+D GENES KO #

  KEGG Orthology (KO) - Cuniculiplasma divulgatum

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cdiv00010] D CPM_0583 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CPM_0635 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D CPM_1383 bifunctional fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CPM_1578 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CPM_0301 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D CPM_0430 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CPM_0661 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0793 phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0802 phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0369 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CPM_1290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPM_1477 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPM_0519 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CPM_0222 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPM_0221 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPM_0220 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoyl acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0252 2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_1378 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_0253 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1377 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1208 propanol-preferring alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CPM_0895 alcohol dehydrogenase (NADP+) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0225 acetyl CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D CPM_1298 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_1336 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cdiv00020] D CPM_0176 2-methylcitrate synthase/citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CPM_1891 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CPM_0277 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CPM_0214 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0252 2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_1378 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_0253 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1377 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1357 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CPM_1358 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPM_0458 succinate dehydrogenase/fumarate reductase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPM_0459 succinate dehydrogenase/fumarate reductase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPM_0403 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPM_1336 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CPM_0222 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPM_0221 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPM_0220 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoyl acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cdiv00030] D CPM_0635 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D CPM_0235 pentose-5-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CPM_0839 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CPM_0840 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CPM_0838 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CPM_1195 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_1807 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CPM_1797 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D CPM_0706 glucose 1-dehydrogenase K18124 gdh2; glucose/galactose 1-dehydrogenase (NADP+) [EC:1.1.1.360] D CPM_1948 mandelate racemase subfamily of enolase superfamily enzyme K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140] D CPM_1115 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D CPM_1383 bifunctional fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] C 00040 Pentose and glucuronate interconversions D CPM_0235 pentose-5-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cdiv00051] D CPM_0635 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_1906 mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CPM_1383 bifunctional fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CPM_1578 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:cdiv00052] D CPM_1298 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CPM_1129 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CPM_0046 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CPM_1013 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_0583 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CPM_0129 family 1 glycoside hydrolase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_0938 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_1620 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_0103 alpha-glucosidase, family 31 of glycosyl hydrolase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D CPM_0706 glucose 1-dehydrogenase K18124 gdh2; glucose/galactose 1-dehydrogenase (NADP+) [EC:1.1.1.360] D CPM_1948 mandelate racemase subfamily of enolase superfamily enzyme K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140] D CPM_1301 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CPM_1613 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CPM_1637 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cdiv00500] D CPM_1301 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CPM_1613 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CPM_1637 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CPM_1882 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CPM_1880 maltose alpha-D-glucosyltransferase/alpha-amylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D CPM_1614 glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CPM_0471 glycosyl hydrolase family 15 K01178 SGA1; glucoamylase [EC:3.2.1.3] D CPM_1879 trehalose synthase-like protein K16146 pep2; maltokinase [EC:2.7.1.175] D CPM_1881 1,4-alpha-glucan branching enzyme K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CPM_0178 bifunctional 4-alpha-glucanotransferase/amylo-alpha-1,6-glucosidase K01214 ISA; isoamylase [EC:3.2.1.68] D CPM_0718 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D CPM_0719 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D CPM_1525 trehalose-6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CPM_1524 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_0583 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CPM_0635 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cdiv00520] D CPM_1642 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CPM_1632 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CPM_0783 glucosamine 6-phosphate synthase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPM_1631 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPM_1633 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D CPM_0583 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_0417 nucleoside-diphosphate-sugar epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D CPM_1129 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CPM_0046 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CPM_1013 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CPM_0635 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D CPM_1906 mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:cdiv00620] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0252 2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_1378 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_0253 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1377 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_0222 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPM_0221 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPM_0220 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoyl acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_1208 propanol-preferring alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CPM_0895 alcohol dehydrogenase (NADP+) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CPM_1477 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPM_1073 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CPM_0225 acetyl CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D CPM_1628 L-lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D CPM_0323 glyoxalase-like domain protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CPM_0175 metal-dependent hydrolase of the beta-lactamase superfamily II K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CPM_1459 rhodanese homology domain fused to Zn-dependent hydrolase of glyoxylase family K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CPM_0285 metal-dependent hydrolase of the beta-lactamase superfamily II K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CPM_0835 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CPM_0403 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPM_1336 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CPM_0519 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cdiv00630] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0403 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPM_0176 2-methylcitrate synthase/citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CPM_1891 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CPM_0277 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0921 isobutyryl-CoA mutase subunit B K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CPM_0920 isobutyryl-CoA mutase subunit A K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CPM_1575 FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D CPM_0758 phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D CPM_1895 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CPM_1945 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_0478 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_0410 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CPM_0411 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CPM_1943 glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0396 glycine cleavage system H protein (lipoate-binding) K02437 gcvH; glycine cleavage system H protein D CPM_1115 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:cdiv00640] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_1073 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CPM_0225 acetyl CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0018 acetylornithine/N-succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CPM_0921 isobutyryl-CoA mutase subunit B K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CPM_0920 isobutyryl-CoA mutase subunit A K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CPM_1358 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPM_1357 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CPM_1493 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CPM_1494 carboxyvinyl-carboxyphosphonate phosphorylmutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:cdiv00650] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0579 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CPM_0853 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CPM_0854 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CPM_1694 3-hydroxyacyl-CoA dehydrogenase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CPM_0458 succinate dehydrogenase/fumarate reductase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPM_0459 succinate dehydrogenase/fumarate reductase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPM_1418 PLP-dependent glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CPM_0018 acetylornithine/N-succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CPM_0344 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CPM_0252 2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_1378 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_0253 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1377 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_0196 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D CPM_0345 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cdiv00660] D CPM_0345 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CPM_1358 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPM_1357 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CPM_1675 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] C 00562 Inositol phosphate metabolism [PATH:cdiv00562] D CPM_1498 inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CPM_1578 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cdiv00190] D CPM_1707 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CPM_1706 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D CPM_1705 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D CPM_1703 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CPM_1701 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CPM_1702 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CPM_1700 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CPM_1699 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CPM_1698 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CPM_1697 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CPM_1708 NADH dehydrogenase subunit A K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2] D CPM_0458 succinate dehydrogenase/fumarate reductase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPM_0459 succinate dehydrogenase/fumarate reductase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPM_1309 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CPM_1311 heme/copper-type cytochrome/quinol oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CPM_1312 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CPM_0595 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPM_0524 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPM_0525 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CPM_1930 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CPM_0038 A-type Na(+),H(+)-transporting-ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CPM_0039 A-type Na(+),H(+)-transporting-ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CPM_0036 A-type Na(+),H(+)-transporting-ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D CPM_0040 A-type Na(+),H(+)-transporting-ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CPM_0035 A-type Na(+),H(+)-transporting-ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CPM_0041 A-type Na(+),H(+)-transporting-ATP synthase subunit H K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D CPM_0042 A-type Na(+),H(+)-transporting-ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CPM_0034 A-type Na(+),H(+)-transporting-ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CPM_0095 H(+)-transporting P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D CPM_0444 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:cdiv00720] D CPM_0519 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CPM_0403 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPM_0458 succinate dehydrogenase/fumarate reductase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPM_0459 succinate dehydrogenase/fumarate reductase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPM_1357 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CPM_1358 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPM_0172 3-hydroxyacyl-CoA dehydrogenase K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0252 2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_1378 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CPM_0253 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_1377 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CPM_0214 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CPM_0277 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CPM_0774 acryloyl-coenzyme A reductase K15020 K15020; acryloyl-coenzyme A reductase [EC:1.3.1.84] D CPM_0920 isobutyryl-CoA mutase subunit A K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CPM_0921 isobutyryl-CoA mutase subunit B K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CPM_1063 formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CPM_0707 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:cdiv00680] D CPM_1945 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_0478 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_1115 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D CPM_1290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPM_0403 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPM_1383 bifunctional fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0661 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0793 phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0802 phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0369 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CPM_0956 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CPM_0814 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CPM_0200 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D CPM_1676 3-isopropylmalate dehydratase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] C 00910 Nitrogen metabolism [PATH:cdiv00910] D CPM_1207 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CPM_1895 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CPM_0352 oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CPM_1714 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:cdiv00920] D CPM_1916 sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CPM_1798 sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CPM_1392 sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CPM_0526 sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CPM_0851 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CPM_0168 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CPM_0697 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cdiv00061] D CPM_1229 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CPM_0324 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPM_1227 short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPM_1104 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cdiv00071] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1816 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_1874 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_0442 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D CPM_1104 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CPM_1208 propanol-preferring alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cdiv00561] D CPM_1115 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D CPM_0895 alcohol dehydrogenase (NADP+) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CPM_0417 nucleoside-diphosphate-sugar epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D CPM_0103 alpha-glucosidase, family 31 of glycosyl hydrolase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cdiv00564] D CPM_0517 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CPM_0518 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CPM_0156 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D CPM_1185 geranylgeranylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D CPM_1186 digeranylgeranylglyceryl phosphate synthase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D CPM_1888 CDP-diglyceride synthetase K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D CPM_0894 digeranylgeranylglycerophospholipid reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] D CPM_0485 digeranylgeranylglycerophospholipid reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] D CPM_0295 digeranylgeranylglycerophospholipid reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:cdiv00600] D CPM_0129 family 1 glycoside hydrolase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_0938 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_1620 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_0103 alpha-glucosidase, family 31 of glycosyl hydrolase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:cdiv00592] D CPM_1816 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_1874 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cdiv00230] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_1807 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CPM_1540 glutamine phosphoribosylpyrophosphate amidotransferase self-processing precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CPM_0826 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CPM_1738 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CPM_1183 phosphoribosylformylglycinamidine (FGAM) synthase subunit PurQ K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CPM_1184 phosphoribosylformylglycinamidine (FGAM) synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CPM_1380 phosphoribosylformylglycinamidine (FGAM) synthase subunit PurL K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CPM_0274 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CPM_0470 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CPM_0469 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CPM_1140 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CPM_0879 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CPM_0005 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CPM_1288 ribokinase K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-] D CPM_0511 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CPM_1341 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPM_0503 nucleotidyl transferase superfamily protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D CPM_1670 HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CPM_0431 NUDIX family hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D CPM_0866 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPM_0498 GMP synthase subunit B K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPM_1941 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPM_0212 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CPM_1545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPM_0359 nucleotide kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D CPM_1188 predicted nucleotide kinase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D CPM_1714 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:cdiv00240] D CPM_0294 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CPM_0293 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CPM_1113 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CPM_1112 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CPM_0759 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CPM_0762 dihydroorotate dehydrogenase (fumarate) K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CPM_0761 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D CPM_1901 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CPM_1904 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CPM_1376 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CPM_1341 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPM_0431 NUDIX family hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D CPM_0024 CTP synthase (UTP-ammonia lyase) K01937 pyrG; CTP synthase [EC:6.3.4.2] D CPM_1543 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CPM_1288 ribokinase K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-] D CPM_1941 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPM_1384 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CPM_0167 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cdiv00250] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CPM_0155 isoaspartyl dipeptidase (threonine type) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CPM_1406 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CPM_0521 predicted amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D CPM_1863 ornithine cyclodeaminase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] D CPM_1834 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CPM_0542 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CPM_0541 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CPM_0212 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CPM_0879 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CPM_1113 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CPM_1112 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CPM_1418 PLP-dependent glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CPM_0018 acetylornithine/N-succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CPM_0344 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CPM_0352 oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CPM_1207 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CPM_1334 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D CPM_1895 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CPM_0294 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CPM_0293 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CPM_1380 phosphoribosylformylglycinamidine (FGAM) synthase subunit PurL K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CPM_0783 glucosamine 6-phosphate synthase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPM_1631 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPM_1540 glutamine phosphoribosylpyrophosphate amidotransferase self-processing precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cdiv00260] D CPM_0382 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPM_0383 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPM_0590 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CPM_0698 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CPM_0012 threonine synthase and cysteate synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CPM_1395 threonine synthase and cysteate synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CPM_1945 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_0478 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_1115 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D CPM_0661 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0793 phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0802 phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_0369 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CPM_0956 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CPM_0814 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CPM_0288 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CPM_0410 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CPM_0411 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CPM_1943 glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0396 glycine cleavage system H protein (lipoate-binding) K02437 gcvH; glycine cleavage system H protein D CPM_0210 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CPM_1485 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CPM_1486 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cdiv00270] D CPM_1041 5-methyltetrahydropteroyltriglutamate homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_1926 cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_1927 predicted SAM recycling pathway cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_1495 5-methyltetrahydropteroyltriglutamate homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_0006 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CPM_1338 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CPM_1668 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CPM_0414 5'-deoxy-5'-methylthioadenosine phosphorylase II K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D CPM_0750 6-aminodeoxyfutalosine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CPM_1520 S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D CPM_1786 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D CPM_1788 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D CPM_1787 cupin K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D CPM_0804 GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D CPM_0368 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CPM_0382 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPM_0383 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPM_0590 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CPM_0168 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CPM_0697 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CPM_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CPM_0851 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CPM_0403 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPM_0855 cysteine synthase A K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D CPM_0956 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:cdiv00280] D CPM_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0442 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D CPM_0632 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D CPM_1816 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_1874 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_0921 isobutyryl-CoA mutase subunit B K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CPM_0920 isobutyryl-CoA mutase subunit A K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CPM_1841 beta-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0196 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cdiv00290] D CPM_0210 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CPM_1675 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CPM_0345 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CPM_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:cdiv00300] D CPM_0590 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CPM_0382 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPM_0383 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPM_1922 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CPM_0812 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CPM_1647 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CPM_1676 3-isopropylmalate dehydratase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] D CPM_0502 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D CPM_0549 alpha-aminoadipate carrier protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D CPM_0545 alpha-aminoadipate--LysW ligase LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D CPM_0547 acetylglutamate/LysW-gamma-L-alpha-aminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D CPM_0548 N-acetyl-gamma-glutamyl-phosphate/LysW-gamma-L-alpha-aminoadipyl-6-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D CPM_0546 acetylornithine/LysW-gamma-L-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D CPM_0544 LysW-gamma-L-lysine carboxypeptidase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00310 Lysine degradation [PATH:cdiv00310] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0344 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:cdiv00220] D CPM_1356 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CPM_0542 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CPM_0541 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CPM_0634 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D CPM_1380 phosphoribosylformylglycinamidine (FGAM) synthase subunit PurL K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CPM_1895 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CPM_1207 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CPM_1714 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CPM_0549 alpha-aminoadipate carrier protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D CPM_0547 acetylglutamate/LysW-gamma-L-alpha-aminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D CPM_0548 N-acetyl-gamma-glutamyl-phosphate/LysW-gamma-L-alpha-aminoadipyl-6-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D CPM_0546 acetylornithine/LysW-gamma-L-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D CPM_0544 LysW-gamma-L-lysine carboxypeptidase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:cdiv00330] D CPM_0696 N-methylhydantoinase A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D CPM_0695 N-methylhydantoinase B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D CPM_1327 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D CPM_1440 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D CPM_1668 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CPM_1338 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CPM_0426 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D CPM_1334 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cdiv00340] D CPM_1589 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CPM_1907 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CPM_1839 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CPM_0208 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] C 00350 Tyrosine metabolism [PATH:cdiv00350] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CPM_0799 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D CPM_0797 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D CPM_1208 propanol-preferring alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CPM_0344 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:cdiv00360] D CPM_0579 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CPM_0853 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CPM_0799 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D CPM_0134 glycine/D-amino acid oxidase (deaminating) K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CPM_0104 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:cdiv00380] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0104 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cdiv00400] D CPM_1915 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CPM_1479 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CPM_1725 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CPM_1727 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CPM_1728 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CPM_0380 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CPM_1482 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CPM_1481 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CPM_1484 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CPM_1483 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D CPM_1480 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CPM_1485 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CPM_1486 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cdiv00410] D CPM_1418 PLP-dependent glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CPM_0018 acetylornithine/N-succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] C 00430 Taurine and hypotaurine metabolism [PATH:cdiv00430] D CPM_1418 PLP-dependent glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CPM_0731 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CPM_1863 ornithine cyclodeaminase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cdiv00450] D CPM_0168 cystathionine beta-lyase/cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CPM_0697 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CPM_1041 5-methyltetrahydropteroyltriglutamate homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_1926 cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_1927 predicted SAM recycling pathway cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_1495 5-methyltetrahydropteroyltriglutamate homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CPM_0643 SufS subfamily cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CPM_0858 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CPM_0184 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cdiv00460] D CPM_0731 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CPM_0155 isoaspartyl dipeptidase (threonine type) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CPM_1945 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_0478 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cdiv00470] D CPM_1380 phosphoribosylformylglycinamidine (FGAM) synthase subunit PurL K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CPM_1634 enolase superfamily enzyme K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D CPM_1647 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CPM_0134 glycine/D-amino acid oxidase (deaminating) K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:cdiv00480] D CPM_0731 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CPM_0214 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CPM_1668 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cdiv00511] D CPM_0129 family 1 glycoside hydrolase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_0938 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_1620 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CPM_0538 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cdiv00730] D CPM_1259 tRNA S(4)U 4-thiouridine synthase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CPM_1177 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CPM_1188 predicted nucleotide kinase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D CPM_1545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cdiv00740] D CPM_0705 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CPM_0367 5-amino-6-(5-phosphoribosylamino)uracil reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D CPM_1084 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D CPM_1081 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CPM_1082 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CPM_1181 riboflavin kinase K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D CPM_1083 FAD synthetase K14656 ribL; FAD synthetase [EC:2.7.7.2] D CPM_0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:cdiv00750] D CPM_0012 threonine synthase and cysteate synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CPM_1395 threonine synthase and cysteate synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CPM_1450 pyridoxal phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D CPM_1944 pyridoxal phosphate synthase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cdiv00760] D CPM_1143 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CPM_0811 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D CPM_0708 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CPM_1497 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CPM_0344 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:cdiv00770] D CPM_0345 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CPM_1817 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CPM_0522 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CPM_0503 nucleotidyl transferase superfamily protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D CPM_1268 hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D CPM_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:cdiv00780] D CPM_0324 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPM_1227 short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00785 Lipoic acid metabolism [PATH:cdiv00785] D CPM_1335 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CPM_0218 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CPM_0223 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0222 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPM_0221 2-oxoacid dehydrogenase multienzyme complex, 2-oxoacid decarboxylase (E1) component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPM_0220 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoyl acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPM_0410 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CPM_0411 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CPM_1943 glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CPM_0396 glycine cleavage system H protein (lipoate-binding) K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cdiv00790] D CPM_0492 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CPM_1446 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CPM_0705 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CPM_0405 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CPM_0760 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CPM_0404 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CPM_1080 GTP cyclohydrolase IV K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D CPM_1189 hypothetical protein K09739 mptD; dihydroneopterin aldolase [EC:4.1.2.25] D CPM_0199 Rossmann fold enzyme K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] C 00670 One carbon pool by folate [PATH:cdiv00670] D CPM_1063 formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CPM_0707 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CPM_1945 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_0478 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPM_1738 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CPM_0005 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CPM_0208 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D CPM_1943 glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cdiv00860] D CPM_1095 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPM_0753 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CPM_1506 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CPM_0401 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CPM_1507 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CPM_1508 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CPM_0829 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CPM_0828 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CPM_1409 radical SAM superfamily enzyme K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D CPM_1309 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CPM_1868 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CPM_1878 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CPM_1090 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CPM_1089 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CPM_1293 GTP:adenosylcobinamide-phosphate guanylyltransferase K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D CPM_1092 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CPM_1151 phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CPM_1091 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cdiv00130] D CPM_0591 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CPM_0592 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CPM_0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CPM_1487 methylase involved in ubiquinone/menaquinone biosynthesis K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CPM_1663 N-acylamino acid racemase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CPM_0510 solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D CPM_0509 aminofutalosine synthase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CPM_0508 dehypoxanthinylfutalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D CPM_1716 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] D CPM_0799 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cdiv00900] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0196 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D CPM_1100 hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D CPM_0049 isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D CPM_0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CPM_0451 mevalonate pyrophosphate decarboxylase K18689 E2.7.1.185; mevalonate-3-kinase [EC:2.7.1.185] D CPM_0343 2-phosphoglycerate kinase K18690 E2.7.1.186; mevalonate-3-phosphate-5-kinase [EC:2.7.1.186] D CPM_0958 mevalonate pyrophosphate decarboxylase K22813 E4.1.1.110; bisphosphomevalonate decarboxylase [EC:4.1.1.110] D CPM_0048 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CPM_0281 type I geranylgeranyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CPM_0626 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CPM_0361 geranylgeranyl-diphosphate specific tritrans,polycis-undecaprenyl-diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:cdiv00906] D CPM_0974 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CPM_0973 phytoene desaturase K20611 crtD; 1-hydroxy-2-isopentenylcarotenoid 3,4-desaturase [EC:1.3.99.37] D CPM_0972 fatty acid hydroxylase superfamily enzyme K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:cdiv00907] D CPM_1816 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_1874 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CPM_0839 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CPM_0840 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cdiv00523] D CPM_0387 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CPM_1055 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CPM_1056 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CPM_0388 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CPM_1055 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D CPM_0311 self-cleaving precursor protein of N-terminal nucleophile acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cdiv00261] D CPM_0382 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPM_0383 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPM_1922 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cdiv00521] D CPM_0583 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CPM_0370 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CPM_1498 inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CPM_0387 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CPM_1055 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CPM_1056 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CPM_0388 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CPM_0583 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cdiv00525] D CPM_0387 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CPM_1055 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CPM_1482 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CPM_1481 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CPM_0324 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPM_1227 short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites D CPM_0006 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cdiv00362] D CPM_1816 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_1874 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_0796 Alcohol dehydrogenase, class IV K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D CPM_0579 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CPM_0853 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D CPM_0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:cdiv00364] D CPM_1355 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CPM_0796 Alcohol dehydrogenase, class IV K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:cdiv00625] D CPM_1208 propanol-preferring alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cdiv00361] D CPM_1355 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CPM_0796 Alcohol dehydrogenase, class IV K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00623 Toluene degradation [PATH:cdiv00623] D CPM_1355 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CPM_0796 Alcohol dehydrogenase, class IV K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D CPM_1816 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CPM_1874 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:cdiv00643] D CPM_0797 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D CPM_1073 coenzyme A transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cdiv00626] D CPM_1208 propanol-preferring alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cdiv03020] D CPM_1516 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D CPM_1515 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D CPM_1514 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D CPM_1499 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D CPM_1266 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D CPM_0337 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D CPM_1517 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D CPM_0185 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D CPM_1471 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D CPM_0334 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:cdiv03022] D CPM_0868 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D CPM_0506 TATA-box binding protein (TBP), component of TFIID and TFIIIB K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D CPM_0284 nucleotide excision repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cdiv03010] D CPM_0499 30S ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2 D CPM_1564 30S ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3 D CPM_1501 30S ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4 D CPM_1549 30S ribosomal protein S5p K02988 RP-S5; small subunit ribosomal protein S5 D CPM_0257 30S ribosomal protein S7p K02992 RP-S7; small subunit ribosomal protein S7 D CPM_1554 30S ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8 D CPM_1472 30S ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9 D CPM_1397 30S ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10 D CPM_1500 30S ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11 D CPM_0256 30S ribosomal protein S12p K02950 RP-S12; small subunit ribosomal protein S12 D CPM_1502 30S ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13 D CPM_1555 30S ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14 D CPM_1318 30S ribosomal protein S15p K02956 RP-S15; small subunit ribosomal protein S15 D CPM_1560 30S ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17 D CPM_1566 30S ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19 D CPM_1399 30S ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D CPM_1557 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D CPM_1680 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D CPM_0728 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D CPM_1175 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D CPM_1896 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D CPM_1269 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D CPM_1532 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D CPM_1270 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D CPM_1343 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D CPM_0202 50S ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1 D CPM_1567 50S ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2 D CPM_1570 50S ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3 D CPM_1556 50S ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5 D CPM_1553 50S ribosomal protein L6p K02933 RP-L6; large subunit ribosomal protein L6 D CPM_0203 acidic ribosomal protein P0 K02864 RP-L10; large subunit ribosomal protein L10 D CPM_0201 50S ribosomal protein L11p K02867 RP-L11; large subunit ribosomal protein L11 D CPM_0204 50S ribosomal protein L12p K02869 RP-L12; large subunit ribosomal protein L12 D CPM_1473 50S ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13 D CPM_1559 50S ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14 D CPM_1547 50S ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15 D CPM_1550 50S ribosomal protein L18p K02881 RP-L18; large subunit ribosomal protein L18 D CPM_1565 50S ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22 D CPM_1568 50S ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23 D CPM_1558 50S ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24 D CPM_1563 50S ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29 D CPM_1548 50S ribosomal protein L30p K02907 RP-L30; large subunit ribosomal protein L30 D CPM_1569 50S ribosomal protein L4p K02930 RP-L4e; large subunit ribosomal protein L4e D CPM_1344 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D CPM_1442 50S ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e D CPM_0435 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D CPM_1474 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D CPM_1551 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D CPM_0336 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D CPM_1342 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D CPM_1899 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D CPM_1552 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D CPM_1539 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D CPM_0333 50S ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D CPM_1898 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D CPM_1381 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D CPM_0600 50S ribosomal protein L41e K02928 RP-L41e; large subunit ribosomal protein L41e D CPM_1533 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D CPM_0188 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CPM_1884 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cdiv00970] D CPM_1741 tRNA_Ala(CGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPM_0050 tRNA_Ala(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPM_0714 tRNA_Ala(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPM_0407 tRNA_Arg(CCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_0891 tRNA_Arg(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1068 tRNA_Arg(GCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1077 tRNA_Arg(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1348 tRNA_Arg(TCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1237 tRNA_Asn(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CPM_1261 tRNA_Asp(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CPM_0272 tRNA_Gln(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPM_0700 tRNA_Gln(CTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPM_0685 tRNA_Glu(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CPM_1209 tRNA_Gly(CCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPM_0724 tRNA_Gly(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPM_0726 tRNA_His(GTG); tRNA-His K14226 tRNA-His; tRNA His D CPM_0224 tRNA_Ile(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CPM_0875 tRNA_Leu(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_0630 tRNA_Leu(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_1936 tRNA_Leu(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_0885 tRNA_Leu(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_1579 tRNA_Lys(CTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPM_1518 tRNA_Lys(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPM_1239 tRNA_Ile(CAT); tRNA-Ile K14230 tRNA-Met; tRNA Met D CPM_1509 tRNA_iMet(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met D CPM_1400 tRNA_Met(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met D CPM_0268 tRNA_Phe(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CPM_1470 tRNA_Pro(GGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPM_1803 tRNA_Pro(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPM_1437 tRNA_Pro(CGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPM_1832 tRNA_Ser(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_0248 tRNA_Ser(CGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_1103 tRNA_Ser(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_0434 tRNA_Ser(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_0530 tRNA_Thr(CGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPM_1910 tRNA_Thr(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPM_1106 tRNA_Thr(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPM_1200 tRNA_Tyr(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CPM_0154 tRNA_Val(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val D CPM_0681 tRNA_Val(CAC); tRNA-Val K14237 tRNA-Val; tRNA Val D CPM_0577 tRNA_Val(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val D CPM_1095 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPM_1660 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CPM_1710 glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D CPM_1709 glutamyl-tRNA(Gln) amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D CPM_0376 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPM_0581 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CPM_0830 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CPM_1404 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CPM_0298 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPM_1600 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPM_0354 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPM_1145 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPM_0184 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPM_0015 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPM_1328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPM_1178 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPM_0183 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D CPM_1729 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPM_0813 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPM_0494 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPM_0751 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPM_1323 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPM_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPM_1862 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cdiv03060] D CPM_1546 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPM_0327 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPM_1087 ffs; archaeal signal recognition particle RNA K01983 ffs; SRP RNA D CPM_0428 signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CPM_0189 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D CPM_0625 ArsA family efflux pump ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CPM_1692 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CPM_1693 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cdiv04122] D CPM_0851 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CPM_1917 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CPM_0773 adenylyltransferase and sulfurtransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CPM_1259 tRNA S(4)U 4-thiouridine synthase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome [PATH:cdiv03050] D CPM_0246 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D CPM_1136 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:cdiv03018] D CPM_1349 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4 D CPM_0330 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D CPM_0332 exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42 D CPM_0331 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D CPM_1290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPM_1492 superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CPM_1166 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK B B 09124 Replication and repair C 03030 DNA replication [PATH:cdiv03030] D CPM_1686 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CPM_0282 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CPM_1722 family B DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D CPM_0484 family B DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D CPM_0598 family D DNA polymerase small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D CPM_0025 family D DNA polymerase large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D CPM_1489 DNA replication licensing factor MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D CPM_0887 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D CPM_0730 DNA primase large subunit K18882 priL; DNA primase large subunit D CPM_0408 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D CPM_1739 replication factor C small subunit K04801 rfcS; replication factor C small subunit D CPM_0437 replication factor C large subunit K04800 rfcL; replication factor C large subunit D CPM_0816 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CPM_0455 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:cdiv03410] D CPM_0325 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CPM_0408 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D CPM_0816 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CPM_0455 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D CPM_1597 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CPM_1809 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CPM_1411 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CPM_1685 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPM_0528 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPM_1319 single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:cdiv03420] D CPM_0775 UvrD helicase/Cas4 nuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPM_0284 nucleotide excision repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CPM_0408 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D CPM_0455 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:cdiv03430] D CPM_0775 UvrD helicase/Cas4 nuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPM_1319 single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPM_0468 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0587 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0408 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D CPM_0455 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination D CPM_1319 single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03450 Non-homologous end-joining D CPM_0816 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D CPM_1267 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D CPM_0190 transcription antiterminator NusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cdiv02010] D CPM_1246 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1365 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1615 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1638 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1618 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CPM_1617 CUT1 family ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CPM_1616 CUT1 family ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CPM_0847 CUT1 family ABC transporter substrate-binding component K17311 treS; trehalose transport system substrate-binding protein D CPM_0844 CUT1 family ABC transporter permease K17312 treT; trehalose transport system permease protein D CPM_0845 CUT1 family ABC transporter permease K17313 treU; trehalose transport system permease protein D CPM_0846 CUT1 family ABC transporter ATPase K17314 treV; trehalose transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:cdiv03070] D CPM_1546 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPM_0428 signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CPM_0327 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPM_1692 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CPM_1693 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cdiv02020] D CPM_0767 potassium-transporting P-type ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D CPM_0766 potassium-transporting P-type ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D CPM_0765 potassium-transporting P-type ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D CPM_0835 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CPM_1895 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0595 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPM_0524 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPM_0525 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cdiv02024] D CPM_1482 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CPM_1481 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CPM_1418 PLP-dependent glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D CPM_1104 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CPM_0705 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CPM_0123 PepT family ABC transporter substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPM_0932 PepT family ABC transporter substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPM_0124 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_0933 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_0307 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_1818 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_0125 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_0934 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_1819 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_0308 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_0126 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_0936 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_1820 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_0309 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_1546 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPM_0428 signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CPM_0327 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CPM_1290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:cdiv04980] D CPM_1878 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CPM_0922 G-protein chaperone of isobutyryl-CoA mutase K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cdiv01501] D CPM_1642 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cdiv01000] C 01001 Protein kinases [BR:cdiv01001] D CPM_1671 N6-threonylcarbamoyl-adenosine(37)-tRNA synthase subunit Kae1-Bud32 K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1] D CPM_1511 serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:cdiv01009] D CPM_1179 translation initiation factor aIF2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D CPM_0368 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CPM_0805 signal transduction serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CPM_0814 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cdiv01002] D CPM_0207 N-terminal pyroglutamyl peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CPM_0866 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPM_0498 GMP synthase subunit B K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPM_1645 dipeptidyl-peptidase VI K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D CPM_1540 glutamine phosphoribosylpyrophosphate amidotransferase self-processing precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CPM_0783 glucosamine 6-phosphate synthase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPM_1631 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPM_1406 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CPM_1932 tricorn interacting aminopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-] D CPM_1599 tricorn interacting aminopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-] D CPM_1847 tricorn interacting aminopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-] D CPM_0474 tricorn interacting aminopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-] D CPM_0118 metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CPM_1519 metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CPM_1662 M20A subfamily peptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D CPM_0812 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CPM_0166 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CPM_0720 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CPM_0732 Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CPM_0107 Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CPM_1789 Xaa-Pro aminopeptidase non-peptidase homolog K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CPM_0291 subfamily M48B zinc-dependent protease with chaperone function K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CPM_0228 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CPM_1657 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CPM_1687 predicted ATP-dependent protease family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CPM_1286 ATP-dependent protease family S16 K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D CPM_0003 tricorn core peptidase K08676 tri; tricorn protease [EC:3.4.21.-] D CPM_0278 tricorn core peptidase K08676 tri; tricorn protease [EC:3.4.21.-] D CPM_0311 self-cleaving precursor protein of N-terminal nucleophile acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D CPM_1391 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D CPM_1586 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CPM_1655 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CPM_0246 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D CPM_1136 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D CPM_0155 isoaspartyl dipeptidase (threonine type) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CPM_0731 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CPM_0475 U62 family protease subunit A K03592 pmbA; PmbA protein D CPM_0476 U62 family protease subunit B K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:cdiv01003] D CPM_1132 glycosyltransferase K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] D CPM_1322 oligosaccharyltransferase AglB K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D CPM_1125 dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CPM_1524 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cdiv01005] D CPM_1016 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CPM_1017 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cdiv01011] D CPM_1586 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CPM_1655 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CPM_1657 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 01004 Lipid biosynthesis proteins [BR:cdiv01004] D CPM_1229 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CPM_0324 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPM_1227 short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPM_1921 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0020 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CPM_0225 acetyl CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D CPM_1104 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CPM_1230 long-chain acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cdiv01006] D CPM_0281 type I geranylgeranyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CPM_0626 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CPM_0974 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CPM_0591 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CPM_1309 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:cdiv01007] D CPM_0183 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D CPM_1095 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPM_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPM_1862 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CPM_1145 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPM_1729 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPM_0184 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPM_1178 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPM_0015 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPM_1328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPM_0830 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CPM_1404 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CPM_0581 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CPM_0494 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPM_0298 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPM_0354 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPM_0813 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPM_1600 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPM_0376 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPM_0751 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPM_1323 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPM_0809 aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CPM_0288 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CPM_0546 acetylornithine/LysW-gamma-L-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D CPM_0018 acetylornithine/N-succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CPM_1506 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CPM_1869 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 [BR:cdiv00199] C 00194 Photosynthesis proteins [BR:cdiv00194] D CPM_1930 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cdiv03000] D CPM_0506 TATA-box binding protein (TBP), component of TFIID and TFIIIB K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D CPM_1416 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D CPM_1800 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CPM_1387 ArsR family transcriptional regulator K07721 K07721; ArsR family transcriptional regulator D CPM_0027 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D CPM_0260 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D CPM_1811 DtxR family iron (metal) dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CPM_0850 DtxR family metal-dependent transcription regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CPM_0527 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CPM_1636 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CPM_0131 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CPM_1612 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CPM_1243 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CPM_0937 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CPM_0182 orotate phosphoribosyltransferase homolog K26599 gfcR; HTH-type transcriptional regulator, activator of D-glucose/D-fructose catabolism D CPM_0399 transcriptional regulator K07728 K07728; putative transcriptional regulator D CPM_1337 transcriptional regulator K07730 K07730; putative transcriptional regulator D CPM_0427 XRE family transcriptional regulator K07731 K07731; putative transcriptional regulator D CPM_1401 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator C 03021 Transcription machinery [BR:cdiv03021] D CPM_0868 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D CPM_0506 TATA-box binding protein (TBP), component of TFIID and TFIIIB K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D CPM_0284 nucleotide excision repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CPM_1267 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D CPM_0190 transcription antiterminator NusG K15172 SUPT5H; transcription elongation factor SPT5 D CPM_0026 GTPase K24104 GPN; GPN-loop GTPase D CPM_1513 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA D CPM_1515 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D CPM_1514 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D CPM_1516 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D CPM_1499 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D CPM_1266 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D CPM_0337 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D CPM_1517 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D CPM_0185 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D CPM_1471 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D CPM_0334 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D CPM_0328 transcription termination factor Tfs K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:cdiv03019] D CPM_1267 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D CPM_0190 transcription antiterminator NusG K15172 SUPT5H; transcription elongation factor SPT5 D CPM_1373 CDC48 family ATPase of the AAA+ class K13525 VCP; transitional endoplasmic reticulum ATPase D CPM_0317 mRNA surveillance factor aPelota K06965 PELO; protein pelota D CPM_1375 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D CPM_1398 translation elongation factor aEF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D CPM_1349 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4 D CPM_0330 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D CPM_0331 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D CPM_0332 exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42 D CPM_1492 superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CPM_1290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPM_1166 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK C 03041 Spliceosome [BR:cdiv03041] D CPM_0047 C4-type Zn-finger protein K06874 ZPR1; zinc finger protein ZPR1 C 03011 Ribosome [BR:cdiv03011] D CPM_1399 30S ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D CPM_1557 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D CPM_1680 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D CPM_0728 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D CPM_1175 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D CPM_1896 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D CPM_1269 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D CPM_1532 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D CPM_1270 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D CPM_1343 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D CPM_1569 50S ribosomal protein L4p K02930 RP-L4e; large subunit ribosomal protein L4e D CPM_1344 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D CPM_1442 50S ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e D CPM_0435 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D CPM_1474 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D CPM_1551 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D CPM_0336 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D CPM_1342 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D CPM_1899 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D CPM_1552 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D CPM_1539 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D CPM_0333 50S ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D CPM_1898 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D CPM_1381 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D CPM_0600 50S ribosomal protein L41e K02928 RP-L41e; large subunit ribosomal protein L41e D CPM_1533 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D CPM_0499 30S ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2 D CPM_1564 30S ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3 D CPM_1501 30S ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4 D CPM_1549 30S ribosomal protein S5p K02988 RP-S5; small subunit ribosomal protein S5 D CPM_0257 30S ribosomal protein S7p K02992 RP-S7; small subunit ribosomal protein S7 D CPM_1554 30S ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8 D CPM_1472 30S ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9 D CPM_1397 30S ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10 D CPM_1500 30S ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11 D CPM_0256 30S ribosomal protein S12p K02950 RP-S12; small subunit ribosomal protein S12 D CPM_1502 30S ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13 D CPM_1555 30S ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14 D CPM_1318 30S ribosomal protein S15p K02956 RP-S15; small subunit ribosomal protein S15 D CPM_1560 30S ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17 D CPM_1566 30S ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19 D CPM_0202 50S ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1 D CPM_1567 50S ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2 D CPM_1570 50S ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3 D CPM_1556 50S ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5 D CPM_1553 50S ribosomal protein L6p K02933 RP-L6; large subunit ribosomal protein L6 D CPM_0203 acidic ribosomal protein P0 K02864 RP-L10; large subunit ribosomal protein L10 D CPM_0201 50S ribosomal protein L11p K02867 RP-L11; large subunit ribosomal protein L11 D CPM_1473 50S ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13 D CPM_1559 50S ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14 D CPM_1547 50S ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15 D CPM_1550 50S ribosomal protein L18p K02881 RP-L18; large subunit ribosomal protein L18 D CPM_1565 50S ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22 D CPM_1568 50S ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23 D CPM_1558 50S ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24 D CPM_1563 50S ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29 D CPM_1548 50S ribosomal protein L30p K02907 RP-L30; large subunit ribosomal protein L30 D CPM_0204 50S ribosomal protein L12p K02869 RP-L12; large subunit ribosomal protein L12 D CPM_0188 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CPM_1884 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cdiv03009] D CPM_1541 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D CPM_1530 H/ACA RNA-protein site-specific pseudouridylation complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D CPM_0725 EMG1/NEP1 rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D CPM_1510 predicted RNA-binding protein with KH domains K06961 KRR1; ribosomal RNA assembly protein D CPM_1511 serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CPM_0359 nucleotide kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D CPM_0009 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D CPM_0490 ribosome recycling factor ABCE1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D CPM_1094 GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein D CPM_1561 ribonuclease P protein subunit aPop4 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D CPM_1900 translation initiation factor aIF6 K03264 EIF6; translation initiation factor 6 D CPM_0633 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D CPM_0329 SBDS family ribosome maturation protein K14574 SDO1; ribosome maturation protein SDO1 D CPM_1373 CDC48 family ATPase of the AAA+ class K13525 VCP; transitional endoplasmic reticulum ATPase D CPM_0375 RNA 2'-O-methyltransferase fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D CPM_1344 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D CPM_1513 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA D CPM_0339 dimethyladenosine transferase (rRNA methylation) K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CPM_0397 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CPM_1085 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CPM_0286 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CPM_1492 superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CPM_0473 L-threonylcarbamoyladenylate synthase Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CPM_0158 predicted GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:cdiv03016] D CPM_1561 ribonuclease P protein subunit aPop4 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D CPM_0757 ribonuclease P protein subunit aRpr2 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D CPM_0823 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CPM_1398 translation elongation factor aEF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D CPM_1095 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPM_0813 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPM_1178 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPM_1328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPM_0184 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPM_1729 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPM_0376 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPM_0830 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CPM_1404 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CPM_0298 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPM_1600 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPM_0354 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPM_1145 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPM_0015 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPM_0494 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPM_0751 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPM_1323 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPM_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPM_1862 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CPM_0013 D-tyrosyl-tRNA(Tyr) deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CPM_0289 threonyl-and alanyl-tRNA synthetase second additional domain K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D CPM_1445 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D CPM_0181 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CPM_1837 MiaB-like tRNA modifying enzyme K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D CPM_1187 N2,N2-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D CPM_0362 Wybutosine (yW) biosynthesis enzyme, Trm5 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CPM_1114 tRNA(1-methyladenosine) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CPM_0443 Wybutosine (yW) biosynthesis enzyme, Fe-S oxidoreductase K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D CPM_1505 Wybutosine (yW) biosynthesis enzyme, TYW2 transferase K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D CPM_1331 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CPM_1542 H/ACA RNA-protein site-specific pseudouridylation complex component Cbf5p K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CPM_0507 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D CPM_0335 H/ACA RNA-protein complex component Cbf5p K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D CPM_0768 ELP3 family acetyltransferase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D CPM_0473 L-threonylcarbamoyladenylate synthase Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CPM_0270 tRNA nucleotidyltransferase (CCA-adding enzyme) K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D CPM_0500 tRNA splicing endonuclease K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D CPM_0952 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CPM_1806 RNA:NAD 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D CPM_0183 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D CPM_0581 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CPM_1388 methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D CPM_1236 tRNA 2'-O-methylase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D CPM_1917 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CPM_1671 N6-threonylcarbamoyl-adenosine(37)-tRNA synthase subunit Kae1-Bud32 K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1] D CPM_0404 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CPM_0405 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CPM_0760 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CPM_0489 7-cyano-7-deazaguanine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D CPM_1259 tRNA S(4)U 4-thiouridine synthase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CPM_0360 tRNA_Ile(CAT) 2-agmatinylcytidine synthetase K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] C 03012 Translation factors [BR:cdiv03012] D CPM_1512 translation initiation factor aIF1A K03236 EIF1A; translation initiation factor 1A D CPM_1562 translation initiation factor aSUI1 K03113 EIF1; translation initiation factor 1 D CPM_1531 translation initiation factor aIF2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D CPM_1179 translation initiation factor aIF2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D CPM_1681 translation initiation factor aIF2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3 D CPM_1439 translation initiation factor aIF5A K03263 EIF5A; translation initiation factor 5A D CPM_1340 translation initiation factor aIF2/5B K03243 EIF5B; translation initiation factor 5B D CPM_1900 translation initiation factor aIF6 K03264 EIF6; translation initiation factor 6 D CPM_1398 translation elongation factor aEF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D CPM_0372 translation elongation factor aEF-1 subunit beta K03232 EEF1B; elongation factor 1-beta D CPM_1396 translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D CPM_1838 diphthamide synthase K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D CPM_0882 predicted ATPase of PP-loop superfamily K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D CPM_1375 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D CPM_1865 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CPM_1889 peptidyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:cdiv03110] D CPM_1166 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CPM_1359 thermosome subunit alpha K22447 cct; archaeal chaperonin D CPM_0440 thermosome subunit beta K22447 cct; archaeal chaperonin D CPM_1167 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CPM_1165 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D CPM_1386 HSP20 family molecular chaperone K13993 HSP20; HSP20 family protein D CPM_0924 chaperonin Hsp20 K13993 HSP20; HSP20 family protein D CPM_0429 prefoldin subunit alpha K04797 pfdA; prefoldin alpha subunit D CPM_1079 prefoldin subunit beta K04798 pfdB; prefoldin beta subunit D CPM_1476 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CPM_0859 thiol-disulfide isomerase or thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cdiv04131] D CPM_1341 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPM_1373 CDC48 family ATPase of the AAA+ class K13525 VCP; transitional endoplasmic reticulum ATPase D CPM_0625 ArsA family efflux pump ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CPM_0189 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D CPM_0538 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D CPM_0661 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPM_1477 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPM_1398 translation elongation factor aEF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:cdiv04121] D CPM_1381 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D CPM_1270 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 03051 Proteasome [BR:cdiv03051] D CPM_0246 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D CPM_1136 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03032 DNA replication proteins [BR:cdiv03032] D CPM_0408 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D CPM_0816 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CPM_0455 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D CPM_1530 H/ACA RNA-protein site-specific pseudouridylation complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D CPM_1686 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CPM_1721 Orc1/Cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D CPM_1759 Orc1/Cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D CPM_1447 Orc1/Cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D CPM_1489 DNA replication licensing factor MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D CPM_0887 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D CPM_0730 DNA primase large subunit K18882 priL; DNA primase large subunit D CPM_0243 DNA replication initiation complex subunit, GINS15 family K09723 ginS; DNA replication factor GINS D CPM_0282 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CPM_1722 family B DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D CPM_0484 family B DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D CPM_0025 family D DNA polymerase large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D CPM_0598 family D DNA polymerase small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D CPM_0437 replication factor C large subunit K04800 rfcL; replication factor C large subunit D CPM_1739 replication factor C small subunit K04801 rfcS; replication factor C small subunit D CPM_0468 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0587 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0589 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPM_0588 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPM_1527 DNA topoisomerase VI subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D CPM_1528 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D CPM_0001 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cdiv03036] D CPM_0821 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CPM_0820 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D CPM_0825 chromosome segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CPM_0841 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CPM_1903 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CPM_1755 ParA family chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D CPM_0279 integrase K04763 xerD; integrase/recombinase XerD D CPM_0693 integrase K04763 xerD; integrase/recombinase XerD D CPM_1224 integrase K04763 xerD; integrase/recombinase XerD D CPM_1883 chromosome partitioning ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:cdiv03400] D CPM_0953 methylated DNA-protein cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CPM_0275 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CPM_0325 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CPM_0408 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D CPM_0816 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CPM_0455 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D CPM_0284 nucleotide excision repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CPM_1809 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CPM_1597 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CPM_1411 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CPM_1685 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPM_0528 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPM_1319 single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPM_0775 UvrD helicase/Cas4 nuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPM_0468 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0587 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0645 chromosome segregation ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D CPM_0646 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D CPM_1605 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D CPM_0302 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D CPM_0815 recombination mediator RadB K04484 radB; DNA repair protein RadB D CPM_0363 ski2-like helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D CPM_0589 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPM_0588 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPM_0001 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CPM_1274 Lhr-like helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CPM_1116 Lhr-like helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CPM_1941 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPM_0245 predicted DNA repair protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:cdiv03029] D CPM_1561 ribonuclease P protein subunit aPop4 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D CPM_0817 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPM_1328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPM_0298 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPM_1729 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPM_1660 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CPM_1166 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CPM_1165 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D CPM_1167 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CPM_1883 chromosome partitioning ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D CPM_1309 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cdiv02000] D CPM_1814 LipidE family ABC transporter ATPase and permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CPM_1793 NitT family ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CPM_1792 NitT family ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CPM_1246 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1365 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1615 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1638 CUT1 family ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CPM_1618 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CPM_1617 CUT1 family ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CPM_1616 CUT1 family ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CPM_0847 CUT1 family ABC transporter substrate-binding component K17311 treS; trehalose transport system substrate-binding protein D CPM_0844 CUT1 family ABC transporter permease K17312 treT; trehalose transport system permease protein D CPM_0845 CUT1 family ABC transporter permease K17313 treU; trehalose transport system permease protein D CPM_0846 CUT1 family ABC transporter ATPase K17314 treV; trehalose transport system ATP-binding protein D CPM_1249 CUT1 family ABC transporter substrate-binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CPM_1363 CUT1 family ABC transporter substrate-binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CPM_1641 CUT1 family ABC transporter substrate-binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CPM_1364 CUT1 family ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CPM_1248 CUT1 family ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CPM_1640 CUT1 family ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CPM_1247 CUT1 family ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D CPM_1639 CUT1 family ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D CPM_0123 PepT family ABC transporter substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPM_0932 PepT family ABC transporter substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPM_0124 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_0933 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_0307 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_1818 PepT family ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPM_0125 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_0934 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_1819 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_0308 PepT family ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPM_0126 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_0936 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_1820 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_0309 PepT family ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPM_1120 FeCT family ABC transporter substrate-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CPM_0453 FeCT family ABC transporter substrate-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CPM_1119 FeCT family ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CPM_1118 FeCT family ABC transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CPM_1070 ABC2-1 family ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_0170 ABC2-1 family ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_0915 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_1846 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_0715 DrugE1 family ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_0060 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_0769 DrugE1 family ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_1253 ABC2-1 family ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CPM_1071 ABC2-1 family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_1252 ABC2-1 family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0171 ABC2-1 family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0421 SkfA-E family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0890 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0914 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_1829 Gld family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_1845 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0716 DrugE1 family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0262 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0514 Pep5E family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0061 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0981 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0770 DrugE1 family ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CPM_0640 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D CPM_1923 OFA family major facilitator superfamily permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D CPM_0135 phosphate:H+ symporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D CPM_0136 phosphate:H+ symporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D CPM_1101 Fsr family major facilitator superfamily permease K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D CPM_0132 major facilitator superfamily permease K08222 yqgE; MFS transporter, YQGE family, putative transporter D CPM_0727 SP family major facilitator superfamily permease K08368 yaaU; MFS transporter, putative metabolite transport protein D CPM_1679 SP family major facilitator superfamily permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CPM_0479 SP family major facilitator superfamily permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CPM_1937 VIC family potassium channel K10716 kch; voltage-gated potassium channel D CPM_0684 Amt family transporter K03320 amt; ammonium transporter, Amt family D CPM_1339 CaCA family Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter D CPM_0709 CPA1 family antiporter K11105 cvrA; potassium/hydrogen antiporter D CPM_0864 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family D CPM_0625 ArsA family efflux pump ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CPM_1824 ArsB family efflux pump permease K03893 arsB; arsenical pump membrane protein D CPM_0017 ferritin-like domain containing protein K22736 VIT; vacuolar iron transporter family protein D CPM_0393 NAAT family transporter K05595 marC; multiple antibiotic resistance protein D CPM_0416 NAAT family transporter K05595 marC; multiple antibiotic resistance protein C 02044 Secretion system [BR:cdiv02044] D CPM_0710 type II secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D CPM_0713 type II secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D CPM_0712 flagellar assembly protein J1 K07333 flaJ; archaeal flagellar protein FlaJ D CPM_0711 flagellar assembly protein J2 K07333 flaJ; archaeal flagellar protein FlaJ D CPM_1384 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CPM_1546 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPM_0327 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPM_0428 signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D CPM_0189 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D CPM_1692 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CPM_1693 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins [BR:cdiv02035] D CPM_0710 type II secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D CPM_0713 type II secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D CPM_0712 flagellar assembly protein J1 K07333 flaJ; archaeal flagellar protein FlaJ D CPM_0711 flagellar assembly protein J2 K07333 flaJ; archaeal flagellar protein FlaJ C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cdiv04812] D CPM_0841 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CPM_1903 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CPM_1755 ParA family chromosome partitioning ATPase K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:cdiv04147] D CPM_1290 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPM_0430 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CPM_1477 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPM_1688 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CPM_1398 translation elongation factor aEF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D CPM_1396 translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D CPM_1166 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CPM_0816 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CPM_0511 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CPM_1270 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D CPM_1373 CDC48 family ATPase of the AAA+ class K13525 VCP; transitional endoplasmic reticulum ATPase D CPM_0181 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CPM_1104 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CPM_0195 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0852 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_1362 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CPM_0368 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CPM_1545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPM_0541 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CPM_0542 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CPM_1882 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CPM_1895 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CPM_0401 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CPM_0799 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D CPM_0956 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CPM_0005 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CPM_0219 2-oxoacid dehydrogenase multienzyme complex, dihydrolipoamide dehydrogenase (E3) component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_0087 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPM_1623 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CPM_1872 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D CPM_0162 electron transfer flavoprotein subunit alpha/beta K03522 fixB; electron transfer flavoprotein alpha subunit D CPM_1207 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CPM_1578 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CPM_0661 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cdiv02048] D CPM_1605 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D CPM_1604 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D CPM_1607 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CPM_0818 CRISPR-associated protein Cas4, RecB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CPM_1606 CRISPR-associated endonuclease Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CPM_1611 CRISPR-associated pre-crRNA processing enzyme Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CPM_1610 CRISPR-associated protein crRNA-binding Cas8b K19114 csh1; CRISPR-associated protein Csh1 D CPM_1609 CRISPR-associated pre-crRNA-binding protein Cas7 K19115 csh2; CRISPR-associated protein Csh2 D CPM_1608 CRISPR-associated crRNA-binding protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h D CPM_0468 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0587 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CPM_0560 type IIS restriction-modification system N6 adenine-specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CPM_0054 type III restriction protein subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D CPM_0053 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CPM_0320 MazF toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CPM_0097 RelE toxin K06218 relE; mRNA interferase RelE/StbE D CPM_1774 RelE toxin K06218 relE; mRNA interferase RelE/StbE D CPM_1782 RelE toxin K06218 relE; mRNA interferase RelE/StbE D CPM_0841 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CPM_1903 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CPM_1095 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPM_1890 rRNA maturation endonuclease Nob1 K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cdiv01504] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cdiv03100] D CPM_1741 tRNA_Ala(CGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPM_0050 tRNA_Ala(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPM_0714 tRNA_Ala(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPM_0407 tRNA_Arg(CCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_0891 tRNA_Arg(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1068 tRNA_Arg(GCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1077 tRNA_Arg(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1348 tRNA_Arg(TCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPM_1237 tRNA_Asn(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CPM_1261 tRNA_Asp(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CPM_0272 tRNA_Gln(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPM_0700 tRNA_Gln(CTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPM_0685 tRNA_Glu(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CPM_1209 tRNA_Gly(CCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPM_0724 tRNA_Gly(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPM_0726 tRNA_His(GTG); tRNA-His K14226 tRNA-His; tRNA His D CPM_0224 tRNA_Ile(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CPM_0875 tRNA_Leu(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_0630 tRNA_Leu(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_1936 tRNA_Leu(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_0885 tRNA_Leu(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPM_1579 tRNA_Lys(CTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPM_1518 tRNA_Lys(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPM_1239 tRNA_Ile(CAT); tRNA-Ile K14230 tRNA-Met; tRNA Met D CPM_1509 tRNA_iMet(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met D CPM_1400 tRNA_Met(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met D CPM_0268 tRNA_Phe(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CPM_1470 tRNA_Pro(GGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPM_1803 tRNA_Pro(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPM_1437 tRNA_Pro(CGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPM_1832 tRNA_Ser(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_0248 tRNA_Ser(CGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_1103 tRNA_Ser(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_0434 tRNA_Ser(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPM_0530 tRNA_Thr(CGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPM_1910 tRNA_Thr(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPM_1106 tRNA_Thr(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPM_1200 tRNA_Tyr(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CPM_0154 tRNA_Val(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val D CPM_0681 tRNA_Val(CAC); tRNA-Val K14237 tRNA-Val; tRNA Val D CPM_0577 tRNA_Val(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val D CPM_0188 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CPM_1884 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CPM_1087 ffs; archaeal signal recognition particle RNA K01983 ffs; SRP RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CPM_1062 aldo/keto reductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D CPM_0100 indolepyruvate oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D CPM_0099 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D CPM_1463 pyrroloquinoline-quinone synthase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CPM_1626 flavin-dependent dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D CPM_1150 NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D CPM_1234 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CPM_1233 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CPM_0193 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CPM_1420 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CPM_0883 peroxiredoxin K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25] D CPM_1673 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CPM_0586 heavy metal reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CPM_1825 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CPM_1325 molybdenum cofactor biosynthesis protein A K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D CPM_1169 hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D CPM_1173 hydrogenase 4 membrane component (E) K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D CPM_1172 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D CPM_1291 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D CPM_0662 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D CPM_0433 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CPM_0264 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D CPM_0742 archaeosine tRNA-ribosyltransferase K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-] D CPM_1176 radical SAM superfamily enzyme K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D CPM_0358 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D CPM_1367 thioesterase superfamily enzyme K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CPM_0032 N-glycosylase/DNA lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CPM_1526 carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CPM_1206 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CPM_1282 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CPM_0747 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CPM_1894 predicted sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] C 99981 Carbohydrate metabolism D CPM_0296 DNA-binding protein, stimulates sugar fermentation K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D CPM_0644 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D CPM_1873 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D CPM_1625 4Fe-4S ferredoxin K03855 fixX; ferredoxin like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism D CPM_1414 chromate reductase, Class I, flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D CPM_1314 XRE family transcriptional regulator K03627 MBF1; putative transcription factor D CPM_0627 DNA/RNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D CPM_1351 LSm family RNA-binding protein K04796 RUXX; small nuclear ribonucleoprotein D CPM_1538 LSm family RNA-binding protein K04796 RUXX; small nuclear ribonucleoprotein C 99974 Translation D CPM_0338 predicted RNA-binding protein K07572 K07572; putative nucleotide binding protein D CPM_0415 mRNA 3'-end processing factor K07577 K07577; putative mRNA 3-end processing factor D CPM_1353 methyltransferase K07579 K07579; putative methylase D CPM_0373 predicted Zn-ribbon RNA-binding protein with a function in translation K07580 K07580; Zn-ribbon RNA-binding protein C 99975 Protein processing D CPM_1394 predicted redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein D CPM_0582 stomatin-specific serine protease NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D CPM_1410 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CPM_1682 endonuclease III K07457 K07457; endonuclease III related protein D CPM_1666 transformation/recombination-mediator single-stranded DNA binding protein DprA K04096 smf; DNA processing protein D CPM_1215 P4 family phage/plasmid DNA primase K06919 K06919; putative DNA primase/helicase D CPM_0611 IS3 family transposase OrfB K07497 K07497; putative transposase D CPM_0998 IS3 family transposase OrfA K07497 K07497; putative transposase D CPM_0999 IS3 family transposase OrfB K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CPM_0169 cationic amino acid major facilitator superfamily permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D CPM_1521 SSS family symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CPM_0824 NCS1 family permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth C 99993 Cell motility D CPM_1257 flagellin-like protein K23255 pilA; archaeal type IV pilus assembly protein PilA D CPM_0800 hypothetical protein K23255 pilA; archaeal type IV pilus assembly protein PilA C 99995 Signaling proteins D CPM_1897 DNA-binding protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D CPM_1289 carbonic anhydrase/acetyltransferase K02617 paaY; phenylacetic acid degradation protein D CPM_1405 PilT family ATPase K06865 K06865; ATPase D CPM_0806 HAE2 family RND superfamily transporter K06994 K06994; putative drug exporter of the RND superfamily D CPM_0884 HAE2 family RND superfamily transporter K06994 K06994; putative drug exporter of the RND superfamily D CPM_0641 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CPM_0244 predicted metal-dependent hydrolase (urease superfamily) K07049 K07049; TatD-related deoxyribonuclease D CPM_1457 multipass membrane protein K00389 yidH; putative membrane protein D CPM_0198 multipass membrane protein K08975 K08975; putative membrane protein D CPM_0379 multipass membrane protein K08979 K08979; putative membrane protein D CPM_1251 multipass membrane protein K08980 K08980; putative membrane protein D CPM_1855 multipass membrane protein K08980 K08980; putative membrane protein D CPM_0068 membrane protein K08982 K08982; putative membrane protein C 99997 Function unknown D CPM_0300 ATP-grasp superfamily enzyme K06869 K06869; uncharacterized protein D CPM_0140 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D CPM_0913 radical SAM superfamily enzyme K06871 K06871; uncharacterized protein D CPM_1086 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein D CPM_0801 thioredoxin domain protein K06888 K06888; uncharacterized protein D CPM_0247 predicted CoA-binding protein K06929 K06929; uncharacterized protein D CPM_0795 predicted DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein D CPM_0752 metallophosphoesterase superfamily enzyme K06953 K06953; uncharacterized protein D CPM_1643 Xaa-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein D CPM_1135 predicted metal-dependent RNase K07041 K07041; uncharacterized protein D CPM_0194 predicted nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein D CPM_1361 predicted nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein D CPM_1815 NAD dependent epimerase/dehydratase family enzyme K07071 K07071; uncharacterized protein D CPM_0350 TSUP family permease K07090 K07090; uncharacterized protein D CPM_0447 TSUP family permease K07090 K07090; uncharacterized protein D CPM_0537 TSUP family permease K07090 K07090; uncharacterized protein D CPM_1713 type I phosphoribosyltransferase K07101 K07101; uncharacterized protein D CPM_0303 amino acid-binding ACT domain protein K07103 K07103; uncharacterized protein D CPM_0881 radical SAM superfamily enzyme K07129 K07129; uncharacterized protein D CPM_1777 AAA ATPase K07133 K07133; uncharacterized protein D CPM_0994 predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D CPM_1529 ATP-grasp superfamily enzyme K07159 K07159; uncharacterized protein D CPM_1273 hypothetical protein K09003 K09003; uncharacterized protein D CPM_0216 DrsE family protein K09004 K09004; uncharacterized protein D CPM_0316 PIN domain and Zn ribbon protein K09122 K09122; uncharacterized protein D CPM_0892 predicted adenosine-specific kinase K09129 K09129; uncharacterized protein D CPM_1488 hypothetical protein K09148 K09148; uncharacterized protein D CPM_0967 NERD domain protein K09384 K09384; uncharacterized protein D CPM_1197 hypothetical protein K09721 K09721; uncharacterized protein D CPM_1503 hypothetical protein K09728 K09728; uncharacterized protein D CPM_0157 hypothetical protein K09730 K09730; uncharacterized protein D CPM_0786 hypothetical protein K09732 K09732; uncharacterized protein D CPM_0412 replication factor A small subunit K09746 K09746; uncharacterized protein D CPM_1912 hypothetical protein K09927 K09927; uncharacterized protein D CPM_0389 phosphate transport regulator PhoU family protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 26, 2024