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_31300 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_31620 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_30210 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_29400 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CC1_02770 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CC1_07960 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CC1_08250 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CC1_15970 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D CC1_27760 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D CC1_30300 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D CC1_27420 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_02620 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_02760 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_07950 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_08240 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_15960 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_22640 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_30290 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CC1_25270 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CC1_33940 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CC1_33070 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D CC1_25260 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_24670 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CC1_12540 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_08140 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CC1_23310 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CC1_31720 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_00630 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_28100 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_27550 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_07860 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_03490 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_01660 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_01290 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CC1_27850 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CC1_15030 Sugar phosphate permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CC1_13380 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CC1_01430 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_13360 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_16430 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_23360 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_32480 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CC1_24880 PTS HPr component phosphorylation site. K02784 ptsH; phosphocarrier protein HPr
D CC1_06480 PTS system, glucose subfamily, IIA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CC1_13350 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CC1_28920 ammonium transporter K03320 amt; ammonium transporter, Amt family
D CC1_29490 Formate/nitrite family of transporters K21993 fdhC; formate transporter
D CC1_34290 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D CC1_27750 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter
D CC1_19160 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CC1_02800 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CC1_24220 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D CC1_23890 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CC1_15160 L-lactate transport K03303 lutP; lactate permease
D CC1_15830 L-lactate transport K03303 lutP; lactate permease
D CC1_11660 L-lactate transport K03303 lutP; lactate permease
D CC1_25150 L-lactate permease K03303 lutP; lactate permease
D CC1_29190 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D CC1_27060 Na+/proline symporter K14392 panF; sodium/pantothenate symporter
D CC1_32210 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CC1_03190 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D CC1_01210 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain K11105 cvrA; potassium/hydrogen antiporter
D CC1_00300 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D CC1_26590 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D CC1_00290 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D CC1_20190 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D CC1_26600 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D CC1_11360 uracil-xanthine permease K02824 uraA; uracil permease
D CC1_00520 Permeases K06901 pbuG; adenine/guanine/hypoxanthine permease
D CC1_04800 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D CC1_28140 Chromate transport protein ChrA K07240 chrA; chromate transporter
D CC1_28150 Chromate transport protein ChrA K07240 chrA; chromate transporter
D CC1_27010 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family
D CC1_03900 TRAP-type C4-dicarboxylate transport system, small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D CC1_06510 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D CC1_16610 Multisubunit Na+/H+ antiporter, MnhB subunit K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D CC1_16620 Multisubunit Na+/H+ antiporter, MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CC1_16630 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CC1_16640 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CC1_16650 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CC1_16570 Multisubunit Na+/H+ antiporter, MnhE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CC1_16580 Multisubunit Na+/H+ antiporter, MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CC1_16590 Multisubunit Na+/H+ antiporter, MnhG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CC1_17840 Membrane protein involved in the export of O-antigen and teichoic acid K06409 spoVB; stage V sporulation protein B
D CC1_34400 Na+-driven multidrug efflux pump K06409 spoVB; stage V sporulation protein B
D CC1_06600 Predicted permeases K24180 mleP; malate permease and related proteins
D CC1_28510 Predicted permeases K24180 mleP; malate permease and related proteins
D CC1_06990 Predicted permeases K24180 mleP; malate permease and related proteins
D CC1_24230 Predicted permeases K24180 mleP; malate permease and related proteins
D CC1_28020 Predicted permeases K24180 mleP; malate permease and related proteins
D CC1_16840 Predicted permeases K24180 mleP; malate permease and related proteins
D CC1_07730 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D CC1_10930 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D CC1_10940 Branched-chain amino acid transport protein (AzlD). K26606 azlD; branched chain amino acid efflux pump
D CC1_07720 Predicted branched-chain amino acid permeases (azaleucine resistance) K26606 azlD; branched chain amino acid efflux pump
D CC1_23010 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D CC1_11050 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D CC1_19370 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D CC1_32700 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CC1_18390 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CC1_18410 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CC1_18360 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D CC1_18380 Acetyl/propionyl-CoA carboxylase, alpha subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CC1_18370 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CC1_04270 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CC1_04260 Capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D CC1_27720 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D CC1_27290 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D CC1_27300 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D CC1_32410 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D CC1_27310 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D CC1_05820 Uncharacterized membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cct02044]
D CC1_12270 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CC1_33160 type 4 prepilin peptidase 1 . Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CC1_33150 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D CC1_33120 type II secretion system protein E (GspE) K02652 pilB; type IV pilus assembly protein PilB
D CC1_33140 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D CC1_33170 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D CC1_28430 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CC1_33130 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CC1_11970 Flp pilus assembly protein, protease CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CC1_11990 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CC1_12220 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D CC1_23880 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D CC1_07350 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CC1_23840 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D CC1_02130 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_09640 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_22210 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_25880 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CC1_16070 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CC1_24800 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CC1_12990 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CC1_18670 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CC1_13860 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CC1_17340 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CC1_17260 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CC1_24860 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
C 02042 Bacterial toxins [BR:cct02042]
D CC1_19160 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CC1_02800 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CC1_24490 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cct02022]
D CC1_06530 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CC1_06520 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CC1_26620 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CC1_16950 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CC1_23220 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CC1_23230 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CC1_16960 Signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22660 Signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CC1_02440 Signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CC1_02430 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CC1_28810 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D CC1_30660 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D CC1_12340 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D CC1_01300 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CC1_08080 Response regulator containing CheY-like receiver and SARP domains K02477 K02477; two-component system, LytTR family, response regulator
D CC1_27590 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CC1_27580 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CC1_27980 diguanylate cyclase (GGDEF) domain K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_31040 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_24430 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CC1_31860 Signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cct02035]
D CC1_00670 Uncharacterised protein family (UPF0153). K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CC1_28430 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CC1_33130 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CC1_33150 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D CC1_33120 type II secretion system protein E (GspE) K02652 pilB; type IV pilus assembly protein PilB
D CC1_33140 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D CC1_12270 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CC1_33160 type 4 prepilin peptidase 1 . Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CC1_33170 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D CC1_11970 Flp pilus assembly protein, protease CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CC1_11990 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cct04812]
D CC1_12890 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CC1_08760 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D CC1_18080 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CC1_18090 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CC1_02030 CobQ/CobB/MinD/ParA nucleotide binding domain. K03496 parA; chromosome partitioning protein
D CC1_04990 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CC1_25620 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CC1_02040 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_04980 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_25610 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CC1_25630 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cct04147]
D CC1_03500 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CC1_34110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CC1_18630 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CC1_18640 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CC1_19230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CC1_03230 3-Cys thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CC1_20350 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CC1_23750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_28800 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CC1_12410 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_13280 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CC1_20330 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CC1_13690 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CC1_12350 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CC1_13410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CC1_15940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_18420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CC1_13850 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CC1_24780 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CC1_34310 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CC1_23180 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CC1_12420 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CC1_00310 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CC1_11950 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CC1_13190 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CC1_17920 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32380 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CC1_32800 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CC1_34270 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CC1_15770 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CC1_11510 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CC1_16410 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CC1_13220 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CC1_18650 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cct02048]
D CC1_00190 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D CC1_00180 CRISPR-associated endonuclease, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D CC1_00210 CRISPR-associated protein, Csn2 family K19137 csn2; CRISPR-associated protein Csn2
D CC1_20650 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CC1_08860 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CC1_09540 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CC1_08530 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CC1_02340 Restriction endonuclease K07448 mrr; restriction system protein
D CC1_00220 Restriction endonuclease K07448 mrr; restriction system protein
D CC1_15690 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D CC1_15680 prevent-host-death family protein K19159 yefM; antitoxin YefM
D CC1_24900 Putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D CC1_08370 death-on-curing family protein K07341 doc; death on curing protein
D CC1_32340 Predicted nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D CC1_32330 Virulence-associated protein and related proteins K18829 mvpT; antitoxin VapB
D CC1_03930 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D CC1_12890 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CC1_18600 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CC1_23710 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cct04090]
C 01504 Antimicrobial resistance genes [BR:cct01504]
D CC1_03190 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D CC1_33060 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D CC1_06500 Chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CC1_16960 Signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_18700 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CC1_22660 Signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CC1_22670 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cct03100]
D CC1_T_34650 CC1_T_34650 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34910 CC1_T_34910 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34930 CC1_T_34930 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34760 CC1_T_34760 K14219 tRNA-Arg; tRNA Arg
D CC1_T_34690 CC1_T_34690 K14221 tRNA-Asp; tRNA Asp
D CC1_T_34880 CC1_T_34880 K14221 tRNA-Asp; tRNA Asp
D CC1_T_34600 CC1_T_34600 K14222 tRNA-Cys; tRNA Cys
D CC1_T_34950 CC1_T_34950 K14223 tRNA-Gln; tRNA Gln
D CC1_T_34620 CC1_T_34620 K14223 tRNA-Gln; tRNA Gln
D CC1_T_34660 CC1_T_34660 K14224 tRNA-Glu; tRNA Glu
D CC1_T_34850 CC1_T_34850 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34590 CC1_T_34590 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34810 CC1_T_34810 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34820 CC1_T_34820 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34830 CC1_T_34830 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34580 CC1_T_34580 K14225 tRNA-Gly; tRNA Gly
D CC1_T_34940 CC1_T_34940 K14226 tRNA-His; tRNA His
D CC1_T_34550 CC1_T_34550 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34670 CC1_T_34670 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34970 CC1_T_34970 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34900 CC1_T_34900 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34780 CC1_T_34780 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34790 CC1_T_34790 K14228 tRNA-Leu; tRNA Leu
D CC1_T_34960 CC1_T_34960 K14229 tRNA-Lys; tRNA Lys
D CC1_T_34750 CC1_T_34750 K14229 tRNA-Lys; tRNA Lys
D CC1_T_34540 CC1_T_34540 K14229 tRNA-Lys; tRNA Lys
D CC1_T_34730 CC1_T_34730 K14230 tRNA-Met; tRNA Met
D CC1_T_34870 CC1_T_34870 K14230 tRNA-Met; tRNA Met
D CC1_T_34610 CC1_T_34610 K14230 tRNA-Met; tRNA Met
D CC1_T_34570 CC1_T_34570 K14231 tRNA-Phe; tRNA Phe
D CC1_T_34740 CC1_T_34740 K14231 tRNA-Phe; tRNA Phe
D CC1_T_34920 CC1_T_34920 K14232 tRNA-Pro; tRNA Pro
D CC1_T_34680 CC1_T_34680 K14232 tRNA-Pro; tRNA Pro
D CC1_T_34630 CC1_T_34630 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34800 CC1_T_34800 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34640 CC1_T_34640 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34980 CC1_T_34980 K14233 tRNA-Ser; tRNA Ser
D CC1_T_34530 CC1_T_34530 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34840 CC1_T_34840 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34710 CC1_T_34710 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34860 CC1_T_34860 K14234 tRNA-Thr; tRNA Thr
D CC1_T_34770 CC1_T_34770 K14235 tRNA-Trp; tRNA Trp
D CC1_T_34560 CC1_T_34560 K14236 tRNA-Tyr; tRNA Tyr
D CC1_T_34720 CC1_T_34720 K14236 tRNA-Tyr; tRNA Tyr
D CC1_T_34700 CC1_T_34700 K14237 tRNA-Val; tRNA Val
D CC1_T_34890 CC1_T_34890 K14237 tRNA-Val; tRNA Val
D CC1_R_35000 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CC1_R_34990 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CC1_35090 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CC1_35030 Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CC1_30800 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D CC1_14980 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D CC1_03890 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CC1_16880 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CC1_24570 purine hydroxylase delta subunit apoprotein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CC1_17680 selenium-dependent molybdenum hydroxylase 1 K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7]
D CC1_03140 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CC1_30920 NADPH:quinone reductase and related Zn-dependent oxidoreductases K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CC1_09940 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CC1_10620 Ferredoxin K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D CC1_10630 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D CC1_10640 hydrogenases, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D CC1_15900 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CC1_14140 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CC1_25480 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CC1_23420 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CC1_16660 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D CC1_14720 Predicted N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CC1_26340 Acetyltransferase (GNAT) family. K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CC1_26410 Acetyltransferase (GNAT) family. K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CC1_07260 NCAIR mutase (PurE)-related proteins K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CC1_23070 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CC1_15600 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CC1_07220 Sugar kinases, ribokinase family K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D CC1_03860 Uncharacterized protein conserved in bacteria K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CC1_18560 Polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D CC1_04720 Reverse transcriptase (RNA-dependent DNA polymerase). K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CC1_31390 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CC1_14840 diguanylate cyclase (GGDEF) domain K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D CC1_32460 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CC1_14490 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CC1_01810 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CC1_34430 Arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CC1_23480 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CC1_03810 Predicted thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CC1_10810 Stage II sporulation protein E (SpoIIE). K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CC1_04250 Capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CC1_24840 Predicted metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CC1_23570 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D CC1_15200 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CC1_05210 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CC1_25080 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CC1_27250 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CC1_32590 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CC1_33480 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CC1_24710 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CC1_29640 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CC1_22950 MoxR-like ATPases K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CC1_27180 Myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D CC1_19190 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CC1_06290 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CC1_07280 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CC1_07270 conserved hypothetical protein TIGR00299 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CC1_15800 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CC1_06400 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CC1_14460 Predicted ATP-grasp enzyme K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D CC1_16300 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CC1_16290 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CC1_16340 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CC1_17690 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CC1_00470 copper-(or silver)-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CC1_01400 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CC1_02680 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CC1_32230 ATPase, P-type (transporting), HAD superfamily, subfamily IC K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CC1_03080 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D CC1_01860 Phosphotransferase System HPr (HPr) Family K11184 chr; catabolite repression HPr-like protein
D CC1_23680 PTS HPr component phosphorylation site. K11184 chr; catabolite repression HPr-like protein
D CC1_07180 Predicted phosphosugar isomerases K19510 gfrF; fructoselysine-6-phosphate deglycase
C 99982 Energy metabolism
D CC1_16310 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CC1_16320 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CC1_16330 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CC1_18610 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins
D CC1_33980 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D CC1_26690 Nitrogenase molybdenum-iron protein, alpha and beta chains K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CC1_15630 hypothetical protein K02574 napH; ferredoxin-type protein NapH
D CC1_33370 hypothetical protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
D CC1_32610 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
D CC1_06710 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D CC1_25470 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D CC1_05910 Ethanolamine utilization protein K04026 eutL; ethanolamine utilization protein EutL
D CC1_06000 ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP
D CC1_05990 Ethanolamine utilization protein K04031 eutS; ethanolamine utilization protein EutS
D CC1_18170 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D CC1_18250 Predicted unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CC1_32740 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D CC1_16110 Transcriptional accessory protein K06959 tex; protein Tex
D CC1_23510 Uncharacterized protein conserved in bacteria K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D CC1_01010 Predicted exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D CC1_34420 Uncharacterized protein with conserved CXXC pairs K19411 mcsA; protein arginine kinase activator
D CC1_00890 trigger factor K03545 tig; trigger factor
D CC1_00960 trigger factor K03545 tig; trigger factor
D CC1_18690 SsrA-binding protein K03664 smpB; SsrA-binding protein
D CC1_26730 Hydrogenase maturation factor K04654 hypD; hydrogenase expression/formation protein HypD
D CC1_26740 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CC1_11320 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D CC1_26710 [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CC1_22820 Predicted ATPase with chaperone activity K07391 comM; magnesium chelatase family protein
D CC1_18750 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D CC1_15260 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D CC1_20960 Predicted double-stranded RNA/RNA-DNA hybrid binding protein K06993 K06993; ribonuclease H-related protein
D CC1_18030 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC
D CC1_17430 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D CC1_10400 Predicted endonuclease containing a URI domain K07461 K07461; putative endonuclease
D CC1_22800 DNA protecting protein DprA K04096 smf; DNA processing protein
D CC1_12820 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase
D CC1_31460 Transposase. K07483 K07483; transposase
D CC1_04530 Transposase and inactivated derivatives K07484 K07484; transposase
D CC1_04520 Transposase and inactivated derivatives K07484 K07484; transposase
D CC1_21990 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
D CC1_22200 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
D CC1_20600 Transposase and inactivated derivatives K07493 K07493; putative transposase
D CC1_10850 transposase, IS605 OrfB family, central region K07496 K07496; putative transposase
D CC1_31530 Site-specific recombinase XerD K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D CC1_28670 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CC1_07900 citrate transporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CC1_22870 citrate transporter, CitMHS family K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CC1_04140 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D CC1_11570 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CC1_23980 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CC1_30720 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CC1_08060 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CC1_03950 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CC1_27560 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CC1_15750 Di-and tricarboxylate transporters K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D CC1_04920 Predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D CC1_14500 anti-anti-sigma factor K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CC1_23800 Stage II sporulation protein P (SpoIIP). K06385 spoIIP; stage II sporulation protein P
D CC1_01020 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CC1_01040 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CC1_01050 Stage III sporulation protein AC/AD protein family. K06393 spoIIIAD; stage III sporulation protein AD
D CC1_01060 Stage III sporulation protein AE (spore_III_AE). K06394 spoIIIAE; stage III sporulation protein AE
D CC1_01080 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D CC1_17500 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CC1_02210 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CC1_12050 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CC1_26020 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CC1_19830 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D CC1_14470 Stage V sporulation protein AA. K06403 spoVAA; stage V sporulation protein AA
D CC1_14280 hypothetical protein K06404 spoVAB; stage V sporulation protein AB
D CC1_14270 SpoVA protein. K06405 spoVAC; stage V sporulation protein AC
D CC1_00710 Stage V sporulation protein AD (SpoVAD). K06406 spoVAD; stage V sporulation protein AD
D CC1_00860 SpoVA protein. K06407 spoVAE; stage V sporulation protein AE
D CC1_00920 Small, acid-soluble spore proteins, alpha/beta type. K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D CC1_17800 Putative stage IV sporulation protein YqfD. K06438 yqfD; similar to stage IV sporulation protein
D CC1_23850 Sporulation and spore germination. K06298 gerM; germination protein M
D CC1_12650 Bacillus/Clostridium GerA spore germination protein. K06310 yndD; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D CC1_25300 Carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein
D CC1_33640 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CC1_18820 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D CC1_17810 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D CC1_19570 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D CC1_05980 Carbon dioxide concentrating mechanism/carboxysome shell protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D CC1_07660 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D CC1_31510 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CC1_01220 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 K07025; putative hydrolase of the HAD superfamily
D CC1_33960 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 sufD; Fe-S cluster assembly protein SufD
D CC1_15020 Predicted metal-dependent hydrolase with the TIM-barrel fold K07048 PTER; phosphotriesterase-related protein
D CC1_19880 Predicted membrane protein K07058 K07058; membrane protein
D CC1_21080 Uncharacterized conserved protein K03744 lemA; LemA protein
D CC1_07970 X-X-X-Leu-X-X-Gly heptad repeats K01421 yhgE; putative membrane protein
D CC1_10180 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D CC1_10190 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D CC1_03510 AroM protein. K14591 aroM; protein AroM
C 99997 Function unknown
D CC1_05640 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D CC1_02880 Prolyl oligopeptidase family. K06889 K06889; uncharacterized protein
D CC1_09900 hypothetical protein K06889 K06889; uncharacterized protein
D CC1_30340 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D CC1_00690 Predicted ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein
D CC1_33410 Predicted DNA-binding proteins K06933 K06933; uncharacterized protein
D CC1_01420 Uncharacterised protein family (UPF0153). K06940 K06940; uncharacterized protein
D CC1_21620 Predicted Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D CC1_06350 uncharacterized domain HDIG K06950 K06950; uncharacterized protein
D CC1_19080 HD domain. K06950 K06950; uncharacterized protein
D CC1_16490 uncharacterized domain HDIG K06950 K06950; uncharacterized protein
D CC1_17360 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D CC1_25060 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D CC1_06950 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D CC1_11180 Predicted membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D CC1_15740 Predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein
D CC1_06380 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CC1_13200 Predicted permeases K07090 K07090; uncharacterized protein
D CC1_13330 Predicted permeases K07090 K07090; uncharacterized protein
D CC1_27730 Predicted permeases K07090 K07090; uncharacterized protein
D CC1_14690 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CC1_18290 Predicted phosphohydrolases K07098 K07098; uncharacterized protein
D CC1_11190 Predicted small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein
D CC1_05310 Predicted small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein
D CC1_15500 Sel1 repeat. K07126 K07126; uncharacterized protein
D CC1_02590 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CC1_05750 hypothetical protein K07133 K07133; uncharacterized protein
D CC1_06890 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CC1_04670 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CC1_30480 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CC1_26450 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D CC1_07710 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D CC1_17860 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D CC1_18150 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D CC1_32890 Predicted membrane protein K07149 K07149; uncharacterized protein
D CC1_00610 Predicted membrane protein K07149 K07149; uncharacterized protein
D CC1_10650 Predicted membrane protein K07149 K07149; uncharacterized protein
D CC1_26960 Predicted membrane protein K07149 K07149; uncharacterized protein
D CC1_23960 Uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein
D CC1_04900 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D CC1_20460 Uncharacterized conserved protein K09117 K09117; uncharacterized protein
D CC1_27780 Uncharacterized conserved protein K09155 K09155; uncharacterized protein
D CC1_18830 Uncharacterized conserved protein K09157 K09157; uncharacterized protein
D CC1_10030 Uncharacterized conserved protein K09384 K09384; uncharacterized protein
D CC1_26670 Uncharacterized conserved protein K09706 K09706; uncharacterized protein
D CC1_22570 Uncharacterized protein conserved in bacteria K09768 K09768; uncharacterized protein
D CC1_29540 Uncharacterized protein conserved in bacteria K09768 K09768; uncharacterized protein
D CC1_18140 Uncharacterized conserved protein K09779 K09779; uncharacterized protein
D CC1_17330 Uncharacterized protein conserved in bacteria K09787 K09787; uncharacterized protein
D CC1_09230 Uncharacterized protein conserved in bacteria K09790 K09790; uncharacterized protein
D CC1_29110 Uncharacterized protein conserved in bacteria K09790 K09790; uncharacterized protein
D CC1_16040 Uncharacterized protein conserved in bacteria K00243 K00243; uncharacterized protein
D CC1_09950 Uncharacterized protein conserved in bacteria K09861 K09861; uncharacterized protein
D CC1_02970 Uncharacterized conserved protein K01163 K01163; uncharacterized protein
D CC1_20440 Uncharacterized conserved protein K01163 K01163; uncharacterized protein
D CC1_18480 hypothetical protein K07502 yprB; uncharacterized protein
D CC1_18960 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D CC1_29960 Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 9, 2024