+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Corvus cornix (hooded crow)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 104694144 NOP58; nucleolar protein 58 K14565 NOP58; nucleolar protein 58 D 104692300 NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D 104696539 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D 104695556 ZNHIT6; box C/D snoRNA protein 1 K27833 ZNHIT6; box C/D snoRNA protein 1 C Box H/ACA snoRNPs D 104691744 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 104697129 GAR1; H/ACA ribonucleoprotein complex subunit 1 isoform X1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 104689656 NHP2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 104690522 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 104683375 SHQ1; protein SHQ1 homolog isoform X1 K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 120411638 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 104683815 MPHOSPH10; LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 104696367 RRP7A; ribosomal RNA-processing protein 7 homolog A isoform X1 K14545 RRP7; ribosomal RNA-processing protein 7 D 104686248 PWP2; periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 104690772 NOP14; nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 104696820 UTP3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 104691946 UTP4; U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 104685717 WDR43; WD repeat-containing protein 43 isoform X1 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 104694351 UTP6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 104684283 HEATR1; HEAT repeat-containing protein 1 isoform X2 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 104687211 WDR3; WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 104684999 TBL3; transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 104691694 UTP14A; LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 104685143 UTP15; U3 small nucleolar RNA-associated protein 15 homolog isoform X1 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 120409834 NOL7; nucleolar protein 7 K27687 NOL7; U3 small nucleolar RNA-associated protein NOL7 D 104694130 WDR75; WD repeat-containing protein 75 isoform X1 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 104694357 UTP18; LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 104688629 NOC4L; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 104696413 UTP20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 104693207 WDR36; WD repeat-containing protein 36 isoform X2 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 104694817 NOL6; nucleolar protein 6 isoform X1 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 104692679 UTP23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 104688569 FCF1; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 104685658 UTP25; digestive organ expansion factor homolog isoform X1 K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 104684977 RSL1D1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 104690103 DDX10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 104694056 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 104696385 DDX47; probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 104697424 DDX49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 104690980 DDX52; probable ATP-dependent RNA helicase DDX52 isoform X1 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 104690894 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 104688842 DHX37; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX37 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 104696659 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 104690243 BMS1; ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 104689835 DROSHA; LOW QUALITY PROTEIN: ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 104688483 REXO4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 104696727 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 104687702 CSNK2A1; casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 104691894 CSNK2A2; casein kinase II subunit alpha' K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] C Other 90S particles D 104690986 AATF; protein AATF K14782 AATF; protein AATF/BFR2 D 104687030 CMSS1; protein CMSS1 isoform X2 K14784 CMS1; protein CMS1 D 104687228 EMG1; LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 120412247 KRI1; protein KRI1 homolog K14786 KRI1; protein KRI1 D 104698476 KRR1; KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 104695042 RBM19; probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 104697616 NAT10; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 104687955 NCL; nucleolin K11294 NCL; nucleolin D 104685507 NOL10; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 104696880 PINX1; PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1 K11135 PINX1; Pin2-interacting protein X1 D 104696255 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 104685172 RCL1; RNA 3'-terminal phosphate cyclase-like protein isoform X1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 104695459 PDCD11; protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 104683456 RRP9; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9 D 104697897 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 120411792 RRP36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 104689693 TCOF1; LOW QUALITY PROTEIN: treacle protein K14562 TCOF1; Treacher Collins syndrome protein D 104692884 DCAF13; DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 104691379 RIOK1; serine/threonine-protein kinase RIO1 isoform X4 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 104698009 RIOK2; serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D 109145205 LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 104686774 DIMT1; probable dimethyladenosine transferase isoform X2 K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 104691141 BUD23; probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 104693895 METTL5; rRNA N6-adenosine-methyltransferase METTL5 isoform X3 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 104692369 BYSL; bystin K14797 ENP1; essential nuclear protein 1 D 104689775 LTV1; protein LTV1 homolog K14798 LTV1; protein LTV1 D 120410591 NOB1; LOW QUALITY PROTEIN: RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 104696603 PNO1; RNA-binding protein PNO1 K11884 PNO1; RNA-binding protein PNO1 D 104688747 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 104695823 AK6; adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 104691203 TSR1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 104685074 TSR3; 18S rRNA aminocarboxypropyltransferase K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 104684320 PDCD2; programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 104687532 PDCD2L; programmed cell death protein 2-like isoform X1 K14801 TSR4; pre-rRNA-processing protein TSR4 D 120411964 RPS19BP1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1 D 104691510 XPO1; exportin-1 K14290 XPO1; exportin-1 D 104685260 TNPO1; transportin-1 K18752 TNPO1; transportin-1 D 104685973 IPO5; importin-5 K20222 IPO5; importin-5 D 104691029 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7 D 104692571 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9 C Other pre-40S particles D 104689880 ATP8A2; phospholipid-transporting ATPase IB K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 104690658 ATP8A1; phospholipid-transporting ATPase IA isoform X4 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 104683865 EIF3J; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 104697231 ABCE1; LOW QUALITY PROTEIN: ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 104694236 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 104694056 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 104690230 nucleolar RNA helicase 2-like K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 104690231 nucleolar RNA helicase 2-like K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 104686212 DDX24; ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 104687866 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 104688318 DDX31; probable ATP-dependent RNA helicase DDX31 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 104688766 DDX51; ATP-dependent RNA helicase DDX51 isoform X1 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 104695045 DDX54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 104688726 DDX55; ATP-dependent RNA helicase DDX55 isoform X1 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 104686770 MTREX; exosome RNA helicase MTR4 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 104683439 GNL3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein D 120412195 LOW QUALITY PROTEIN: guanine nucleotide-binding protein-like 3-like protein K14538 NUG1; nuclear GTP-binding protein D 104686524 GTPBP4; nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 104693504 LSG1; large subunit GTPase 1 homolog isoform X2 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 104683958 EFL1; elongation factor-like GTPase 1 isoform X1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 104692055 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D 104684874 REXO5; RNA exonuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 104696948 REXO1; LOW QUALITY PROTEIN: RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 104693453 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D 104691474 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 104692728 POP1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 104687437 POP4; ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 104688757 POP5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 104697924 RPP30; ribonuclease P protein subunit p30 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 104686555 RPP25L; ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 104697441 RPP25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 104689203 RPP38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] E 104696793 RPP40; ribonuclease P protein subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 104693275 NOL9; polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 104684259 ABCF2; LOW QUALITY PROTEIN: ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 104686755 DNAJC21; dnaJ homolog subfamily C member 21 isoform X1 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 104683789 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D 104692112 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 104687127 HSPA2; heat shock-related 70 kDa protein 2 K26598 HSPA2; heat shock 70kDa protein 2 D 104697567 MRTO4; mRNA turnover protein 4 homolog isoform X1 K14815 MRT4; mRNA turnover protein 4 D 104688068 NMD3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 104694455 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D 104688747 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 104689853 ZNF622; zinc finger protein 622 K14816 REI1; pre-60S factor REI1 D 104695797 SBDS; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 104693714 SPATA5; ATPase family protein 2 homolog isoform X1 K14575 AFG2; AAA family ATPase D 104684106 SPATA5L1; spermatogenesis-associated protein 5-like protein 1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 104686649 cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein D 104691510 XPO1; exportin-1 K14290 XPO1; exportin-1 D 104685260 TNPO1; transportin-1 K18752 TNPO1; transportin-1 D 104685973 IPO5; importin-5 K20222 IPO5; importin-5 D 104691029 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7 D 104692571 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9 D 104687210 DUSP12; dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 104685822 TEX10; testis-expressed protein 10 isoform X1 K14827 IPI1; pre-rRNA-processing protein IPI1 D 104697055 WDR18; LOW QUALITY PROTEIN: WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3 D 104691335 LAS1L; ribosomal biogenesis protein LAS1L K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D 104686986 LTN1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 104691855 TCF25; transcription factor 25 K24970 TCF25; transcription factor 25 D 104695890 NEMF; nuclear export mediator factor NEMF isoform X1 K24971 NEMF; nuclear export mediator factor NEMF D 104686563 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 104696017 NPLOC4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4 D 104688611 UFD1; ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2 K14016 UFD1; ubiquitin fusion degradation protein 1 D 104693951 ANKZF1; LOW QUALITY PROTEIN: ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 104686599 BRIX1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 104695547 EBNA1BP2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 104695344 TMED5; transmembrane emp24 domain-containing protein 5 K14825 TMED5; p24 family protein gamma-2 D 104691408 PAK1IP1; p21-activated protein kinase-interacting protein 1 isoform X1 K14830 MAK11; protein MAK11 D 104694891 MAK16; protein MAK16 homolog K14831 MAK16; protein MAK16 D 104684471 CEBPZ; LOW QUALITY PROTEIN: CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 104694243 MDN1; midasin isoform X1 K14572 MDN1; midasin D 104691950 NIP7; LOW QUALITY PROTEIN: 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 104693407 NOC2L; nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 104697920 NOC3L; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 104687116 NOP2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 120411861 RBM28; RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 104683188 NOL8; nucleolar protein 8 isoform X3 K14836 NOP8; nucleolar protein 8 D 104684445 RBM34; RNA-binding protein 34 K14837 NOP12; nucleolar protein 12 D 104694008 NIFK; LOW QUALITY PROTEIN: MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 104685256 NSA2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 104694981 PES1; pescadillo homolog K14843 PES1; pescadillo D 104685157 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 D 104696255 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 104688287 RIOX1; LOW QUALITY PROTEIN: ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 104689381 RIOX2; ribosomal oxygenase 2 isoform X1 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 104685557 NVL; nuclear valosin-containing protein-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase D 104695551 RPF1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 104691365 RPF2; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 104686253 RRP1B; ribosomal RNA processing protein 1 homolog B K14849 RRP1; ribosomal RNA-processing protein 1 D 104697897 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 104696514 NOL12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 120409787 RRS1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 104691022 NLE1; notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4 D 104696858 SDAD1; protein SDA1 homolog K14856 SDA1; protein SDA1 D 104698507 FTSJ3; pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 104690525 TMA16; translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16 D 104684198 URB1; nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 104684308 URB2; unhealthy ribosome biogenesis protein 2 homolog K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 104693789 WDR12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein D 104693162 NUFIP1; LOW QUALITY PROTEIN: nuclear fragile X mental retardation-interacting protein 1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 104690991 ZNHIT3; zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 104694964 BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1 C 104690735 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein C 104695531 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 104695811 NSUN5; 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 104690002 TFB1M; dimethyladenosine transferase 1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 104690987 MRM1; rRNA methyltransferase 1, mitochondrial K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 104698301 BMT2; S-adenosylmethionine sensor upstream of mTORC1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 104691174 MRM3; rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 104690891 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 104687555 DDX28; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 104691122 DHX33; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 104684535 IGHMBP2; DNA-binding protein SMUBP-2 isoform X1 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 104685073 KDM8; bifunctional peptidase and arginyl-hydroxylase JMJD5 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 104691255 PHF6; PHD finger protein 6 isoform X1 K23310 PHF6; PHD finger protein 6 C 104691192 ERAL1; GTPase Era, mitochondrial K03595 era; GTPase C 104696501 NOPCHAP1; uncharacterized protein C12orf45 homolog K26142 NOPCHAP1; NOP protein chaperone 1 C 104695098 MTG1; mitochondrial ribosome-associated GTPase 1 isoform X1 K19828 MTG1; mitochondrial GTPase 1 C 104687813 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] C 104697211 NOA1; LOW QUALITY PROTEIN: nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1 # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 104688331 RPL7A; 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 104691744 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 104684818 MRM2; rRNA methyltransferase 2, mitochondrial isoform X3 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 104689835 DROSHA; LOW QUALITY PROTEIN: ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 104691192 ERAL1; GTPase Era, mitochondrial K03595 era; GTPase C 104687813 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions D 120411038 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 120411045 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 120411094 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12 D 120411184 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13 D 120411255 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 120411256 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 120411257 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 120411670 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15 D 120411645 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15 D 120412057 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17 D 120412058 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17 D 120410569 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 120410570 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 120410424 small nucleolar RNA SNORD21 K26293 SNORD21; small nucleolar RNA SNORD21 D 120410933 small nucleolar RNA SNORD24 K14867 SNORD24; small nucleolar RNA SNORD24 D 120410425 small nucleolar RNA SNORD24 K14867 SNORD24; small nucleolar RNA SNORD24 D 120411646 small nucleolar RNA SNORD35 K14899 SNORD35; small nucleolar RNA SNORD35 D 120411647 small nucleolar RNA SNORD35 K14899 SNORD35; small nucleolar RNA SNORD35 D 120410926 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 120410932 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 120410429 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38 D 120410428 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38 D 120410935 small nucleolar RNA SNORD62 K14919 SNORD62; small nucleolar RNA SNORD62 D 120410996 small nucleolar RNA SNORD104 K14904 SNORD104; small nucleolar RNA SNORD104 C SnoRNAs act as guides for 2'-O-ribose methylation D 120410995 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1 D 120410513 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2 D 120411047 small nucleolar RNA Z17 K27197 SNORD4; small nucleolar RNA SNORD4 D 120411666 small nucleolar RNA SNORD5 K27198 SNORD5; small nucleolar RNA SNORD5 D 120411652 small nucleolar RNA Z40 K27199 SNORD6; small nucleolar RNA SNORD6 D 120410342 small nucleolar RNA SNORD11B K14896 SNORD11; small nucleolar RNA SNORD11 D 120410341 small nucleolar RNA SNORD11 K14896 SNORD11; small nucleolar RNA SNORD11 D 120410571 small nucleolar RNA SNORD16 K14906 SNORD16; small nucleolar RNA SNORD16 D 120410707 small nucleolar RNA SNORD19 K14934 SNORD19; small nucleolar RNA SNORD19 D 120410708 small nucleolar RNA SNORD19 K14934 SNORD19; small nucleolar RNA SNORD19 D 120410505 small nucleolar RNA SNORD20 K27207 SNORD20; small nucleolar RNA SNORD20 D 120411462 small nucleolar RNA SNORD37 K27210 SNORD37; small nucleolar RNA SNORD37 D 120411046 small nucleolar RNA SNORD42 K14892 SNORD42; small nucleolar RNA SNORD42 D 120410431 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45 D 120412073 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45 D 120410430 small nucleolar RNA SNORD46 K14889 SNORD46; small nucleolar RNA SNORD46 D 120410432 small nucleolar RNA SNORD47 K14920 SNORD47; small nucleolar RNA SNORD47 D 120411048 small nucleolar RNA SNORD49 K26304 SNORD49; small nucleolar RNA SNORD49 D 120411820 small nucleolar RNA SNORD50 K26305 SNORD50; small nucleolar RNA SNORD50 D 120410340 small nucleolar RNA SNORD51 K14885 SNORD51; small nucleolar RNA SNORD51 D 120411821 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92 D 120411822 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92 D 120411823 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92 D 120409846 small nucleolar RNA U54 K26307 SNORD54; small nucleolar RNA SNORD54 D 120410427 small nucleolar RNA SNORD55/SNORD39 K26308 SNORD55; small nucleolar RNA SNORD55 D 120411577 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58 D 120411578 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58 D 120412062 small nucleolar RNA SNORD61 K26311 SNORD61; small nucleolar RNA SNORD61 D 120410773 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63 D 120411042 small nucleolar RNA SNORD65 K14903 SNORD65; small nucleolar RNA SNORD65 D 120410508 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66 D 120410510 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66 D 120410172 small nucleolar RNA SNORD67 K27212 SNORD67; small nucleolar RNA SNORD67 D 120410709 small nucleolar RNA SNORD69 K27214 SNORD69; small nucleolar RNA SNORD69 D 120410344 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70 D 120410345 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70 D 120410637 small nucleolar RNA SNORD71 K27216 SNORD71; small nucleolar RNA SNORD71 D 120409993 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73 D 120410434 small nucleolar RNA SNORD74 K14890 SNORD74; small nucleolar RNA SNORD74 D 120410439 small nucleolar RNA SNORD75 K26312 SNORD75; small nucleolar RNA SNORD75 D 120410435 small nucleolar RNA snR60/Z15/Z230/Z193/J17 K14886 SNORD77_80; small nucleolar RNA SNORD77/80 D 120410426 small nucleolar RNA SNORD79 K26314 SNORD79; small nucleolar RNA SNORD79 D 120410504 small nucleolar RNA SNORD82 K27133 SNORD82; small nucleolar RNA SNORD82 D 120412012 small nucleolar RNA U83B K27134 SNORD83; small nucleolar RNA SNORD83 D 120409841 small nucleolar RNA SNORD87 K27177 SNORD87 U87; small nucleolar RNA SNORD87 D 120411665 small nucleolar RNA SNORD89 K27178 SNORD89; small nucleolar RNA SNORD89 D 120410930 small nucleolar RNA SNORD90 K26474 SNORD90; small nucleolar RNA SNORD90 D 120411043 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91 D 120411044 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91 D 120409844 small nucleolar RNA SNORD93 K27114 SNORD93; small nucleolar RNA SNORD93 D 120409990 small nucleolar RNA SNORD94 K27115 SNORD94; small nucleolar RNA SNORD94 D 120410174 small nucleolar RNA SNORD97 K27118 SNORD97; small nucleolar RNA SNORD97 D 120410252 small nucleolar RNA SNORD98 K27119 SNORD98; small nucleolar RNA SNORD98 D 120411229 small nucleolar RNA SNORD99 K27120 SNORD99; small nucleolar RNA SNORD99 D 120411829 small nucleolar RNA SNORD100 K27121 SNORD100; small nucleolar RNA SNORD100 D 120411830 small nucleolar RNA SNORD100 K27121 SNORD100; small nucleolar RNA SNORD100 D 120411819 small nucleolar RNA SNORD101 K27122 SNORD101; small nucleolar RNA SNORD101 D 120411227 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103 D 120410638 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111 D 120412056 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117 D 120412060 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117 D 120409845 small nucleolar RNA SNORD123 K27138 SNORD123; small nucleolar RNA SNORD123 D 120410173 small nucleolar RNA SNORD127 K27142 SNORD127; small nucleolar RNA SNORD127 B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions D 120411230 small nucleolar RNA SNORA16B/SNORA16A family K14927 SNORA16; small nucleolar RNA SNORA16 D 120410998 small nucleolar RNA SNORA76 K14928 SNORA50_76; small nucleolar RNA SNORA50/76 D 120410636 small nucleolar RNA SNORA50 K14928 SNORA50_76; small nucleolar RNA SNORA50/76 D 120412011 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53 D 120410171 small nucleolar RNA SNORA54 K14931 SNORA54; small nucleolar RNA SNORA54 D 120410170 small nucleolar RNA SNORA54 K14931 SNORA54; small nucleolar RNA SNORA54 D 120410250 small nucleolar RNA SNORA74 K14932 SNORA74; small nucleolar RNA SNORA74 D 120410882 small nucleolar RNA SNORA77 K14935 SNORA77; small nucleolar RNA SNORA77 D 120410819 small nucleolar RNA ACA64 K14936 SNORA78; small nucleolar RNA SNORA78 C SnoRNAs act as guides for pseudouridynation D 120411657 small nucleolar RNA SNORA1 K14918 SNORA1; small nucleolar RNA SNORA1 D 120410177 small nucleolar RNA SNORA3/SNORA45 family K14914 SNORA3; small nucleolar RNA SNORA3 D 120410178 small nucleolar RNA SNORA3/SNORA45 family K14914 SNORA3; small nucleolar RNA SNORA3 D 120409837 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62 D 120409848 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62 D 120410706 small nucleolar RNA SNORA7 K26322 SNORA7; small nucleolar RNA SNORA7 D 120411653 small nucleolar RNA SNORA8 K26323 SNORA8; small nucleolar RNA SNORA8 D 120411654 small nucleolar RNA SNORA8 K26323 SNORA8; small nucleolar RNA SNORA8 D 120409840 small nucleolar RNA SNORA9 K26324 SNORA9; small nucleolar RNA SNORA9 D 120409839 small nucleolar RNA SNORA9 K26324 SNORA9; small nucleolar RNA SNORA9 D 120411575 small nucleolar RNA SNORA13 K14930 SNORA13; small nucleolar RNA SNORA13 D 120411825 small nucleolar RNA SNORA14 K14916 SNORA14; small nucleolar RNA SNORA14 D 120411040 small nucleolar RNA SNORA15 K26325 SNORA15; small nucleolar RNA SNORA15 D 120410929 small nucleolar RNA SNORA17 K26326 SNORA17_43; small nucleolar RNA SNORA17/43 D 120410928 small nucleolar RNA SNORA17 K26326 SNORA17_43; small nucleolar RNA SNORA17/43 D 120411660 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18 D 120410251 small nucleolar RNA SNORA19 K26328 SNORA19; small nucleolar RNA SNORA19 D 120411390 small nucleolar RNA SNORA21 K14909 SNORA21; small nucleolar RNA SNORA21 D 120411041 small nucleolar RNA SNORA22 K26329 SNORA22; small nucleolar RNA SNORA22 D 120410176 small nucleolar RNA SNORA23 K26330 SNORA23; small nucleolar RNA SNORA23 D 120409994 small nucleolar RNA SNORA24 K26331 SNORA24; small nucleolar RNA SNORA24 D 120411656 small nucleolar RNA SNORA25 K26332 SNORA25; small nucleolar RNA SNORA25 D 120411661 small nucleolar RNA SNORA27 K26333 SNORA27; small nucleolar RNA SNORA27 D 120410168 small nucleolar RNA SNORA28 K26334 SNORA28; small nucleolar RNA SNORA28 D 120411648 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31 D 120411651 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31 D 120412063 small nucleolar RNA SNORA36 family K26338 SNORA36; small nucleolar RNA SNORA36 D 120411663 small nucleolar RNA SNORA40 K14926 SNORA40; small nucleolar RNA SNORA40 D 120410343 small nucleolar RNA SNORA41 K26339 SNORA41; small nucleolar RNA SNORA41 D 120411231 small nucleolar RNA SNORA44 K26340 SNORA44; small nucleolar RNA SNORA44 D 120410635 small nucleolar RNA SNORA46 K26341 SNORA46; small nucleolar RNA SNORA46 D 120411576 small nucleolar RNA SNORA47 K27149 SNORA47; small nucleolar RNA SNORA47 D 120410169 small nucleolar RNA SNORA52 K14911 SNORA52; small nucleolar RNA SNORA52 D 120410566 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71 D 120411232 small nucleolar RNA SNORA61 K26345 SNORA61; small nucleolar RNA SNORA61 D 120410818 small nucleolar RNA SNORA64/SNORA10 family K14924 SNORA10_64; small nucleolar RNA SNORA10/64 D 120411579 small nucleolar RNA SNORA66 K26358 SNORA66; small nucleolar RNA SNORA66 D 120412010 small nucleolar RNA SNORA68 K26360 SNORA68; small nucleolar RNA SNORA68 D 120412061 small nucleolar RNA SNORA69 K26361 SNORA69; small nucleolar RNA SNORA69 D 120409838 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72 D 120410502 small nucleolar RNA SNORA75 K26363 SNORA75; small nucleolar RNA SNORA75 D 120410705 small nucleolar RNA SNORA84 K27151 SNORA84; small nucleolar RNA SNORA84 B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024