+D GENES KO
#
KEGG Orthology (KO) - Caldicellulosiruptor danielii
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cdan00010]
D SOJ16_000521 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D SOJ16_000599 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001822 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SOJ16_000601 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002183 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002516 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_001363 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOJ16_001364 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOJ16_001362 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SOJ16_001361 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOJ16_001222 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOJ16_001366 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SOJ16_000689 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D SOJ16_001048 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SOJ16_001049 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SOJ16_001911 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SOJ16_002353 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SOJ16_000339 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cdan00020]
D SOJ16_002340 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D SOJ16_000470 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D SOJ16_000485 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D SOJ16_000489 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SOJ16_000490 isocitrate/isopropylmalate dehydrogenase family protein K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_001048 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SOJ16_001049 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SOJ16_001050 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D SOJ16_001047 ferredoxin family protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D SOJ16_000462 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D SOJ16_000339 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D SOJ16_000689 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:cdan00030]
D SOJ16_000599 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D SOJ16_002159 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_002160 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_002456 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_001450 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SOJ16_000614 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SOJ16_001774 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SOJ16_001773 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SOJ16_000618 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOJ16_002512 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SOJ16_002511 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SOJ16_000815 aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D SOJ16_000601 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002183 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002516 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001822 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cdan00040]
D SOJ16_002519 pectinesterase family protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D SOJ16_002510 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D SOJ16_002509 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D SOJ16_002123 alpha-glucosidase/alpha-galactosidase K22933 lplD; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
D SOJ16_001360 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D SOJ16_000851 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D SOJ16_000850 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D SOJ16_002203 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D SOJ16_001099 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOJ16_002464 sugar phosphate isomerase/epimerase family protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SOJ16_002341 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SOJ16_002343 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D SOJ16_002180 FGGY-family carbohydrate kinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D SOJ16_000542 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D SOJ16_002517 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D SOJ16_000578 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D SOJ16_000835 rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D SOJ16_002175 NAD(P)-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_002182 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_000504 zinc-dependent alcohol dehydrogenase family protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_002325 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_002174 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D SOJ16_000679 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D SOJ16_002562 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cdan00051]
D SOJ16_001548 glycosyl hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D SOJ16_002235 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SOJ16_000599 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D SOJ16_000235 sugar phosphate nucleotidyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D SOJ16_001432 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOJ16_000341 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOJ16_002399 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SOJ16_002398 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D SOJ16_002174 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D SOJ16_000679 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D SOJ16_002562 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D SOJ16_000695 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D SOJ16_000835 rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001822 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SOJ16_000683 srlD; sorbitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D SOJ16_000147 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SOJ16_002175 NAD(P)-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_002182 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_000504 zinc-dependent alcohol dehydrogenase family protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_002325 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SOJ16_000578 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D SOJ16_000601 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002183 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002516 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_001363 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOJ16_000614 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SOJ16_000149 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:cdan00052]
D SOJ16_000920 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SOJ16_000919 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SOJ16_000921 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOJ16_001096 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOJ16_001099 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOJ16_000521 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D SOJ16_000852 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SOJ16_002504 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SOJ16_001920 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D SOJ16_001059 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D SOJ16_000418 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001822 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SOJ16_000412 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:cdan00053]
D SOJ16_002203 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D SOJ16_002464 sugar phosphate isomerase/epimerase family protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SOJ16_002341 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:cdan00500]
D SOJ16_000412 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SOJ16_001099 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOJ16_002479 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SOJ16_000394 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D SOJ16_000569 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_001856 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_000236 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_000327 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_001860 glycoside hydrolase family 48 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_000396 glycosyl transferase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D SOJ16_001627 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D SOJ16_000527 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SOJ16_000528 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SOJ16_000526 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D SOJ16_000529 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SOJ16_002558 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SOJ16_000588 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D SOJ16_000387 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D SOJ16_002573 alpha-amylase domain-containing protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SOJ16_002582 alpha-amylase family glycosyl hydrolase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SOJ16_002561 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D SOJ16_000232 glycoside hydrolase family 15 protein K01178 SGA1; glucoamylase [EC:3.2.1.3]
D SOJ16_000354 glycosyl hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D SOJ16_000521 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D SOJ16_000599 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D SOJ16_002235 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cdan00520]
D SOJ16_000087 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SOJ16_000395 glycosyl transferase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D SOJ16_000088 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SOJ16_002235 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SOJ16_002451 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOJ16_002452 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SOJ16_000617 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SOJ16_000612 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000774 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000203 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000295 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOJ16_001944 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SOJ16_001195 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D SOJ16_001817 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D SOJ16_001196 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D SOJ16_002463 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D SOJ16_001197 DapH/DapD/GlmU-related protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D SOJ16_001058 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D SOJ16_000193 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D SOJ16_000521 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D SOJ16_001099 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOJ16_000920 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SOJ16_000919 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SOJ16_000921 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOJ16_001096 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOJ16_000599 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D SOJ16_000235 sugar phosphate nucleotidyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D SOJ16_001432 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOJ16_000341 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOJ16_002399 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SOJ16_002398 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D SOJ16_001627 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D SOJ16_001625 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D SOJ16_000527 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SOJ16_000528 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cdan00620]
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D SOJ16_001048 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SOJ16_001049 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SOJ16_000689 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_002353 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SOJ16_001458 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOJ16_001459 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOJ16_001222 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOJ16_001911 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SOJ16_001947 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SOJ16_001014 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SOJ16_002434 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SOJ16_001276 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SOJ16_000462 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D SOJ16_000339 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D SOJ16_001366 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SOJ16_000454 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SOJ16_000456 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cdan00630]
D SOJ16_000489 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SOJ16_002514 gyaR; glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D SOJ16_000625 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOJ16_001012 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_002172 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SOJ16_002512 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SOJ16_000548 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
C 00640 Propanoate metabolism [PATH:cdan00640]
D SOJ16_001458 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOJ16_001459 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOJ16_000693 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D SOJ16_001911 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SOJ16_001266 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:cdan00650]
D SOJ16_001275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SOJ16_002432 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SOJ16_002433 OadG family protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D SOJ16_001048 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SOJ16_001049 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SOJ16_000648 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000451 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000452 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cdan00660]
D SOJ16_000648 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000451 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000452 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOJ16_002216 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SOJ16_002215 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SOJ16_002214 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D SOJ16_001363 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cdan00190]
D SOJ16_001384 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SOJ16_001382 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SOJ16_001383 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SOJ16_001385 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SOJ16_001381 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SOJ16_001388 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOJ16_001386 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SOJ16_001387 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cdan00710]
D SOJ16_001363 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOJ16_001364 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOJ16_000601 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002183 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002516 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002159 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_002160 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_002456 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_000614 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SOJ16_001450 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SOJ16_001366 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:cdan00720]
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D SOJ16_001366 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SOJ16_000462 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D SOJ16_002198 FAD-binding protein K18209 tfrA; fumarate reductase (CoM/CoB) subunit A [EC:1.3.4.1]
D SOJ16_001048 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SOJ16_001049 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SOJ16_001050 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D SOJ16_001047 ferredoxin family protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D SOJ16_000489 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SOJ16_002327 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SOJ16_000945 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SOJ16_002586 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D SOJ16_002493 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D SOJ16_000814 4Fe-4S binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D SOJ16_001459 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOJ16_001458 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:cdan00680]
D SOJ16_002586 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D SOJ16_002493 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D SOJ16_000814 4Fe-4S binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D SOJ16_001012 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOJ16_001361 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOJ16_000601 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002183 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_002516 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001822 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SOJ16_000275 FmdE family protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D SOJ16_001458 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOJ16_001459 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D SOJ16_001362 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SOJ16_002240 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOJ16_001279 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D SOJ16_000281 2-phosphosulfolactate phosphatase family protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D SOJ16_001452 RimK family alpha-L-glutamate ligase K14940 cofF; gamma-F420-2:alpha-L-glutamate ligase [EC:6.3.2.32]
C 00910 Nitrogen metabolism [PATH:cdan00910]
D SOJ16_000478 nitrogenase component I subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D SOJ16_000475 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D SOJ16_001122 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D SOJ16_000625 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOJ16_000626 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:cdan00920]
D SOJ16_001132 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOJ16_001134 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D SOJ16_001133 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SOJ16_001144 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOJ16_001143 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOJ16_001005 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SOJ16_001141 adenylyl-sulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D SOJ16_001142 ferredoxin family protein K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D SOJ16_001146 asrA; anaerobic sulfite reductase subunit AsrA K16950 asrA; anaerobic sulfite reductase subunit A
D SOJ16_001147 asrB; anaerobic sulfite reductase subunit AsrB K16951 asrB; anaerobic sulfite reductase subunit B
D SOJ16_001148 asrC; sulfite reductase subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D SOJ16_001138 4Fe-4S binding protein K00385 asrC; anaerobic sulfite reductase subunit C
D SOJ16_002362 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SOJ16_001113 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOJ16_001582 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOJ16_001073 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cdan00061]
D SOJ16_001105 acyl carrier protein K02078 acpP; acyl carrier protein
D SOJ16_001103 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOJ16_001102 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOJ16_001106 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOJ16_001104 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOJ16_002147 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D SOJ16_002353 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cdan00561]
D SOJ16_002172 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SOJ16_001101 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SOJ16_000739 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_002301 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_000173 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_001283 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOJ16_001231 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SOJ16_001794 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SOJ16_001059 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D SOJ16_000418 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:cdan00564]
D SOJ16_000911 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SOJ16_000739 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_002301 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_000173 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_001283 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOJ16_001231 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SOJ16_001811 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SOJ16_000947 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SOJ16_001417 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D SOJ16_000795 iron-containing alcohol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cdan00600]
D SOJ16_000094 glycoside hydrolase family 30 protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D SOJ16_000852 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SOJ16_002504 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SOJ16_001059 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D SOJ16_000418 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SOJ16_000087 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cdan00230]
D SOJ16_001300 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SOJ16_001773 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SOJ16_000618 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOJ16_001405 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SOJ16_001401 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SOJ16_001403 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SOJ16_001406 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D SOJ16_001408 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D SOJ16_001407 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SOJ16_001404 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SOJ16_001126 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SOJ16_001127 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SOJ16_001409 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SOJ16_001077 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SOJ16_001402 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SOJ16_001950 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SOJ16_001772 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SOJ16_001449 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SOJ16_000623 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SOJ16_001607 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SOJ16_000832 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SOJ16_001389 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOJ16_000987 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SOJ16_000516 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SOJ16_000701 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D SOJ16_001949 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SOJ16_000045 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SOJ16_000952 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SOJ16_001722 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOJ16_000629 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOJ16_001144 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOJ16_001143 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cdan00240]
D SOJ16_001330 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOJ16_001517 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOJ16_001516 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOJ16_001327 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SOJ16_001328 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SOJ16_001332 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D SOJ16_001331 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D SOJ16_002199 4Fe-4S binding protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SOJ16_001334 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SOJ16_001329 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SOJ16_001814 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SOJ16_000629 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOJ16_001257 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SOJ16_000067 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SOJ16_001282 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SOJ16_000498 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SOJ16_000615 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOJ16_001325 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOJ16_000952 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SOJ16_001775 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SOJ16_001777 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SOJ16_000516 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SOJ16_000616 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SOJ16_000464 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SOJ16_001375 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SOJ16_002144 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cdan00250]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_001170 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SOJ16_001515 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOJ16_000437 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D SOJ16_001206 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOJ16_001205 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOJ16_000045 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SOJ16_001077 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SOJ16_001327 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SOJ16_000626 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SOJ16_000625 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOJ16_001330 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOJ16_001517 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOJ16_001516 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOJ16_001407 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SOJ16_002451 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOJ16_001405 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cdan00260]
D SOJ16_001960 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOJ16_001082 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOJ16_001958 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SOJ16_001959 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SOJ16_000637 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SOJ16_001012 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOJ16_002172 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SOJ16_001362 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SOJ16_002240 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOJ16_001279 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D SOJ16_002326 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_001668 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SOJ16_001669 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cdan00270]
D SOJ16_002362 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SOJ16_001113 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOJ16_001582 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOJ16_000736 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOJ16_000301 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SOJ16_002537 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SOJ16_000670 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOJ16_002237 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SOJ16_001271 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SOJ16_001320 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D SOJ16_001782 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D SOJ16_001449 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SOJ16_000883 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D SOJ16_001319 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D SOJ16_000882 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOJ16_001960 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOJ16_001082 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOJ16_001958 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SOJ16_001073 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SOJ16_001072 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SOJ16_001140 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SOJ16_000646 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_001911 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SOJ16_002240 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cdan00280]
D SOJ16_000646 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOJ16_000693 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cdan00290]
D SOJ16_002216 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SOJ16_002215 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SOJ16_002214 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SOJ16_000648 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000451 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000452 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOJ16_000453 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOJ16_000647 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SOJ16_000646 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOJ16_000454 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SOJ16_000456 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cdan00300]
D SOJ16_001958 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SOJ16_001960 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOJ16_001082 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOJ16_001081 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SOJ16_001080 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SOJ16_001835 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOJ16_000370 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SOJ16_002231 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SOJ16_000514 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D SOJ16_000783 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SOJ16_000768 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOJ16_000769 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:cdan00220]
D SOJ16_001518 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SOJ16_001206 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOJ16_001205 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOJ16_001407 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SOJ16_000625 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOJ16_001330 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOJ16_001517 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOJ16_001516 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_002317 GNAT family N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D SOJ16_001030 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SOJ16_001031 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SOJ16_001835 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cdan00330]
D SOJ16_002150 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D SOJ16_001272 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D SOJ16_001271 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SOJ16_002237 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SOJ16_001297 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SOJ16_001613 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SOJ16_001612 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cdan00340]
D SOJ16_001440 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SOJ16_001441 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D SOJ16_001433 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D SOJ16_001435 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SOJ16_001436 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SOJ16_001434 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SOJ16_001437 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SOJ16_000841 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001438 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001694 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D SOJ16_001439 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cdan00350]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_000841 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001438 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_002353 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:cdan00360]
D SOJ16_000975 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D SOJ16_001471 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D SOJ16_001474 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_000841 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001438 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_002115 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
C 00380 Tryptophan metabolism [PATH:cdan00380]
D SOJ16_000548 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cdan00400]
D SOJ16_000840 hypothetical protein K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SOJ16_001308 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SOJ16_001676 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SOJ16_001678 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SOJ16_000837 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SOJ16_001235 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SOJ16_001674 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SOJ16_001673 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SOJ16_001672 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SOJ16_001670 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SOJ16_001671 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SOJ16_001668 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SOJ16_001669 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SOJ16_001281 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D SOJ16_001957 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D SOJ16_000838 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SOJ16_000877 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_000841 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001438 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cdan00410]
D SOJ16_001970 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SOJ16_001971 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cdan00430]
D SOJ16_001459 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOJ16_001458 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cdan00450]
D SOJ16_000736 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOJ16_000301 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SOJ16_002537 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SOJ16_002619 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SOJ16_001144 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOJ16_001143 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOJ16_000283 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cdan00460]
D SOJ16_002479 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SOJ16_000394 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D SOJ16_001012 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cdan00470]
D SOJ16_001897 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SOJ16_002139 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOJ16_001407 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SOJ16_002138 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SOJ16_000771 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOJ16_002588 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D SOJ16_002231 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SOJ16_000783 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cdan00480]
D SOJ16_001271 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cdan00515]
D SOJ16_001855 glycosyltransferase family 39 protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cdan00514]
D SOJ16_001855 glycosyltransferase family 39 protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cdan00511]
D SOJ16_000852 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SOJ16_002504 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SOJ16_000087 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SOJ16_000231 glycoside hydrolase family 2 TIM barrel-domain containing protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D SOJ16_002173 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D SOJ16_002185 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D SOJ16_000094 glycoside hydrolase family 30 protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:cdan00540]
D SOJ16_001198 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cdan00541]
D SOJ16_001099 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOJ16_000921 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOJ16_001096 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOJ16_001628 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SOJ16_001627 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D SOJ16_001625 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D SOJ16_001432 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOJ16_000341 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOJ16_002399 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SOJ16_002398 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D SOJ16_000617 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SOJ16_001944 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SOJ16_001195 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D SOJ16_001817 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D SOJ16_001196 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D SOJ16_002463 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D SOJ16_001197 DapH/DapD/GlmU-related protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:cdan00550]
D SOJ16_000612 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000774 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000203 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000295 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOJ16_002527 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SOJ16_000771 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOJ16_000768 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOJ16_002139 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOJ16_000769 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SOJ16_001812 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOJ16_001832 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SOJ16_000770 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOJ16_000773 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SOJ16_002655 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOJ16_001261 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOJ16_000767 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D SOJ16_001212 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001236 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001536 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001785 MurT ligase domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SOJ16_001784 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cdan00552]
D SOJ16_001832 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SOJ16_002396 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SOJ16_001201 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SOJ16_001209 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SOJ16_001794 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cdan00543]
D SOJ16_002362 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cdan00730]
D SOJ16_000323 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SOJ16_000324 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SOJ16_000321 thiF; sulfur carrier protein ThiS adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D SOJ16_001523 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001697 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001522 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SOJ16_000176 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D SOJ16_000320 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D SOJ16_001245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SOJ16_000319 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SOJ16_000322 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SOJ16_000998 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SOJ16_002745 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SOJ16_001805 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SOJ16_001722 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cdan00740]
D SOJ16_000535 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SOJ16_000537 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SOJ16_000534 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SOJ16_000536 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SOJ16_001007 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SOJ16_001300 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:cdan00750]
D SOJ16_000637 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SOJ16_001902 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D SOJ16_001901 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cdan00760]
D SOJ16_001170 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SOJ16_001169 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SOJ16_001171 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SOJ16_000858 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SOJ16_001772 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SOJ16_001207 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SOJ16_000629 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOJ16_000222 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SOJ16_001291 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cdan00770]
D SOJ16_000648 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000451 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOJ16_000452 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOJ16_000453 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOJ16_000647 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SOJ16_001972 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SOJ16_001971 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SOJ16_000512 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SOJ16_000989 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SOJ16_000629 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOJ16_001184 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SOJ16_001397 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SOJ16_001900 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SOJ16_000646 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOJ16_001970 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cdan00780]
D SOJ16_001106 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOJ16_001104 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOJ16_002147 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOJ16_002532 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SOJ16_002533 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SOJ16_002531 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D SOJ16_002654 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D SOJ16_000205 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cdan00785]
D SOJ16_000687 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SOJ16_000688 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_000689 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOJ16_000693 thiamine pyrophosphate-dependent enzyme K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
C 00790 Folate biosynthesis [PATH:cdan00790]
D SOJ16_000380 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D SOJ16_002745 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SOJ16_000208 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SOJ16_000206 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SOJ16_001455 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SOJ16_000535 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SOJ16_002338 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D SOJ16_002337 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SOJ16_002336 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SOJ16_000379 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SOJ16_000200 queE; putative 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SOJ16_000195 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SOJ16_002650 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SOJ16_000449 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D SOJ16_000823 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SOJ16_000824 cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SOJ16_000825 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SOJ16_000821 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SOJ16_000822 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SOJ16_001173 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cdan00670]
D SOJ16_002327 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SOJ16_000945 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SOJ16_001012 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOJ16_001403 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SOJ16_001402 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SOJ16_000992 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SOJ16_000736 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOJ16_000301 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SOJ16_002144 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D SOJ16_001216 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cdan00860]
D SOJ16_000922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOJ16_001153 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SOJ16_001158 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOJ16_001157 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SOJ16_001155 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SOJ16_000843 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SOJ16_001156 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D SOJ16_001154 NAD(P)-dependent oxidoreductase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D SOJ16_002203 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D SOJ16_001745 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cdan00900]
D SOJ16_001245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SOJ16_001810 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SOJ16_001495 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SOJ16_001085 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SOJ16_001808 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SOJ16_001284 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D SOJ16_000968 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SOJ16_001812 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOJ16_001554 M56 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
D SOJ16_000174 glycosyltransferase family 2 protein K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SOJ16_002159 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_002160 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOJ16_002456 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D SOJ16_001628 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cdan00946]
D SOJ16_002479 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SOJ16_000394 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cdan00332]
D SOJ16_001613 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SOJ16_001612 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cdan00261]
D SOJ16_001144 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOJ16_001143 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOJ16_001960 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOJ16_001082 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOJ16_001081 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SOJ16_001080 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cdan00521]
D SOJ16_000521 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D SOJ16_001628 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SOJ16_000521 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:cdan00401]
D SOJ16_000838 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_000841 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001438 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SOJ16_001674 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SOJ16_001673 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SOJ16_001103 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOJ16_001104 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SOJ16_001105 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cdan00999]
D SOJ16_000670 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOJ16_002479 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SOJ16_000394 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D SOJ16_001275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SOJ16_002432 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SOJ16_002433 OadG family protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cdan00625]
D SOJ16_002353 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SOJ16_000475 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D SOJ16_000478 nitrogenase component I subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:cdan00633]
D SOJ16_002586 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D SOJ16_002493 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D SOJ16_000814 4Fe-4S binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D SOJ16_000875 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_001691 thiamine pyrophosphate-dependent enzyme K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D SOJ16_000876 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D SOJ16_000873 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_001692 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D SOJ16_000874 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cdan00626]
D SOJ16_002353 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cdan03020]
D SOJ16_000798 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOJ16_000799 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOJ16_000988 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cdan03010]
D SOJ16_001284 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D SOJ16_002076 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D SOJ16_001816 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SOJ16_001736 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SOJ16_001715 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SOJ16_001725 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SOJ16_002212 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SOJ16_000802 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SOJ16_001728 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SOJ16_002169 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SOJ16_001743 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SOJ16_001716 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SOJ16_000801 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SOJ16_001717 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SOJ16_001729 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SOJ16_001008 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SOJ16_000931 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SOJ16_001733 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SOJ16_002210 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SOJ16_001738 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SOJ16_001912 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SOJ16_001224 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SOJ16_001503 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SOJ16_001742 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SOJ16_001741 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SOJ16_001730 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SOJ16_001727 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SOJ16_001501 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SOJ16_000880 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SOJ16_001502 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SOJ16_001504 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SOJ16_002170 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SOJ16_001732 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SOJ16_001724 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SOJ16_001735 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SOJ16_001713 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SOJ16_001726 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SOJ16_000935 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SOJ16_001163 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SOJ16_001066 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SOJ16_001737 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SOJ16_001740 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SOJ16_001731 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SOJ16_001204 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D SOJ16_001068 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SOJ16_002320 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SOJ16_001734 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SOJ16_001020 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SOJ16_001215 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SOJ16_001507 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SOJ16_002757 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SOJ16_001162 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SOJ16_001718 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SOJ16_000800 ribosomal L7Ae/L30e/S12e/Gadd45 family protein K07590 RP-L7A; large subunit ribosomal protein L7A
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cdan00970]
D SOJ16_000922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOJ16_002363 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SOJ16_000756 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOJ16_000757 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SOJ16_000755 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SOJ16_001289 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOJ16_000568 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOJ16_001367 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SOJ16_000794 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOJ16_000871 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOJ16_002361 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOJ16_000283 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOJ16_000992 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SOJ16_001456 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOJ16_001211 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOJ16_001307 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOJ16_000641 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOJ16_002136 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOJ16_000547 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOJ16_000567 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOJ16_001239 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOJ16_001240 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOJ16_000885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOJ16_000785 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cdan03060]
D SOJ16_001723 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOJ16_001506 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOJ16_002229 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOJ16_000605 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SOJ16_000606 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOJ16_000337 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOJ16_002754 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOJ16_000930 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOJ16_001119 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOJ16_001609 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SOJ16_001323 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cdan04122]
D SOJ16_001523 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001697 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001760 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SOJ16_001695 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SOJ16_000823 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SOJ16_000817 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SOJ16_000824 cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SOJ16_000825 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SOJ16_001522 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SOJ16_000198 MoaD/ThiS family protein K03154 thiS; sulfur carrier protein
D SOJ16_000318 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D SOJ16_001135 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D SOJ16_000321 thiF; sulfur carrier protein ThiS adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D SOJ16_001137 M67 family metallopeptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cdan03018]
D SOJ16_001361 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOJ16_001009 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SOJ16_002227 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOJ16_001015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SOJ16_000951 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SOJ16_000607 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001527 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOJ16_002252 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOJ16_001464 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cdan03030]
D SOJ16_001218 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOJ16_001806 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SOJ16_002226 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOJ16_000467 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOJ16_001913 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOJ16_000002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOJ16_000881 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SOJ16_000702 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SOJ16_002016 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_002211 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_001298 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOJ16_002073 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOJ16_000937 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SOJ16_001398 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOJ16_001585 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cdan03410]
D SOJ16_001017 DNA-3-methyladenine glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D SOJ16_001428 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SOJ16_001836 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SOJ16_001677 TIM barrel protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SOJ16_001398 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOJ16_000673 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOJ16_001585 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cdan03420]
D SOJ16_000620 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SOJ16_001394 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SOJ16_001395 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SOJ16_000313 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SOJ16_001241 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOJ16_000303 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOJ16_001398 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOJ16_001585 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cdan03430]
D SOJ16_001467 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SOJ16_001610 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SOJ16_001466 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SOJ16_001241 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOJ16_000303 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOJ16_000965 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SOJ16_000966 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SOJ16_000673 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOJ16_002016 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_002211 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_001218 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOJ16_001806 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SOJ16_000002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOJ16_002226 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOJ16_001913 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOJ16_000467 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOJ16_001585 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOJ16_001563 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cdan03440]
D SOJ16_000673 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOJ16_002016 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_002211 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_000003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SOJ16_001368 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SOJ16_001092 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D SOJ16_000949 recA; recombinase RecA K03553 recA; recombination protein RecA
D SOJ16_001398 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOJ16_001063 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SOJ16_001064 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SOJ16_001181 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SOJ16_000792 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SOJ16_002716 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SOJ16_001218 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOJ16_001806 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SOJ16_000002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOJ16_002226 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOJ16_001913 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOJ16_000467 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOJ16_000990 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cdan02010]
D SOJ16_000818 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D SOJ16_000819 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D SOJ16_000820 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D SOJ16_001132 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOJ16_001134 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D SOJ16_001133 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SOJ16_000483 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D SOJ16_000484 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D SOJ16_001803 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SOJ16_002556 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SOJ16_002560 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SOJ16_002559 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SOJ16_000573 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000594 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000228 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000091 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000595 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000084 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000092 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000229 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000596 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000085 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000093 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000230 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000572 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000585 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000842 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000844 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002152 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002205 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002459 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002542 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000076 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000570 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000583 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000845 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002129 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002154 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002207 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002460 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002541 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000074 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000571 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000584 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000846 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002128 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002153 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002206 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002461 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002540 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000075 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002439 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D SOJ16_002438 ABC transporter permease subunit K10237 thuF; trehalose/maltose transport system permease protein
D SOJ16_002437 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D SOJ16_001783 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SOJ16_001780 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SOJ16_001779 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SOJ16_001781 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SOJ16_002371 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SOJ16_002372 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D SOJ16_002373 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SOJ16_002376 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SOJ16_000096 substrate-binding domain-containing protein K10543 xylF; D-xylose transport system substrate-binding protein
D SOJ16_000100 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D SOJ16_000102 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D SOJ16_000101 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D SOJ16_001109 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SOJ16_002744 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D SOJ16_001110 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SOJ16_001111 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D SOJ16_001444 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SOJ16_001340 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOJ16_000488 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOJ16_001339 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOJ16_001338 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOJ16_001337 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOJ16_001336 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOJ16_001117 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SOJ16_001116 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SOJ16_001115 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SOJ16_001906 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SOJ16_001910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SOJ16_001909 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SOJ16_001908 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SOJ16_001907 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SOJ16_002305 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D SOJ16_002307 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D SOJ16_002306 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SOJ16_000854 PDGLE domain-containing protein K02009 cbiN; cobalt/nickel transport protein
D SOJ16_000853 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D SOJ16_000855 energy-coupling factor transporter transmembrane component T K02008 cbiQ; cobalt/nickel transport system permease protein
D SOJ16_000856 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D SOJ16_002534 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D SOJ16_001664 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D SOJ16_001666 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SOJ16_001665 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SOJ16_000103 ABC transporter permease K09696 natB; sodium transport system permease protein
D SOJ16_000104 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D SOJ16_000892 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D SOJ16_001800 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SOJ16_001801 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SOJ16_001498 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_000046 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_001499 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_000047 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002584 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002632 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002583 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002631 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_001357 peptidase domain-containing ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:cdan02060]
D SOJ16_000151 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SOJ16_001237 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOJ16_000150 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOJ16_000299 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOJ16_000149 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SOJ16_000147 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SOJ16_000148 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cdan03070]
D SOJ16_000605 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SOJ16_000606 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOJ16_001506 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOJ16_002229 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOJ16_001723 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOJ16_000337 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOJ16_002754 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOJ16_001119 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOJ16_000930 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOJ16_002077 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cdan02020]
D SOJ16_001447 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOJ16_001448 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SOJ16_001748 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SOJ16_002745 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SOJ16_001109 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SOJ16_002744 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D SOJ16_001411 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_001763 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_001636 flagellin K02406 fliC; flagellin
D SOJ16_002259 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SOJ16_001024 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SOJ16_000610 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SOJ16_000070 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SOJ16_000069 response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SOJ16_000001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOJ16_001295 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D SOJ16_001014 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SOJ16_000104 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D SOJ16_000103 ABC transporter permease K09696 natB; sodium transport system permease protein
D SOJ16_001646 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D SOJ16_002034 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SOJ16_002167 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D SOJ16_000474 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D SOJ16_000625 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOJ16_001872 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D SOJ16_001873 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D SOJ16_000554 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SOJ16_000549 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000557 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000202 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000550 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002221 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002263 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_000552 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_002264 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_000555 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000558 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_002274 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000177 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000551 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000796 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000277 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000574 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000582 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_002156 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000077 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000227 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000090 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000847 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_002539 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000575 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000581 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000848 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_002155 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_002538 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000078 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000089 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000097 AraC family transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000225 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_001850 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D SOJ16_002457 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D SOJ16_001944 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SOJ16_002519 pectinesterase family protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D SOJ16_000569 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_001856 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_000236 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_000327 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_001860 glycoside hydrolase family 48 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SOJ16_001654 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cdan02024]
D SOJ16_001464 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOJ16_001674 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SOJ16_001673 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SOJ16_000610 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SOJ16_001340 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOJ16_000488 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOJ16_001339 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOJ16_001338 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOJ16_001337 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOJ16_001336 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOJ16_001548 glycosyl hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D SOJ16_000537 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SOJ16_001906 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SOJ16_001910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SOJ16_001909 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SOJ16_001908 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SOJ16_001907 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SOJ16_001357 peptidase domain-containing ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SOJ16_001356 HlyD family efflux transporter periplasmic adaptor subunit K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SOJ16_000329 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SOJ16_000330 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SOJ16_000331 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SOJ16_000332 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SOJ16_002754 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOJ16_001506 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOJ16_002229 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOJ16_001723 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOJ16_000337 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOJ16_001119 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOJ16_000930 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOJ16_001295 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cdan02030]
D SOJ16_000549 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000557 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000202 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_002371 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SOJ16_000552 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_002264 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_000550 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002221 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002263 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_000555 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000558 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_002274 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000177 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_002262 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D SOJ16_002249 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D SOJ16_000551 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000796 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000277 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_002261 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D SOJ16_000554 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SOJ16_002289 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOJ16_002277 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D SOJ16_002275 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D SOJ16_001024 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SOJ16_001025 OmpA family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cdan02040]
D SOJ16_002291 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SOJ16_002290 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOJ16_002289 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOJ16_002288 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D SOJ16_002287 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOJ16_002278 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D SOJ16_002277 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D SOJ16_002275 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D SOJ16_002273 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOJ16_002272 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOJ16_002271 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOJ16_002270 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOJ16_002268 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOJ16_002269 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SOJ16_002293 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOJ16_002292 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOJ16_002282 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOJ16_002280 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SOJ16_002467 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOJ16_002466 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOJ16_002465 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOJ16_001652 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SOJ16_001651 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOJ16_001636 flagellin K02406 fliC; flagellin
D SOJ16_001621 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D SOJ16_001620 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SOJ16_001024 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SOJ16_001025 OmpA family protein K02557 motB; chemotaxis protein MotB
D SOJ16_001654 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOJ16_000703 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SOJ16_002259 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SOJ16_001361 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D SOJ16_000736 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cdan01501]
D SOJ16_001906 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SOJ16_001910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SOJ16_001909 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SOJ16_001908 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SOJ16_001907 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SOJ16_001315 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D SOJ16_001314 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SOJ16_002655 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOJ16_001261 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cdan01502]
D SOJ16_002139 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOJ16_001897 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SOJ16_000769 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SOJ16_000770 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOJ16_000773 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cdan01503]
D SOJ16_001016 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_000369 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_001032 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_001411 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_001763 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cdan01000]
C 01001 Protein kinases [BR:cdan01001]
D SOJ16_000997 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SOJ16_001248 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D SOJ16_002520 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SOJ16_000376 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SOJ16_002403 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SOJ16_001447 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOJ16_000070 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SOJ16_000552 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_002264 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_000574 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000582 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_002156 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000077 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000227 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000090 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000847 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_002539 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cdan01009]
D SOJ16_000882 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_000996 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cdan01002]
D SOJ16_001323 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SOJ16_001871 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SOJ16_002022 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SOJ16_001790 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D SOJ16_000779 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D SOJ16_001389 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOJ16_000545 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D SOJ16_001357 peptidase domain-containing ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SOJ16_001405 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SOJ16_002451 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOJ16_001515 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOJ16_000162 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D SOJ16_001075 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SOJ16_000370 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SOJ16_000645 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SOJ16_001721 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SOJ16_001675 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SOJ16_001520 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SOJ16_001554 M56 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SOJ16_001809 M50 family metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SOJ16_001315 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D SOJ16_001018 PrsW family glutamic-type intramembrane protease K24131 prsW; protease PrsW [EC:3.4.-.-]
D SOJ16_001411 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_001763 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_000268 S8 family peptidase K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D SOJ16_001212 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001236 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001536 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_000699 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SOJ16_000915 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SOJ16_001462 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SOJ16_001609 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SOJ16_001798 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SOJ16_002469 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SOJ16_000010 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D SOJ16_001294 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D SOJ16_002296 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SOJ16_000732 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D SOJ16_000365 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cdan01003]
D SOJ16_001855 glycosyltransferase family 39 protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D SOJ16_001794 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SOJ16_000526 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D SOJ16_002655 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOJ16_002396 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cdan01005]
D SOJ16_001198 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D SOJ16_000333 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cdan01011]
D SOJ16_000612 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000774 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000203 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOJ16_000295 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOJ16_002527 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SOJ16_000771 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOJ16_000768 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOJ16_002139 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOJ16_001897 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SOJ16_002138 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SOJ16_000770 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOJ16_000773 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SOJ16_001832 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SOJ16_000884 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOJ16_001431 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOJ16_002655 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOJ16_001261 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOJ16_000767 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D SOJ16_001212 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001236 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001536 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOJ16_001396 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SOJ16_000730 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SOJ16_001537 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SOJ16_000214 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D SOJ16_000253 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D SOJ16_001016 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_000369 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_001032 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cdan01004]
D SOJ16_001103 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOJ16_001102 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOJ16_001106 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOJ16_001104 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOJ16_002147 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOJ16_000782 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOJ16_001101 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SOJ16_000739 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_002301 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_000173 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOJ16_001283 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cdan01006]
D SOJ16_000968 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SOJ16_001812 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOJ16_001465 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:cdan01007]
D SOJ16_000922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOJ16_002363 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SOJ16_000885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOJ16_000785 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SOJ16_002361 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOJ16_002136 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOJ16_000283 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOJ16_001307 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOJ16_001456 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOJ16_001211 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOJ16_000641 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOJ16_000568 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOJ16_000567 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOJ16_001367 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SOJ16_000871 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOJ16_000547 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOJ16_000794 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOJ16_001289 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOJ16_001239 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOJ16_001240 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOJ16_001076 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOJ16_000514 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D SOJ16_001371 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-]
D SOJ16_000841 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_001438 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOJ16_002326 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SOJ16_001835 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOJ16_002532 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SOJ16_001158 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOJ16_000646 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cdan00194]
D SOJ16_001381 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SOJ16_001382 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SOJ16_001383 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SOJ16_001384 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SOJ16_001385 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SOJ16_001386 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SOJ16_001387 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOJ16_001388 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cdan03000]
D SOJ16_001145 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D SOJ16_002518 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SOJ16_000146 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SOJ16_000628 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D SOJ16_000541 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOJ16_002184 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOJ16_002544 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOJ16_000181 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOJ16_000353 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOJ16_000408 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOJ16_002440 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SOJ16_000306 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SOJ16_002342 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D SOJ16_001778 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SOJ16_001539 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SOJ16_002415 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SOJ16_000170 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SOJ16_002513 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SOJ16_001698 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D SOJ16_001560 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SOJ16_001705 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SOJ16_002303 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SOJ16_000291 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SOJ16_001314 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SOJ16_000205 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SOJ16_002526 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SOJ16_000636 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D SOJ16_002294 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D SOJ16_001591 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SOJ16_001761 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SOJ16_000180 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D SOJ16_000971 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D SOJ16_002740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOJ16_002749 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOJ16_001202 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D SOJ16_000914 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D SOJ16_001292 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SOJ16_001529 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SOJ16_001826 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D SOJ16_001365 sugar-binding domain-containing protein K05311 cggR; central glycolytic genes regulator
D SOJ16_001219 mtrB; trp RNA-binding attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D SOJ16_001325 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOJ16_001477 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SOJ16_000764 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cdan03021]
D SOJ16_000798 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOJ16_000799 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOJ16_000988 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SOJ16_000703 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SOJ16_001680 sigY; RNA polymerase sigma factor SigY K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SOJ16_000372 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SOJ16_000377 SigB/SigF/SigG family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D SOJ16_000733 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D SOJ16_000780 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D SOJ16_000781 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D SOJ16_001657 SigF/SigG family RNA polymerase sporulation sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D SOJ16_001998 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D SOJ16_002141 RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D SOJ16_002259 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SOJ16_001001 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SOJ16_000964 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SOJ16_001505 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SOJ16_001248 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D SOJ16_002738 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D SOJ16_000375 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D SOJ16_002520 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SOJ16_000376 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SOJ16_000640 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D SOJ16_001015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cdan03019]
D SOJ16_002244 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D SOJ16_001107 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOJ16_000607 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SOJ16_000951 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SOJ16_002227 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOJ16_001361 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOJ16_001009 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SOJ16_001015 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SOJ16_001221 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOJ16_001527 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOJ16_002252 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOJ16_001464 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOJ16_001646 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D SOJ16_000296 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cdan03011]
D SOJ16_001284 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D SOJ16_002076 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D SOJ16_001816 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SOJ16_001736 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SOJ16_001715 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SOJ16_001725 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SOJ16_002212 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SOJ16_000802 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SOJ16_001728 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SOJ16_002169 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SOJ16_001743 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SOJ16_001716 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SOJ16_000801 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SOJ16_001717 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SOJ16_001729 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SOJ16_001008 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SOJ16_000931 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SOJ16_001733 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SOJ16_002210 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SOJ16_001738 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SOJ16_001912 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SOJ16_001224 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SOJ16_001503 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SOJ16_001742 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SOJ16_001741 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SOJ16_001730 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SOJ16_001727 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SOJ16_000880 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SOJ16_001502 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SOJ16_001504 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SOJ16_001501 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SOJ16_002170 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SOJ16_001732 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SOJ16_001724 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SOJ16_001735 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SOJ16_001713 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SOJ16_001726 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SOJ16_000935 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SOJ16_001163 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SOJ16_001066 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SOJ16_001737 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SOJ16_001740 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SOJ16_001731 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SOJ16_001068 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SOJ16_002320 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SOJ16_001734 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SOJ16_001020 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SOJ16_001215 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SOJ16_001507 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SOJ16_002757 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SOJ16_001162 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SOJ16_001718 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SOJ16_001204 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D SOJ16_000800 ribosomal L7Ae/L30e/S12e/Gadd45 family protein K07590 RP-L7A; large subunit ribosomal protein L7A
C 03009 Ribosome biogenesis [BR:cdan03009]
D SOJ16_001107 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOJ16_001369 era; GTPase Era K03595 era; GTPase
D SOJ16_001069 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SOJ16_001001 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SOJ16_000964 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SOJ16_001505 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SOJ16_001177 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SOJ16_000338 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SOJ16_000994 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SOJ16_001183 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SOJ16_001524 RsmE family RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SOJ16_002750 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SOJ16_000765 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SOJ16_000179 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SOJ16_001246 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SOJ16_002143 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SOJ16_001029 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SOJ16_001175 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SOJ16_000995 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SOJ16_000392 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SOJ16_001521 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SOJ16_001533 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SOJ16_001324 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SOJ16_001370 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SOJ16_000385 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SOJ16_001453 RimK family alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D SOJ16_000933 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D SOJ16_000946 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D SOJ16_001525 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SOJ16_002244 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D SOJ16_001168 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SOJ16_002149 ribonuclease III domain-containing protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SOJ16_000998 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SOJ16_000738 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D SOJ16_000936 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D SOJ16_000805 hflX; GTPase HflX K03665 hflX; GTPase
D SOJ16_001027 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SOJ16_001949 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SOJ16_001004 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D SOJ16_001000 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D SOJ16_001210 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D SOJ16_001230 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D SOJ16_001071 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D SOJ16_002224 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D SOJ16_001601 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D SOJ16_001214 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cdan03016]
D SOJ16_001693 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SOJ16_000922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOJ16_000547 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOJ16_001307 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOJ16_001211 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOJ16_000283 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOJ16_002136 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOJ16_000641 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOJ16_000568 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOJ16_001289 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOJ16_001367 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SOJ16_000794 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOJ16_000871 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOJ16_002361 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOJ16_001456 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOJ16_000567 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOJ16_001239 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOJ16_001240 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOJ16_000885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOJ16_000785 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SOJ16_001948 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SOJ16_001290 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOJ16_002419 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D SOJ16_001663 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SOJ16_001006 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SOJ16_002318 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D SOJ16_001523 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001697 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001027 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SOJ16_001465 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SOJ16_002752 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SOJ16_002751 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SOJ16_002756 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SOJ16_000831 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SOJ16_001615 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D SOJ16_002363 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SOJ16_002521 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SOJ16_002472 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SOJ16_001468 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SOJ16_001238 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D SOJ16_002297 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SOJ16_000934 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SOJ16_001587 class I SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SOJ16_002248 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SOJ16_000178 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D SOJ16_001164 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D SOJ16_001695 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SOJ16_000199 TIGR00269 family protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D SOJ16_002612 ATP-binding protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D SOJ16_001760 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SOJ16_000254 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SOJ16_000195 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SOJ16_000379 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SOJ16_000200 queE; putative 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SOJ16_002650 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SOJ16_002164 4Fe-4S double cluster binding domain-containing protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SOJ16_001065 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SOJ16_000325 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SOJ16_001522 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SOJ16_000622 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SOJ16_000384 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SOJ16_001831 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SOJ16_000383 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SOJ16_001422 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SOJ16_001188 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D SOJ16_002227 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOJ16_001009 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cdan03012]
D SOJ16_001003 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SOJ16_001161 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SOJ16_001815 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D SOJ16_000804 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SOJ16_000803 fusA; elongation factor G K02355 fusA; elongation factor G
D SOJ16_001829 fusA; elongation factor G K02355 fusA; elongation factor G
D SOJ16_001023 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SOJ16_001813 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SOJ16_001022 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SOJ16_000619 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SOJ16_001719 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SOJ16_002243 efp; elongation factor P K02356 efp; elongation factor P
D SOJ16_002222 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cdan03110]
D SOJ16_001475 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SOJ16_001823 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SOJ16_000700 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SOJ16_002295 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SOJ16_001527 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOJ16_002252 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOJ16_001377 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D SOJ16_000742 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D SOJ16_001528 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SOJ16_001476 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D SOJ16_002253 co-chaperone GroES K04078 groES; chaperonin GroES
D SOJ16_001411 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_001763 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOJ16_001388 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOJ16_001040 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D SOJ16_001041 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D SOJ16_000268 S8 family peptidase K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D SOJ16_000087 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SOJ16_000621 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SOJ16_001592 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cdan04131]
D SOJ16_001364 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOJ16_001222 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:cdan03032]
D SOJ16_001298 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOJ16_002073 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOJ16_000630 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SOJ16_000001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOJ16_000881 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SOJ16_002053 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D SOJ16_002146 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D SOJ16_000702 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SOJ16_002016 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_002211 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_001218 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOJ16_001806 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SOJ16_000002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOJ16_001913 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOJ16_000467 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOJ16_002226 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOJ16_000937 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SOJ16_001398 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOJ16_001585 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOJ16_001563 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOJ16_000009 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SOJ16_002298 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SOJ16_001078 rgy; reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:cdan03036]
D SOJ16_001107 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOJ16_000630 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SOJ16_000001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOJ16_001464 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOJ16_001118 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D SOJ16_000786 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D SOJ16_000787 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D SOJ16_001801 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SOJ16_000766 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SOJ16_000775 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D SOJ16_000772 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D SOJ16_001800 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SOJ16_000778 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOJ16_000363 cell division protein ZapA K09888 zapA; cell division protein ZapA
D SOJ16_001016 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_000369 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_001032 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOJ16_001262 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SOJ16_001263 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SOJ16_001264 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SOJ16_001306 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D SOJ16_001303 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D SOJ16_001258 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOJ16_002468 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOJ16_001259 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SOJ16_001265 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D SOJ16_002742 AAA family ATPase K03496 parA; chromosome partitioning protein
D SOJ16_002740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOJ16_002749 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOJ16_002751 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SOJ16_002750 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SOJ16_002297 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SOJ16_001786 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D SOJ16_001342 tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D SOJ16_002236 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SOJ16_000916 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D SOJ16_000298 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cdan03400]
D SOJ16_000393 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SOJ16_001017 DNA-3-methyladenine glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D SOJ16_001428 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SOJ16_001375 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SOJ16_001836 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SOJ16_001677 TIM barrel protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SOJ16_000673 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOJ16_001585 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOJ16_001398 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOJ16_001394 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SOJ16_001395 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SOJ16_000313 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SOJ16_001241 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOJ16_000303 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOJ16_000798 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOJ16_000799 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOJ16_000988 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SOJ16_000620 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SOJ16_001467 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SOJ16_001610 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SOJ16_001466 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SOJ16_000965 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SOJ16_000966 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SOJ16_001218 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOJ16_001806 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SOJ16_000002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOJ16_001913 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOJ16_000467 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOJ16_002226 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOJ16_002016 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_002211 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_001563 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOJ16_002716 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SOJ16_000949 recA; recombinase RecA K03553 recA; recombination protein RecA
D SOJ16_001063 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SOJ16_001064 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SOJ16_000990 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SOJ16_001090 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D SOJ16_001089 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D SOJ16_002165 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SOJ16_000003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SOJ16_001181 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SOJ16_000792 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SOJ16_001368 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SOJ16_001092 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D SOJ16_000302 3'-5' exonuclease K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SOJ16_002680 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D SOJ16_000124 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D SOJ16_000009 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SOJ16_002298 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SOJ16_000630 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SOJ16_002441 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SOJ16_001462 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SOJ16_000950 RecX family transcriptional regulator K03565 recX; regulatory protein
D SOJ16_001005 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cdan03029]
D SOJ16_001003 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SOJ16_001161 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SOJ16_001815 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D SOJ16_000804 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SOJ16_000803 fusA; elongation factor G K02355 fusA; elongation factor G
D SOJ16_001829 fusA; elongation factor G K02355 fusA; elongation factor G
D SOJ16_001369 era; GTPase Era K03595 era; GTPase
D SOJ16_000885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOJ16_001211 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOJ16_000568 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOJ16_001367 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SOJ16_002136 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOJ16_000756 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOJ16_000757 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SOJ16_000755 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SOJ16_002016 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_002211 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOJ16_001527 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOJ16_001528 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SOJ16_002252 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOJ16_002253 co-chaperone GroES K04078 groES; chaperonin GroES
D SOJ16_001377 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D SOJ16_001523 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001697 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_002754 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cdan02000]
D SOJ16_001498 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_000046 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_001499 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_000047 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002584 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002632 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002583 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_002631 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOJ16_000406 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SOJ16_001357 peptidase domain-containing ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SOJ16_000483 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D SOJ16_000484 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D SOJ16_000818 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D SOJ16_000819 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D SOJ16_000820 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D SOJ16_001132 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOJ16_001134 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D SOJ16_001133 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SOJ16_001803 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SOJ16_000409 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein
D SOJ16_000410 sugar ABC transporter permease K25087 musF; maltose transport system permease protein
D SOJ16_000411 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein
D SOJ16_002556 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SOJ16_002560 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SOJ16_002559 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SOJ16_000573 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000594 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000228 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000091 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SOJ16_000595 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000084 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000092 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000229 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000596 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000085 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000093 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_000230 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SOJ16_002439 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D SOJ16_002438 ABC transporter permease subunit K10237 thuF; trehalose/maltose transport system permease protein
D SOJ16_002437 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D SOJ16_000572 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000585 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000842 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000844 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002152 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002205 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002459 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_002542 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000076 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SOJ16_000570 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000583 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000845 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002129 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002154 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002207 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002460 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_002541 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000074 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D SOJ16_000571 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000584 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000846 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002128 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002153 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002206 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002461 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_002540 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000075 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SOJ16_000096 substrate-binding domain-containing protein K10543 xylF; D-xylose transport system substrate-binding protein
D SOJ16_000100 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D SOJ16_000102 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D SOJ16_000101 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D SOJ16_002371 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SOJ16_002372 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D SOJ16_002373 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SOJ16_002376 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SOJ16_002202 extracellular solute-binding protein K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D SOJ16_002201 sugar ABC transporter permease K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D SOJ16_002200 carbohydrate ABC transporter permease K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D SOJ16_001783 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SOJ16_001780 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SOJ16_001779 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SOJ16_001781 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SOJ16_000350 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SOJ16_000415 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SOJ16_000190 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SOJ16_000351 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D SOJ16_000416 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D SOJ16_000184 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D SOJ16_000185 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SOJ16_000352 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SOJ16_000417 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SOJ16_000189 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SOJ16_001109 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SOJ16_002744 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D SOJ16_001110 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SOJ16_001111 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D SOJ16_001444 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SOJ16_001340 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOJ16_000488 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOJ16_001339 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOJ16_001338 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOJ16_001337 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOJ16_001336 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOJ16_001117 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SOJ16_001116 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SOJ16_001115 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SOJ16_001936 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D SOJ16_001935 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SOJ16_001906 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SOJ16_001910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SOJ16_001909 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SOJ16_001908 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SOJ16_001907 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SOJ16_000329 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SOJ16_000330 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SOJ16_000331 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SOJ16_000332 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SOJ16_000271 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SOJ16_000272 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D SOJ16_000273 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SOJ16_001890 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D SOJ16_001889 iron chelate uptake ABC transporter family permease subunit K25027 btuC; cobalamin transport system permease protein
D SOJ16_001888 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D SOJ16_002305 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D SOJ16_002307 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D SOJ16_002306 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SOJ16_000854 PDGLE domain-containing protein K02009 cbiN; cobalt/nickel transport protein
D SOJ16_000855 energy-coupling factor transporter transmembrane component T K02008 cbiQ; cobalt/nickel transport system permease protein
D SOJ16_000853 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D SOJ16_000856 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D SOJ16_002534 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D SOJ16_001664 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D SOJ16_001666 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SOJ16_001665 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SOJ16_000103 ABC transporter permease K09696 natB; sodium transport system permease protein
D SOJ16_000104 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D SOJ16_000892 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D SOJ16_002501 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D SOJ16_002500 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D SOJ16_002502 GldG family protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D SOJ16_001481 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D SOJ16_001482 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D SOJ16_001483 biotin/lipoyl-binding protein K25183 ybhG; membrane fusion protein YbhG
D SOJ16_002484 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D SOJ16_002637 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D SOJ16_002485 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D SOJ16_002636 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D SOJ16_002486 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D SOJ16_002635 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D SOJ16_001800 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SOJ16_001801 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SOJ16_001685 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D SOJ16_000653 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_000904 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_001345 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_001684 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_002627 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_000107 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_000159 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_000239 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_000038 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_000754 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOJ16_001550 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SOJ16_002423 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SOJ16_002571 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SOJ16_002623 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SOJ16_000246 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SOJ16_000659 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOJ16_001551 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOJ16_002424 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOJ16_002570 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOJ16_000247 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOJ16_002621 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SOJ16_001128 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D SOJ16_000151 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SOJ16_001237 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOJ16_000150 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOJ16_000299 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOJ16_000149 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SOJ16_000148 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SOJ16_002168 ammonium transporter K03320 amt; ammonium transporter, Amt family
D SOJ16_000473 ammonium transporter K03320 amt; ammonium transporter, Amt family
D SOJ16_000546 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D SOJ16_000638 CBS domain-containing protein K06213 mgtE; magnesium transporter
D SOJ16_001024 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SOJ16_001025 OmpA family protein K02557 motB; chemotaxis protein MotB
D SOJ16_000565 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D SOJ16_000566 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D SOJ16_000901 subtilosin A family bacteriocin K27611 sboA; subtilosin-A
D SOJ16_002759 endospore germination permease K06296 gerKB; spore germination protein KB
D SOJ16_001954 endospore germination permease K06311 yndE; spore germination protein
D SOJ16_001026 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D SOJ16_001595 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D SOJ16_002489 L-lactate permease K03303 lutP; lactate permease
D SOJ16_002498 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D SOJ16_000250 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D SOJ16_000251 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D SOJ16_000252 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D SOJ16_001326 uraA; uracil permease K02824 uraA; uracil permease
D SOJ16_001410 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SOJ16_002348 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D SOJ16_001756 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D SOJ16_001703 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D SOJ16_001296 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D SOJ16_000809 oligosaccharide flippase family protein K06409 spoVB; stage V sporulation protein B
D SOJ16_000884 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOJ16_001431 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOJ16_001390 AEC family transporter K24180 mleP; malate permease and related proteins
D SOJ16_002455 AEC family transporter K24180 mleP; malate permease and related proteins
D SOJ16_001178 ECF transporter S component K23675 fmnP; riboflavin transporter
D SOJ16_000772 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D SOJ16_002615 FTR1 family protein K07243 FTR; high-affinity iron transporter
D SOJ16_000748 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D SOJ16_002434 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SOJ16_001276 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SOJ16_001273 carboxyl transferase domain-containing protein K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D SOJ16_001275 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SOJ16_002432 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SOJ16_002433 OadG family protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D SOJ16_001893 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D SOJ16_002579 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D SOJ16_001356 HlyD family efflux transporter periplasmic adaptor subunit K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SOJ16_002403 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SOJ16_002404 Wzz/FepE/Etk N-terminal domain-containing protein K19420 epsA; protein tyrosine kinase modulator
D SOJ16_001540 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D SOJ16_002151 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cdan02044]
D SOJ16_001871 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SOJ16_001872 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D SOJ16_001873 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D SOJ16_001876 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D SOJ16_001874 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D SOJ16_001867 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D SOJ16_001866 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D SOJ16_001875 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SOJ16_002022 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SOJ16_002034 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SOJ16_001304 YggT family protein K02221 yggT; YggT family protein
D SOJ16_001213 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D SOJ16_000616 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SOJ16_001192 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D SOJ16_001914 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D SOJ16_002006 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D SOJ16_001870 competence protein ComFB K02241 comFB; competence protein ComFB
D SOJ16_002268 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOJ16_002269 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SOJ16_000939 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D SOJ16_002290 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOJ16_002288 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D SOJ16_002287 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOJ16_002275 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D SOJ16_002273 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOJ16_002272 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOJ16_002271 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOJ16_002270 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOJ16_002077 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SOJ16_000605 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SOJ16_001506 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOJ16_000606 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOJ16_002229 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOJ16_001723 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOJ16_000930 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOJ16_001119 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOJ16_000337 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOJ16_002754 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system [BR:cdan02022]
D SOJ16_001447 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOJ16_001448 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SOJ16_001748 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SOJ16_000610 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SOJ16_000070 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SOJ16_000069 response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SOJ16_001414 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D SOJ16_001295 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D SOJ16_000552 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_002264 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_000555 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000558 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_002274 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000177 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000551 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000796 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000277 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000574 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000582 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_002156 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000077 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000227 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000090 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000847 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_002539 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SOJ16_000575 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000581 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000848 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_002155 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_002538 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000078 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000089 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000097 AraC family transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_000225 response regulator K07720 yesN; two-component system, response regulator YesN
D SOJ16_001850 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D SOJ16_002457 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D SOJ16_000544 ANTAR domain-containing protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:cdan02035]
D SOJ16_000552 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_002264 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOJ16_000550 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002221 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002263 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOJ16_002249 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D SOJ16_002262 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D SOJ16_002261 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D SOJ16_000554 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SOJ16_000551 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000796 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000277 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOJ16_000555 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000558 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_002274 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000177 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOJ16_000549 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000557 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_000202 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOJ16_002288 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D SOJ16_002287 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOJ16_002273 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOJ16_002272 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOJ16_002271 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOJ16_002270 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOJ16_002268 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOJ16_002269 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SOJ16_002289 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOJ16_002277 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D SOJ16_002275 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D SOJ16_002290 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOJ16_002278 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D SOJ16_002291 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SOJ16_002293 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOJ16_002292 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOJ16_002282 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOJ16_002467 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOJ16_002466 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOJ16_002465 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOJ16_002280 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SOJ16_001652 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SOJ16_001651 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOJ16_001636 flagellin K02406 fliC; flagellin
D SOJ16_001621 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D SOJ16_001620 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SOJ16_002259 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SOJ16_001024 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SOJ16_001025 OmpA family protein K02557 motB; chemotaxis protein MotB
D SOJ16_001647 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D SOJ16_001654 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOJ16_001622 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D SOJ16_002279 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D SOJ16_002267 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D SOJ16_002266 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D SOJ16_001875 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SOJ16_001872 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D SOJ16_001873 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D SOJ16_001876 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D SOJ16_001874 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D SOJ16_001871 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SOJ16_001866 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D SOJ16_001867 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D SOJ16_002022 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SOJ16_002034 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cdan04812]
D SOJ16_000309 amrA; AmmeMemoRadiSam system protein A K06990 MEMO1; MEMO1 family protein
D SOJ16_001258 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOJ16_002468 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOJ16_002081 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM
D SOJ16_000778 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOJ16_001262 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SOJ16_001263 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SOJ16_001264 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SOJ16_002742 AAA family ATPase K03496 parA; chromosome partitioning protein
D SOJ16_002740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOJ16_002749 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cdan04147]
D SOJ16_001361 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOJ16_001364 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOJ16_001363 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOJ16_001222 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOJ16_001075 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SOJ16_002252 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOJ16_001527 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOJ16_001607 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SOJ16_000804 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SOJ16_001290 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOJ16_001911 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SOJ16_000882 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOJ16_001722 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOJ16_001950 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SOJ16_001205 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOJ16_001206 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOJ16_002173 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D SOJ16_000920 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SOJ16_000529 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SOJ16_000625 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOJ16_001157 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SOJ16_002745 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SOJ16_002240 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOJ16_001402 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SOJ16_001554 M56 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SOJ16_000691 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOJ16_001191 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
C 02048 Prokaryotic defense system [BR:cdan02048]
D SOJ16_002680 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D SOJ16_000124 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D SOJ16_002681 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D SOJ16_000125 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D SOJ16_002685 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D SOJ16_000114 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D SOJ16_000122 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D SOJ16_000109 Cas8a1 family CRISPR/Cas system-associated protein K19088 cst1; CRISPR-associated protein Cst1
D SOJ16_000119 cas8a1; type I-B CRISPR-associated protein Cas8b1/Cst1 K19088 cst1; CRISPR-associated protein Cst1
D SOJ16_000111 cas7i; type I-B CRISPR-associated protein Cas7/Cst2/DevR K19075 cst2; CRISPR-associated protein Cst2
D SOJ16_000120 cas7i; type I-B CRISPR-associated protein Cas7/Cst2/DevR K19075 cst2; CRISPR-associated protein Cst2
D SOJ16_002679 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D SOJ16_000123 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D SOJ16_000121 cas5b; type I-B CRISPR-associated protein Cas5b K19090 cas5t; CRISPR-associated protein Cas5t
D SOJ16_002698 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D SOJ16_000118 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D SOJ16_000407 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D SOJ16_002682 TIGR02556 family CRISPR-associated protein K19114 csh1; CRISPR-associated protein Csh1
D SOJ16_002683 cas7b; type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D SOJ16_002684 cas5b; type I-B CRISPR-associated protein Cas5b K19116 cas5h; CRISPR-associated protein Cas5h
D SOJ16_002695 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
D SOJ16_000129 RAMP superfamily CRISPR-associated protein K19134 csx10; CRISPR-associated protein Csx10
D SOJ16_002668 cas10; type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1
D SOJ16_002667 csm2; type III-A CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2
D SOJ16_002666 csm3; type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3
D SOJ16_002665 csm4; type III-A CRISPR-associated RAMP protein Csm4 K19139 csm4; CRISPR-associated protein Csm4
D SOJ16_002664 csm5; type III-A CRISPR-associated RAMP protein Csm5 K19140 csm5; CRISPR-associated protein Csm5
D SOJ16_002662 csx1; CRISPR-associated CARF protein Csx1 K19143 csx1; CRISPR-associated protein Csx1
D SOJ16_001563 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOJ16_000167 DNA methyltransferase K24451 zim; modification methylase
D SOJ16_001895 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SOJ16_001997 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SOJ16_002659 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SOJ16_002406 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D SOJ16_002040 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D SOJ16_000778 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOJ16_001258 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOJ16_002468 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOJ16_000922 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOJ16_001523 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOJ16_001697 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cdan01504]
D SOJ16_001315 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D SOJ16_001314 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cdan00537]
D SOJ16_002745 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SOJ16_001075 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SOJ16_000359 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D SOJ16_000973 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D SOJ16_001473 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D SOJ16_000974 2-oxoacid:acceptor oxidoreductase family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D SOJ16_001472 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D SOJ16_001392 FprA family A-type flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D SOJ16_000908 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SOJ16_000724 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SOJ16_001254 (2Fe-2S) ferredoxin domain-containing protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D SOJ16_001252 nuoE; NADH-quinone oxidoreductase subunit NuoE K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3]
D SOJ16_001255 nuoF; NADH-quinone oxidoreductase subunit NuoF K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D SOJ16_001256 NADH-dependent [FeFe] hydrogenase, group A6 K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D SOJ16_001457 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D SOJ16_001974 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D SOJ16_000627 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SOJ16_001559 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D SOJ16_002075 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SOJ16_000304 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SOJ16_000310 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SOJ16_001945 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SOJ16_001767 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SOJ16_001429 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D SOJ16_000349 glycosyl hydrolase family 65 protein K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D SOJ16_002543 glycoside hydrolase family 130 protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D SOJ16_000661 glycosidase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D SOJ16_000503 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D SOJ16_002319 bis-aminopropyl spermidine synthase family protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D SOJ16_001604 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D SOJ16_000762 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SOJ16_002334 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SOJ16_001180 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SOJ16_000311 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SOJ16_001658 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D SOJ16_000314 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SOJ16_001824 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D SOJ16_002711 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D SOJ16_000064 macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D SOJ16_002179 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SOJ16_002328 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D SOJ16_001223 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SOJ16_000213 SpoIIE family protein phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D SOJ16_002402 CpsB/CapC family capsule biosynthesis tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SOJ16_001915 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D SOJ16_001883 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SOJ16_000982 ARMT1-like domain-containing protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D SOJ16_000879 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SOJ16_001229 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D SOJ16_000284 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SOJ16_000598 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SOJ16_001857 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SOJ16_002120 glycoside hydrolase family 11 protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SOJ16_002352 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SOJ16_002713 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SOJ16_000586 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D SOJ16_000849 alpha-glucuronidase family glycosyl hydrolase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D SOJ16_002506 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D SOJ16_001060 glycoside hydrolase family 31 protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D SOJ16_002157 yicI; alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D SOJ16_000991 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SOJ16_001420 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SOJ16_002712 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SOJ16_000196 Rid family detoxifying hydrolase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SOJ16_002548 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SOJ16_000041 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SOJ16_001028 low molecular weight protein arginine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D SOJ16_001899 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SOJ16_001844 cellulose binding domain-containing protein K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D SOJ16_002192 hypothetical protein K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D SOJ16_001159 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D SOJ16_001605 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D SOJ16_001602 larC; nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D SOJ16_001603 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D SOJ16_002545 AGE family epimerase/isomerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D SOJ16_002405 eam; glutamate 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D SOJ16_000492 Mur ligase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D SOJ16_001497 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SOJ16_002497 calcium-translocating P-type ATPase, SERCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SOJ16_000290 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D SOJ16_001696 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D SOJ16_000481 radical SAM protein K02585 nifB; nitrogen fixation protein NifB
D SOJ16_001034 proton-conducting transporter membrane subunit K14086 echA; ech hydrogenase subunit A
D SOJ16_001035 complex I subunit 1 family protein K14087 echB; ech hydrogenase subunit B
D SOJ16_001036 NADH-quinone oxidoreductase subunit B family protein K14088 echC; ech hydrogenase subunit C
D SOJ16_001037 NADH-quinone oxidoreductase subunit C K14089 echD; ech hydrogenase subunit D
D SOJ16_001038 nickel-dependent hydrogenase large subunit K14090 echE; ech hydrogenase subunit E
D SOJ16_001039 4Fe-4S binding protein K14091 echF; ech hydrogenase subunit F
D SOJ16_001190 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D SOJ16_002247 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D SOJ16_001302 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SOJ16_001793 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D SOJ16_001584 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D SOJ16_000902 radical SAM protein K27612 albA; antilisterial bacteriocin subtilosin biosynthesis protein AlbA
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SOJ16_000741 cold-shock protein K03704 cspA; cold shock protein
D SOJ16_000476 P-II family nitrogen regulator K02589 nifHD1; nitrogen regulatory protein PII 1
D SOJ16_000477 P-II family nitrogen regulator K02590 nifHD2; nitrogen regulatory protein PII 2
D SOJ16_000986 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
D SOJ16_000004 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D SOJ16_000635 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
D SOJ16_001233 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D SOJ16_001825 UvrB/UvrC motif-containing protein K19411 mcsA; protein arginine kinase activator
D SOJ16_000401 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SOJ16_001043 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D SOJ16_001044 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D SOJ16_001045 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D SOJ16_001415 AIR synthase family protein K04655 hypE; hydrogenase expression/formation protein HypE
D SOJ16_001042 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D SOJ16_002308 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D SOJ16_001572 anti-phage-associated DUF1156 domain-containing protein K07445 K07445; putative DNA methylase
D SOJ16_000530 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SOJ16_000469 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SOJ16_000592 endonuclease K07457 K07457; endonuclease III related protein
D SOJ16_000940 YraN family protein K07460 yraN; putative endonuclease
D SOJ16_002299 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D SOJ16_001013 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D SOJ16_000134 IS30 family transposase K07482 K07482; transposase, IS30 family
D SOJ16_000315 IS30 family transposase K07482 K07482; transposase, IS30 family
D SOJ16_000428 IS30 family transposase K07482 K07482; transposase, IS30 family
D SOJ16_000797 IS30 family transposase K07482 K07482; transposase, IS30 family
D SOJ16_001461 IS30 family transposase K07482 K07482; transposase, IS30 family
D SOJ16_002710 IS30 family transposase K07482 K07482; transposase, IS30 family
D SOJ16_002385 IS110 family transposase K07486 K07486; transposase
D SOJ16_000926 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D SOJ16_002365 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D SOJ16_000031 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D SOJ16_000081 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D SOJ16_000360 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D SOJ16_000668 IS256 family transposase K07493 K07493; putative transposase
D SOJ16_000432 IS256 family transposase K07493 K07493; putative transposase
D SOJ16_000927 transposase K07496 K07496; putative transposase
D SOJ16_002364 tnpB; IS200/IS605 family element RNA-guided endonuclease TnpB K07496 K07496; putative transposase
D SOJ16_002475 transposase K07496 K07496; putative transposase
D SOJ16_000032 transposase K07496 K07496; putative transposase
D SOJ16_000082 tnpB; IS200/IS605 family element RNA-guided endonuclease TnpB K07496 K07496; putative transposase
D SOJ16_000316 transposase K07496 K07496; putative transposase
D SOJ16_002007 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D SOJ16_000212 PspA/IM30 family protein K03969 pspA; phage shock protein A
D SOJ16_001091 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SOJ16_000678 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SOJ16_001446 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D SOJ16_002753 jag; RNA-binding cell elongation regulator Jag/EloR K06346 jag; spoIIIJ-associated protein
D SOJ16_002566 nucleoside recognition domain-containing protein K06373 spmA; spore maturation protein A
D SOJ16_002565 nucleoside recognition protein K06374 spmB; spore maturation protein B
D SOJ16_001659 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D SOJ16_000051 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D SOJ16_001789 spoIIP; stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D SOJ16_001952 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D SOJ16_000953 AAA family ATPase K06390 spoIIIAA; stage III sporulation protein AA
D SOJ16_000954 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D SOJ16_000955 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D SOJ16_000956 SpoIIIAC/SpoIIIAD family protein K06393 spoIIIAD; stage III sporulation protein AD
D SOJ16_000957 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D SOJ16_000959 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D SOJ16_000960 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D SOJ16_002614 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D SOJ16_002721 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D SOJ16_002723 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D SOJ16_000941 dpsA; dipicolinate synthase subunit DpsA K06410 spoVFA; dipicolinate synthase subunit A
D SOJ16_000942 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D SOJ16_002525 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G
D SOJ16_001112 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D SOJ16_002727 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D SOJ16_001182 alpha/beta-type small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D SOJ16_001791 small, acid-soluble spore protein, alpha/beta type K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D SOJ16_001227 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D SOJ16_002758 spore germination protein K06295 gerKA; spore germination protein KA
D SOJ16_002760 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC
D SOJ16_000830 GerMN domain-containing protein K06298 gerM; germination protein M
D SOJ16_001955 spore germination protein K06310 yndD; spore germination protein
D SOJ16_001792 ypeB; germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D SOJ16_000729 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D SOJ16_002234 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D SOJ16_001228 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SOJ16_002601 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D SOJ16_002569 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D SOJ16_002425 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D SOJ16_001443 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D SOJ16_000390 bacteriohemerythrin K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SOJ16_000600 phosphatase K04477 ycdX; putative hydrolase
D SOJ16_000886 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D SOJ16_001187 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D SOJ16_002622 SufD family Fe-S cluster assembly protein K09014 sufB; Fe-S cluster assembly protein SufB
D SOJ16_000560 phosphoribosyltransferase family protein K07100 K07100; putative phosphoribosyl transferase
D SOJ16_001160 VOC family protein K04750 phnB; PhnB protein
D SOJ16_000015 LemA family protein K03744 lemA; LemA protein
D SOJ16_000501 DedA family protein K03975 dedA; membrane-associated protein
D SOJ16_000165 SHOCT domain-containing protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D SOJ16_000603 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein
D SOJ16_000016 TPM domain-containing protein K06872 K06872; uncharacterized protein
D SOJ16_002369 phosphohydrolase K06885 K06885; uncharacterized protein
D SOJ16_002322 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D SOJ16_002648 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D SOJ16_001699 ATP-binding protein K06921 K06921; uncharacterized protein
D SOJ16_000233 ATP-binding protein K06921 K06921; uncharacterized protein
D SOJ16_001561 ATP-binding protein K06923 K06923; uncharacterized protein
D SOJ16_000980 CoA-binding protein K06929 K06929; uncharacterized protein
D SOJ16_002412 DUF134 domain-containing protein K06933 K06933; uncharacterized protein
D SOJ16_000932 KH domain-containing protein K06960 K06960; uncharacterized protein
D SOJ16_002142 NYN domain-containing protein K06962 K06962; uncharacterized protein
D SOJ16_000993 zinc metallopeptidase K06973 K06973; uncharacterized protein
D SOJ16_000419 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D SOJ16_001933 MBL fold metallo-hydrolase K07041 K07041; uncharacterized protein
D SOJ16_000448 amidohydrolase family protein K07045 K07045; uncharacterized protein
D SOJ16_001151 TatD family hydrolase K07051 K07051; uncharacterized protein
D SOJ16_001575 DUF3368 domain-containing protein K07066 K07066; uncharacterized protein
D SOJ16_000866 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D SOJ16_002213 aldo/keto reductase K07079 K07079; uncharacterized protein
D SOJ16_002646 permease K07089 K07089; uncharacterized protein
D SOJ16_002330 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SOJ16_000833 metallophosphoesterase K07095 K07095; uncharacterized protein
D SOJ16_002599 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D SOJ16_001643 ATP-binding protein K07133 K07133; uncharacterized protein
D SOJ16_001916 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D SOJ16_002339 DUF362 domain-containing protein K07138 K07138; uncharacterized protein
D SOJ16_002634 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D SOJ16_002755 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D SOJ16_000289 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D SOJ16_001150 DsrE family protein K09004 K09004; uncharacterized protein
D SOJ16_001225 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D SOJ16_000677 UPF0182 family protein K09118 K09118; uncharacterized protein
D SOJ16_001341 pyruvate kinase alpha/beta domain-containing protein K09126 K09126; uncharacterized protein
D SOJ16_000735 DUF402 domain-containing protein K09145 K09145; uncharacterized protein
D SOJ16_002233 DUF711 family protein K09157 K09157; uncharacterized protein
D SOJ16_002368 hypothetical protein K09388 K09388; uncharacterized protein
D SOJ16_000204 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein
D SOJ16_002258 FapA family protein K09749 K09749; uncharacterized protein
D SOJ16_001052 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein
D SOJ16_000466 YaaR family protein K09770 K09770; uncharacterized protein
D SOJ16_001242 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D SOJ16_000929 sigma factor-like helix-turn-helix DNA-binding protein K09787 K09787; uncharacterized protein
D SOJ16_000422 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D SOJ16_002523 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D SOJ16_001593 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D SOJ16_002347 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D SOJ16_000508 phosphatidylglycerol lysyltransferase domain-containing protein K01163 K01163; uncharacterized protein
D SOJ16_001067 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D SOJ16_001445 DUF47 family protein K07220 K07220; uncharacterized protein
D SOJ16_001002 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024