+F Repair protein KO
#
DNA Repair and Recombination Proteins - Candida dubliniensis
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D CD36_46480 6-O-methylguanine-DNA methyltransferase, putative K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E CD36_86370 uracil-DNA glycosylase, mitochondrial precursor, putative K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CD36_86500 DNA repair protein, putative K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E CD36_73590 mitochondrial N-glycosylase/DNA lyase [includes: 8-oxoguanine DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase], putative K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E CD36_07730 DNA base excision repair N-glycosylase, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E CD36_86400 DNA repair protein, putative K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E CD36_09980 DNA repair (apurinic or apyrimidinic site) lyase 2, putative K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F CD36_72440 POL3; DNA polymerase III, putative K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F CD36_54360 DNA polymerase III (delta) small subunit, putative K02328 POLD2; DNA polymerase delta subunit 2
F CD36_05510 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E DNA polymerase epsilon complex
F CD36_32530 DNA polymerase epsilon, catalytic subunit, putative K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F CD36_35000 DNA polymerase epsilon subunit B, putative K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F CD36_15400 DNA polymerase epsilon subunit D, putative K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F CD36_03400 DNA polymerase II subunit C, putative K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E CD36_41670 proliferating cell nuclear antigen (PCNA), putative K04802 PCNA; proliferating cell nuclear antigen
E CD36_29920 structure-specific endonuclease, putative K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E CD36_80760 DNA ligase I, mitochondrial precursor, putative K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E CD36_28780 histidine triad (HIT) family protein, putative K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CD36_28600 histidine triad (HIT) family nucleotide-binding protein, putative K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CD36_17290 2'(3')-polynucleotidase, putative K08075 E3.1.3.32; polynucleotide 3'-phosphatase [EC:3.1.3.32]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F CD36_87540 DNA repair protein Rad4 homologue, putative K10838 XPC; xeroderma pigmentosum group C-complementing protein
F CD36_16680 UV excision repair protein, putative K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F CD36_82410 E3 ubiquitin-protein ligase complex Scf subunit, putative K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CD36_05710 cullin-family protein, putative K10609 CUL4; cullin 4
E NER4 complex
F CD36_16670 DNA repair protein, putative K15082 RAD7; DNA repair protein RAD7
F CD36_02610 DNA repair protein RAD16-homologue, putative K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F CD36_35480 DNA-directed RNA polymerase II subunit, putative K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F CD36_01460 DNA-dependent RNA polymerase II component, putative K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F CD36_45240 DNA-directed RNA polymerase II subunit, putative K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F CD36_19230 DNA-directed RNA polymerase II subunit, putative K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F CD36_12000 DNA-directed RNA polymerases I, II and III subunit, putative K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F CD36_53140 RNA polymerase subunit common to RNA polymerases I, II, and III, putative K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F CD36_01440 DNA-directed RNA polymerase II 19 kda polypeptide, putative K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F CD36_30150 DNA-directed RNA polymerase subunit common to I, II, and III, putative K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F CD36_21470 DNA-directed RNA polymerase II subunit 9, putative K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F CD36_42900 DNA-directed RNA polymerases I/II/III subunit, putative K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F CD36_00890 DNA-directed RNA polymerase II [13.6 kda] subunit, putative K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F CD36_13350 DNA-directed RNA polymerases I, II, and III minisubunit, putative K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F CD36_82410 E3 ubiquitin-protein ligase complex Scf subunit, putative K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CD36_05710 cullin-family protein, putative K10609 CUL4; cullin 4
F CD36_82760 radiation sensitive protein 28 homologue, putative K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F CD36_33570 ATP-dependent helicase, putative K10841 ERCC6; DNA excision repair protein ERCC-6
F CD36_31290 transcription elongation factor, putative K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E CD36_28050 DNA repair helicase, putative K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E CD36_70260 5' to 3' DNA helicase, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E CD36_43750 RNA polymerase II transcription factor B subunit, putative K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E CD36_16350 TFIIH subunit, putative K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E CD36_60550 RNA polymerase II transcription factor B subunit 4, putative K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E CD36_30910 TFIIH subunit, putative K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E CD36_06280 serine/threonine protein kinase (stpk), putative K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E CD36_01660 cyclin, putative K06634 CCNH; cyclin H
E CD36_50690 RNA polymerase II transcription factor B subunit, putative K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E CD36_15350 replication factor-A protein 1, putative K07466 RFA1; replication factor A1
E CD36_21400 replication factor A protein 2, putative K10739 RFA2; replication factor A2
E CD36_09110 hypothetical protein K10740 RPA3; replication factor A3
D Other NER factors
E CD36_71840 DNA repair protein, putative K10847 XPA; DNA-repair protein complementing XP-A cells
E CD36_05480 DNA excision-repair protein, putative K10849 ERCC1; DNA excision repair protein ERCC-1
E CD36_24450 DNA repair protein Rad1 homologue, putative K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E CD36_43380 DNA-repair protein RAD2 orthologue, putative K10846 ERCC5; DNA excision repair protein ERCC-5
E CD36_80760 DNA ligase I, mitochondrial precursor, putative K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CD36_81370 DNA repair and TFIIH regulator, putative K15075 MET18; DNA repair/transcription protein MET18/MMS19
E CD36_25510 hypothetical protein K03869 CUL3; cullin 3
E CD36_04290 elongin C, putative K03872 ELOC; elongin-C
E CD36_03550 hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E CD36_46590 DNA mismatch repair protein MSH2, putative K08735 MSH2; DNA mismatch repair protein MSH2
E CD36_22850 MutS protein homolog, putative K08736 MSH3; DNA mismatch repair protein MSH3
E CD36_12230 mismatch DNA repair protein, MutS homologue, putative K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E CD36_40840 DNA mismatch repair protein, putative K08734 MLH1; DNA mismatch repair protein MLH1
E CD36_23570 DNA mismatch repair protein, putative K10858 PMS2; DNA mismatch repair protein PMS2
E CD36_13360 DNA mismatch repair protein (MutL homologue), putative K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E CD36_72440 POL3; DNA polymerase III, putative K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E CD36_54360 DNA polymerase III (delta) small subunit, putative K02328 POLD2; DNA polymerase delta subunit 2
E CD36_05510 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
D RPA (replication factor A)
E CD36_15350 replication factor-A protein 1, putative K07466 RFA1; replication factor A1
E CD36_21400 replication factor A protein 2, putative K10739 RFA2; replication factor A2
E CD36_09110 hypothetical protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E CD36_20230 replication factor C subunit, putative K10754 RFC1; replication factor C subunit 1
E CD36_70760 replication factor C subunit, putative K10755 RFC2_4; replication factor C subunit 2/4
E CD36_35490 replication factor C subunit, putative K10755 RFC2_4; replication factor C subunit 2/4
E CD36_15890 activator 1 40 kda subunit, putative K10756 RFC3_5; replication factor C subunit 3/5
E CD36_53720 AAA ATPase family member, putative K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E CD36_41670 proliferating cell nuclear antigen (PCNA), putative K04802 PCNA; proliferating cell nuclear antigen
E CD36_50630 exodeoxyribonuclease, putative K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E CD36_80760 DNA ligase I, mitochondrial precursor, putative K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CD36_71110 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E CD36_71170 manganese-dependent, structurally specific endonuclease/3'-5' exonuclease, putative K10865 MRE11; double-strand break repair protein MRE11
E CD36_81990 DNA repair protein Rad50 homologue, putative K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E CD36_71170 manganese-dependent, structurally specific endonuclease/3'-5' exonuclease, putative K10865 MRE11; double-strand break repair protein MRE11
E CD36_81990 DNA repair protein Rad50 homologue, putative K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E CD36_27150 DNA repair protein rad51 homologue, putative K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E CD36_27150 DNA repair protein rad51 homologue, putative K04482 RAD51; DNA repair protein RAD51
E CD36_22290 DNA repair protein, putative K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E CD36_60440 RAD52; DNA repair and recombination protein, putative K10873 RAD52; DNA repair and recombination protein RAD52
E CD36_44930 DNA repair and recombination protein, putative K10959 RAD59; DNA repair protein RAD59
D Rad54 family proteins
E CD36_12640 SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E CD36_24530 dna repair and recombination protein rdh54, putative K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E CD36_24760 ATP-dependent helicase, putative K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E CD36_24760 ATP-dependent helicase, putative K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CD36_84700 DNA topoisomerase III, putative K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CD36_24460 RecQ-mediated genome instability protein 1 homologue, putative K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E CD36_15350 replication factor-A protein 1, putative K07466 RFA1; replication factor A1
E CD36_21400 replication factor A protein 2, putative K10739 RFA2; replication factor A2
E CD36_09110 hypothetical protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E CD36_29030 serine/threonine-protein phosphatase catalytic subunit, putative K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E CD36_02130 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E CD36_28220 structural maintenance of chromosomes protein, putative K22803 SMC5; structural maintenance of chromosomes protein 5
E CD36_71410 DNA repair protein, putative K22804 SMC6; structural maintenance of chromosomes protein 6
E CD36_54400 DNA repair protein, putative K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E CD36_86280 SUMO-protein ligase, putative K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E CD36_43020 DNA repair protein, putative K22823 NSMCE3; non-structural maintenance of chromosomes element 3
E CD36_40850 non-structural maintenance of chromosome element, putative K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E CD36_60720 DNA recombination and repair protein, putative K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E CD36_60470 DNA repair protein, putative K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E CD36_46350 26S proteasome complex subunit, putative K10881 SHFM1; 26 proteasome complex subunit DSS1
E CD36_07500 hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3
E CD36_30930 hypothetical protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E CD36_50260 DNA replication structure-specific endonuclease subunit, putative K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E CD36_42550 hypothetical protein K15079 SLX4; structure-specific endonuclease subunit SLX4
E CD36_30560 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E CD36_22410 acetyltransferase complex component, putative K11339 MORF4L1; mortality factor 4-like protein 1
E CD36_34970 ATPase of the AAA family, putative K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E CD36_82950 uncharacterized protein yhr134w homologue, putative K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E CD36_45720 ATP-dependent RNA helicase, helicase K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
E CD36_25530 hypothetical protein K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E CD36_11090 Yeast KU70 protein homologue, putative K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E CD36_28540 high affinity DNA-binding factor subunit, putative K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E CD36_71170 manganese-dependent, structurally specific endonuclease/3'-5' exonuclease, putative K10865 MRE11; double-strand break repair protein MRE11
E CD36_81990 DNA repair protein Rad50 homologue, putative K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E CD36_17800 CaLIG4; dna ligase, putative K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
D Other NHEJ factors
E CD36_28780 histidine triad (HIT) family protein, putative K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CD36_28600 histidine triad (HIT) family nucleotide-binding protein, putative K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CD36_24580 DNA cross-link repair protein, putative K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E CD36_12020 hypothetical protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E CD36_24760 ATP-dependent helicase, putative K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CD36_84700 DNA topoisomerase III, putative K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CD36_24460 RecQ-mediated genome instability protein 1 homologue, putative K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E CD36_27150 DNA repair protein rad51 homologue, putative K04482 RAD51; DNA repair protein RAD51
E CD36_70420 telomere length regulation protein, putative K11137 TELO2; telomere length regulation protein
E CD36_12010 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E CD36_71110 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D CD36_18270 DNA polymerase eta, putative K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D CD36_45570 DNA repair protein, putative K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D CD36_86010 DNA polymerase zeta catalytic subunit, putative K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
D CD36_23580 processivity subunit of DNA polymerase zeta, putative K03508 POLZ2; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D CD36_73560 radiation sensitivity protein, putative K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D CD36_61890 postreplication repair E3 ubiquitin-protein ligase, putative K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D CD36_15320 RAD5; DNA repair protein, putative K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D CD36_11830 ubiquitin-conjugating enzyme variant MMS2 homologue, putative K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D CD36_50560 ubiquitin-conjugating enzyme, putative K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D CD36_41670 proliferating cell nuclear antigen (PCNA), putative K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D CD36_65610 DNA damage checkpoint control protein, putative K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D CD36_42580 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D CD36_70760 replication factor C subunit, putative K10755 RFC2_4; replication factor C subunit 2/4
D CD36_35490 replication factor C subunit, putative K10755 RFC2_4; replication factor C subunit 2/4
D CD36_15890 activator 1 40 kda subunit, putative K10756 RFC3_5; replication factor C subunit 3/5
D CD36_53720 AAA ATPase family member, putative K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D CD36_65610 DNA damage checkpoint control protein, putative K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D CD36_20610 hypothetical protein K02544 MEC3; G2-specific checkpoint protein
D CD36_82520 DNA damage checkpoint protein, putative K06663 DDC1; DNA damage checkpoint protein
C FPC (fork protection complex)
D CD36_50890 replication-pausing checkpoint complex subunit, putative K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D CD36_20530 chromosome segregation/replication protein, putative K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D CD36_10730 DNA replication checkpoint mediator, putative K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D CD36_70420 telomere length regulation protein, putative K11137 TELO2; telomere length regulation protein
D CD36_03390 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D CD36_52030 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D CD36_63010 DNA-damage checkpoint kinase, putative K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D CD36_54700 DNA damage response protein kinase, putative K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D CD36_80730 M-phase inducer phosphatase, putative K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D CD36_03020 14-3-3 protein, minor isoform, putative K06630 YWHAE; 14-3-3 protein epsilon
D CD36_83790 serine/threonine-protein kinase Rad53 homologue, putative K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
D CD36_52380 DNA repair protein Rad9 homologue, putative K06661 RAD9; DNA repair protein RAD9
D CD36_53760 DNA-damage checkpoint kinase, ATR homologue, putative K02543 MEC1; cell cycle checkpoint protein MEC1
D CD36_16760 negative regulator of exit from mitosis, putative K15081 AMN1; antagonist of mitotic exit network protein 1
D CD36_09410 protein kinase, putative K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D CD36_80620 fork head protein, putative K24664 FKH; forkhead protein FKH
D CD36_52880 AAA ATPase involved in endosome to vacuole transport, putative K12196 VPS4; vacuolar protein-sorting-associated protein 4
B Other factors with a suspected DNA repair function
C DNA polymerases
D CD36_63950 DNA polymerase V, putative K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D CD36_02230 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D CD36_28710 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
C Helicases
C PSO4 complex
D CD36_87390 pre-mRNA-processing factor, putative K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D CD36_08840 polo-like inase, putative K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D CD36_80460 pre-mRNA-splicing factor, putative K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D CD36_03910 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CD36_01230 deoxyuridine 5'-triphosphate nucleotidohydrolase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CD36_17930 ribonucleoside-diphosphate reductase large chain 1, putative K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D CD36_30920 ribonucleoside-diphosphate reductase, large subunit, putative K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D CD36_17780 ribonucleoside-diphosphate reductase small chain 1, putative K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D CD36_21850 ribonucleoside diphosphate reductase, putative K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D CD36_46480 6-O-methylguanine-DNA methyltransferase, putative K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E CD36_86370 uracil-DNA glycosylase, mitochondrial precursor, putative K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CD36_22560 3-methyladenine DNA glycosidase, putative K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E CD36_61950 formamidopyrimidine-DNA glycosylase, putative K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E CD36_07730 DNA base excision repair N-glycosylase, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E CD36_84980 ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E CD36_84980 ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D CD36_03910 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CD36_01230 deoxyuridine 5'-triphosphate nucleotidohydrolase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024